rna-TanjilR_04302

Transcript Overview
Namerna-TanjilR_04302
Unique Namerna-TanjilR_04302_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1783
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG03-CM007363.1supercontigChr_LG03-CM007363.1:529627..531409 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL089Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL231Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR531Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR536Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR543Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0849Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0854Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0917Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0722Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0726Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0745Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0972Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0978Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR0774Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR0923Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0940Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0622Pisum sativum Cameor genome v1aPisum sativum
anpsR0635Pisum sativum Cameor genome v1aPisum sativum
anpsR0659Pisum sativum Cameor genome v1aPisum sativum
anpvR0840Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0871Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0715Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0739Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0815Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0866Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0706Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0748Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0716Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0721Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0721Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0726Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0762Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0784Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0794Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0688Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0697Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0686Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0706Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0800Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0806Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0811Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0663Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0667Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0712Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0770Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0823Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0700Cicer arietinum
ancarR0758Cicer arietinum
anccaR0696Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0728Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0862Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0867Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0751Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0758Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0815Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0817Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR0859Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0875Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0865Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0882Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0870Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0887Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR0705Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0881Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0911Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Psat07G0610900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat5g277680.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.07G059700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun05g249900.5Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-KK1_010100Cajanus cajan Asha genome v1.0Cajanus cajan
Vigst.07G044800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_07G00479.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.6g030080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr11.465Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Tiffany.R1.3g041840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
XM_058879026.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.06G187700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigan.04G327500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat05G0768000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.005G136300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_022119Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014640943.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014663191.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr05.2354.1.62113179Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.6g023640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cc_v2.0_23636.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_004505912.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun11g145800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr05.1000999Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg43669.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg9324.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr11.1378.1.6211316fVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.1g028880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun05g249900.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_14587Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_09391.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.011G074100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va08G063050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_17124Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.1g042120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigst.04G210600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058924109.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_06G01252.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat7g224080.1Pisum sativum Cameor genome v1aPisum sativum
Va05G050150.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.06G163300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan05g180900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
LR48_mrnaVigan08g153900Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_23583Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_30210Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_17148Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_04302gene-TanjilG_04302_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04302rna-TanjilR_04302_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_04302_La_Tanjil_v1.0rna-TanjilR_04302_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04302_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:529627..529985rna-TanjilR_04302_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:529627..529985Lupinus angustifoliusexon
rna-TanjilR_04302_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:530539..531409rna-TanjilR_04302_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:530539..531409Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04302_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:529627..529985rna-TanjilR_04302_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:529627..529985Lupinus angustifoliusCDS
rna-TanjilR_04302_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:530539..531409rna-TanjilR_04302_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:530539..531409Lupinus angustifoliusCDS


Homology
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD10_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana OX=3702 GN=JKD PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.166e-59
Identity = 106/120 (88.33%), Postives = 112/120 (93.33%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            MATNRFVCEIC KGFQRDQNLQLH RGHNLPWKLKQR+KQEVIKKKVY+CP K+CVHHD  RALGDLTGIKKHYSRKHGEKKWKC KCSKKYAVQSDWKAH+K CGT+EYKC+CGT FSR
Sbjct:   77 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD9_ARATH (Zinc finger protein BALDIBIS OS=Arabidopsis thaliana OX=3702 GN=BIB PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.956e-57
Identity = 100/120 (83.33%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            M TNRF+CE+C KGF+RDQNLQLH RGHNLPWKLKQR  +E +KKKVY+CPEK+CVHHDP RALGDLTGIKKH+SRKHGEKKWKC+KCSKKYAV SDWKAHSKICGTKEY+C+CGT FSR
Sbjct:   63 MTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSR 182
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD2_ARATH (Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=GAF1 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 5.261e-57
Identity = 104/120 (86.67%), Postives = 112/120 (93.33%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            +ATNRFVCEIC KGFQRDQNLQLH RGHNLPWKL+Q++ +EV KKKVYVCPE SCVHHDP RALGDLTGIKKH+ RKHGEKKWKC+KCSKKYAVQSDWKAHSKICGTKEYKC+CGT FSR
Sbjct:   58 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEV-KKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSR 176
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD1_ARATH (Zinc finger protein ENHYDROUS OS=Arabidopsis thaliana OX=3702 GN=ENY PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.119e-56
Identity = 103/120 (85.83%), Postives = 109/120 (90.83%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            MATNRFVCEIC KGFQRDQNLQLH RGHNLPWKL+QR+ +EV +KKVYVCP   CVHHDP RALGDLTGIKKH+ RKHGEKKWKC KCSKKYAVQSDWKAHSKICGTKEYKC+CGT FSR
Sbjct:   56 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEV-RKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSR 174
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD11_ARATH (Protein indeterminate-domain 11 OS=Arabidopsis thaliana OX=3702 GN=IDD11 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.275e-56
Identity = 104/120 (86.67%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            MATNRFVCEIC KGFQRDQNLQLH RGHNLPWKLKQR+ +EVI+KKVYVCPE SCVHHDP RALGDLTGIKKH+ RKHGEKKWKC+KCSKKYAVQSD KAHSK CGTKEY+C+CGT FSR
Sbjct:   94 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKEYRCDCGTLFSR 213
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD7_ARATH (Protein indeterminate-domain 7 OS=Arabidopsis thaliana OX=3702 GN=IDD7 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.086e-55
Identity = 99/120 (82.50%), Postives = 109/120 (90.83%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            MATNRF+CE+C KGFQRDQNLQLH RGHNLPWKLKQR+ ++V++KKVYVCPE  CVHH P RALGDLTGIKKH+ RKHGEKKWKC KCSKKYAVQSDWKAH+K CGTKEYKC+CGT FSR
Sbjct:   87 MATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCDCGTLFSR 206
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD13_ARATH (Protein indeterminate-domain 13 OS=Arabidopsis thaliana OX=3702 GN=IDD13 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.054e-54
Identity = 97/120 (80.83%), Postives = 110/120 (91.67%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            MATNRF CEIC KGFQR+QNLQLH RGHNLPWKLKQ+  +  +KKKVY+CPEKSCVHHDP RALGDLTGIKKH+SRKHGEKKWKC+KCSKKYAV SDWKAH+KICG++E++C+CGT FSR
Sbjct:   59 MATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCDCGTLFSR 178
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD6_ARATH (Protein indeterminate-domain 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IDD6 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.764e-54
Identity = 98/120 (81.67%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            MATNRF+CE+C KGFQR+QNLQLH RGHNLPWKLKQ++ +EV ++KVY+CPE SCVHHDP RALGDLTGIKKHY RKHGEKKWKC+KCSK+YAVQSDWKAHSK CGTKEY+C+CGT FSR
Sbjct:   77 MATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEV-RRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 195
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD12_ARATH (Protein indeterminate-domain 12 OS=Arabidopsis thaliana OX=3702 GN=IDD12 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 2.659e-54
Identity = 97/120 (80.83%), Postives = 107/120 (89.17%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            +ATNRFVCEIC KGFQRDQNLQLH RGHNLPWKLKQ+N +E  KKKVYVCPE +C HH P RALGDLTGIKKH+ RKHGEKKWKC KCSK YAVQSDWKAH+KICGT++Y+C+CGT FSR
Sbjct:   77 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRDYRCDCGTLFSR 196
[Close]
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Match: IDD3_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana OX=3702 GN=MGP PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.662e-54
Identity = 99/120 (82.50%), Postives = 109/120 (90.83%), Query Frame = 1 
Query:    1 MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVCPEKSCVHHDPFRALGDLTGIKKHYSRKHGEXXXXXXXXXXXYAVQSDWKAHSKICGTKEYKCECGTTFSR 360
            MATNRF+CEIC KGFQRDQNLQLH RGHNLPWKLKQR  +EV +K+VYVCPEKSCVHH P RALGDLTGIKKH+ RKHGEKKWKC KC+K+YAVQSDWKAHSK CGT+EY+C+CGT FSR
Sbjct:   65 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSR 183
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_04302 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
IDD10_ARATH4.166e-5988.33Zinc finger protein JACKDAW OS=Arabidopsis thalian... [more]
IDD9_ARATH3.956e-5783.33Zinc finger protein BALDIBIS OS=Arabidopsis thalia... [more]
IDD2_ARATH5.261e-5786.67Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Ara... [more]
IDD1_ARATH1.119e-5685.83Zinc finger protein ENHYDROUS OS=Arabidopsis thali... [more]
IDD11_ARATH3.275e-5686.67Protein indeterminate-domain 11 OS=Arabidopsis tha... [more]
IDD7_ARATH1.086e-5582.50Protein indeterminate-domain 7 OS=Arabidopsis thal... [more]
IDD13_ARATH1.054e-5480.83Protein indeterminate-domain 13 OS=Arabidopsis tha... [more]
IDD6_ARATH1.764e-5481.67Protein indeterminate-domain 6, chloroplastic OS=A... [more]
IDD12_ARATH2.659e-5480.83Protein indeterminate-domain 12 OS=Arabidopsis tha... [more]
IDD3_ARATH5.662e-5482.50Zinc finger protein MAGPIE OS=Arabidopsis thaliana... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 48..78
e-value: 99.0
score: 4.5
coord: 83..103
e-value: 140.0
score: 3.1
coord: 6..28
e-value: 0.017
score: 24.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 8..28
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 6..28
score: 10.512
NoneNo IPR availableGENE3D3.30.160.60coord: 40..131
e-value: 2.8E-8
score: 35.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..267
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 5..103

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_04302_La_Tanjil_v1.0 ID=rna-TanjilR_04302_La_Tanjil_v1.0; Name=rna-TanjilR_04302; organism=Lupinus angustifolius; type=mRNA; length=1783bp
ATGGCAACCAACCGATTTGTATGTGAAATATGCAAAAAGGGTTTTCAGAG
AGACCAAAACCTTCAGCTGCATCTACGAGGGCACAATCTGCCATGGAAGC
TGAAGCAAAGAAATAAacaagaggtgataaaaaaGAAAGTGTACGTGTGC
CCAGAGAAAAGTTGTGTGCACCATGACCCTTTTAGAGCCTTGGGAGATCT
CACAGGGATAAAGAAGCACTATAGCAGAAAGCATGGAGAGAAGAAGTGGA
AGTGCAACAAATGCTCCAAGAAATATGCTGTTCAATCTGATTGGAAGGCC
CATAGCAAGATTTGTGGGACTAAAGAGTACAAATGTGAATGTGGCACTAC
TTTTTCAAGGTACATATGTAGCTACTCCACTCTTCTTTTTCTTAGTTTTA
CACATGTATCATCGCACTTGAgtgcaatcatgtccgagccggaAACTTCC
ACAGTTACGTGGGACCAACTCTCCTAATGGTTATtgtttttcatccacaa
gactgaAACTTAAGACTTTGCATAAGGGGAATCAAatatataccacttga
accatTACCCGTTGGTCGCTACTCCACtctttgatataatatatatatat
atagatggaTTTGCAGTCTCATCCTCatttatgattcatattatgaGTTG
TTACTTTAATTCTGGCCATTGCATTAAAGGCAAAGAAACATATGATTagt
taatttaatttgaaaaggaATTTAATGTGCAATGATTAATTAAATATCAG
AATGTCTTTAACTCATTGTTGAATTTAATGCATGCAGGACATAGATTAAA
TAATCAAACCTAATGTTGTTATTTGAGAATGTtcactaataataaataag
ggtTCTTGATTAGTTTGTTAAATATtccttatattattatatctatGTAT
GTGACAAATCAGGAGGGATGGCTTCATAACTCATAGAGCTTTTTGTGGAG
CCTTGGCTGAACAAAGTGCTAGACTCATAACTTCAGTTCCATCAGTGTTT
AACTTCAGAAATGATCAAGCACCAAGAATTCCTCATAGTTTACCTGGGTT
TCATCAAGAATTTAGTGGGCAAGGATCAGAGCCATTAATAGGAAATTTTG
TGGATTCAGAACATGCATTGAAGCTGAGACTGCCATTATGGTTAGACCAG
ACTAATTCTAATGTATACTCATCAAATGAAGTAGTTCAAACAATGAACAT
GAACATGAACATGAACATGTCTGGCTCATCACAACAAGCACAGTGGCTGA
GTTACAAGTACCCAGAAGCATCATTTCCTGCTGCTATGTCACAAGGACTG
AagcaagaagaagaaggagaaaacAAAGGAAACTtctctcatcatcatca
tagcTTGAGTAGTTCTTTGTACTCTAGTGCTCAGAACTTACAAGGTGGGC
CAACTCACATGTCTACAAGGATCAATGACAATGCaatcttcaacaacaac
tcTAACAATGTCTTTGGCTTGAACAATAATATTGTTGAAATGCAGAAAGT
TTTCAAGCAAGGAAATCAAGAGGGACAAAACTTCAACAACATGGTGGTGA
GTAGTTCATTAAATGATGCAAATTGTACTTCATTTGGGAATTTGGATCAT
ATGGTAATGCCAACAGTAGATGAAGATCAACTAGGATTAACCAGAGACTT
TCTAGGAGTTGGAGATGAAACATTAAGAACACCATTCTTGCAGCACCAAC
AACAACTTCACAACTTCAATCCTATTCATTCAGTACTCAACTTGCATAGC
CACTTCAATAGACACCACAATATGATGAAGTAG
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protein sequence of rna-TanjilR_04302_La_Tanjil_v1.0

>rna-TanjilR_04302_La_Tanjil_v1.0 ID=rna-TanjilR_04302_La_Tanjil_v1.0; Name=rna-TanjilR_04302_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=409bp
MATNRFVCEICKKGFQRDQNLQLHLRGHNLPWKLKQRNKQEVIKKKVYVC
PEKSCVHHDPFRALGDLTGIKKHYSRKHGEKKWKCNKCSKKYAVQSDWKA
HSKICGTKEYKCECGTTFSRRDGFITHRAFCGALAEQSARLITSVPSVFN
FRNDQAPRIPHSLPGFHQEFSGQGSEPLIGNFVDSEHALKLRLPLWLDQT
NSNVYSSNEVVQTMNMNMNMNMSGSSQQAQWLSYKYPEASFPAAMSQGLK
QEEEGENKGNFSHHHHSLSSSLYSSAQNLQGGPTHMSTRINDNAIFNNNS
NNVFGLNNNIVEMQKVFKQGNQEGQNFNNMVVSSSLNDANCTSFGNLDHM
VMPTVDEDQLGLTRDFLGVGDETLRTPFLQHQQQLHNFNPIHSVLNLHSH
FNRHHNMMK
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mRNA from alignment at Chr_LG03-CM007363.1:529627..531409+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_04302_La_Tanjil_v1.0 ID=rna-TanjilR_04302_La_Tanjil_v1.0; Name=rna-TanjilR_04302; organism=Lupinus angustifolius; type=mRNA; length=1783bp; location=Sequence derived from: Chr_LG03-CM007363.1:529627..531409+ (Lupinus angustifolius
ATGGCAACCAACCGATTTGTATGTGAAATATGCAAAAAGGGTTTTCAGAG
AGACCAAAACCTTCAGCTGCATCTACGAGGGCACAATCTGCCATGGAAGC
TGAAGCAAAGAAATAAacaagaggtgataaaaaaGAAAGTGTACGTGTGC
CCAGAGAAAAGTTGTGTGCACCATGACCCTTTTAGAGCCTTGGGAGATCT
CACAGGGATAAAGAAGCACTATAGCAGAAAGCATGGAGAGAAGAAGTGGA
AGTGCAACAAATGCTCCAAGAAATATGCTGTTCAATCTGATTGGAAGGCC
CATAGCAAGATTTGTGGGACTAAAGAGTACAAATGTGAATGTGGCACTAC
TTTTTCAAGGTACATATGTAGCTACTCCACTCTTCTTTTTCTTAGTTTTA
CACATGTATCATCGCACTTGAgtgcaatcatgtccgagccggaAACTTCC
ACAGTTACGTGGGACCAACTCTCCTAATGGTTATtgtttttcatccacaa
gactgaAACTTAAGACTTTGCATAAGGGGAATCAAatatataccacttga
accatTACCCGTTGGTCGCTACTCCACtctttgatataatatatatatat
atagatggaTTTGCAGTCTCATCCTCatttatgattcatattatgaGTTG
TTACTTTAATTCTGGCCATTGCATTAAAGGCAAAGAAACATATGATTagt
taatttaatttgaaaaggaATTTAATGTGCAATGATTAATTAAATATCAG
AATGTCTTTAACTCATTGTTGAATTTAATGCATGCAGGACATAGATTAAA
TAATCAAACCTAATGTTGTTATTTGAGAATGTtcactaataataaataag
ggtTCTTGATTAGTTTGTTAAATATtccttatattattatatctatGTAT
GTGACAAATCAGGAGGGATGGCTTCATAACTCATAGAGCTTTTTGTGGAG
CCTTGGCTGAACAAAGTGCTAGACTCATAACTTCAGTTCCATCAGTGTTT
AACTTCAGAAATGATCAAGCACCAAGAATTCCTCATAGTTTACCTGGGTT
TCATCAAGAATTTAGTGGGCAAGGATCAGAGCCATTAATAGGAAATTTTG
TGGATTCAGAACATGCATTGAAGCTGAGACTGCCATTATGGTTAGACCAG
ACTAATTCTAATGTATACTCATCAAATGAAGTAGTTCAAACAATGAACAT
GAACATGAACATGAACATGTCTGGCTCATCACAACAAGCACAGTGGCTGA
GTTACAAGTACCCAGAAGCATCATTTCCTGCTGCTATGTCACAAGGACTG
AagcaagaagaagaaggagaaaacAAAGGAAACTtctctcatcatcatca
tagcTTGAGTAGTTCTTTGTACTCTAGTGCTCAGAACTTACAAGGTGGGC
CAACTCACATGTCTACAAGGATCAATGACAATGCaatcttcaacaacaac
tcTAACAATGTCTTTGGCTTGAACAATAATATTGTTGAAATGCAGAAAGT
TTTCAAGCAAGGAAATCAAGAGGGACAAAACTTCAACAACATGGTGGTGA
GTAGTTCATTAAATGATGCAAATTGTACTTCATTTGGGAATTTGGATCAT
ATGGTAATGCCAACAGTAGATGAAGATCAACTAGGATTAACCAGAGACTT
TCTAGGAGTTGGAGATGAAACATTAAGAACACCATTCTTGCAGCACCAAC
AACAACTTCACAACTTCAATCCTATTCATTCAGTACTCAACTTGCATAGC
CACTTCAATAGACACCACAATATGATGAAGTAG
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Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:529627..531409+

>rna-TanjilR_04302_La_Tanjil_v1.0 ID=rna-TanjilR_04302_La_Tanjil_v1.0; Name=rna-TanjilR_04302; organism=Lupinus angustifolius; type=CDS; length=1230bp; location=Sequence derived from: Chr_LG03-CM007363.1:529627..531409+ (Lupinus angustifolius
ATGGCAACCAACCGATTTGTATGTGAAATATGCAAAAAGGGTTTTCAGAG
AGACCAAAACCTTCAGCTGCATCTACGAGGGCACAATCTGCCATGGAAGC
TGAAGCAAAGAAATAAacaagaggtgataaaaaaGAAAGTGTACGTGTGC
CCAGAGAAAAGTTGTGTGCACCATGACCCTTTTAGAGCCTTGGGAGATCT
CACAGGGATAAAGAAGCACTATAGCAGAAAGCATGGAGAGAAGAAGTGGA
AGTGCAACAAATGCTCCAAGAAATATGCTGTTCAATCTGATTGGAAGGCC
CATAGCAAGATTTGTGGGACTAAAGAGTACAAATGTGAATGTGGCACTAC
TTTTTCAAGGAGGGATGGCTTCATAACTCATAGAGCTTTTTGTGGAGCCT
TGGCTGAACAAAGTGCTAGACTCATAACTTCAGTTCCATCAGTGTTTAAC
TTCAGAAATGATCAAGCACCAAGAATTCCTCATAGTTTACCTGGGTTTCA
TCAAGAATTTAGTGGGCAAGGATCAGAGCCATTAATAGGAAATTTTGTGG
ATTCAGAACATGCATTGAAGCTGAGACTGCCATTATGGTTAGACCAGACT
AATTCTAATGTATACTCATCAAATGAAGTAGTTCAAACAATGAACATGAA
CATGAACATGAACATGTCTGGCTCATCACAACAAGCACAGTGGCTGAGTT
ACAAGTACCCAGAAGCATCATTTCCTGCTGCTATGTCACAAGGACTGAag
caagaagaagaaggagaaaacAAAGGAAACTtctctcatcatcatcatag
cTTGAGTAGTTCTTTGTACTCTAGTGCTCAGAACTTACAAGGTGGGCCAA
CTCACATGTCTACAAGGATCAATGACAATGCaatcttcaacaacaactcT
AACAATGTCTTTGGCTTGAACAATAATATTGTTGAAATGCAGAAAGTTTT
CAAGCAAGGAAATCAAGAGGGACAAAACTTCAACAACATGGTGGTGAGTA
GTTCATTAAATGATGCAAATTGTACTTCATTTGGGAATTTGGATCATATG
GTAATGCCAACAGTAGATGAAGATCAACTAGGATTAACCAGAGACTTTCT
AGGAGTTGGAGATGAAACATTAAGAACACCATTCTTGCAGCACCAACAAC
AACTTCACAACTTCAATCCTATTCATTCAGTACTCAACTTGCATAGCCAC
TTCAATAGACACCACAATATGATGAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding