Phvul.007G224400.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_PROMA (Uridylate kinase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=pyrH PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.279e-77 Identity = 119/241 (49.38%), Postives = 173/241 (71.78%), Query Frame = 1 Query: 721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRD--NNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLIDETG 1437
+ + RV+ K+SG AL GS IDP++ ++++V+ + G ++AIVVGG N F G +A G++R TA VGM+ATVMN+I LQ LE+ GV+TRVQT+I MQ+ AEPY R+RAIRHLEKGRVV+FGG G GNP F+TD +ALRA+E+NA+ + K T VDGVY+ + ++ +E ++F+E+ S+ + MD++A+ CK N IP+VVFN+ +PGNI+KA+ GE++G+ I +G
Sbjct: 1 MSYSRVLLKLSGEALMGSKPYGIDPEIVQSIAQDVSKVVQEGTQLAIVVGGGNIFRGLKGSSA-GMDRATADYVGMLATVMNAITLQDGLERAGVETRVQTAIEMQQIAEPYIRRRAIRHLEKGRVVVFGG---GCGNPFFTTDTTSALRAAEINADVIFKATKVDGVYNQDPKEYPEAIKYESLTFQEVLSKEIAVMDSTAIALCKDNKIPIVVFNIFQPGNINKAVAGEKIGSRISNSG 237
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_TRIEI (Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=pyrH PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.484e-75 Identity = 122/235 (51.91%), Postives = 165/235 (70.21%), Query Frame = 1 Query: 727 WRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFT--FEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
++RV+ K+SG AL GS IDP V +++EVA + G+++AIVVGG N F G + G++R TA VGM+ATVMN+I LQ LE++GV TRVQT+IAMQE AEPY R+RAIRHLEKGRVV+FG G+GNP F+TD AALRA+E+ AE + K T VDGVYD + N +E +S+ E+ + + MD++A+ CK N IP++VFNL GNI KA+ GE++GT++
Sbjct: 5 YQRVLLKLSGEALMGSLGYGIDPAVVQGIAQEVAEVAATGIQIAIVVGGGNIFRG-VKAASKGMDRATADYVGMIATVMNAITLQDALEQVGVPTRVQTAIAMQELAEPYIRRRAIRHLEKGRVVVFGA---GSGNPFFTTDTTAALRAAEIEAEVIFKATKVDGVYDSDPHKNQEAKRYESLSYGEVLTLDLRVMDSTAIALCKENNIPIIVFNLSVSGNICKAVMGEKIGTIV 235
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_SYNS9 (Uridylate kinase OS=Synechococcus sp. (strain CC9902) OX=316279 GN=pyrH PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 2.429e-75 Identity = 122/237 (51.48%), Postives = 166/237 (70.04%), Query Frame = 1 Query: 721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCN--SRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
+++ RV+ K+SG AL GS IDP++ ++ +VA G ++AIVVGG N F G +A G++R TA VGM+ATVMN+I LQ LE+ GV TRVQT+IAMQE AEPY R++A+RHLEKGRVV+FG G GNP F+TD AALRA+E+NA+ V K T VDGVYD + + +H+S++++ S + MDA+A++ CK N IP+VVF+L EPGNI KA+ GE +G+ I
Sbjct: 1 MKYTRVLLKLSGEALMGSQGYGIDPEIVHSIAEDVAKVVASGTQLAIVVGGGNIFRGLKG-SAAGMDRATADYVGMLATVMNAITLQDGLERAGVPTRVQTAIAMQEVAEPYIRRKAMRHLEKGRVVVFGA---GCGNPFFTTDTTAALRAAEINADVVFKATKVDGVYDKDPAKHPDAVKHDHLSYQDVLSGELGVMDATAISLCKENNIPIVVFDLFEPGNIGKAVAGEPIGSRI 233
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_ANAVT (Uridylate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=pyrH PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 2.486e-75 Identity = 123/240 (51.25%), Postives = 168/240 (70.00%), Query Frame = 1 Query: 727 WRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCN-------SRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
+RRV+ K+SG AL G+ IDP+V +++E+A GV++AIVVGG N F G +A G++R TA +GM+ATVMN++ LQ +LE++GVQTRVQT+IAMQE AEPY R+RAIRHLEKGRVVIFG G+GNP F+TD AALRA+E++AE + K T VDGVYD + R N+ T+ H+ ++L MD++A+ CK N IP++VF+L GNI +A+ GE +GTL+
Sbjct: 5 YRRVLLKLSGEALMGNMGYGIDPEVVKEIAQEIAEVIATGVQIAIVVGGGNIFRGVKAASA-GMDRATADYIGMIATVMNAMTLQDSLERIGVQTRVQTAIAMQELAEPYIRRRAIRHLEKGRVVIFGA---GSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPEVYPNAKRYNSLTYAHVLAQDL-----RVMDSTAIALCKENNIPILVFDLTTRGNIRRAVLGESIGTLV 235
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_SYNJA (Uridylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=pyrH PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.570e-75 Identity = 117/240 (48.75%), Postives = 169/240 (70.42%), Query Frame = 1 Query: 721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFT--FEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLIDET 1434
+++RR++ K+SG AL G IDP+V ++ EVA R GV+VAIVVGG N + G A G+++ +A VGM+ATV+N++ LQ +E+ G+ TRVQT+IAMQE AEPY R+RAIRHLEKGRVVIFG G+GNP F+TD AALRA+E++AE + K T VDGVYD + + + ++ +S++++ +R + MD++A+ CK N +P+VVF+L PGNI + + GE +GT I +T
Sbjct: 1 MKYRRILLKLSGEALMGERPYGIDPEVLQSIASEVASVVRAGVQVAIVVGGGNIWRGRKEAAAQGMDQASADYVGMLATVINALTLQDAIERAGIPTRVQTAIAMQEVAEPYIRRRAIRHLEKGRVVIFGA---GSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPKTHPQARRYDVLSYQDVLTRDLRVMDSTAIALCKENQLPIVVFDLTTPGNIYRVVQGEPIGTWIGQT 237
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_NOSS1 (Uridylate kinase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=pyrH PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 2.623e-75 Identity = 123/240 (51.25%), Postives = 168/240 (70.00%), Query Frame = 1 Query: 727 WRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCN-------SRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
+RRV+ K+SG AL G+ IDP+V +++E+A GV++AIVVGG N F G +A G++R TA +GM+ATVMN++ LQ +LE++GVQTRVQT+IAMQE AEPY R+RAIRHLEKGRVVIFG G+GNP F+TD AALRA+E++AE + K T VDGVYD + R N+ T+ H+ ++L MD++A+ CK N IP++VF+L GNI +A+ GE +GTL+
Sbjct: 5 YRRVLLKLSGEALMGNMGYGIDPEVVKEIAQEIAEVIATGVQIAIVVGGGNIFRGVKAASA-GMDRATADYIGMIATVMNAMTLQDSLERIGVQTRVQTAIAMQELAEPYIRRRAIRHLEKGRVVIFGA---GSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPEIYPNAKRYNSLTYAHVLAQDL-----RVMDSTAIALCKENNIPILVFDLTTRGNIRRAVLGESIGTLV 235
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_PROM2 (Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9215) OX=93060 GN=pyrH PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.271e-74 Identity = 121/239 (50.63%), Postives = 165/239 (69.04%), Query Frame = 1 Query: 721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNF----TFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
+ ++RV+ K+SG AL G IDP + ++ +V V++AIVVGG N F G +A G++R TA VGM+ATVMN+I LQ LE++GV TRVQT+I MQE AEPY R+RA+RHLEKGRVV+FGG G GNP F+TD AALRA+E+NAE V+K T VDGVYDC+ N F + +S++ + S + MD++A+ CK N IP++VF++ + GNISKA+ GE +G+LI
Sbjct: 1 MTYKRVLLKLSGEALMGEKPYGIDPAIVQSIAEDVLKVVEKNVQLAIVVGGGNIFRGLKG-SADGMDRATADYVGMLATVMNAISLQDGLERVGVATRVQTAIEMQEIAEPYIRRRAMRHLEKGRVVVFGG---GCGNPFFTTDTTAALRAAEINAEVVMKATKVDGVYDCDP--NQFKDAKKYSSLSYQRVLSDEIAVMDSTAIALCKDNNIPIMVFDIFKKGNISKAVAGEPIGSLI 233
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_SYNR3 (Uridylate kinase OS=Synechococcus sp. (strain RCC307) OX=316278 GN=pyrH PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 6.378e-74 Identity = 122/237 (51.48%), Postives = 164/237 (69.20%), Query Frame = 1 Query: 721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSR--DNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
+ ++RV+ K+SG AL G IDP + ++++VA G ++AIVVGG N F G +A G+ER TA VGM+ATVMN+I LQ LE+ GV TRVQ++IAMQE AEPY R++A+RHLEKGRVVIFG G GNP F+TD AALRA+E+NA VLK T VDGVYD + + +EH++F+++ + + MDA+A+ CK N IP+VVF+L GNIS+A+ GE +GT I
Sbjct: 1 MAYQRVLLKLSGEALMGDQGYGIDPAIVSAIAKDVAEVVAKGTQLAIVVGGGNIFRGLKG-SAAGMERATADYVGMLATVMNAITLQDGLERAGVPTRVQSAIAMQEVAEPYIRRKAMRHLEKGRVVIFGA---GCGNPFFTTDTTAALRAAEINAHVVLKATKVDGVYDKDPVRFPDAVRYEHLTFQDVLANELGVMDATAIALCKDNTIPIVVFDLFGSGNISRAVAGEPIGTRI 233
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_PROMT (Uridylate kinase OS=Prochlorococcus marinus (strain NATL2A) OX=59920 GN=pyrH PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 6.517e-74 Identity = 116/237 (48.95%), Postives = 166/237 (70.04%), Query Frame = 1 Query: 721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRD--NNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
+ + R + K+SG AL G IDP++ ++++V+ G ++AIVVGG N F G +A G++R TA VGM+ATVMN+I LQ LE+ GV TRVQ++I MQ+ AEPY R+RAIRHLEKGRVV+FGG G GNP F+TD AALRA+E+NAE V K T VDGVYD + + + +++++F+++ + + MD++A+ CK N IP+VVFN+ +PGNI+KA+ GE +G+ I
Sbjct: 1 MTYSRALIKLSGEALMGDKPYGIDPEIVQSIAKDVSKVVENGTQIAIVVGGGNIFRGLKG-SAAGMDRATADYVGMLATVMNAITLQDGLERAGVPTRVQSAIDMQQIAEPYIRRRAIRHLEKGRVVVFGG---GCGNPFFTTDTTAALRAAEINAEVVFKATKVDGVYDRDPKKFTDAVKYDNLTFQDVLANEIGVMDSTAIALCKDNKIPIVVFNIFQPGNIAKAISGEPIGSRI 233
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_PROM1 (Uridylate kinase OS=Prochlorococcus marinus (strain NATL1A) OX=167555 GN=pyrH PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 6.517e-74 Identity = 116/237 (48.95%), Postives = 166/237 (70.04%), Query Frame = 1 Query: 721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRD--NNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
+ + R + K+SG AL G IDP++ ++++V+ G ++AIVVGG N F G +A G++R TA VGM+ATVMN+I LQ LE+ GV TRVQ++I MQ+ AEPY R+RAIRHLEKGRVV+FGG G GNP F+TD AALRA+E+NAE V K T VDGVYD + + + +++++F+++ + + MD++A+ CK N IP+VVFN+ +PGNI+KA+ GE +G+ I
Sbjct: 1 MTYSRALIKLSGEALMGDKPYGIDPEIVQSIAKDVSKVVENGTQIAIVVGGGNIFRGLKG-SAAGMDRATADYVGMLATVMNAITLQDGLERAGVPTRVQSAIDMQQIAEPYIRRRAIRHLEKGRVVVFGG---GCGNPFFTTDTTAALRAAEINAEVVFKATKVDGVYDRDPKKFTDAVKYDNLTFQDVLANEIGVMDSTAIALCKDNKIPIVVFNIFQPGNIAKAISGEPIGSRI 233 The following BLAST results are available for this feature:
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.007G224400.1_Pv_G19833_v2.1 >Phvul.007G224400.1_Pv_G19833_v2.1 ID=Phvul.007G224400.1_Pv_G19833_v2.1; Name=Phvul.007G224400.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=483bpback to top mRNA from alignment at Chr07:34800958..34805489- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.007G224400.1_Pv_G19833_v2.1 ID=Phvul.007G224400.1_Pv_G19833_v2.1; Name=Phvul.007G224400.1; organism=Phaseolus vulgaris; type=mRNA; length=4532bp; location=Sequence derived from: Chr07:34800958..34805489- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr07:34800958..34805489- >Phvul.007G224400.1_Pv_G19833_v2.1 ID=Phvul.007G224400.1_Pv_G19833_v2.1; Name=Phvul.007G224400.1; organism=Phaseolus vulgaris; type=CDS; length=1449bp; location=Sequence derived from: Chr07:34800958..34805489- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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