rna-TanjilR_04312
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana OX=3702 GN=BLH3 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 7.875e-31 Identity = 66/135 (48.89%), Postives = 86/135 (63.70%), Query Frame = 2 Query: 2864 VGWRYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKGIRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
V RY QYHHQM+ + SSFE V GL +A PY S+AL ISRHFRCL++ I +Q+++I LGE TS + I R DQR ++ + + ++ P WRPQRGLPE +V+IL+AWLFEHFLHP
Sbjct: 247 VDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAIKEQIQVIRGKLGE------RETSDEQGERIPRLRYLDQRLRQQRALHQQLGMVRP---AWRPQRGLPENSVSILRAWLFEHFLHP 372
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=BLH1 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.042e-30 Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 2 Query: 2864 VGWRYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKGIRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
V RY+QYH QMQMV+SSFE AG+ SA Y SLALK+ISR FRCLK I+ Q+K ++ LGE+ S+ G D ++ + ++ + P + WRPQRGLPE AV++L+AWLFEHFLHP
Sbjct: 282 VEQRYRQYHQQMQMVISSFEQAAGIGSAKSYTSLALKTISRQFRCLKEAIAGQIKAANKSLGEEDSVSGVGRFEGSRLKFV-----DHHLRQQRALQQLGMIQHPSNNAWRPQRGLPERAVSVLRAWLFEHFLHP 411
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH7_ARATH (BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana OX=3702 GN=BLH7 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.673e-30 Identity = 63/135 (46.67%), Postives = 93/135 (68.89%), Query Frame = 2 Query: 2864 VGWRYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKGIRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
V YKQY+HQMQ+VVSSF+ +AG +A PY +LAL++ISRHFRCL++ IS Q+ +I + LG + + G I+ R+ DQ+ ++ + ++ +++P H WRPQRGLP+ +V +L+AWLFEHFLHP
Sbjct: 185 VDRNYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAISGQILVIRKSLGGEQD-GSDGRGV----GISRLRNVDQQVRQQRALQ-RLGVMQP--HTWRPQRGLPDSSVLVLRAWLFEHFLHP 311
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=BLH10 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.471e-29 Identity = 65/137 (47.45%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 2864 VGWRYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSG--DQRFQKNKGIRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
V RY QY+HQM+ + SSFE VAGL SA PY S+AL ISRHFR L++ I +Q++++ E LGE G S PR DQR ++ + + ++ P WRPQRGLPE +V++L+AWLFEHFLHP
Sbjct: 249 VDKRYNQYYHQMEALASSFEIVAGLGSAKPYTSVALNRISRHFRALRDAIKEQIQIVREKLGE-----KGGESLDEQQGERIPRLRYLDQRLRQQRALHQQLGMVRP---AWRPQRGLPENSVSVLRAWLFEHFLHP 377
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH6_ARATH (BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=BLH6 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.038e-28 Identity = 65/135 (48.15%), Postives = 89/135 (65.93%), Query Frame = 2 Query: 2864 VGWRYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKGIRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
V RYKQY+ QMQ+VVSSF+ +AG +A PY +LAL++ISRHFR L++ IS Q+ ++ + LGE G+ K I+ + DQ ++ +G ++PQ WRPQRGLPE +V IL+AWLFEHFLHP
Sbjct: 218 VDRRYKQYYQQMQIVVSSFDVIAGYGAAKPYTALALQTISRHFRSLRDAISGQILVLRKCLGEQ----QDGSDGKRVGIISRLKYVDQHLRQQRG------FMQPQ--AWRPQRGLPENSVLILRAWLFEHFLHP 340
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH5_ARATH (BEL1-like homeodomain protein 5 OS=Arabidopsis thaliana OX=3702 GN=BLH5 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.823e-28 Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 2 Query: 2864 VGWRYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKGIRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
V RYKQYH QMQ ++SSFE AGL SA Y +AL++IS+ FR +K++IS Q+K I+++LG+ + D++ +K + ++ + + WRPQRGLPE AV++L++WLFEHFLHP
Sbjct: 146 VEQRYKQYHDQMQTIISSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQ--------------------KEFDEQLKKLGKMAHHHS------NAWRPQRGLPEKAVSVLRSWLFEHFLHP 254 HSP 2 Score: 36.965 bits (84), Expect = 1.823e-28 Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 1 Query: 3325 WFYIYFSVLLLFSYPTDNDKHMLATQTGLSRNQVSGLFL 3441
W + +F L YP D DK MLA QTGL+++QVS F+
Sbjct: 246 WLFEHF----LHPYPRDLDKVMLAKQTGLTKSQVSNWFI 280
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH8_ARATH (BEL1-like homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=BLH8 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.818e-26 Identity = 63/133 (47.37%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 2876 YKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKG--IRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
YK Y+HQ+Q V+SSF +VAGL++ATPY+SLALK SR F+ L+ I++ +K IS + RFQK + I NN QQH+WRPQRGLPE AVA+L+AWLF+HFLHP
Sbjct: 338 YKLYNHQLQTVMSSFNTVAGLNTATPYISLALKRTSRSFKALRTAIAEHVKQISSHSSNGNNN--------------------NRFQKRQRSLIGNNVGFESQQQHIWRPQRGLPERAVAVLRAWLFDHFLHP 450 HSP 2 Score: 61.6178 bits (148), Expect = 4.083e-8 Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 2 Query: 3779 VSNWFINARVRVWKPMVEEIHMLETKGI-TSDNQNTNENERTEGGTRNPRMDKPLSKFGMYSIHESQFQCMEM 3994
VSNWFINARVR+WKPMVEEIH LETK I +D + E +P ++ L+ G+ S+ + M+M
Sbjct: 471 VSNWFINARVRLWKPMVEEIHTLETKAIKNADTSHNIEPSNRPNTVSSPSHEQTLT--GLSGTKRSRLEYMDM 541 HSP 3 Score: 61.6178 bits (148), Expect = 4.298e-8 Identity = 43/118 (36.44%), Postives = 56/118 (47.46%), Query Frame = 1 Query: 1057 GPLGPFTGYATILKSSRFLNYAQQLLQEFCCVSDPRFANAFDVPNRVSEEVSASTSTDAVIETRGVAPKGGNLGSSSSMFYRANENITERVTESSFGFSPQPDYQQKKAKLLYMQEEV 1410
GPLGPFTGYA+ILKSSRFL AQ++L+EFC + S+ +S S ST + G SS + +P + KKAKLL++QEEV
Sbjct: 251 GPLGPFTGYASILKSSRFLEPAQKMLEEFCI-------------SYASKIISRSESTSMEDDDDDDDNLSGFSSSSEPL---------------------EPKNRLKKAKLLFLQEEV 334
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=BLH2 PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 1.741e-25 Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = 2 Query: 2864 VGWRYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKGIRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
V RY Y QMQMVV+SF+ V G +A PY +LA K++SRHFRCLK+ ++ QLK E+LG D +S R +Q ++N+ + ++E Q WRPQRGLPE +V IL+AWLFEHFLHP
Sbjct: 394 VDRRYNHYCEQMQMVVNSFDIVMGHGAALPYTALAQKAMSRHFRCLKDAVAAQLKQSCELLG-DKDAAGISSSGLTKGETPRLRLLEQSLRQNRAF-HQMGMME--QEAWRPQRGLPERSVNILRAWLFEHFLHP 524
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=BLH4 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 8.955e-25 Identity = 60/135 (44.44%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 2864 VGWRYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLISEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKGIRNNKALLEPQQHVWRPQRGLPEPAVAILKAWLFEHFLHP 3268
V RY Y QMQMVV+SF+ V G +A PY +LA K++SRHFRCLK+ ++ QLK E+LG D +S R +Q ++ + + + +Q WRPQRGLPE +V IL+AWLFEHFL+P
Sbjct: 320 VDRRYNHYCEQMQMVVNSFDQVMGYGAAVPYTTLAQKAMSRHFRCLKDAVAVQLKRSCELLG-DKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMM---EQEAWRPQRGLPERSVNILRAWLFEHFLNP 450
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=BLH9 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.784e-24 Identity = 62/136 (45.59%), Postives = 84/136 (61.76%), Query Frame = 2 Query: 2873 RYKQYHHQMQMVVSSFESVAGLSSATPYVSLALKSISRHFRCLKNLISDQLKLI--SEVLGEDLSIPTTGTSYKVDNNITNPRSGDQRFQKNKGIRNNKALLEPQQH--VWRPQRGLPEPAVAILKAWLFEHFLHP 3268
RYKQY+ Q+Q V+ SFE VAGL A PY +LALK++S+HF+CLKN I+DQL+ +++ + + K D ++ S R + G R+ P H VWRP RGLPE AV +L+AWLF+HFLHP
Sbjct: 244 RYKQYYEQLQAVMGSFECVAGLGHAAPYANLALKALSKHFKCLKNAITDQLQFSHNNKIQQQQQCGHPMNSENKTD-SLRFGGSDSSRGLCSAGQRHGF----PDHHAPVWRPHRGLPERAVTVLRAWLFDHFLHP 374 HSP 2 Score: 60.8474 bits (146), Expect = 6.806e-8 Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 2 Query: 3779 VSNWFINARVRVWKPMVEEIHMLETKGITSDNQNTNENERT 3901
VSNWFINARVRVWKPMVEEIHMLET+ + ++ +ERT
Sbjct: 395 VSNWFINARVRVWKPMVEEIHMLETRQSQRSSSSSWRDERT 435 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_04312 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_04312_La_Tanjil_v1.0 ID=rna-TanjilR_04312_La_Tanjil_v1.0; Name=rna-TanjilR_04312; organism=Lupinus angustifolius; type=mRNA; length=4279bpback to top protein sequence of rna-TanjilR_04312_La_Tanjil_v1.0 >rna-TanjilR_04312_La_Tanjil_v1.0 ID=rna-TanjilR_04312_La_Tanjil_v1.0; Name=rna-TanjilR_04312_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=790bpback to top mRNA from alignment at Chr_LG03-CM007363.1:601920..606198- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_04312_La_Tanjil_v1.0 ID=rna-TanjilR_04312_La_Tanjil_v1.0; Name=rna-TanjilR_04312; organism=Lupinus angustifolius; type=mRNA; length=4279bp; location=Sequence derived from: Chr_LG03-CM007363.1:601920..606198- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:601920..606198- >rna-TanjilR_04312_La_Tanjil_v1.0 ID=rna-TanjilR_04312_La_Tanjil_v1.0; Name=rna-TanjilR_04312; organism=Lupinus angustifolius; type=CDS; length=2373bp; location=Sequence derived from: Chr_LG03-CM007363.1:601920..606198- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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