Phvul.007G224400.1

Transcript Overview
NamePhvul.007G224400.1
Unique NamePhvul.007G224400.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr07supercontigChr07:34800958..34805489 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL033Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL119Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL237Pisum sativum Cameor genome v1aPisum sativum
pspvL241Pisum sativum Cameor genome v1aPisum sativum
pspvL647Pisum sativum Cameor genome v1aPisum sativum
pspvL673Pisum sativum Cameor genome v1aPisum sativum
pvvuR580Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR627Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0313Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0481Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL287Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL406Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL248Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL389Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0465Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0768Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0921Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0808Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1047Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1395Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL169Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL463Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR547Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR603Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR638Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR676Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR627Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR664Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR552Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR571Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR510Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR551Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR694Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR726Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL078Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL234Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL358Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL103Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL428Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL517Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL080Cicer arietinum
carpvL241Cicer arietinum
carpvL371Cicer arietinum
carpvL615Cicer arietinum
ccapvL147Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL322Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL400Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL497Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR643Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR716Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR665Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR723Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR672Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR691Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR676Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR692Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR535Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR570Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR535Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR578Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.007G224400Phvul.007G224400_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G224400.1Phvul.007G224400.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.007G224400.1_Pv_G19833_v2.1Phvul.007G224400.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G224400.1.v2.1.CDS.7Phvul.007G224400.1.v2.1.CDS.7_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G224400.1.v2.1.CDS.6Phvul.007G224400.1.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G224400.1.v2.1.CDS.5Phvul.007G224400.1.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G224400.1.v2.1.CDS.4Phvul.007G224400.1.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G224400.1.v2.1.CDS.3Phvul.007G224400.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G224400.1.v2.1.CDS.2Phvul.007G224400.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G224400.1.v2.1.CDS.1Phvul.007G224400.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G224400.1.v2.1.three_prime_UTR.1Phvul.007G224400.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G224400.1.v2.1.five_prime_UTR.1Phvul.007G224400.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


Homology
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_PROMA (Uridylate kinase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=pyrH PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.279e-77
Identity = 119/241 (49.38%), Postives = 173/241 (71.78%), Query Frame = 1
Query:  721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRD--NNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLIDETG 1437
            + + RV+ K+SG AL GS    IDP++   ++++V+   + G ++AIVVGG N F G    +A G++R TA  VGM+ATVMN+I LQ  LE+ GV+TRVQT+I MQ+ AEPY R+RAIRHLEKGRVV+FGG   G GNP F+TD  +ALRA+E+NA+ + K T VDGVY+ + ++      +E ++F+E+ S+ +  MD++A+  CK N IP+VVFN+ +PGNI+KA+ GE++G+ I  +G
Sbjct:    1 MSYSRVLLKLSGEALMGSKPYGIDPEIVQSIAQDVSKVVQEGTQLAIVVGGGNIFRGLKGSSA-GMDRATADYVGMLATVMNAITLQDGLERAGVETRVQTAIEMQQIAEPYIRRRAIRHLEKGRVVVFGG---GCGNPFFTTDTTSALRAAEINADVIFKATKVDGVYNQDPKEYPEAIKYESLTFQEVLSKEIAVMDSTAIALCKDNKIPIVVFNIFQPGNINKAVAGEKIGSRISNSG 237          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_TRIEI (Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=pyrH PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.484e-75
Identity = 122/235 (51.91%), Postives = 165/235 (70.21%), Query Frame = 1
Query:  727 WRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFT--FEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
            ++RV+ K+SG AL GS    IDP V   +++EVA  +  G+++AIVVGG N F G     + G++R TA  VGM+ATVMN+I LQ  LE++GV TRVQT+IAMQE AEPY R+RAIRHLEKGRVV+FG    G+GNP F+TD  AALRA+E+ AE + K T VDGVYD +   N     +E +S+ E+ +  +  MD++A+  CK N IP++VFNL   GNI KA+ GE++GT++
Sbjct:    5 YQRVLLKLSGEALMGSLGYGIDPAVVQGIAQEVAEVAATGIQIAIVVGGGNIFRG-VKAASKGMDRATADYVGMIATVMNAITLQDALEQVGVPTRVQTAIAMQELAEPYIRRRAIRHLEKGRVVVFGA---GSGNPFFTTDTTAALRAAEIEAEVIFKATKVDGVYDSDPHKNQEAKRYESLSYGEVLTLDLRVMDSTAIALCKENNIPIIVFNLSVSGNICKAVMGEKIGTIV 235          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_SYNS9 (Uridylate kinase OS=Synechococcus sp. (strain CC9902) OX=316279 GN=pyrH PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 2.429e-75
Identity = 122/237 (51.48%), Postives = 166/237 (70.04%), Query Frame = 1
Query:  721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCN--SRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
            +++ RV+ K+SG AL GS    IDP++   ++ +VA     G ++AIVVGG N F G    +A G++R TA  VGM+ATVMN+I LQ  LE+ GV TRVQT+IAMQE AEPY R++A+RHLEKGRVV+FG    G GNP F+TD  AALRA+E+NA+ V K T VDGVYD +     +    +H+S++++ S  +  MDA+A++ CK N IP+VVF+L EPGNI KA+ GE +G+ I
Sbjct:    1 MKYTRVLLKLSGEALMGSQGYGIDPEIVHSIAEDVAKVVASGTQLAIVVGGGNIFRGLKG-SAAGMDRATADYVGMLATVMNAITLQDGLERAGVPTRVQTAIAMQEVAEPYIRRKAMRHLEKGRVVVFGA---GCGNPFFTTDTTAALRAAEINADVVFKATKVDGVYDKDPAKHPDAVKHDHLSYQDVLSGELGVMDATAISLCKENNIPIVVFDLFEPGNIGKAVAGEPIGSRI 233          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_ANAVT (Uridylate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=pyrH PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 2.486e-75
Identity = 123/240 (51.25%), Postives = 168/240 (70.00%), Query Frame = 1
Query:  727 WRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCN-------SRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
            +RRV+ K+SG AL G+    IDP+V   +++E+A     GV++AIVVGG N F G    +A G++R TA  +GM+ATVMN++ LQ +LE++GVQTRVQT+IAMQE AEPY R+RAIRHLEKGRVVIFG    G+GNP F+TD  AALRA+E++AE + K T VDGVYD +        R N+ T+ H+  ++L       MD++A+  CK N IP++VF+L   GNI +A+ GE +GTL+
Sbjct:    5 YRRVLLKLSGEALMGNMGYGIDPEVVKEIAQEIAEVIATGVQIAIVVGGGNIFRGVKAASA-GMDRATADYIGMIATVMNAMTLQDSLERIGVQTRVQTAIAMQELAEPYIRRRAIRHLEKGRVVIFGA---GSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPEVYPNAKRYNSLTYAHVLAQDL-----RVMDSTAIALCKENNIPILVFDLTTRGNIRRAVLGESIGTLV 235          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_SYNJA (Uridylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=pyrH PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.570e-75
Identity = 117/240 (48.75%), Postives = 169/240 (70.42%), Query Frame = 1
Query:  721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFT--FEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLIDET 1434
            +++RR++ K+SG AL G     IDP+V   ++ EVA   R GV+VAIVVGG N + G     A G+++ +A  VGM+ATV+N++ LQ  +E+ G+ TRVQT+IAMQE AEPY R+RAIRHLEKGRVVIFG    G+GNP F+TD  AALRA+E++AE + K T VDGVYD + + +     ++ +S++++ +R +  MD++A+  CK N +P+VVF+L  PGNI + + GE +GT I +T
Sbjct:    1 MKYRRILLKLSGEALMGERPYGIDPEVLQSIASEVASVVRAGVQVAIVVGGGNIWRGRKEAAAQGMDQASADYVGMLATVINALTLQDAIERAGIPTRVQTAIAMQEVAEPYIRRRAIRHLEKGRVVIFGA---GSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPKTHPQARRYDVLSYQDVLTRDLRVMDSTAIALCKENQLPIVVFDLTTPGNIYRVVQGEPIGTWIGQT 237          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_NOSS1 (Uridylate kinase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=pyrH PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 2.623e-75
Identity = 123/240 (51.25%), Postives = 168/240 (70.00%), Query Frame = 1
Query:  727 WRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCN-------SRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
            +RRV+ K+SG AL G+    IDP+V   +++E+A     GV++AIVVGG N F G    +A G++R TA  +GM+ATVMN++ LQ +LE++GVQTRVQT+IAMQE AEPY R+RAIRHLEKGRVVIFG    G+GNP F+TD  AALRA+E++AE + K T VDGVYD +        R N+ T+ H+  ++L       MD++A+  CK N IP++VF+L   GNI +A+ GE +GTL+
Sbjct:    5 YRRVLLKLSGEALMGNMGYGIDPEVVKEIAQEIAEVIATGVQIAIVVGGGNIFRGVKAASA-GMDRATADYIGMIATVMNAMTLQDSLERIGVQTRVQTAIAMQELAEPYIRRRAIRHLEKGRVVIFGA---GSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPEIYPNAKRYNSLTYAHVLAQDL-----RVMDSTAIALCKENNIPILVFDLTTRGNIRRAVLGESIGTLV 235          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_PROM2 (Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9215) OX=93060 GN=pyrH PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.271e-74
Identity = 121/239 (50.63%), Postives = 165/239 (69.04%), Query Frame = 1
Query:  721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNF----TFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
            + ++RV+ K+SG AL G     IDP +   ++ +V       V++AIVVGG N F G    +A G++R TA  VGM+ATVMN+I LQ  LE++GV TRVQT+I MQE AEPY R+RA+RHLEKGRVV+FGG   G GNP F+TD  AALRA+E+NAE V+K T VDGVYDC+   N F     +  +S++ + S  +  MD++A+  CK N IP++VF++ + GNISKA+ GE +G+LI
Sbjct:    1 MTYKRVLLKLSGEALMGEKPYGIDPAIVQSIAEDVLKVVEKNVQLAIVVGGGNIFRGLKG-SADGMDRATADYVGMLATVMNAISLQDGLERVGVATRVQTAIEMQEIAEPYIRRRAMRHLEKGRVVVFGG---GCGNPFFTTDTTAALRAAEINAEVVMKATKVDGVYDCDP--NQFKDAKKYSSLSYQRVLSDEIAVMDSTAIALCKDNNIPIMVFDIFKKGNISKAVAGEPIGSLI 233          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_SYNR3 (Uridylate kinase OS=Synechococcus sp. (strain RCC307) OX=316278 GN=pyrH PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 6.378e-74
Identity = 122/237 (51.48%), Postives = 164/237 (69.20%), Query Frame = 1
Query:  721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSR--DNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
            + ++RV+ K+SG AL G     IDP +   ++++VA     G ++AIVVGG N F G    +A G+ER TA  VGM+ATVMN+I LQ  LE+ GV TRVQ++IAMQE AEPY R++A+RHLEKGRVVIFG    G GNP F+TD  AALRA+E+NA  VLK T VDGVYD +     +   +EH++F+++ +  +  MDA+A+  CK N IP+VVF+L   GNIS+A+ GE +GT I
Sbjct:    1 MAYQRVLLKLSGEALMGDQGYGIDPAIVSAIAKDVAEVVAKGTQLAIVVGGGNIFRGLKG-SAAGMERATADYVGMLATVMNAITLQDGLERAGVPTRVQSAIAMQEVAEPYIRRKAMRHLEKGRVVIFGA---GCGNPFFTTDTTAALRAAEINAHVVLKATKVDGVYDKDPVRFPDAVRYEHLTFQDVLANELGVMDATAIALCKDNTIPIVVFDLFGSGNISRAVAGEPIGTRI 233          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_PROMT (Uridylate kinase OS=Prochlorococcus marinus (strain NATL2A) OX=59920 GN=pyrH PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 6.517e-74
Identity = 116/237 (48.95%), Postives = 166/237 (70.04%), Query Frame = 1
Query:  721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRD--NNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
            + + R + K+SG AL G     IDP++   ++++V+     G ++AIVVGG N F G    +A G++R TA  VGM+ATVMN+I LQ  LE+ GV TRVQ++I MQ+ AEPY R+RAIRHLEKGRVV+FGG   G GNP F+TD  AALRA+E+NAE V K T VDGVYD + +   +   +++++F+++ +  +  MD++A+  CK N IP+VVFN+ +PGNI+KA+ GE +G+ I
Sbjct:    1 MTYSRALIKLSGEALMGDKPYGIDPEIVQSIAKDVSKVVENGTQIAIVVGGGNIFRGLKG-SAAGMDRATADYVGMLATVMNAITLQDGLERAGVPTRVQSAIDMQQIAEPYIRRRAIRHLEKGRVVVFGG---GCGNPFFTTDTTAALRAAEINAEVVFKATKVDGVYDRDPKKFTDAVKYDNLTFQDVLANEIGVMDSTAIALCKDNKIPIVVFNIFQPGNIAKAISGEPIGSRI 233          
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Match: PYRH_PROM1 (Uridylate kinase OS=Prochlorococcus marinus (strain NATL1A) OX=167555 GN=pyrH PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 6.517e-74
Identity = 116/237 (48.95%), Postives = 166/237 (70.04%), Query Frame = 1
Query:  721 LRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRD--NNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLI 1425
            + + R + K+SG AL G     IDP++   ++++V+     G ++AIVVGG N F G    +A G++R TA  VGM+ATVMN+I LQ  LE+ GV TRVQ++I MQ+ AEPY R+RAIRHLEKGRVV+FGG   G GNP F+TD  AALRA+E+NAE V K T VDGVYD + +   +   +++++F+++ +  +  MD++A+  CK N IP+VVFN+ +PGNI+KA+ GE +G+ I
Sbjct:    1 MTYSRALIKLSGEALMGDKPYGIDPEIVQSIAKDVSKVVENGTQIAIVVGGGNIFRGLKG-SAAGMDRATADYVGMLATVMNAITLQDGLERAGVPTRVQSAIDMQQIAEPYIRRRAIRHLEKGRVVVFGG---GCGNPFFTTDTTAALRAAEINAEVVFKATKVDGVYDRDPKKFTDAVKYDNLTFQDVLANEIGVMDSTAIALCKDNKIPIVVFNIFQPGNIAKAISGEPIGSRI 233          
The following BLAST results are available for this feature:
BLAST of Phvul.007G224400.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PYRH_PROMA2.279e-7749.38Uridylate kinase OS=Prochlorococcus marinus (strai... [more]
PYRH_TRIEI1.484e-7551.91Uridylate kinase OS=Trichodesmium erythraeum (stra... [more]
PYRH_SYNS92.429e-7551.48Uridylate kinase OS=Synechococcus sp. (strain CC99... [more]
PYRH_ANAVT2.486e-7551.25Uridylate kinase OS=Anabaena variabilis (strain AT... [more]
PYRH_SYNJA2.570e-7548.75Uridylate kinase OS=Synechococcus sp. (strain JA-3... [more]
PYRH_NOSS12.623e-7551.25Uridylate kinase OS=Nostoc sp. (strain PCC 7120 / ... [more]
PYRH_PROM21.271e-7450.63Uridylate kinase OS=Prochlorococcus marinus (strai... [more]
PYRH_SYNR36.378e-7451.48Uridylate kinase OS=Synechococcus sp. (strain RCC3... [more]
PYRH_PROMT6.517e-7448.95Uridylate kinase OS=Prochlorococcus marinus (strai... [more]
PYRH_PROM16.517e-7448.95Uridylate kinase OS=Prochlorococcus marinus (strai... [more]
back to top
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..170
NoneNo IPR availableGENE3D1.10.10.60coord: 103..166
e-value: 4.9E-5
score: 25.2
NoneNo IPR availablePFAMPF13837Myb_DNA-bind_4coord: 100..190
e-value: 5.1E-19
score: 68.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..234
IPR036393Acetylglutamate kinase-like superfamilyGENE3D3.40.1160.10coord: 235..481
e-value: 1.9E-68
score: 232.6
IPR036393Acetylglutamate kinase-like superfamilySUPERFAMILY53633Carbamate kinase-likecoord: 242..475
IPR001048Aspartate/glutamate/uridylate kinasePFAMPF00696AA_kinasecoord: 245..455
e-value: 2.7E-25
score: 89.4
IPR015963Uridylate kinase, bacteriaHAMAPMF_01220_BPyrH_Bcoord: 241..476
score: 32.849
IPR015963Uridylate kinase, bacteriaCDDcd04254AAK_UMPK-PyrH-Eccoord: 244..476
e-value: 6.20916E-117
score: 341.007

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.007G224400.1_Pv_G19833_v2.1

>Phvul.007G224400.1_Pv_G19833_v2.1 ID=Phvul.007G224400.1_Pv_G19833_v2.1; Name=Phvul.007G224400.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=483bp
MASCDDDDDFSLLRDDNHHLHQPYAPHHHFSPSAVAVAPVPPKSVADDAE
DYGNPFDDDGGSEKRKDREEIGEGAASYGFNKRSKAPPSSTGSAEYRKDR
EEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVALVVSGRCENQSKSV
EQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKQLEQIVGNSLPAKFP
DEDKAVVSAGTSPRQSKRYGVATPSTGGQANSMRSKALTNLRWRRVVFKI
SGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAW
VTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAE
PYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVL
KGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIP
VVVFNLLEPGNISKALCGEQVGTLIDETGAVS*
back to top

mRNA from alignment at Chr07:34800958..34805489-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.007G224400.1_Pv_G19833_v2.1 ID=Phvul.007G224400.1_Pv_G19833_v2.1; Name=Phvul.007G224400.1; organism=Phaseolus vulgaris; type=mRNA; length=4532bp; location=Sequence derived from: Chr07:34800958..34805489- (Phaseolus vulgaris
GATAAGCATGGCCCGTCACCGGCAGATCCAAATTCCCCACACTCCAGGAC TAGCAAAAGCGCGTGTAATGCACTCGTTTTTGGCACTTAACGGGACCGTC ACCCGCGTGACGGCAGATACCAGACCCACTCACGGAAGGCACGCTCCGTC AAACCCTCCCACACACACCTTCTCTCAACGCCCCATTCTCTTTCCCTAAC GTCCCCGACGACGCCGTAACGTCCTCCACACCCTTATGGCCTCTTGCGAC GACGACGACGACTTCTCTCTCCTCCGTGACGATAACCACCACCTCCACCA ACCTTACGCGCCGCACCACCACTTCTCCCCCTCCGCCGTCGCCGTCGCTC CTGTCCCACCCAAATCCGTCGCCGACGACGCCGAGGACTACGGAAACCCC TTCGACGACGATGGCGGCAGTGAGAAGCGCAAGGACCGCGAGGAGATCGG CGAGGGAGCTGCGTCGTACGGATTCAACAAGAGATCTAAGGCTCCGCCGT CGAGCACAGGCAGCGCCGAGTACCGGAAGGACAGGGAGGAGTGGAGCGAC ACAGCGATCGTGTGCCTCCTCGAGGCGTACACGGAGAAGTTCACACAGCT GAATCGGGGAAACCTGAGAGGAAGAGATTGGGAGGAGGTTGCGTTGGTGG TGAGCGGACGGTGCGAGAACCAATCGAAGAGCGTGGAACAGTGTAAGAAC AAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACATAGAATGAG CAGTGGCTGCATTTCCACCAGTCACTGGCCTTGGTTCAAACAATTGGAGC AGATTGTCGGGAATTCTCTTCCGGCGAAATTTCCCGATGAGGATAAAGCG GTTGTTTCTGCCGGAACTTCGCCCAGACAATCGAAGAGGTATTATACTCA GCATTCTGCACCGTAATATTTAATATTTCTCTCATTACTTTTGCAAACGA GTATTAGTAGTTCACATTGATAGTTATTGCGTTATTATGTTCACCAGGAT TTGTTTATTTGTTTTCTGTTTTGGTTTGGTGCTCTAGTGCCTGAATCTGT TCGTTGGCTGCATTGTAAATACATAGTTTAATCTAGATGCTTGAAGATTG GAATATTGAATAGCTTTATGATATTACTTTGCAGTTCAACTGTGCAGCAT GGTATAGTCAGTAGAGTGTACAATGTTTGCTTTTGCATCATGTAGGTTTT TGTCATGTTTTTCGTGGACTAGACCTTAGAATTGGTTCTTGTAATAAATA GGGGTGTGTGGTTTGACTGAATCAGAAAACTTGTTTTCTTTGGAGGTATT GCTGCATTTTAACAAGGGTCATTCTGTATTCACTGACACGCTTTTAGTTT AGAAATATCATGTCAACTCAAAATGGTTATGGCGTTACTTCAGTTATCTG TACTGTGTTATTATCTCGATGTAGTATCCGATGGTAAATTATTTAGTGTA TTGTTGTTATGCAATGTTTCACCGTGCTTTATGTCCACCAAGGATTTGTC CATTTTTGTTTCTTAGATGTACCTTCCTTATCCTTGTACTTAATTTGTAC AGACGGTTACAACTTTTAATAATGAATTACTAGTTTACTTTTTACTACAG GAGTGCACATATTACAGTTTGTAGAATCTTAACATTAAACGGTATTGATT TTTTGTTATGTTATTTAAGTATTAGTTTGGGCTTCAGAATAGGATTTTGG AATTAGTATGGGTCTATGGTTTAACTGATGCTAAAAATTTGAAGTTCTCC AGTGTTGTTGCAAATAAGCTAATGCTATCTTCACTGGCACACTTCTGAAT CTCAAATCATATGCGGATGACATTTCCAATTTATAATGTGGGTGGTGTTA CTAGGAAGCGGGTTTTTATGCTGAATCTCATTCAATATGAATTGTTTTTC CCTTTTCTTTTCCTGATTTTTGTGATAGTGTCAAATGAATGTTAAATTTC CCCTGCTTTATTCCTAGATATGGAGTGGCAACACCCAGTACTGGTGGTCA AGCGAATAGCATGAGGTCAAAAGCACTGACAAACCTTAGATGGCGGAGGG TAGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAAC ATTGACCCTAAGGTTTGTGGTTTGGTTCCAATATGTGGGAAGTTTTATAA CATTATTTGACTCATGACCTAAGGTCTTACGGTGTAGTAATTGTTATCTA GATATTGTGACTTATTACATTTGTTTGTTTAAACTAATTATCAGGTGGCT ATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTTGAGGT ATCAGTTGTCTTGATTGTTCTCTGGGGTCTGTTATTCTGTCACCCTTTCA GTTTAGCTGAAGTATCTTGTGATATTTCAGGTGGCTATTGTTGTTGGAGG TCGTAATTTCTTCTCTGGAGATGCATGGGTAACTGCGACAGGTTTAGAAA GATGTACTGCATACCAAGTTGGGTAAGGTTAATCACCAAATTTTCTATGC AAGTTCGATTTACACCTTTGTAATTTTACTAGAGATCAATCCCAAAGAAA ATAAATTGAAAATAGATTTAGGTATCCGTGCAACCATCCATATCCTGATA AAAAAAAATAGATGATCCCAACCAAAGAATATATGTTTGTGAAGTGGGAT AGAAAGTACCTTGGTGGTGGTGCTGGAGAACGCTATATCTGTGAACTGAA CTTTGACTTGACTAGTATGGGGTATTGGTTGTGTCAATGTAGAGCACATT GACACAGGTCATAAGGCTATAAAGGTTAGAGGACAAAGATTCTTCTCATT TTAGAAAACTAAATTGGAAATCTGATATTTGAAGATCTGAATGGGGCTAT GGTCAGACTCACCATGGGAATTTTTGGTCCAGTTTTTTGTGTGATGATAT TTATCATTTTTAACTGTATGTGCCTCTGCCGACTGTATAAACCCATTTTT CCCCTTTCTAGAGTTGCACTTCCGACCTTCCATTTAGTTGCATATTCAAT TATGGGGAAGTTTTGATCTATGATGAATGAATTTATATTGAAATATGCTT AACAATTATTTCTTTTGTAACAGTTTAAGCTGCCATCTTATGTTATTCTC ATATTTGATTTCTCTGTTTCTTTTTCTTGAAAAACAAATGTCTTTTGATG CTTTAACTTTGAGACATTCTATTATGCTTTGCCAAGTATCTTCTTGATAC CTTGCACATGGGTGATGGCCATCACTTTGTTGCTTAGGTACATATGCTGC CATGAGATATTTTTAATCTGGTTAATACATTAGCTTTCAAAGTGATTTAC TTTTGTTTCTACTTTTCTTTAAAATATTGACCTGAATAAGTACGGTTTTC TTGACCTTGAATTTTCCAGCATGATGGCAACAGTGATGAATTCAATATTG CTCCAATCAACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTC AATTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCGATCA GACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATCAGTTTTGGT GCTGGCAATCCACTTTTCTCAACTGACATAGCTGCAGCTCTTCGTGCTTC AGAGCGTATGCTGTTGTCCTTTGTTTTTAAAATAATTTTCTAATTACCTT TTTTCCCACTTTATCTGTAGTTTATGCAAAGGGCAACACATGCATCTTTG TTTTTGGTTTTTGGCTTTTGGTTTTGCTAGCATCAGCATATATCTCCTTC AACCTTGCAGTTAATGCTGAAGCGGTCCTCAAGGGTACTAATGTAGATGG TGTGTATGACTGCAACTCACGAGATAACAATTTCACTTTTGAGCACATAT CCTTCAGAGAGCTGGGGTCAAGAGGAGTCACCTCTATGGATGCGTCAGCG CTGACATTCTGCAAGGGAAATGCCATTCCTGGTTAGTAAGTTCTTGCATT TGATCTTTTTATGAGCGTCTTTCAGGTTTCAGTGCCTTTGGTTTTTGCAT TGACAATGGGTTCCAAAATGGTCCCTGTTGCATGCTTAAACTCTGCTAGG CACTGTTTCTGCAAGAAAAACTGTTGGTCCTTTGGTGGTTCTCCTCCTAG AGTTAATATTTTTGCTTTTATGTTTAGGTTTATGAGTCTCCAATGAAGTT ATCGATAAAGTGGTCATTTTATTACATATTTTATTTGACAAATTTCTGTG GCCATTTTCTTATACAGTCGTGGTTTTTAATCTACTGGAGCCTGGGAACA TCTCTAAAGCTTTATGTGGAGAACAAGTTGGCACACTAATTGATGAAACT GGAGCAGTAAGCTAACAGTTAATTCAGCCTATTCAATTATTGTTAGTCAC ACTGGAGCCATCAAGTTGAGTGGGATATTTGCTATGACTAAGATTCTTTA AGAAGAAAATATCAAATCAAGACAGATTCTGTGGCCAAGATTGTGGAAAT TGTACTTCGGAACTGTAATCACAAATTCCCTTTCACTAATTTTAGGTGGT GGTTGTAATTTTAATAAGCTTATGTAAAAAGA
back to top

Coding sequence (CDS) from alignment at Chr07:34800958..34805489-

>Phvul.007G224400.1_Pv_G19833_v2.1 ID=Phvul.007G224400.1_Pv_G19833_v2.1; Name=Phvul.007G224400.1; organism=Phaseolus vulgaris; type=CDS; length=1449bp; location=Sequence derived from: Chr07:34800958..34805489- (Phaseolus vulgaris
ATGGCCTCTTGCGACGACGACGACGACTTCTCTCTCCTCCGTGACGATAA
CCACCACCTCCACCAACCTTACGCGCCGCACCACCACTTCTCCCCCTCCG
CCGTCGCCGTCGCTCCTGTCCCACCCAAATCCGTCGCCGACGACGCCGAG
GACTACGGAAACCCCTTCGACGACGATGGCGGCAGTGAGAAGCGCAAGGA
CCGCGAGGAGATCGGCGAGGGAGCTGCGTCGTACGGATTCAACAAGAGAT
CTAAGGCTCCGCCGTCGAGCACAGGCAGCGCCGAGTACCGGAAGGACAGG
GAGGAGTGGAGCGACACAGCGATCGTGTGCCTCCTCGAGGCGTACACGGA
GAAGTTCACACAGCTGAATCGGGGAAACCTGAGAGGAAGAGATTGGGAGG
AGGTTGCGTTGGTGGTGAGCGGACGGTGCGAGAACCAATCGAAGAGCGTG
GAACAGTGTAAGAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGA
GCGACATAGAATGAGCAGTGGCTGCATTTCCACCAGTCACTGGCCTTGGT
TCAAACAATTGGAGCAGATTGTCGGGAATTCTCTTCCGGCGAAATTTCCC
GATGAGGATAAAGCGGTTGTTTCTGCCGGAACTTCGCCCAGACAATCGAA
GAGATATGGAGTGGCAACACCCAGTACTGGTGGTCAAGCGAATAGCATGA
GGTCAAAAGCACTGACAAACCTTAGATGGCGGAGGGTAGTCTTCAAAATT
AGTGGAGCAGCTCTTACTGGATCTGATACCTGCAACATTGACCCTAAGGT
GGCTATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTTG
AGGTGGCTATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGATGCATGG
GTAACTGCGACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGAT
GGCAACAGTGATGAATTCAATATTGCTCCAATCAACTCTAGAGAAGATGG
GTGTTCAGACTCGTGTACAAACTTCAATTGCCATGCAGGAGTTTGCTGAA
CCATACAATAGGCAGCGGGCGATCAGACATCTTGAGAAAGGAAGAGTTGT
TATATTTGGTGGCATCAGTTTTGGTGCTGGCAATCCACTTTTCTCAACTG
ACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCGGTCCTC
AAGGGTACTAATGTAGATGGTGTGTATGACTGCAACTCACGAGATAACAA
TTTCACTTTTGAGCACATATCCTTCAGAGAGCTGGGGTCAAGAGGAGTCA
CCTCTATGGATGCGTCAGCGCTGACATTCTGCAAGGGAAATGCCATTCCT
GTCGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCTAAAGCTTTATG
TGGAGAACAAGTTGGCACACTAATTGATGAAACTGGAGCAGTAAGCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036393AceGlu_kinase-like_sf
IPR001048Asp/Glu/Uridylate_kinase
IPR015963Uridylate_kinase_bac
Vocabulary: Molecular Function
TermDefinition
GO:0033862UMP kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006221pyrimidine nucleotide biosynthetic process