rna-TanjilR_04278
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=SCL14 PE=2 SV=2) HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0 Identity = 321/684 (46.93%), Postives = 436/684 (63.74%), Query Frame = 1 Query: 25 VLNYINQMLNDEEDMDKSYMFHDSLALQATEKSFYELIGNKYPSTFTHYLHNYP---TIENPYHDYSISSDSTYCIXXXXXXXXXXXXXXXI--LPMHYHS-VPSNFVLHSKSTSITQSSMKHMXXXXXXXXXXXXXXVPAIFYSMSLG---EKGY-------------------LMQIERGMKKDTKQVMINAEG-DEGEHKNRDS--------DGRKNRKREDKRELEEGRSNKHSAVYVDENELSEIFDKVLFGTGLGK------------RSNMITLQQNEKSYMHGCGKNRAKKQVKNEKVVDLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGTGTQIYSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLS-QRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFE-ELFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCWVP 1923 VL YI+Q+L +E+ +K MFHD+LALQA EKS YE +G KYPS+ + ++P ++P S + S Y T+TT S++SH + P H+ +PSNFV S S S + + + + S F + V +F L +KG + + G K++ +V + E DE EH + S G+K+ R++ + E RSNK SAVYV+E+ELSE+FDK+L G GK + ++T Q N + + ++ DLRTLL+LCAQA+S ++ TA E+L+QI++HSS +G+G++R+AH F N+LEARLAGTGTQIY+ LSSK SAA+M++AY+ Y S CPF K IIFA +S+ A T+HI+DFGI+YGF+WPALI RLS RP G PKLRITGIELPQ GFRP E V E G RLA YC+R NVPFEYNAI Q KWE+I++EDLK+ + E V VN +FRF NLLDETVLVN+PRDAVL LIR++NP++F+ I++G Y+APFF TR REAL HYSA+FD+ D+ + ED MRL +E E +G E++NV+ CEG ERV RPETYKQWQ R + GF+QL L+++++ LK ++ N Y +F ++ + W+LQGWKGRI+ ASS WVP Sbjct: 86 VLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKYPSSSSASSVDHPERLASDSPDGSCSGGAFSDYASTTTTTSSDSHWSVDGLENRPSWLHTPMPSNFVFQSTSRSNSVTGGGGGGNSAVYGSGFGDDLVSNMFKDDELAMQFKKGVEEASKFLPKSSQLFIDVDSYIPMNSGSKENGSEVFVKTEKKDETEHHHHHSYAPPPNRLTGKKSHWRDEDEDFVEERSNKQSAVYVEESELSEMFDKILV-CGPGKPVCILNQNFPTESAKVVTAQSNGAKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQ-KWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENG-YDKNFDVDQNGNWLLQGWKGRIVYASSLWVP 766
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1) HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0 Identity = 313/669 (46.79%), Postives = 422/669 (63.08%), Query Frame = 1 Query: 10 DFSATVLNYINQMLNDEEDMDKSYMFHDSLALQATEKSFYELIGNKY-------PSTFTHYLHNYPTIENPYHDYSISSDSTYCIXXXXXXXXXXXXXXXILPMHY--HSVPSNFVLHSKSTSITQSSMKHMXXXXXXXXXXXXXXVPAIFYSMSLGEKGYLMQIERGMKKDTK------QVMINAEGDEGEHKNRDSDGRKNRKREDKRELEEGRSNKHSAVYVDE-NELSEIFDKVLFGTGLGKRSNMITLQQNEKSYMHGCGKNRAKKQVKNEK-----------VVDLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGTGTQIYSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEA--ETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFE-ELFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCWVPL 1926 DFS +VL YI+Q+L +E+ DK MFHD+L+LQA EKS YE +G KY P T T L + +P SS +T S + + ++ P + +PSNF+ S ST + + + S FS V +F L +Q ++GM++ +K Q++I+ NR + G+K+ RE++ L E RS K SA+YVDE +EL+++FD +L G K + L NE + K K EK DLRT+L+ CAQA+S N+ TA ELL +I+QHSSS GDGT+R+AH F N+LEARLAG GTQ+Y+ LSSK S ++M++AY+ Y S CPF K+ IIFA +SI +A A +T+HI+DFGI+ GF+WP+LI RL+ R KLRITGIELPQ GFRP E V E GRRLA YC++FN+PFEYNAI QK WESIK+EDLK+ + E VAVN +FRF NLLDETV V++PRD VL LIR++ P +F+ GI++G Y+APFF TR RE L HYS++FD+ DTN+ EDPMR+ FE E +G E+MNV+ CEG ERV RPE+YKQWQ R + GF+Q+ L++++V KLK + + +F ++ D W+LQGWKGRI+ SS WVPL Sbjct: 55 DFSDSVLKYISQVLMEEDMEDKPCMFHDALSLQAAEKSLYEALGEKYPVDDSDQPLTTTTSLAQL--VSSPGGSSYASSTTTTSSDSQWSFDCLENNR----PSSWLQTPIPSNFIFQSTSTRASSGN-------AVFGSSFSGDLVSNMFNDTDLA-----LQFKKGMEEASKFLPKSSQLVID-----NSVPNRLT-GKKSHWREEEH-LTEERSKKQSAIYVDETDELTDMFDNILI-FGEAKEQPVCIL--NESFPKEPAKASTFSKSPKGEKPEASGNSYTKETPDLRTMLVSCAQAVSINDRRTADELLSRIRQHSSSYGDGTERLAHYFANSLEARLAGIGTQVYTALSSKKTSTSDMLKAYQTYISVCPFKKIAIIFANHSIMRLASSANAKTIHIIDFGISDGFQWPSLIHRLAWRRGSSCKLRITGIELPQRGFRPAEGVIETGRRLAKYCQKFNIPFEYNAIAQK-WESIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHSPRDTVLKLIRKIKPDVFIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLKLMVESGYKPKEFDVDQDCHWLLQGWKGRIVYGSSIWVPL 694
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=SCL34 PE=3 SV=1) HSP 1 Score: 464.151 bits (1193), Expect = 4.755e-155 Identity = 234/456 (51.32%), Postives = 310/456 (67.98%), Query Frame = 1 Query: 577 KREDKRELEEGRSNKHSAVYVDENELSEIFDKVLFGTGLGKRSNMITLQQNEKSYMHGCGKNRAKKQVKNEKVVDLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAG-TGTQI---YSTL-SSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNN-PRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFE-ELFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCWVP 1923 K+ +R+ EE RS+K A V++++++++FDKVL G ++ + G+ KK+ K +VVD RTLL CAQAIS+ + +TA E L QI+Q SS +GD QR+AHCF NALEARL G TG I Y+ L SS +AA+ +RAY +Y S+ PF L F++ I VAK+A LHIVDFGI YGF+WP I+ +S R P KLRITGIELPQ GFRP ER+ E GRRLA YCKRFNVPFEY AI + WE+I+IEDL I NEV+AVN R +NL DET N PRDAVL LIR +NP +F+H I+NG ++APFF +R +EA+ HYSA+FD+ D+ + ++ R++FE E +G E MNVI CE +RV RPETY+QWQ+R + GFKQ ++ ++V + +L+ YH DF+++ + KW+LQGWKGR L ASSCWVP Sbjct: 174 KKNHERDFEEVRSSKQFASNVEDSKVTDMFDKVLLLDGECDPQTLLDSEIQAIRSSKNIGEKGKKKKKKKSQVVDFRTLLTHCAQAISTGDKTTALEFLLQIRQQSSPLGDAGQRLAHCFANALEARLQGSTGPMIQTYYNALTSSLKDTAADTIRAYRVYLSSSPFVTLMYFFSIWMILDVAKDAPVLHIVDFGILYGFQWPMFIQSISDRKDVPRKLRITGIELPQCGFRPAERIEETGRRLAEYCKRFNVPFEYKAIASQNWETIRIEDLDIRPNEVLAVNAGLRLKNLQDETGSEENCPRDAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHKDFVVDENSKWLLQGWKGRTLYASSCWVP 629
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=SCL31 PE=2 SV=3) HSP 1 Score: 444.121 bits (1141), Expect = 2.114e-146 Identity = 223/444 (50.23%), Postives = 297/444 (66.89%), Query Frame = 1 Query: 610 RSNKHSAVYVDENELSEIFDKVLFGTGLGKRSNMITLQQNEKSYMHGCGKNRAKKQVKNEKVVDLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAG-TGTQI---YSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNN-PRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFE-ELFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCWVP 1923 R +K AV ++ +L+E+FDKVL G + I S K RAKK+ + VD RTLL LCAQ++S+ + TA +LL+QI++ S +GD +QR+AH F NALEARL G TGT I Y ++SSK +AA+++++Y ++ SA PF L F+ I AK+A LHIVDFGI YGF+WP I+ LS+ G KLRITGIE+PQ G RP ER+ + GRRL YCKRF VPFEYNAI K WE+IK+E+ KI NEV+AVN + RF+NL D + PRD L LIR +NP++F+ +NG ++APFF TR +EAL HYSA+FD+ + E+P R+ FE E +G EVMNVI CEG +RV RPETYKQWQ+R + GFKQ ++ ++V +++++ YH DF+L+ D W LQGWKGRIL +SSCWVP Sbjct: 256 RRSKQFAVNEEDGKLTEMFDKVLLLDG--ECDPQIIEDGENGSSKALVKKGRAKKK---SRAVDFRTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVP 694
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=SCL9 PE=2 SV=1) HSP 1 Score: 432.18 bits (1110), Expect = 1.431e-141 Identity = 222/479 (46.35%), Postives = 307/479 (64.09%), Query Frame = 1 Query: 556 SDGRKNRKREDKRELEEGRSNKHSAVYVDENELSEIFDKVLFGTGLGKRSNMITLQQNEKSYMHGCGKNRAK----------------------KQVKNEKVVDLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGTGTQIYSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFE-ELFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCWVP 1923 S RKN R D+ +EE RS+K AV+ ++ S++ DK+L G+ +M G K +A Q ++VVDLR+LL+ CAQA+++++ A +LLKQI+ HS+ GDG QR+AHCF N LEARLAGTG+QIY + SK SAA +++A++++ + CPF KL +I + ++ +H++DFGI YGF+WP LI R S +G PK+RITGIE PQPGFRP +RV E G+RLA+Y K F VPFEY AI KKW++I++EDL I ++E+ VNC++R ENL DE+V V + RD VL+LI ++NP +FV GI+NG Y+APFF TR REAL H+S++FD+L+T V ED R+ E E+FG E +NVI CEG ERV RPETYKQW +R + G Q+ D I+ ++ YH DF+++ D +W+LQGWKGR + A S W P Sbjct: 243 SKARKNSSR-DEICVEEERSSKLPAVFGEDILRSDVVDKILVHVPGGE--SMKEFNALRDVLKKGVEKKKASDAQGGKRRARGRGRGRGRGGGGGQNGKKEVVDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSM--YGSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIA-KKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHT-FYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714 HSP 2 Score: 59.3066 bits (142), Expect = 9.507e-8 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 10 DFSATVLNYINQMLNDEEDMDKSYMFHDSLALQATEKSFYELIGNKYPST 159 DFS VL YI+QMLN+E+ DK M +SL L+A E+S YE IG KYP + Sbjct: 76 DFSDAVLGYISQMLNEEDMDDKVCMLQESLDLEAAERSLYEAIGKKYPPS 125
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL11_ARATH (Scarecrow-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=SCL11 PE=2 SV=1) HSP 1 Score: 407.912 bits (1047), Expect = 1.758e-133 Identity = 210/463 (45.36%), Postives = 287/463 (61.99%), Query Frame = 1 Query: 565 RKNRKREDKRE-LEEGRSNKHSAVYVDE-NELSEIFDKVLFGTGLGKRS----NMITLQQNEKSYMHGCGKNRAKKQVKNEKVVDLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGT-GTQIYSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMR---LKFEELFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCWVP 1923 RK R R D+ + LE R NK A++V E EL+ + VL + +IT Q G + K K VDLR+LL CAQA++S + A + LK+I+ HSSS GDGTQR+A F ALEAR+ G + + S S ++++AY+++ CP + A SI+ +A +A LHIVDFG+ YGF+WP L+R LS+RP GPP LR+TGIELPQ GFRP +RV E GRRL +C +FNVPFE+N I KKWE+I +++L I E VNC+ R + DETV +++PRD VL L R +NP +FV ING Y++PFF TR REAL HYS++FD+ DT + ED + L EL + M+VI CEG ER RPETYKQW++R + GFK ++ ++I+ + K+ +R YH DF+++ D W+LQGWKGR++ A SCW P Sbjct: 140 RKYRHRNDEEDDLENNRRNKQPAIFVSEMEELAVKLEHVLLVCKTNQEEEEERTVITKQSTPNRAGRAKGSSNKSKTHKT-NTVDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIA-KKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRK-RYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKP 599
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1) HSP 1 Score: 400.593 bits (1028), Expect = 6.266e-131 Identity = 207/443 (46.73%), Postives = 282/443 (63.66%), Query Frame = 1 Query: 598 LEEGRSNKHSAVYVDENELSEIFDKVLFGTGLGKRSNMITLQQNEKSYMHGCGKNRAKKQVKNEKVVDLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGTGTQIYSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFE-ELFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCWVP 1923 LE GR +K A+ +EL+E F++VL + + EK H G + KQ K+++ VD+R LLM CAQA++S + A E LK+I++HSS GD TQR+ + F ALEAR+ GT T S SS+ S ++++AY+ + ACP + A +I +A +A TLHI+DFGI YGF+WP LI+ LS+R GPP LR+TGIELPQ GFRP ERV E GRRL +C +FNVPFEY + + K WE+I ++DL I E VNC+ R + DETV +N+PRD L L R +NP +FV ING Y++PFF TR REAL H S++FD+ +T + +D R E EL + M+VI CEG ER RPETYKQWQ+R + GF+ L ++IV K+ ++ + YH DF+++ D W+ QGWKGR+L A SCW P Sbjct: 147 LESGRKSKLPAIST-VDELAEKFEEVLLVCQKNDQG-----EATEKKTRHVKGSSNRYKQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTPISATSSR-TSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEY-SFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVK-ERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKP 580
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.667e-52 Identity = 117/375 (31.20%), Postives = 190/375 (50.67%), Query Frame = 1 Query: 799 DLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGTGTQIYSTLS-SKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFEE-LFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCW 1917 DLR L+ CA+A+S N+ A ++++++Q S G+ QR+ L A+LA +G+ IY L+ ++ E++ + CP+ K + A +I KE +HI+DF I G +W LI+ + RP GPP++RITGI+ + + G RLA K+FNVPFE+N++ +K ++L + E +AVN F ++ DE+V N RD +L +++ L+P + + F R E + +Y+AMF+ +D + + R+ E+ +V+N+I CEG +RV R E +W+ R GF L + + +K LRN Y + LE + GW R L AS W Sbjct: 118 DLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSV-SEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRN--YSDKYRLEERDGALYLGWMHRDLVASCAW 489
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 3.336e-52 Identity = 119/374 (31.82%), Postives = 183/374 (48.93%), Query Frame = 1 Query: 799 DLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGTGTQIYSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFEE-LFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCW 1917 DL+ +L CA+A+ + + L+ Q+QQ S G+ QR+ L ARLA +G+ IY L K + E++ + ACP+ K A +I K +HI+DF I+ G +W +LIR L RP GPP +RITGI+ P+ F + + G+RL + VPFE++ E ++IE L + E +AVN ++ DE+V V N RD +L L++ L+P++ + F R E + HY A+F+ +D + + R+ E+ EV+N+I CEG ER R E +W+ R GFK L + +K L + Y + LE + GWK + L S W Sbjct: 226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTE-VEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLL--ESYSEKYTLEERDGALYLGWKNQPLITSCAW 596
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 9.524e-52 Identity = 116/376 (30.85%), Postives = 193/376 (51.33%), Query Frame = 1 Query: 799 DLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGTGTQIYSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGC--YDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFEE-LFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCW 1917 DL+ +L+ CA+A+S NN A+ + +++ S G+ QR+ L ARLA +G+ IY +L S+ + E + + CP+ K + A +I K+ E +HI+DF I G +W ALI+ + RP G P +RITG+ + +RL K+F+VPF +NA+ + E +++E+L + E + VN + +L DE+V + N RD +L +++ L+P + V + C +PF R E L +Y+AMF+ +D + R+ E+ +V+N+I CEG ER+ R E +W+ R GF+ L I ++ LR+ Y + + +E + GW RIL +S W Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVG-------DGSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCE-VEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKV-VTLVEQECNTNTSPFL-PRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRD--YSNGYAIEERDGALYLGWMDRILVSSCAW 412 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_04278 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_04278_La_Tanjil_v1.0 ID=rna-TanjilR_04278_La_Tanjil_v1.0; Name=rna-TanjilR_04278; organism=Lupinus angustifolius; type=mRNA; length=1929bpback to top protein sequence of rna-TanjilR_04278_La_Tanjil_v1.0 >rna-TanjilR_04278_La_Tanjil_v1.0 ID=rna-TanjilR_04278_La_Tanjil_v1.0; Name=rna-TanjilR_04278_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=642bpback to top mRNA from alignment at Chr_LG03-CM007363.1:351083..353011- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_04278_La_Tanjil_v1.0 ID=rna-TanjilR_04278_La_Tanjil_v1.0; Name=rna-TanjilR_04278; organism=Lupinus angustifolius; type=mRNA; length=1929bp; location=Sequence derived from: Chr_LG03-CM007363.1:351083..353011- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:351083..353011- >rna-TanjilR_04278_La_Tanjil_v1.0 ID=rna-TanjilR_04278_La_Tanjil_v1.0; Name=rna-TanjilR_04278; organism=Lupinus angustifolius; type=CDS; length=1929bp; location=Sequence derived from: Chr_LG03-CM007363.1:351083..353011- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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