rna-TanjilR_24618
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: BPM2_ARATH (BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 4.893e-55 Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 1 Query: 100 DTVRGSHQFKITGYSLSKGIGIGKYIASETFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMW 429 +T+ GSH+FKI+GYSL KG+GIGKY+AS+TF VGGY WAIYFYPDGKS EDN+ YVSLFIALASEG DVRALFELTL+DQSG ERHKVHSHF RTLESGPYTLKYRGSMW Sbjct: 29 ETINGSHEFKISGYSLVKGMGIGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSVYVSLFIALASEGADVRALFELTLVDQSGNERHKVHSHFGRTLESGPYTLKYRGSMW 138 HSP 2 Score: 176.792 bits (447), Expect = 7.246e-47 Identity = 82/137 (59.85%), Postives = 108/137 (78.83%), Query Frame = 3 Query: 1194 GCCRGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFKV*INDLWASFFIDVSNV 1604 G GYKRFFKR+ LE+SDYLKD+ L V C VGVVKS TEGP+ Y++ VP S +GQ FG+LLES KG+DV+FEV+GE F AHKLVLAARS VFRAQLFGP++ +NT CI +ED++AP+FK+ ++ ++ D+ ++ Sbjct: 135 GSMWGYKRFFKRSLLESSDYLKDNGLLVRCCVGVVKSRTEGPRCYNIPVPVSGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAPIFKMLLHFIYWDEMPDMQDL 271 HSP 3 Score: 162.155 bits (409), Expect = 7.868e-42 Identity = 72/98 (73.47%), Postives = 83/98 (84.69%), Query Frame = 3 Query: 2040 ILQALLHVIYWDSLPDMQELTGLNSKWATTLMAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRGVF 2333 I + LLH IYWD +PDMQ+L G + KWA+TL+AQHLLAAADRY LERLR +CE+ LCE ++INTVATTLALAEQHHCFQLKA CLKFIA PENL+ V Sbjct: 252 IFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRYALERLRTICESKLCEGISINTVATTLALAEQHHCFQLKAACLKFIALPENLKAVM 349 HSP 4 Score: 89.3521 bits (220), Expect = 1.967e-17 Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 2733 IFFPFVSSAVMQTDGFEYLKESCPAVLTELLEYVARVTEHSDFMCKHRNDAILDGSDINGRRVKQRL 2933 I P AVM+TDGF+YLKESCP++L+ELLEYVAR++EHS HR + DG D+NGRRVKQRL Sbjct: 339 IALPENLKAVMETDGFDYLKESCPSLLSELLEYVARLSEHSLTSSGHRKELFADGCDLNGRRVKQRL 405
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: BPM4_ARATH (BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 3.932e-52 Identity = 88/109 (80.73%), Postives = 100/109 (91.74%), Query Frame = 1 Query: 103 TVRGSHQFKITGYSLSKGIGIGKYIASETFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMW 429 T+ GSH F I GYSL+KGIGIGK+IAS+TF+VGGY WAIYFYPDGK+ EDN+ YVS+FIALAS+GTDVRALFEL+LLDQSGK +HKVHSHF+R LESGPYTLKYRGSMW Sbjct: 44 TINGSHSFTIKGYSLAKGIGIGKHIASDTFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASDGTDVRALFELSLLDQSGKGKHKVHSHFDRALESGPYTLKYRGSMW 152 HSP 2 Score: 140.969 bits (354), Expect = 3.582e-34 Identity = 67/133 (50.38%), Postives = 95/133 (71.43%), Query Frame = 3 Query: 1194 GCCRGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFKV*INDLWASFFID 1592 G GYKRFF+R LETSD+LKDDCL +NC+VGVV S + P+++S+ VP S++G HFG LLE+ GSD++F V+GE F AH+LVLAARSPVF ++ F + + + I+V D+E VFK ++ ++ I+ Sbjct: 149 GSMWGYKRFFRRLMLETSDFLKDDCLKINCTVGVVVSEIDCPRLHSIHVPASDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESE-FLDVTGEEDRDIEVTDMEPKVFKALLHYIYKDALIE 280 HSP 3 Score: 74.7146 bits (182), Expect = 1.431e-12 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 2040 ILQALLHVIYWDSLPDMQELTGLNSKWATT----LMAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRGVF 2333 + +ALLH IY D+L + E + + +A LL AAD+Y L RL LMCE+ LC+ +++++VA LALA++++ LK+VCLKF A ENL V Sbjct: 265 VFKALLHYIYKDALIEDAESSSSSGSSVGPSASDTLAAKLLGAADKYKLPRLSLMCESVLCKDISVDSVANILALADRYNASALKSVCLKFAA--ENLIAVM 364
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: BPM1_ARATH (BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.085e-51 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 1 Query: 106 VRGSHQFKITGYSLSKGIGIGKYIASETFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMW 429 V G H+FKI GYSL+KG+G+GKY+AS+TF VGGY WAIYFYPDGKS EDN++YVSLFIALASEG DVRALFELTL+DQSG +HKVHSHF R L+SGPYTLKYRGSMW Sbjct: 32 VNGFHEFKICGYSLAKGVGVGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIALASEGADVRALFELTLVDQSGNGKHKVHSHFGRALDSGPYTLKYRGSMW 139 HSP 2 Score: 177.948 bits (450), Expect = 3.414e-47 Identity = 83/137 (60.58%), Postives = 106/137 (77.37%), Query Frame = 3 Query: 1194 GCCRGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFKV*INDLWASFFIDVSNV 1604 G GYKRFF+R++LE+SDYLK++ L V C VGVVKS TEGP+ Y++ VP SN+GQ G LLES KG DV F+V+GE FNAHKLVLA RSPVF AQLFGP+ D+NTKCI +ED+EAP+FKV ++ ++ D+ + Sbjct: 136 GSMWGYKRFFRRSSLESSDYLKENSLLVRCRVGVVKSVTEGPRYYNIPVPVSNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQLFGPLGDRNTKCITIEDMEAPIFKVLLHFIYWDELPDMQEL 272 HSP 3 Score: 157.918 bits (398), Expect = 2.482e-40 Identity = 73/98 (74.49%), Postives = 82/98 (83.67%), Query Frame = 3 Query: 2040 ILQALLHVIYWDSLPDMQELTGLNSKWATTLMAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRGVF 2333 I + LLH IYWD LPDMQEL G +S A+TL+AQHLLAAADRY LERL+ +CE+ LCE VAINTVATTLALAEQHHC QLKAVCLKF+A PENL+ V Sbjct: 253 IFKVLLHFIYWDELPDMQELIGTDSTLASTLVAQHLLAAADRYALERLKAICESKLCEGVAINTVATTLALAEQHHCLQLKAVCLKFVALPENLKAVM 350 HSP 4 Score: 85.8853 bits (211), Expect = 2.830e-16 Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 2757 AVMQTDGFEYLKESCPAVLTELLEYVARVTEHSDFMCKHRNDAILDGSDINGRRVKQRL 2933 AVMQTDGF+YLKESCP++LTELL+YVAR++EHS + HR + DG D +GRRVK RL Sbjct: 348 AVMQTDGFDYLKESCPSLLTELLQYVARLSEHSVIVSGHRKEIFADGCDASGRRVKPRL 406
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: BPM5_ARATH (BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BPM5 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 7.113e-51 Identity = 85/109 (77.98%), Postives = 99/109 (90.83%), Query Frame = 1 Query: 103 TVRGSHQFKITGYSLSKGIGIGKYIASETFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMW 429 TV GSHQF I GYSL+KG+GIGK+IAS+ FSVGGY W I+FYPDGK+ EDN++YVS+FIALASEGT+VRALFEL L+DQSGK +HKVHSHFER+L+ GPYTLKYRGSMW Sbjct: 26 TVNGSHQFVIQGYSLAKGMGIGKHIASDNFSVGGYQWGIFFYPDGKNPEDNSSYVSVFIALASEGTEVRALFELALVDQSGKGKHKVHSHFERSLDGGPYTLKYRGSMW 134 HSP 2 Score: 131.724 bits (330), Expect = 2.123e-31 Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 3 Query: 1194 GCCRGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFK 1553 G GYKRFF+R+ LETSDYLKDDCL +NC+VGVV S P+++SV VP S +G HFG LL+S +GSD++F + GE F AHKLVLAARSP F+++ F + NT+ + + D+E VFK Sbjct: 131 GSMWGYKRFFRRSILETSDYLKDDCLIINCTVGVVVSEILCPQLHSVHVPDSELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTE-VTINDLEPKVFK 249 HSP 3 Score: 75.0998 bits (183), Expect = 1.023e-12 Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 3 Query: 2040 ILQALLHVIYWDSLP-DMQELTGLN------SKWATTLMAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRGVF 2333 + +ALL +Y DSLP D++ T S+ TL+ + +LAAAD+Y L RLRL+CE+ +C+ V++ +VA LALA++++ +LK VCLKF A ENL V Sbjct: 247 VFKALLQFMYKDSLPEDVEPATAHTFERLKLSEIYETLIVK-VLAAADKYDLIRLRLLCESHICKGVSVKSVAKILALADRYNAKELKGVCLKFTA--ENLAAVL 348
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: BPM3_ARATH (BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 2.540e-49 Identity = 81/110 (73.64%), Postives = 96/110 (87.27%), Query Frame = 1 Query: 100 DTVRGSHQFKITGYSLSKGIGIGKYIASETFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMW 429 +TV GSHQF I GYSL+KG+ GK+I S+ FSVGGYDWAIYFYPDGK+ ED ++Y+SLFIALAS+ D+RALFELTL+DQSGK +HKVHSHF+R LE GPYTLKY+GSMW Sbjct: 21 ETVNGSHQFTIQGYSLAKGMSPGKFIQSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIALASDSNDIRALFELTLMDQSGKGKHKVHSHFDRALEGGPYTLKYKGSMW 130 HSP 2 Score: 160.229 bits (404), Expect = 3.779e-41 Identity = 73/139 (52.52%), Postives = 97/139 (69.78%), Query Frame = 3 Query: 1194 GCCRGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFKV*INDLWASFFIDVSNVAA 1610 G GYKRFFKR+ALETSDYLKDDCL +NC+VGVV++ EGPK Y + +P SNMGQ LL+S G D++F+V E + AHKL+LAARSPVFRAQ FGP+ + N I ++DIE +FK ++ ++ +V + Sbjct: 127 GSMWGYKRFFKRSALETSDYLKDDCLVINCTVGVVRARLEGPKQYGIVLPLSNMGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFKAMLSFIYTDVLPNVHEITG 265 HSP 3 Score: 111.694 bits (278), Expect = 9.282e-25 Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 2040 ILQALLHVIYWDSLPDMQELTGLNSKWATTLMAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRGVF 2333 I +A+L IY D LP++ E+TG S + T M QHLLAAAD Y L RL+++CE LCE + ++ VATTLALAEQH QLKA CL+F+A P NL V Sbjct: 244 IFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEVLLCEKLDVDNVATTLALAEQHQFLQLKAFCLEFVASPANLGAVM 341
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: BPM6_ARATH (BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=BPM6 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.170e-47 Identity = 80/109 (73.39%), Postives = 95/109 (87.16%), Query Frame = 1 Query: 103 TVRGSHQFKITGYSLSKGIGIGKYIASETFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMW 429 T GSHQF I GYSL+KGIG+GK+IAS+ FSVGGY W I+ YPDGK+ EDN++YVS+FI LASE T+VRALFEL+L+DQSGK +HKVHSHF R+L+ GPYTLKYRGSMW Sbjct: 33 TTNGSHQFVIQGYSLAKGIGVGKHIASDNFSVGGYQWTIFVYPDGKNPEDNSSYVSVFIVLASECTEVRALFELSLVDQSGKGKHKVHSHFNRSLDGGPYTLKYRGSMW 141 HSP 2 Score: 142.51 bits (358), Expect = 4.499e-35 Identity = 65/120 (54.17%), Postives = 87/120 (72.50%), Query Frame = 3 Query: 1194 GCCRGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFK 1553 G GYKRFF+R+ LETSDYLKDDCL +NC+VGVV S P++ S+ VP S +G HFG+LL++ +GSDV+F+V GE F AHKLVLAARS FR+ + + + N+ + + D+E VFK Sbjct: 138 GSMWGYKRFFRRSLLETSDYLKDDCLKINCTVGVVVSEMHCPRLLSIHVPDSELGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVV-ISDLEPKVFK 256 HSP 3 Score: 76.2554 bits (186), Expect = 4.488e-13 Identity = 45/105 (42.86%), Postives = 71/105 (67.62%), Query Frame = 3 Query: 2040 ILQALLHVIYWDSLP-DMQELTGLN------SKWATTLMAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRGVF 2333 + +ALLH +Y DSLP D++ LT + S+ TL+ + LLAAA+ Y L RLRL+CE+ +C+ ++I++V+ LAL+++++ +LK+V LKF A ENL V Sbjct: 254 VFKALLHFMYKDSLPGDVEPLTAHSFDLLRPSEIDDTLIVK-LLAAAEMYNLSRLRLLCESHICKGISISSVSKILALSDKYNASELKSVSLKFTA--ENLAAVL 355
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: SPOPL_HUMAN (Speckle-type POZ protein-like OS=Homo sapiens OX=9606 GN=SPOPL PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.530e-12 Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 1206 GYKRFFKRTAL--ETSDYLKDDCLSVNCSVGVVKS------HTEGPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFK 1553 G+K+F +R L E + L DD L++ C V VV+ HT ++ VP + + G L E+ + +D SF V G+ F AHK VLAARSPVF A M++ +++ D++ VFK Sbjct: 132 GFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGHT---NTNTLKVPECRLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNRVEINDLDPEVFK 252 HSP 2 Score: 69.707 bits (169), Expect = 4.900e-11 Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 3 Query: 2133 MAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRGV 2330 MA +LLAAAD+Y LERL++MCE LC +++ VA TL LA+ H QLKA + FI R LR + Sbjct: 269 MADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQL 334
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: SPOPL_XENLA (Speckle-type POZ protein-like OS=Xenopus laevis OX=8355 GN=spopl PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.207e-12 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 1206 GYKRFFKRTAL--ETSDYLKDDCLSVNCSVGVVKSH---TEGPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFK 1553 G+K++ +R L E + L DD L++ C V VV+ + ++ VP + + G L E+R+ +D S V G+ F AHK +LAARSPVF A PM++ + + D++ VFK Sbjct: 132 GFKKYIRRDFLLDEANGLLPDDKLTLYCEVSVVQDSINISGQSSSNNLKVPECRLAEDMGYLWENRRFTDCSLFVEGKEFKAHKSILAARSPVFSAMFEHPMQESRKNRVYIRDVDPEVFK 252 HSP 2 Score: 64.6994 bits (156), Expect = 1.853e-9 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 3 Query: 2133 MAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIAR 2309 MA LLAAAD+Y LERL++MCE +LC + + VA L LA+ H QLKA + FI R Sbjct: 269 MADKLLAAADKYALERLKVMCEESLCNNLTVENVADVLILADLHSAEQLKAQAIDFINR 327
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: SPOP_DANRE (Speckle-type POZ protein OS=Danio rerio OX=7955 GN=spop PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.223e-12 Identity = 45/121 (37.19%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 1206 GYKRFFKRTAL--ETSDYLKDDCLSVNCSVGVVKS--HTEGPKIYS-VAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFK 1553 G+K+F +R L E + L DD L++ C V VV+ + G + V VP + G L E + +D S V G+ F AHK +LAARSPVF A M++ +++ D+EA VFK Sbjct: 132 GFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEAEVFK 252 HSP 2 Score: 60.077 bits (144), Expect = 5.388e-8 Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 3 Query: 2133 MAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFI 2303 MA LLAAAD+Y LERL++MCE LC +++ A L LA+ H QLK + FI Sbjct: 269 MADDLLAAADKYALERLKVMCEDALCTSLSVENAAEILILADLHSADQLKTQAVDFI 325
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Match: SPOLA_DANRE (Speckle-type POZ protein-like A OS=Danio rerio OX=7955 GN=spopla PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.569e-11 Identity = 42/121 (34.71%), Postives = 61/121 (50.41%), Query Frame = 3 Query: 1206 GYKRFFKRTAL--ETSDYLKDDCLSVNCSVGVVKSHTE---GPKIYSVAVPPSNMGQHFGQLLESRKGSDVSFEVNGEIFNAHKLVLAARSPVFRAQLFGPMKDQNTKCIKVEDIEAPVFK 1553 G+K+F +R L E + L DD L++ C V VV+ + + VP + G L E + +D S V G+ F AHK +LAARSPVF A M++ + + D+E VFK Sbjct: 132 GFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLKVPECQLSDDLGNLWECSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNRVDISDVEPEVFK 252 HSP 2 Score: 68.9366 bits (167), Expect = 7.708e-11 Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 2133 MAQHLLAAADRYGLERLRLMCETTLCEVVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLR 2324 MA LLAAAD+Y LERL++MCE LC +++ VA TL LA+ H QLKA + FI R LR Sbjct: 269 MADSLLAAADKYALERLKVMCEEALCNSLSVENVADTLILADLHSAEQLKAQAIDFINRCSVLR 332 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_24618 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_24618_La_Tanjil_v1.0 ID=rna-TanjilR_24618_La_Tanjil_v1.0; Name=rna-TanjilR_24618; organism=Lupinus angustifolius; type=mRNA; length=2936bpback to top protein sequence of rna-TanjilR_24618_La_Tanjil_v1.0 >rna-TanjilR_24618_La_Tanjil_v1.0 ID=rna-TanjilR_24618_La_Tanjil_v1.0; Name=rna-TanjilR_24618_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=410bpback to top mRNA from alignment at Chr_LG04-CM007364.1:25698713..25701648+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_24618_La_Tanjil_v1.0 ID=rna-TanjilR_24618_La_Tanjil_v1.0; Name=rna-TanjilR_24618; organism=Lupinus angustifolius; type=mRNA; length=2936bp; location=Sequence derived from: Chr_LG04-CM007364.1:25698713..25701648+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG04-CM007364.1:25698713..25701648+ >rna-TanjilR_24618_La_Tanjil_v1.0 ID=rna-TanjilR_24618_La_Tanjil_v1.0; Name=rna-TanjilR_24618; organism=Lupinus angustifolius; type=CDS; length=1233bp; location=Sequence derived from: Chr_LG04-CM007364.1:25698713..25701648+ (Lupinus angustifoliusback to top |