Phvul.009G078100.1

Transcript Overview
NamePhvul.009G078100.1
Unique NamePhvul.009G078100.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr09supercontigChr09:13113419..13113793 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL045Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL551Pisum sativum Cameor genome v1aPisum sativum
pspvL696Pisum sativum Cameor genome v1aPisum sativum
pvvuR771Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR801Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crpvL107Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipvL0519Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0657Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL471Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL416Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL512Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL992Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpvL0396Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0811Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0954Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0306Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0393Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0448Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0899Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL641Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL644Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL858Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR754Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR778Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR800Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR795Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR846Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR872Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR789Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR840Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR863Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR744Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR763Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR685Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR693Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR918Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR936Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR984Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR988Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL389Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL493Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL346Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL635Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL637Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL821Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL401Cicer arietinum
carpvL479Cicer arietinum
ccapvL425Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL565Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR837Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR858Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR873Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR907Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR917Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR894Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR897Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR937Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR846Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR844Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR872Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR872Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR917Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR905Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR945Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR916Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR941Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR678Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR729Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR746Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR748Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR719Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR746Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat06G0059300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va04G066190.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_02G00509.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_15113.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigan.02G060800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.02G048700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cc_v2.0_07120.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_09516.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_01639Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun08g039200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cc_v2.0_11439.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014648608.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Ca_09156Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr09.1487Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat6g021320.1Pisum sativum Cameor genome v1aPisum sativum
Vigst.03G158200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_014644985.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun08g039200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan07g256100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va07G065620.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun09g224600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g224600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.3g213360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan04g235400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_004498817.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg35541.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigan.03G252400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058872701.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-KK1_009539Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_004501407.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
evm.model.Chr08.356Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_09835Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cr_10699.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cr_02878.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Tiffany.R1.3g175160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_004802Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr09.1000508Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.001G036900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr01.1000272Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.009G078100Phvul.009G078100_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.009G078100.1Phvul.009G078100.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.009G078100.1_Pv_G19833_v2.1Phvul.009G078100.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.009G078100.1.v2.1.CDS.1Phvul.009G078100.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


Homology
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRC10_ARATH (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.615e-40
Identity = 68/96 (70.83%), Postives = 79/96 (82.29%), Query Frame = 1
Query:   85 TETRIQRLISEHPVIIFTR-SSCCMCHVMKKLLATIGVHPAVIELDDNEIXXXXXXXXXXXXXFIGGTCIGGLESLVALHVSGHLIPKLVQVGALW 369
            +E++I RLISEHPVIIFTR SSCCMCHVMKKLL+T+GVHP VIE+DD EI  L +        FIGGTC+GG ESLVALH+SG LIP+LV+VGALW
Sbjct:   54 SESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLAVEAAPVL--FIGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRXC6_ARATH (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 7.226e-40
Identity = 71/107 (66.36%), Postives = 81/107 (75.70%), Query Frame = 1
Query:   85 TETRIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIELDDNEIXXXXXXXXXXX-----------XXFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWV 372
            TE +I+RLISEHPVIIF+RSSCCMCHVMK+LLATIGV P VIELDD+E+ +LP                  A FIG  C+GGLESLVALH+SG L+PKLVQVGALWV
Sbjct:   38 TEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQVGALWV 144          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRXC7_ORYSJ (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.757e-24
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 1
Query:   94 RIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIELDDNEIXXXXXXXXXXX--XXFIGGTCIGGLESLVALHVSGHLIPKLVQVGAL 366
            RI RL+ E PV+IF R  CCMCHVM++LLA +G H  VIELD+    A       A   A F+GG  +GGL+ L+ LH+SG L+P+L +VGAL
Sbjct:   44 RIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAASAAAAAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.547e-20
Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 1
Query:   94 RIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIELDDN--------EIXXXXXXXXXXXXXFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWV 372
            R+ RL ++  V+IF+ SSCCMCH + +L   +GV+P V+ELD++         +  L   +   PA FIGG  +G  + +++LH+SG+L+P L   GALWV
Sbjct:    3 RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRS13_ARATH (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.921e-20
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  106 LISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIEL---DDNEIXXXXXXXXXXXXXFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWV 372
            ++ E+ V++F R  CC+ HV K+LL T GV+P V+E+   D+N    +       P  +IGG   GGLE+L+A H++G L+P L Q GALW+
Sbjct:   59 VVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.478e-19
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1
Query:   97 IQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIELDD-------NEIXXXXXXXXXXXXXFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWV 372
            I +++ E PV+I+++SSCCM H +K LL   G +PAV ELD+        + +     +   P  FIGG  +GG   +++LH++G LIP L + GALWV
Sbjct:    4 ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRXS2_ORYSJ (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.133e-19
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1
Query:   94 RIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIELDDNEIXXXXXXXXXXX---XXFIGGTCIGGLESLVALHVSGHLIPKLVQVGAL 366
            R+ RL+ E PV++F R  C M HVM++LLA +G H  VIEL+                  A F+GG  +GGLE L+ LH+SG L+P+L +VGAL
Sbjct:   30 RVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGGAAEEEEAALGGGAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRXC9_ARATH (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 8.292e-19
Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = 1
Query:   94 RIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIELD-----------DNEIXXXXXXXXXXXXXFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWV 372
            R++ ++ E+ VI+  R  CCMCHV+++LL  +GV+PAV+E+D           +N  V      V  PA ++GG   GGL+ ++A H+SG L+P L +VGALW+
Sbjct:   34 RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.483e-18
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:   94 RIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIELDD----NEIXXXXXX---XXXXXXXFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWV 372
            ++Q++ISE  V+IF+++SCCM H +K L    GV+P + ELD+     EI         +   P  FIGG  +GG   +++LH++  L+P L +VGALW+
Sbjct:    3 KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102          
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Match: GRXS8_ARATH (Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana OX=3702 GN=GRXS8 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.750e-18
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query:   94 RIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPAVIELDD----NEIXXXXXX---XXXXXXXFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWV 372
            +IQ++ISE  V+IF+ +SCCM H +K L   +GV+P + ELD+     EI         +   P  FIGG  +GG   +++LH++  LIP L + GALW+
Sbjct:    3 KIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRFGALWL 102          
The following BLAST results are available for this feature:
BLAST of Phvul.009G078100.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
GRC10_ARATH2.615e-4070.83Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 G... [more]
GRXC6_ARATH7.226e-4066.36Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN... [more]
GRXC7_ORYSJ5.757e-2451.61Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX... [more]
GRXC1_ORYSJ2.547e-2040.59Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX... [more]
GRS13_ARATH5.921e-2042.39Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana... [more]
GRXS2_ARATH3.478e-1940.40Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana ... [more]
GRXS2_ORYSJ6.133e-1944.68Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. j... [more]
GRXC9_ARATH8.292e-1940.38Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN... [more]
GRXS4_ARATH2.483e-1839.00Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana ... [more]
GRXS8_ARATH3.750e-1840.00Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana ... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011905Glutaredoxin-like, plant IITIGRFAMTIGR02189TIGR02189coord: 33..124
e-value: 5.8E-34
score: 114.0
NoneNo IPR availableGENE3D3.40.30.10coord: 22..122
e-value: 4.2E-21
score: 76.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 42..79
e-value: 5.5E-7
score: 29.7
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 30..123
score: 17.361
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 29..123

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.009G078100.1_Pv_G19833_v2.1

>Phvul.009G078100.1_Pv_G19833_v2.1 ID=Phvul.009G078100.1_Pv_G19833_v2.1; Name=Phvul.009G078100.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=125bp
MQAIEEVSPTMSSNNSSSSSLSMDLDDSTETRIQRLISEHPVIIFTRSSC
CMCHVMKKLLATIGVHPAVIELDDNEIVALPLPNVVAPAAFIGGTCIGGL
ESLVALHVSGHLIPKLVQVGALWV*
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mRNA from alignment at Chr09:13113419..13113793-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.009G078100.1_Pv_G19833_v2.1 ID=Phvul.009G078100.1_Pv_G19833_v2.1; Name=Phvul.009G078100.1; organism=Phaseolus vulgaris; type=mRNA; length=375bp; location=Sequence derived from: Chr09:13113419..13113793- (Phaseolus vulgaris
ATGCAAGCCATAGAGGAAGTGAGTCCCACCATGAGCAGCAACAACTCCTC CTCCTCCTCACTTTCCATGGACCTAGACGATTCCACCGAGACTCGGATCC AACGCCTCATATCCGAGCATCCAGTCATCATCTTCACCCGATCCTCCTGC TGCATGTGTCATGTCATGAAGAAGCTCTTGGCCACCATCGGTGTTCATCC CGCCGTCATCGAATTAGATGACAACGAGATCGTCGCTCTTCCCCTCCCCA ACGTCGTCGCTCCGGCAGCCTTCATCGGCGGCACCTGCATCGGTGGCCTT GAATCTCTGGTTGCCCTCCATGTCAGTGGCCACCTCATCCCTAAACTCGT TCAAGTCGGTGCTCTCTGGGTATAA
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Coding sequence (CDS) from alignment at Chr09:13113419..13113793-

>Phvul.009G078100.1_Pv_G19833_v2.1 ID=Phvul.009G078100.1_Pv_G19833_v2.1; Name=Phvul.009G078100.1; organism=Phaseolus vulgaris; type=CDS; length=375bp; location=Sequence derived from: Chr09:13113419..13113793- (Phaseolus vulgaris
ATGCAAGCCATAGAGGAAGTGAGTCCCACCATGAGCAGCAACAACTCCTC
CTCCTCCTCACTTTCCATGGACCTAGACGATTCCACCGAGACTCGGATCC
AACGCCTCATATCCGAGCATCCAGTCATCATCTTCACCCGATCCTCCTGC
TGCATGTGTCATGTCATGAAGAAGCTCTTGGCCACCATCGGTGTTCATCC
CGCCGTCATCGAATTAGATGACAACGAGATCGTCGCTCTTCCCCTCCCCA
ACGTCGTCGCTCCGGCAGCCTTCATCGGCGGCACCTGCATCGGTGGCCTT
GAATCTCTGGTTGCCCTCCATGTCAGTGGCCACCTCATCCCTAAACTCGT
TCAAGTCGGTGCTCTCTGGGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011905GlrX-like_pln_2
IPR002109Glutaredoxin
IPR036249Thioredoxin-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0015035protein-disulfide reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis