rna-TanjilR_04325

Transcript Overview


Name	rna-TanjilR_04325
Unique Name	rna-TanjilR_04325_La_Tanjil_v1.0
Type	mRNA
Organism	Lupinus angustifolius (blue lupin)
Sequence length	10423
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_LG03-CM007363.1	supercontig	Chr_LG03-CM007363.1:710264..720686 -	Lupinus angustifolius L. Tanjil genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Lupinus angustifolius L. Tanjil genome v1.0	2019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.0	2020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot	2020-01-28

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ananL089	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL231	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR536	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR543	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ancaiR0853	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaR0725	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccR0940	Cajanus cajan Asha genome v1.0	Cajanus cajan
anccR0972	Cajanus cajan Asha genome v1.0	Cajanus cajan
anccR0978	Cajanus cajan Asha genome v1.0	Cajanus cajan
ancaR0774	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancrR0871	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ancrR0940	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
anpsR0621	Pisum sativum Cameor genome v1a	Pisum sativum
anpvR0840	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anpvR0871	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anvuR0715	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anvuR0739	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anasR0815	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasR0866	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anzwsR0707	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
anzwsR0754	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
antifR0719	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR0725	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifR0723	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR0728	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
anvfhR0765	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifR0762	Vicia faba cv. Tiffany genome v1.0	Vicia faba
antifR0785	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR0796	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
anvrvR0688	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvrvR0697	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvuaR0686	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvuaR0706	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvssR0805	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
anvssR0817	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
anvssR0892	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ancanR0666	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ancanR0712	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
anavjR0770	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR0823	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
ancarR0699		Cicer arietinum
ancarR0725		Cicer arietinum
ancarR0758		Cicer arietinum
anccaR0696	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anccaR0728	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anvumR0862	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvumR0867	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvstR0859	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR0875	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR0865	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR0882	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR0870	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR0887	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvunR0683	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anvunR0705	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anpvfR0881	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
anpvfR0911	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Vigan.06G173700.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Cc_v2.0_09495.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vfaba.Hedin2.R1.6g022520.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
PvulFLAVERTChr11.520	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Phvul.011G088100.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vigun11g133100.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Va08G060350.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
LR48_mrnaVigan08g144400	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Vfaba.Tiffany.R1.6g016880.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
rna-XM_014638580.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
jg7989.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-KK1_022252	Cajanus cajan Asha genome v1.0	Cajanus cajan
Psat07G0453100-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
evm.model.Chr11.1274.1.6211316f	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vigun11g133100.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vigst.06G153800.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
Vum_06G01144.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-TanjilR_03202	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-TanjilG_04325	gene-TanjilG_04325_La_Tanjil_v1.0	Lupinus angustifolius	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_04325	rna-TanjilR_04325_La_Tanjil_v1.0-protein	Lupinus angustifolius	polypeptide
rna-TanjilR_04325_La_Tanjil_v1.0	rna-TanjilR_04325_La_Tanjil_v1.0	Lupinus angustifolius	polypeptide

The following CDS feature(s) are a part of this mRNA:

The following exon feature(s) are a part of this mRNA:

Homology

[Close]

BLAST of rna-TanjilR_04325 vs. DB:Swiss
Match: VPS41_SOLLC (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum OX=4081 GN=VPS41 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.608e-71
Identity = 78/92 (84.78%), Postives = 82/92 (89.13%), Query Frame = 2

Query:  914 QVKEFHAHVAVVNDLSFDIAGEYIGSCSDDGSVVINSLFSDEKMRFEYHRPMKAIALDPDYARNSSRRFVAGGLAGNLYLNSKKWLGYRDQV 1189
            QVKEF AH A VNDL FD  GEY+GSCSDDGSVVINSLF+DE+M+FEYHRPMKAIALDPDYAR SSRRFV GGLAG LYLN KKWLGYRDQV
Sbjct:   84 QVKEFAAHTAAVNDLCFDTDGEYVGSCSDDGSVVINSLFTDERMKFEYHRPMKAIALDPDYARTSSRRFVTGGLAGQLYLNVKKWLGYRDQV 175

HSP 2 Score: 124.02 bits (310), Expect = 4.608e-71
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 3

Query: 1281 KVLHSGEGPIHAVKWRTSLVAWANDAGVKVYDTANDQRVTFIERPRGSPRPELLLPHLVWQVSQLF 1478
            +VLHSGEGPIHAVKWRTSLVAWAND GVKVYD +NDQR+TFIERPRG PRPELLLPH+VWQ   L 
Sbjct:  174 QVLHSGEGPIHAVKWRTSLVAWANDTGVKVYDASNDQRITFIERPRGIPRPELLLPHIVWQDDSLL 239

HSP 3 Score: 151.754 bits (382), Expect = 5.840e-43
Identity = 79/153 (51.63%), Postives = 103/153 (67.32%), Query Frame = 2

Query: 10007 ADCVNLLIKYYKEAKHGIYLTNEEDEPRSKRSNTHASQIFDKTPSLRIMEAKSKTRGGGRCCICFDPFSIQNISVIVFFCCHAYHTTCLMDSSYTNSSKKEI------ETTYNGFVDD---------NSHXXXXXXXAGDHRMRCILCTTAAS 10420
            ADCVNLL+KYYKEAK G+ L++E D+  S+R     S + ++T SL+ +E KSKTRGGGRCCICFDPFSI N+S+I FFCCHAYHTTCLM+SS +   KKE        T+Y+ + +             +++E+  +G   MRCILCTTAA 
Sbjct:  808 ADCVNLLVKYYKEAKRGVCLSDEVDDVSSRRGEKSVSHLGERTMSLKSVEVKSKTRGGGRCCICFDPFSILNVSIIAFFCCHAYHTTCLMESSISVGGKKEAGVAAQRTTSYDEYPNGVNDDYEDEDEEEEEEEDATSGALPMRCILCTTAAG 960

HSP 4 Score: 48.9062 bits (115), Expect = 5.840e-43
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1

Query: 9850 VKIITDYRTETSLRHGCNDILKV 9918
            VKI+TDYRTETSLRHGCNDILK 
Sbjct:  786 VKIVTDYRTETSLRHGCNDILKA 808

HSP 5 Score: 102.834 bits (255), Expect = 1.516e-37
Identity = 56/98 (57.14%), Postives = 60/98 (61.22%), Query Frame = 3

Query: 4752 TNASFHKDLLSTVKSWPSVIYSVLPVISAIEPQLNTSSMTDPLKEVSXXXXXXXXXXXXXXXXS*YLY*CAAFLCQTLAELYVIDGQHEKAFSLYADV 5045
            TN SFHKDLLSTVKSWP  IYS  PV SAIEPQ+NTSSMTDPLKE                                LAELYVIDGQH+KAF+LYAD+
Sbjct:  504 TNPSFHKDLLSTVKSWPPRIYSTTPVFSAIEPQINTSSMTDPLKE-------------------------------ALAELYVIDGQHDKAFALYADL 570

HSP 6 Score: 79.7221 bits (195), Expect = 1.516e-37
Identity = 32/38 (84.21%), Postives = 37/38 (97.37%), Query Frame = 2

Query: 4523 ASFNRWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVS 4636
            +++ RWVFHFAHLRQLPVLVPY+PTENPRLRDTAYEV+
Sbjct:  461 SAWERWVFHFAHLRQLPVLVPYIPTENPRLRDTAYEVA 498

HSP 7 Score: 142.124 bits (357), Expect = 3.160e-32
Identity = 70/95 (73.68%), Postives = 80/95 (84.21%), Query Frame = 2

Query: 1631 LMSFCILQDDTLLVIGWGTSVKIASIRTNRHHTANGTYRQVPLSGMTQVDILASFQTSYFISGIAPFGDTLVILAYIPG-EDGEKDFSSTAPSRQ 1912
            L+   + QDD+LLVIGWGTSVKIA IRT +   ANGTY+ + +S + QVDI+ASFQTSYFISGIAPFGD+LVILAYIPG EDGEKDFSST PSRQ
Sbjct:  227 LLPHIVWQDDSLLVIGWGTSVKIALIRTTQSKGANGTYKHMSMSSLNQVDIVASFQTSYFISGIAPFGDSLVILAYIPGEEDGEKDFSSTIPSRQ 321

HSP 8 Score: 97.0561 bits (240), Expect = 6.007e-32
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 2

Query: 2588 QGNAQRPEVRIVTRNNDELSTDALPVHGFEHYKAKDYSLAHSPFSG 2725
            QGNAQRPEVR+VT NNDEL+TDALPVHGFEHYKAKDYSLAH+PFSG
Sbjct:  321 QGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAKDYSLAHAPFSG 366

HSP 9 Score: 66.6254 bits (161), Expect = 6.007e-32
Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 1

Query: 2815 GSSYAGGQWAAGDEPIYYIVSPKDVVIAKPR 2907
            GSSYAGGQWAAGDEP+YYIVSPKDVVIAKPR
Sbjct:  366 GSSYAGGQWAAGDEPLYYIVSPKDVVIAKPR 396

HSP 10 Score: 107.071 bits (266), Expect = 2.105e-31
Identity = 54/108 (50.00%), Postives = 66/108 (61.11%), Query Frame = 3

Query: 8058 QAYEICIRRDLMREQVFLLGRMGNSKQALAVIINKLGDIEEVFYLIIFYYRWFLVSINFNVLNQNFGDFMLNLNANIFTQAVEFVTMQHDDELWEELIKQCLHKPEMV 8381
            +AYEIC+++DL++EQVF+LGRMGN+KQALAVIIN+LGDIEE                                       A+EFV+MQ DDELWEELI+Q  HKPEMV
Sbjct:  684 KAYEICVKKDLLKEQVFILGRMGNAKQALAVIINRLGDIEE---------------------------------------AIEFVSMQQDDELWEELIQQSFHKPEMV 752

HSP 11 Score: 54.6842 bits (130), Expect = 2.105e-31
Identity = 25/27 (92.59%), Postives = 25/27 (92.59%), Query Frame = 1

Query: 7915 VELYADYDPKMLLPFLRSSQHYTLEKV 7995
            VELYADYDPKMLL FLRSSQHYTLEK 
Sbjct:  659 VELYADYDPKMLLTFLRSSQHYTLEKA 685

HSP 12 Score: 104.375 bits (259), Expect = 1.416e-20
Identity = 50/63 (79.37%), Postives = 52/63 (82.54%), Query Frame = 3

Query: 6411 DCKRAVPLLIQNRDLITPPEVVKQLLNANVKCDSRYFLHLYLHSLFEVNPHAGKDFHDMQVEF 6599
            DCKRAV LLIQ RDLI P EVV QL+ A  KCD RYFLHLYLHSLFEVN HAGKD+HDMQVE 
Sbjct:  599 DCKRAVLLLIQQRDLIPPSEVVSQLIAARDKCDYRYFLHLYLHSLFEVNLHAGKDYHDMQVEL 661

HSP 13 Score: 95.1301 bits (235), Expect = 8.379e-18
Identity = 62/88 (70.45%), Postives = 76/88 (86.36%), Query Frame = 1

Query:    1 MAPFPSENGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXPRLKYQRMGGSIPSLLASDAASCIAVAERMIALGTHDGVVYILDFLGNQV 264
            M+P PSENG+   D  +E +EEEED +EEE EE++++EPRLKYQRMG S+PSLL++DAA+CIAVAERMIALGTH G V+ILDFLGNQV
Sbjct:    1 MSPKPSENGI---DGDDERDEEEEDSEEEEAEEEEEDEPRLKYQRMGASVPSLLSADAATCIAVAERMIALGTHGGAVHILDFLGNQV 85

HSP 14 Score: 81.2629 bits (199), Expect = 1.648e-13
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 3

Query: 4347 QVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERYQY------QIPLVV 4481
            +VGSRYLDHLIVERKYAEAASLCPKLLRGSASAWER+ +      Q+P++V
Sbjct:  430 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLV 480

HSP 15 Score: 73.1738 bits (178), Expect = 4.563e-11
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 2

Query: 3683 RNLCILIIRDAEDHIAWLLQHGWHEKALAAVESGQGRSELLDEV 3814
            +++ I   RDAEDHI WLLQHGWHEKAL AVE+ QG+SELLDEV
Sbjct:  388 KDVVIAKPRDAEDHINWLLQHGWHEKALEAVEANQGQSELLDEV 431

[Close]

BLAST of rna-TanjilR_04325 vs. DB:Swiss
Match: VPS41_ARATH (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana OX=3702 GN=VPS41 PE=1 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.208e-65
Identity = 73/103 (70.87%), Postives = 87/103 (84.47%), Query Frame = 2

Query:  893 SYRVISL---QVKEFHAHVAVVNDLSFDIAGEYIGSCSDDGSVVINSLFSD-EKMRFEYHRPMKAIALDPDYARNSSRRFVAGGLAGNLYLNSKKWLGYRDQV 1189
            + R++ L   QVKEF AH A VND++FD  GEYIGSCSDDGSVVINSLF+D EKM+F+YHRPMKAI+LDPDY +  S+RFVAGGLAG+LY+NSKKW G +DQV
Sbjct:   80 TVRILDLLGNQVKEFRAHTAPVNDINFDTEGEYIGSCSDDGSVVINSLFTDDEKMKFDYHRPMKAISLDPDYTKKQSKRFVAGGLAGHLYMNSKKWFGNKDQV 182

HSP 2 Score: 120.553 bits (301), Expect = 1.208e-65
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 3

Query: 1281 KVLHSGEGPIHAVKWRTSLVAWANDAGVKVYDTANDQRVTFIERPRGSPRPELLLPHLVWQVSQLF 1478
            +VLHSGEGPIH+VKWR SL+AWAND GVKVYDTA DQRVTFIE+PRGSPRPE LLPHLVWQ   L 
Sbjct:  181 QVLHSGEGPIHSVKWRGSLIAWANDVGVKVYDTAKDQRVTFIEKPRGSPRPEALLPHLVWQDDTLL 246

HSP 3 Score: 126.331 bits (316), Expect = 2.283e-35
Identity = 70/153 (45.75%), Postives = 105/153 (68.63%), Query Frame = 2

Query: 10010 DCVNLLIKYYKEAKHGIYLTNEEDEPRSKRSNTHAS-----QIFDKTPSLRIMEAKSKTRGGGRCCICFDPFSIQNISVIVFFCCHAYHTTCLMDSSYTNSSKKEI------ETTYNGFVDDNSHXXXXXXX-----AGDHRMRCILCTTAAS 10420
            D VNLL+K + EA+ G+ L++E+D+ R+KR + + S      + DK+ S+++ E KSKTRG  RCC+CFDP SI+  +V+VFFCCHAYH TCLMD++++N++ K        E +Y+  VD+   D++E+E+      G  R+RCILCTTAA+
Sbjct:  824 DIVNLLVKCFNEARRGVCLSHEDDDSRAKREDNNRSSFSQRMVVDKSLSIKMTEVKSKTRGDTRCCMCFDPVSIRGDTVVVFFCCHAYHETCLMDAAFSNNNHKTTKGSSGYEYSYDNGVDEEEEDEEEDEDGDGDRPGRSRLRCILCTTAAA 976

HSP 4 Score: 48.9062 bits (115), Expect = 2.283e-35
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 1

Query: 9850 VKIITDYRTETSLRHGCNDILK 9915
            VKI+TDYRTETSLRHGCNDILK
Sbjct:  801 VKIVTDYRTETSLRHGCNDILK 822

HSP 5 Score: 95.5153 bits (236), Expect = 9.298e-34
Identity = 53/98 (54.08%), Postives = 59/98 (60.20%), Query Frame = 3

Query: 4752 TNASFHKDLLSTVKSWPSVIYSVLPVISAIEPQLNTSSMTDPLKEVSXXXXXXXXXXXXXXXXS*YLY*CAAFLCQTLAELYVIDGQHEKAFSLYADV 5045
            TN S+HK+LLS VKSWP  +YS L VISAIEPQLNTSSMTD LKE                                LAELYVIDGQ++KAFSLYAD+
Sbjct:  510 TNPSYHKELLSAVKSWPRSVYSALTVISAIEPQLNTSSMTDALKE-------------------------------ALAELYVIDGQYQKAFSLYADL 576

HSP 6 Score: 73.9442 bits (180), Expect = 9.298e-34
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 2

Query: 4523 ASFNRWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVS 4636
            +++ RWVFHFA LRQLPVLVPYMPT+NPRL+DT YEV+
Sbjct:  467 SAWERWVFHFAQLRQLPVLVPYMPTDNPRLKDTVYEVA 504

HSP 7 Score: 114.005 bits (284), Expect = 3.002e-32
Identity = 58/110 (52.73%), Postives = 69/110 (62.73%), Query Frame = 3

Query: 8058 QAYEICIRRDLMREQVFLLGRMGNSKQALAVIINKLGDIEEVFYLIIFYYRWFLVSINFNVLNQNFGDFMLNLNANIFTQAVEFVTMQHDDELWEELIKQCLHKPEMVYL 8387
            +AYE+C+++D +REQVF+LGRMGN+KQALAVIINKLGDIEE                                       AVEFV+MQHDD+LWEELIKQCL+KPEMV L
Sbjct:  699 KAYELCVKKDFLREQVFVLGRMGNAKQALAVIINKLGDIEE---------------------------------------AVEFVSMQHDDDLWEELIKQCLNKPEMVGL 769

HSP 8 Score: 50.8322 bits (120), Expect = 3.002e-32
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 1

Query: 7915 VELYADYDPKMLLPFLRSSQHYTLEKV 7995
            VELYA+YD KMLLPFLRSSQHY LEK 
Sbjct:  674 VELYAEYDTKMLLPFLRSSQHYKLEKA 700

HSP 9 Score: 90.8929 bits (224), Expect = 3.281e-30
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 2

Query: 2588 QGNAQRPEVRIVTRNNDELSTDALPVHGFEHYKAKDYSLAHSPFSG 2725
            QGNAQRPE+RIV+ NNDEL+ DALPVHGFEHYKAKDYSLAH+PF G
Sbjct:  327 QGNAQRPEIRIVSWNNDELTMDALPVHGFEHYKAKDYSLAHAPFPG 372

HSP 10 Score: 66.6254 bits (161), Expect = 3.281e-30
Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 1

Query: 2815 GSSYAGGQWAAGDEPIYYIVSPKDVVIAKPR 2907
            GSSYAGGQWAAGDEP+YYIVSPKDVVIAKPR
Sbjct:  372 GSSYAGGQWAAGDEPLYYIVSPKDVVIAKPR 402

HSP 11 Score: 132.109 bits (331), Expect = 4.795e-29
Identity = 67/96 (69.79%), Postives = 81/96 (84.38%), Query Frame = 2

Query: 1631 LMSFCILQDDTLLVIGWGTSVKIASIRTNRHHTANGTYRQVPLSGMTQVDILASFQTSYFISGIAPFGDTLVILAYIPGE-DGEKDFSSTAP-SRQ 1912
            L+   + QDDTLLVIGWGTSVKIASI++++  T  GT+RQ+ +S +TQVDI+ASFQTSY+ISGIAPFGD+LVILAYIP E DGEK+FSST   SRQ
Sbjct:  234 LLPHLVWQDDTLLVIGWGTSVKIASIKSDQQQT--GTFRQIQMSSLTQVDIVASFQTSYYISGIAPFGDSLVILAYIPIEGDGEKEFSSTTTLSRQ 327

HSP 12 Score: 92.0485 bits (227), Expect = 7.309e-17
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 1

Query:  115 PRLKYQRMGGSIPSLLASDAASCIAVAERMIALGTHDGVVYILDFLGNQV 264
            PRLKYQRMGG++P+LL++DAASCIAVA RMIALGTHDG V ILD LGNQV
Sbjct:   42 PRLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLGNQV 91

HSP 13 Score: 77.0258 bits (188), Expect = 2.929e-12
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 3

Query: 4347 QVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERYQY------QIPLVV 4481
            +VG+ YLDHLIVERKYAEAASLCPKLLRGSASAWER+ +      Q+P++V
Sbjct:  436 KVGAGYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAQLRQLPVLV 486

HSP 14 Score: 75.8702 bits (185), Expect = 6.268e-12
Identity = 46/72 (63.89%), Postives = 50/72 (69.44%), Query Frame = 3

Query: 6411 DCKRAVPLLIQNRDLITPPEVVKQLLNANV---------KCDSRYFLHLYLHSLFEVNPHAGKDFHDMQVEF 6599
            DCKRA  L IQNRDLI P EVV QLL A           KCDSRY+L+LYLH+LFEV+   GKDFHDMQVE 
Sbjct:  605 DCKRATVLFIQNRDLIPPSEVVPQLLKAGKNPQVLKAGKKCDSRYYLYLYLHALFEVSHDTGKDFHDMQVEL 676

HSP 15 Score: 67.0106 bits (162), Expect = 3.148e-9
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 2

Query: 3683 RNLCILIIRDAEDHIAWLLQHGWHEKALAAVESGQGRSELLDEV 3814
            +++ I   RDAEDHI WLLQHG+HEKALAAVE+ +GR+EL+D+V
Sbjct:  394 KDVVIAKPRDAEDHINWLLQHGFHEKALAAVEASEGRTELIDKV 437

HSP 16 Score: 63.1586 bits (152), Expect = 5.421e-8
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 2

Query: 9467 VGILLEHTVGNLDPLYIVNKVPNGMEIPR 9553
            VG+LLEHTVGNLDPLYIVN VPNG+EIPR
Sbjct:  767 VGLLLEHTVGNLDPLYIVNMVPNGLEIPR 795

[Close]

BLAST of rna-TanjilR_04325 vs. DB:Swiss
Match: VPS41_HUMAN (Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens OX=9606 GN=VPS41 PE=1 SV=3)

HSP 1 Score: 65.0846 bits (157), Expect = 7.839e-21
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 3

Query: 1284 VLHSGEGPIHAVKWRTSLVAWANDAGVKVYDTANDQRVTFIERPRGSPRPELLLPHLVWQ 1463
            VLH GEG I +VKWR  L+AWAN+ GVK++D  + QR+T + R   S RP++    L W+
Sbjct:  166 VLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWK 225

HSP 2 Score: 60.8474 bits (146), Expect = 7.839e-21
Identity = 29/85 (34.12%), Postives = 49/85 (57.65%), Query Frame = 2

Query:  917 VKEFHAHVAVVNDLSFDIAGEYIGSCSDDGSVVINSLFSDEKMRFEYHRPMKAIALDPDYARNSSRRFVAGGLAGNLYLNSKKWL 1171
             ++F      +N +S D +GE++G CS+DG V +  L+S E+    +  P+K IA+ P + R+S ++FV GG    L L  + W+
Sbjct:   77 TQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGG--KKLLLFERSWM 159

HSP 3 Score: 60.8474 bits (146), Expect = 2.353e-7
Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = 2

Query: 1637 SFCILQDDTLLVIGWGTSVKIASIRTNRHHTANGTYRQVPLSGMTQVDILASFQTSYFISGIAPFGDTLVILAYIP--GEDGEKDF 1888
            S C  +D+  L+IGWGTSVK+ S++  RH +     R +P      V+I++ F+T ++ISG+AP  D LV+L+Y+    E  E+++
Sbjct:  221 SLC-WKDNVTLIIGWGTSVKVCSVK-ERHASE---MRDLP---SRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREY 298

HSP 4 Score: 59.3066 bits (142), Expect = 7.435e-7
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 1

Query:  115 PRLKYQRMGGSIPSLLASDAASCIAVAERMIALGTHDGVVYILDFLGN 258
            P+LKY+R+   +  +L  DAASC+ V ++ +ALGTH G VY+LD  GN
Sbjct:   28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGN 75

[Close]

BLAST of rna-TanjilR_04325 vs. DB:Swiss
Match: VPS41_MOUSE (Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus OX=10090 GN=Vps41 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.872e-20
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 3

Query: 1284 VLHSGEGPIHAVKWRTSLVAWANDAGVKVYDTANDQRVTFIERPRGSPRPELLLPHLVWQ 1463
            VLH GEG I +VKWR  L+AWAN+ GVKV+D  + QR++ + R   S RP++    L W+
Sbjct:  165 VLHEGEGNIRSVKWRGHLIAWANNMGVKVFDITSKQRISNVPRDDISLRPDMYPCSLCWK 224

HSP 2 Score: 60.077 bits (144), Expect = 1.872e-20
Identity = 28/85 (32.94%), Postives = 49/85 (57.65%), Query Frame = 2

Query:  917 VKEFHAHVAVVNDLSFDIAGEYIGSCSDDGSVVINSLFSDEKMRFEYHRPMKAIALDPDYARNSSRRFVAGGLAGNLYLNSKKWL 1171
             ++F      +N +S D +GE++G CS+DG + +  L+S E+    +  P+K IA+ P + R+S ++FV GG    L L  + W+
Sbjct:   76 TQKFDVSPVKINQISLDDSGEHMGVCSEDGKLQVFGLYSGEEFHETFDCPIKIIAVHPQFVRSSCKQFVTGG--KKLLLFERTWM 158

HSP 3 Score: 60.8474 bits (146), Expect = 2.332e-7
Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = 2

Query: 1637 SFCILQDDTLLVIGWGTSVKIASIRTNRHHTANGTYRQVPLSGMTQVDILASFQTSYFISGIAPFGDTLVILAYIP--GEDGEKDF 1888
            S C  +D+  L+IGWGTS+KI S++  RH +     R +P      V+I++ F+T ++ISG+AP  D LV+L+Y+    E  E+++
Sbjct:  220 SLC-WKDNVTLIIGWGTSIKICSVK-ERHASE---MRDLP---SRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREY 297

HSP 4 Score: 59.3066 bits (142), Expect = 7.623e-7
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 1

Query:  115 PRLKYQRMGGSIPSLLASDAASCIAVAERMIALGTHDGVVYILDFLGN 258
            P+LKY+R+   +  +L  DAASC+ V ++ +ALGTH G VY+LD  GN
Sbjct:   27 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGN 74

[Close]

BLAST of rna-TanjilR_04325 vs. DB:Swiss
Match: VPS41_SCHPO (Vacuolar protein sorting-associated protein 41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vps41 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.255e-20
Identity = 35/87 (40.23%), Postives = 57/87 (65.52%), Query Frame = 2

Query:  935 HVAVVNDLSFDIAGEYIGSCSDDGSVVINSLFSDEKMRFEYHRPMKAIALDPDYARNSSRRFVAGGLAGNLYLNSKKWLGYRDQVCK 1195
            H A V DLS D+  E + SCS DG ++I+++ + E    ++ RP+ ++A+DP Y+  SSR+ ++GG AG + L+ K WLG +D V +
Sbjct:   79 HSASVVDLSVDLESENLASCSMDGKMIISNITTRETTVHDFKRPLLSVAIDPYYSTRSSRQVLSGGRAGKVVLSEKGWLGNKDTVLQ 165

HSP 2 Score: 45.4394 bits (106), Expect = 7.255e-20
Identity = 20/60 (33.33%), Postives = 33/60 (55.00%), Query Frame = 3

Query: 1284 VLHSGEGPIHAVKWRTSLVAWANDAGVKVYDTANDQRVTFIERPRGSPRPELLLPHLVWQ 1463
            VL +  G ++ + W T+ +AWA+D G+ VY T   + +  +E P+  P  E+    L WQ
Sbjct:  163 VLQADCGAVYKISWYTTYIAWASDLGITVYSTEFGKVLGRLEPPKRLPNDEIFPYQLFWQ 222

[Close]

BLAST of rna-TanjilR_04325 vs. DB:Swiss
Match: VPS41_YEAST (Vacuolar protein sorting-associated protein 41 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS41 PE=1 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 5.970e-8
Identity = 26/76 (34.21%), Postives = 50/76 (65.79%), Query Frame = 2

Query:  956 LSFDIAGEYIGSCSDDGSVVINSLFSDEKM-RFEYHRPMKAIALDPDYARNSSRRFVAGGLAGNLYLNSKKWLGYR 1180
            L  +  G+Y  + S DG+V+I S+   + + ++++ RP+ ++AL  ++   +SR FV+GG+AG++ L+ + WLG R
Sbjct:  159 LCINTDGKYFATGSIDGTVIIGSMDDPQNITQYDFKRPINSVALHSNFQ--ASRMFVSGGMAGDVVLSQRNWLGNR 232

HSP 2 Score: 26.9498 bits (58), Expect = 5.970e-8
Identity = 15/57 (26.32%), Postives = 24/57 (42.11%), Query Frame = 3

Query: 1299 EGPIHAVKWRTSLVAWANDAGVKVYDTANDQRVTFIERPR-----GSPRPELLLPHL 1454
            +GPI  +     L+ W +D G+   D     ++  I  P         RP+L  PH+
Sbjct:  255 KGPIMGIYTMGDLILWMDDDGITFCDVPTRSQLLNIPFPSRIFNVQDVRPDLFRPHV 311

The following BLAST results are available for this feature:

BLAST of rna-TanjilR_04325 vs. DB:Swiss

BLAST of rna-TanjilR_04325 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 6


Match Name	E-value	Identity	Description
VPS41_SOLLC	4.608e-71	84.78	Vacuolar protein sorting-associated protein 41 hom...	[more]
VPS41_ARATH	1.208e-65	70.87	Vacuolar protein sorting-associated protein 41 hom...	[more]
VPS41_HUMAN	7.839e-21	48.33	Vacuolar protein sorting-associated protein 41 hom...	[more]
VPS41_MOUSE	1.872e-20	48.33	Vacuolar protein sorting-associated protein 41 hom...	[more]
VPS41_SCHPO	7.255e-20	40.23	Vacuolar protein sorting-associated protein 41 OS=...	[more]
VPS41_YEAST	5.970e-8	34.21	Vacuolar protein sorting-associated protein 41 OS=...	[more]

InterPro

Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 12..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 869..907
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	SMART	SM00299	CLH_2	coord: 609..756 e-value: 2.5E-38 score: 143.3
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PFAM	PF00637	Clathrin	coord: 609..752 e-value: 3.3E-22 score: 78.9
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PROSITE	PS50236	CHCR	coord: 609..756 score: 39.727
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 870..942 e-value: 0.0076 score: 25.5
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 172..208 e-value: 210.0 score: 2.4 coord: 84..123 e-value: 0.011 score: 24.9
IPR016902	Vacuolar protein sorting-associated protein 41	PIRSF	PIRSF028921	Vps41	coord: 1..911 e-value: 0.0 score: 1222.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 550..814 e-value: 1.8E-23 score: 84.9
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 8..279 e-value: 2.1E-16 score: 61.7
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 56..262

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_LG03-CM007363.1:710264..720686-
coding sequence from alignment at Chr_LG03-CM007363.1:710264..720686-

mRNA sequence

>rna-TanjilR_04325_La_Tanjil_v1.0 ID=rna-TanjilR_04325_La_Tanjil_v1.0; Name=rna-TanjilR_04325; organism=Lupinus angustifolius; type=mRNA; length=10423bp
ATGGCTCCGTTTCCATCTGAAAACGGCGTCGATGGAGATGATGAGAGAGA
AGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGAAGAAGAAGAAGAAG
ACGATGACGAAGAGCCAAGGCTCAAATACCAGAGAATGGGAGGGAGTATA
CCTTCGCTTCTAGCGAGCGATGCAGCGTCTTGCATTGCGGTTGCGGAAAG
GATGATCGCGCTCGGTACTCACGACGGCGTCGTTTATATCCTTGATTTTC
TCGGCAATCAGGTCAACTATTAATTTTGCTTATGTTTATGTGAAATTTGA
TTATCGTGGCTTAAATTGGAGCTGCTTAGTTCGTTTTCGTTTTAGGCGAT
GTTTTGTGCTTGACAATGGTGCTCGTTTACTAGCTGGTAATAGCATCAAG
CATATGGTGTTCAAGTTTATGTCAGAAATTGTGGCTCTTAAGTTGACAGT
GCTAGAATATTTCGAAGAACTTATGGCCATTAAATAATGACACGTTATTG
ATTAGTAATTAACCACCGTAGTTAATCAATTGTTGAGTGCACCTGGTTTA
TGCAAGACTTTATCGGAGATATGGTATGCATTTGTGTAGTAAATCGCCAT
TTTCGTCCATATATTGTTATTGTCAGGCGTCGGTTATATTAGTCTTGGGC
TTCAGGGAATTAACATATTAGTCTCTGAAACTGTGACATGTCAGTTGACA
TGAGGAAGTAATGTTTACATTCTCAAGGGCTAATGCGATAATTTCGTAAA
GATGGGGACTAATGTCACCGGTGCTTACAATTTCAGAGATTACAATGAGG
GTTTACTCGTAGTGTTCTGTATGGTTGCTTTTAGCTGTTGGCATGTCAAA
GTTAATAAGATGTGTGCCGTTTTTTGTTAATTAAGAAACCTGTCTTACCG
AGTCATCTCTTTACAGGTGAAAGAATTCCATGCCCATGTTGCTGTTGTTA
ATGACCTTAGCTTTGATATAGCGGGTGAATACATTGGGAGCTGTTCTGAT
GATGGATCTGTTGTAATTAACAGCCTTTTTTCTGATGAGAAAATGAGATT
TGAGTATCACCGCCCTATGAAGGCGATCGCTTTGGACCCAGACTATGCAA
GAAACTCGTCTAGGAGATTTGTTGCTGGTGGTTTAGCAGGGAATTTGTAT
TTGAATTCAAAGAAATGGTTAGGCTATCGTGACCAGGTTTGTAAGATTCT
TCTAACCCTTAACCCATGCATTTTTAGTATTACTCCTTTGAGTGTTAATA
ACTGTAAACATTTCCTGTCCTCCTTGAAAAAAGGTTTTGCACTCTGGAGA
AGGTCCAATACATGCTGTGAAGTGGAGAACAAGCCTCGTTGCCTGGGCAA
ATGATGCAGGAGTGAAGGTTTACGATACCGCCAATGACCAGCGTGTAACA
TTTATTGAAAGGCCACGAGGTAGCCCACGGCCCGAGCTTTTGCTTCCTCA
CCTGGTTTGGCAGGTTAGTCAACTATTTGAGTAGGCATGCTGTGTGGTTG
TGTCATTATTGTGCGAAGCAGTGTCCACTCCTAAAATTGAATTCAAGGCT
TGCTAAGTGCTTCTAAGTTTTAACAGAGACAATAGGATTTTATGTGTTTT
CATATAATTTCTTGACAAGAATGATGTAGATTAATGTCCTTCTGTATTTT
ACAGGATGACACTCTCTTGGTTATTGGTTGGGGAACATCTGTCAAAATTG
CTTCAATAAGGACAAACCGCCATCACACAGCCAATGGGACATATAGGCAA
GTTCCTTTGTCTGGTATGACCCAGGTGGATATTCTAGCATCATTCCAAAC
TAGCTATTTCATCTCAGGAATTGCTCCCTTTGGTGATACTTTGGTTATTC
TAGCTTATATTCCTGGAGAAGATGGAGAAAAGGATTTTAGTAGCACCGCT
CCTTCACGACAGGTATTTATATGTTCCTTGCACGTGATATGATGAAATGA
AAGTATTTTACTTCTGATCCTGTCCGATAATACTGTAGATGTCTTCCTTG
CCTCTTCCCACTTCATGATCTTCAACTAGTTTTCATAGTTGATTTTTATG
TTCACTTCAATAAAGGGCTACCTCCATGCATTATTTTACAGTTGTCATAA
TTCTGGTCCTTAATACTTGGACACATGGAATTTTAATTTTTTAGTGTGAA
CTGTGGAGGATCAAATAGTGTGATTAACTCAATTGAAATTTTTAGATTGC
TTTATAATGTTGAAAAAGTCAGTGTCAAACTGGTATCTGCTGCTTCCTAC
AAATTAATTTTTTCATATACATATTTTTCTTTTGGCAAATCATTTTATTT
ACATCTCGCTATTCTGTTATTTAGTGTGGTGTGTCTCATTGAGGTCATAT
GTCATCTGTATTACTGACACTGCTCCTTACTGGCATCAATTGTCTATAGA
GTATAGACTATAACTTTAGAGAATGTCTAACACTAACTGCTTAACTTCAA
TTGCACATAAATGTGAAAAGCAGTTTAATGTGATTGTATATCATAAAAGG
AGAGAAAACAAAGCTATGCTTGCATCATTTTCTTCATTGGATATAAGAAA
TTGATTTGTTCATAAAGTGAGTGGATGTAATTTTGAACAGGGCAATGCAC
AAAGACCAGAAGTACGAATAGTAACACGGAACAATGATGAACTCTCGACA
GATGCTCTACCCGTGCATGGCTTTGAGCATTACAAGGCAAAGGACTATTC
TCTTGCTCATTCCCCCTTCTCAGGTTAGCATTTAATTAGTTTTGTTTATA
ATCTATATTTTGTGTATGAATTGGGCTTCCATAATAATAATAATGTTTTT
TTCATTCAAATGTAGGCAGCAGTTATGCTGGTGGTCAGTGGGCTGCAGGG
GATGAACCAATTTACTATATCGTATCCCCGAAGGATGTAGTTATTGCAAA
GCCAAGGTTATTGTCAACTTGACTTGATCCTATTATACTGTTCTAAGTGA
TCAATGCACTCATGTTGAATTAATCACCAAAAAAGATAAAAGGGAGAAAA
GTAGGATGTTATGTTCTTTAAGACTTCATCCCCCCTTACTTTAAATGCTT
TATTCTTTTTCTGAGTATGGGATTCTGGTTGAAATAGAAGAAATAATCTT
TTATAAAAAATAATAAGTAGAATAAATAATCTTTCTTGTGTTCAAGTTGT
CTTAAACCTCATTGTATTCACCTAGTGGTGGAGGTTGCTATTCTATTTAG
GTTTATATATGTTTCATGATGTGCCCTTGGCTTGCCACATGTCAGCTGAC
TGCTTGCCCTTAAGAATGTTATGTTTCTGTGAGCCTGTGACTTTGTTTTG
GTGTACAATACTTCATTCCTGTCCAGTTTCTCAGTGATTGTGTTGTTCCT
GTGTTATTTAATTCCACATATCATAGAATGATAATTTAAAGGCCGTTATT
TGTTACTAATTTTAGTCAAGAAAATTCAGATGCCTCAAAGTGACTACATA
GAAAGGGCAATGCTCTCCTTTATGTCAGACATCCTTCACATTTGTTATAT
TCCCTTTGATGGAAAAGCAATTTAACTACCATTTCTCCCAAGGGACTAGA
ACAAGTAAATCAAAACAAATGAAATTTCTTGTTTACCTTAAATTTCTTAT
TATATGTGTACATGGAATTCTTCTAATATGCCTAAAATGTTATGCTCTTT
TTATAAGCTGGTAACGAATTTAAAACATGGAGAGAAATTTATGCATTTTA
ATTATCAGGGATGCTGAAGATCATATTGCCTGGCTTCTTCAACATGGGTG
GCATGAGAAAGCTTTAGCTGCAGTTGAATCTGGACAGGGACGGAGTGAAC
TGCTTGATGAGGTATTTATGTTTATATTAAATCCATATGTTTTTATACTT
CCTTTAATGGTTATTAGAGTTAAATATGTATTGTATAGAAAAAGGCAAGT
TTGTGGCACATAAAATGAAGTTAGGTTATCCATGTATGCTTATGAAGTCA
ATCAATTATGTTGGTTGTGTGTAGTTGAAGGTTCCTCAACTATTTTGTTC
CTACAGTTGTTTTTCATCATTTATTTGCTTTTAATAACAGTGTGTATAAT
ATTTGACACAAGCTCAAAGTGAAGTGGAATGGAACCTACAATGTCATCTA
TTTGGTGATTTATGGTTTCACTATATATCACTCCGTTGTCCTTATATCTA
TTGAGAAACATAAAATTGTCCTTATATCTAGTGAAGGGTGATTACCTTTT
TCTTCTGAAGTTTCCTCCTTGAGATTTTATTATCATGGTATTGCTAATAT
TTCTTGAGTCATCATTCGTACATATTATGTATCACATATTTTTCTAAGAA
TTCTTGGTGAACTTGTCTGTTTGGACGCAACTGAGATTTATCTTTGCAGG
TGGGTTCTAGGTACCTTGACCATCTGATCGTGGAAAGAAAATATGCTGAA
GCAGCTTCTTTGTGTCCCAAGTTGCTACGAGGGTCAGCCTCTGCATGGGA
GAGGTACCAGTACCAAATACCATTAGTTGTTAATCTGTTGTACAGTTCTT
TTTGGTAATTGAGTATCAATGGGCTTCCTTCAACAGATGGGTTTTCCACT
TTGCACACCTTCGTCAACTCCCTGTTTTGGTTCCTTACATGCCTACAGAA
AACCCTAGACTGCGCGATACTGCTTATGAGGTTAGCTAACGCCTAAAACA
AAGTAGTCTTAGTTTTAAGTTGTGTTTACATAGTATCTATAATAAACTAA
GTTGGGATTTATTTGCTTTTGGTTCTACAGGTTGCTCTTGTTGCATTAGC
TACAAATGCATCTTTTCATAAGGACCTTTTGTCTACTGTTAAATCATGGC
CATCTGTAATTTATTCTGTGTTGCCTGTTATTTCTGCTATTGAACCTCAG
CTTAATACATCATCCATGACTGATCCACTCAAGGAGGTTAGTCTGACTAT
AATTATATTTGCATTTTGAAATTTGAATATCTTTACCATCTCTTGATACT
TATATTAATGTGCTGCTTTTCTATGTCAGACATTAGCAGAGTTGTATGTG
ATTGATGGGCAACACGAGAAAGCCTTCTCATTGTATGCTGATGTAGGTGG
TCTTAATTAATATTTATTGTACTCAGGAAGCAATTACATTGAGTGATTGA
CACAGATACTTTGATTTTATTCTTTTGTGTATTTGTTGTGATATACCAAT
TTACTTTTCCCCTTTTCTGAAACTTTCAGCTTCTAAAACCTGAAGTGTTT
GACTTCATTGACAGACATAACCTGCATGATGCAATTCGTGAAAAGGTATG
TGGGATTTGTTAAAAAGAGAATTTTTCTCGGTAGTACGTTTTCTCTGTAG
TTTTAGACTCGGTTAAGATCAGCTGATGTGCAAATCATGTCTCCGCTGGA
ATTTGATTCTTAAGCATTAATGCACCTGAAGAATCTTTTTACATCTTTTT
GGGTAGTATACTAGGTCGTGGCTATAAATGTTGTCATATCTTTCACATAT
TTTGTTTTCCAAATAACAGATATAATCATAGATTTATTGAATGCATAGAA
AAATGGATGAACCGGCAATATCACATTGCAAATATCTGGAACTAATTTAT
TAGAATTTGATTGTTCCTAGAATATTTGAAGAGGAGAAAAAATTGTTGAA
TTTAATCTTGAAGTTTGAGTTTTTTTTCTTCTAATTTTACTTGTTACCAT
TTATGTTAGAAAACCATAGCTTTAGGGAGAGAGGGGAAAATGATATGTGA
GGCATCCCATAATATTTTGAAAGTTACTCAAGATGGCAGTGAAATATTAG
CAGATGAATCACTAGCACAAGTACAACCACCAAGTTTTTTTCCCGTTTCT
ACATAACTACATAAGCAAATCATATCTACTTGTTAATACTTTGACAGTTT
GACCGCAAAATGACCCCCACACCTTCTATTTTGATAGCATCATAAGTTGC
TAATTACTCAAATCCAAAGCACATTCCTTGTTACTATTATATCCTTAATA
CTGCCTCTCAAGCTACTAAGCTTTCAGCTTGTTAAAAAATAAATAAAATC
AATTCTATAAAACAAAGAATGTAAAACCTGATCCCACCAACCAAAGAACT
TTACCTAACTATATACCTTTATTTATTCTAATATAATACAACCATGTGAT
ATGAACCTTGGTAGAACCACACTGCATAAGCTAGCTATCATGGTTAGAGA
ACCTAAGATATAAAGTCCACACCAGAATCCCATACTTCCAAGTTCTAATA
TTTGACTCAAGTCTCATACCTTCCAATTGGATTCTAACACCGCATATTGA
CACTACACCTTTTACATGGCATGCTTAATGAGTAATTAATTGTTTAGTGG
CCTAAGCACTTTCATTATTAATATACTCAGTCCTTAAAACTATTTATTTG
ATCACTTGAATCTCATTTGTCTAACCTGTGCTTGTTCAGGTAGTTCAACT
GATGATGTTAGATTGCAAGCGTGCAGTTCCTCTATTAATCCAAAATAGGG
ACTTAATTACTCCACCTGAAGTTGTGAAGCAACTTCTAAATGCCAATGTT
AAGTGTGATAGCCGATATTTTTTACATTTATATCTTCATTCATTGTTTGA
AGTAAATCCACATGCTGGGAAGGACTTTCATGATATGCAGGTAGAGTTTT
GTTTCTTTCATTTAACCTTTGCAAACTTCTTTGTGTGGGATTCTAGATGC
AATTCAATTTATGAAAGCTATTTGCATTATGAGTTTGGCCCAAAGTAATT
ATTGTGTTCAATTTTTTATTATAGAAATAACTTACAGACCTCGTTATGAA
CATCTATGCCTTTATAATGTTCCAAGACAATGACATAATCTGGCTGAAAA
GGAAATATAAGACCCTCGATTGACTAAATAATAATTGAGTAATGATATAT
AAAAAGTGTAGCTCACTGCATGAGGCTCCCATTCAGTAGGGTATGGGGAT
GATAGATGTATATAGTCTTATCCTCACAAGCGAAGAGCAATCGTATATCC
TCCTACAAAATCAGTATACAAATCCTCCTACGCATTATGATGGTGACATG
TGTCATTTGTAGGCCATTCATTAATAAGTACAACCTTGTGGCACTTGTCA
CCGTCATGTGTGTAGGAGGATTTGCAGGCTAATTTTGTAGGTCATATCAT
TTTTCTTAATAAATACTATCATGGTTAAGAAAGACTTATATATTCATGTC
TTGTCAATGAACATGATTTATGATAGAGCATTATGATATTATTCAATCCA
TATAGCCGACCCCATCTAGCAGGATAAAGGTTTGGTTGTTTGTTTTTCTT
TATAACAAACCTTGTATGTGATACGTGATGCGGCAAATTTGGTATGCGGT
AAGTAGGGTAAATGAGTGAACCATGTAAACAACCAAAACTCTATACTTTC
ATGCGCCGGACATGAGTAGATAACTTTTAAATACCATATAAGGTGTCTTC
TCCAATCTTGTTCTACCAGAATCCTGTATGTATACATTTATTTACAAGCA
ACTAGAATGGAGGAGGTTTTTTTCCAACACCTTCAACTTGGTCCTGTATA
GTCGAGTCCTTAGGTACATGTTTTTGGATTCTTAGGCACACTGTTTTGCT
GCTTTATGTGGACTGTGGGACCTTCCCCTGTTTTTACACAAACAGCAAAT
CCATCTGCATCTCTAGTTGTTGCATAATAGATCAGGGGTGGCTATCGTTG
TAATAGAATAATAAATCAGTTTCGGTCTAATTACAGTTCAATCTATTTTA
CCAGCAATTATTAGCTATTGCTACCAATTTGTGTTTGCAACCTGTAGAGC
CATGGCCTTGTAGTCATACGATTCTTTCTTGTGGTCCAGCCACACTGTTA
TTCATTTGTCCTTTTTATCTCTTTATTCTTCTCTCACTTTAGTGGTTTGT
ATGTGCTGCCTGCGATTAAATTCTTTTTTTCTCAGTTAATAGCATCCTTT
TGTCTACTGCGTAGGTAGAGCTCTATGCAGACTATGATCCAAAGATGCTG
CTACCTTTTCTTCGAAGCAGTCAACACTATACCCTCGAGAAGGTTTGTGA
TCAAACTTTGAAAGTTATATACATATGTTCATGTGAACTAAATTCTCAAT
TGTTTTTCAGGCTTATGAAATTTGCATTAGAAGAGACCTAATGAGAGAGC
AAGTCTTCCTCCTAGGGAGGATGGGAAACTCAAAACAAGCCCTGGCTGTT
ATTATAAACAAATTAGGGGATATAGAGGAGGTATTTTATTTAATAATTTT
CTACTATAGGTGGTTTTTGGTTTCAATCAATTTTAATGTCTTGAATCAGA
ACTTCGGGGATTTTATGTTGAATTTGAATGCTAATATTTTTACGCAGGCT
GTAGAGTTTGTCACCATGCAGCATGATGATGAACTTTGGGAAGAACTAAT
CAAGCAGTGCCTACACAAACCTGAAATGGTATATCTTGATAACTGAATTG
TATATTTAAGATATAGGCCTGTTTGATTTCCTACTTTGAGAACAGTTTTT
TGTTTTAAAGATGATATCTGTTTGGGAATTGGTCCCTATTCCATATTTTT
AAAGACTGGTAAGATATCAGCTGTTTTCGTAACCAGAATCCTGGCACATC
TTTTAGATGTTCTCTGACTCTGTTTTCTTTTTATTCTCTTTTCCAAAAAC
ATGGTGGAGATTTTCGTTGAATATCTCAATTACATTTTACACTCTCACCT
TTCCTCTGTGTTTTCCCCTTCATTTCCTGCATCTCATCAGTAGGCCTTTC
ATCTATGCTATCTTTTTTTGTTGGTATAACCAAGGGTATCCCCAGGAACT
AATCCCTTTTGGGGTATGTATCTATTCCTCCTAACAAGTATCTCTCCCAG
GATCTAGTAGGCCTTACTCCACTTGATCAACGCCTTGTTGGTACATCTAT
GCTATCTTGGTCAGTGCTATTCCATTACCGCCGACAATGTCTGAAGGCTG
AACTGCATTTCTCTGTCTCATCATATGCATCTAGTGCATGCTATTGTCCA
TATGGACTGTGACAAGCACCCTATCTTCTCTTGTAACACCATTTCTTACC
GTAGCTTTTTCTGGAATAAATGAACTAAGATTCTCTCCCGTGGGATAGCC
TGGTATCAAAAAGATCCACATAGCCTTCAGTTTGGAGGTGCTTCTAGATG
ATGAAGTGTGGCCTCATAGAGATCATTGCATTCTGCATCTACGGTGAAAC
ACTTTTTGGTCACTTGTGCCTTTCTAGATGGAATGGATGTGGGATCATTG
TACAAGTTTTTTTTGAGGAAAAAATATAAATAGTTCATGGGAACAAAGTT
TAAAATTATTATTGTGTTGTTTTTCTATAAAGAAAATTGTTTTTCTAACT
GAAAATTTTCTTCAATATGTTAAACAAAACATAGTTTCCTGTGATAGAAT
TTGGAAATCTGTTTCAGAAACCAGAACAACTGAAACAGCAACAAGGATGG
TCAATATCAATGTATTTTGTATTCCTTTCTCAAACCTTTTCTAAGGTTGG
TTCTGGTAATTGACAGGTTGGCATACTACTGGAGCACACAGTTGGAAACC
TTGATCCCCTCTACATTGTAAATAAGGTTCCAAATGGGATGGAAATACCT
CGGTAAGTAATAAAATTGTCTTAACCAAAATTTCATTATGGTTTCTAATC
TTGCAACATATAAAAGGAATAAAATTAGTGAGTTGTAGATCACATTAAGT
AGGACTAGGAGATGCCAATCTATCAGAGTATCAGGTTCTTATTATGCATA
TGCAAGTTGTTCAACGTGCTTCGAATTTTAACTGATTACTCAGATAGCTA
GATCATTCTGGCTTCCTAATTCCAGCTATATTCGATAGCGTACTGTTTTC
CAGACGGTGATTTCTTTATCTGCTTTTCTATAGGCTCAGGGATCGGTTGG
TTAAAATTATCACTGATTACAGAACTGAAACATCACTTAGACATGGGTGT
AATGATATCCTGAAGGTGCTTTTCTCCCTCTCCATTTCTCTAGTACAAGG
AATGTTTTTTTTTTAAAATATAAGATATATTGCTGATTTGTTGTCATTAA
ATATAGGCGGACTGTGTCAACCTCTTGATTAAGTATTACAAAGAGGCAAA
GCATGGAATTTACCTAACTAATGAAGAAGACGAGCCACGATCTAAAAGGA
GCAATACTCATGCTTCTCAGATATTTGACAAAACCCCAAGTCTGAGAATA
ATGGAAGCGAAGTCAAAGACAAGAGGGGGTGGAAGATGCTGTATATGTTT
TGACCCCTTTTCTATACAGAATATATCAGTCATTGTTTTCTTTTGCTGTC
ACGCTTATCATACTACTTGTCTTATGGATTCCTCCTACACTAATAGTAGC
AAGAAAGAGATAGAAACCACTTACAATGGTTTTGTGGATGATAATAGTCA
TGACGATGATGAAGAGGAAGAGGCCGGTGATCATCGTATGCGATGTATAT
TGTGTACTACTGCCGCTAGTTGA

protein sequence of rna-TanjilR_04325_La_Tanjil_v1.0

>rna-TanjilR_04325_La_Tanjil_v1.0 ID=rna-TanjilR_04325_La_Tanjil_v1.0; Name=rna-TanjilR_04325_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=947bp
MAPFPSENGVDGDDEREEEEEEEEDEDEEEEEEDDDEEPRLKYQRMGGSI
PSLLASDAASCIAVAERMIALGTHDGVVYILDFLGNQVKEFHAHVAVVND
LSFDIAGEYIGSCSDDGSVVINSLFSDEKMRFEYHRPMKAIALDPDYARN
SSRRFVAGGLAGNLYLNSKKWLGYRDQVLHSGEGPIHAVKWRTSLVAWAN
DAGVKVYDTANDQRVTFIERPRGSPRPELLLPHLVWQDDTLLVIGWGTSV
KIASIRTNRHHTANGTYRQVPLSGMTQVDILASFQTSYFISGIAPFGDTL
VILAYIPGEDGEKDFSSTAPSRQGNAQRPEVRIVTRNNDELSTDALPVHG
FEHYKAKDYSLAHSPFSGSSYAGGQWAAGDEPIYYIVSPKDVVIAKPRDA
EDHIAWLLQHGWHEKALAAVESGQGRSELLDEVGSRYLDHLIVERKYAEA
ASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVA
LVALATNASFHKDLLSTVKSWPSVIYSVLPVISAIEPQLNTSSMTDPLKE
TLAELYVIDGQHEKAFSLYADLLKPEVFDFIDRHNLHDAIREKVVQLMML
DCKRAVPLLIQNRDLITPPEVVKQLLNANVKCDSRYFLHLYLHSLFEVNP
HAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIRRDLMREQ
VFLLGRMGNSKQALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHK
PEMVGILLEHTVGNLDPLYIVNKVPNGMEIPRLRDRLVKIITDYRTETSL
RHGCNDILKADCVNLLIKYYKEAKHGIYLTNEEDEPRSKRSNTHASQIFD
KTPSLRIMEAKSKTRGGGRCCICFDPFSIQNISVIVFFCCHAYHTTCLMD
SSYTNSSKKEIETTYNGFVDDNSHDDDEEEEAGDHRMRCILCTTAAS

mRNA from alignment at Chr_LG03-CM007363.1:710264..720686-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-TanjilR_04325_La_Tanjil_v1.0 ID=rna-TanjilR_04325_La_Tanjil_v1.0; Name=rna-TanjilR_04325; organism=Lupinus angustifolius; type=mRNA; length=10423bp; location=Sequence derived from: Chr_LG03-CM007363.1:710264..720686- (Lupinus angustifolius
ATGGCTCCGTTTCCATCTGAAAACGGCGTCGATGGAGATGATGAGAGAGA
AGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGAAGAAGAAGAAGAAG
ACGATGACGAAGAGCCAAGGCTCAAATACCAGAGAATGGGAGGGAGTATA
CCTTCGCTTCTAGCGAGCGATGCAGCGTCTTGCATTGCGGTTGCGGAAAG
GATGATCGCGCTCGGTACTCACGACGGCGTCGTTTATATCCTTGATTTTC
TCGGCAATCAGGTCAACTATTAATTTTGCTTATGTTTATGTGAAATTTGA
TTATCGTGGCTTAAATTGGAGCTGCTTAGTTCGTTTTCGTTTTAGGCGAT
GTTTTGTGCTTGACAATGGTGCTCGTTTACTAGCTGGTAATAGCATCAAG
CATATGGTGTTCAAGTTTATGTCAGAAATTGTGGCTCTTAAGTTGACAGT
GCTAGAATATTTCGAAGAACTTATGGCCATTAAATAATGACACGTTATTG
ATTAGTAATTAACCACCGTAGTTAATCAATTGTTGAGTGCACCTGGTTTA
TGCAAGACTTTATCGGAGATATGGTATGCATTTGTGTAGTAAATCGCCAT
TTTCGTCCATATATTGTTATTGTCAGGCGTCGGTTATATTAGTCTTGGGC
TTCAGGGAATTAACATATTAGTCTCTGAAACTGTGACATGTCAGTTGACA
TGAGGAAGTAATGTTTACATTCTCAAGGGCTAATGCGATAATTTCGTAAA
GATGGGGACTAATGTCACCGGTGCTTACAATTTCAGAGATTACAATGAGG
GTTTACTCGTAGTGTTCTGTATGGTTGCTTTTAGCTGTTGGCATGTCAAA
GTTAATAAGATGTGTGCCGTTTTTTGTTAATTAAGAAACCTGTCTTACCG
AGTCATCTCTTTACAGGTGAAAGAATTCCATGCCCATGTTGCTGTTGTTA
ATGACCTTAGCTTTGATATAGCGGGTGAATACATTGGGAGCTGTTCTGAT
GATGGATCTGTTGTAATTAACAGCCTTTTTTCTGATGAGAAAATGAGATT
TGAGTATCACCGCCCTATGAAGGCGATCGCTTTGGACCCAGACTATGCAA
GAAACTCGTCTAGGAGATTTGTTGCTGGTGGTTTAGCAGGGAATTTGTAT
TTGAATTCAAAGAAATGGTTAGGCTATCGTGACCAGGTTTGTAAGATTCT
TCTAACCCTTAACCCATGCATTTTTAGTATTACTCCTTTGAGTGTTAATA
ACTGTAAACATTTCCTGTCCTCCTTGAAAAAAGGTTTTGCACTCTGGAGA
AGGTCCAATACATGCTGTGAAGTGGAGAACAAGCCTCGTTGCCTGGGCAA
ATGATGCAGGAGTGAAGGTTTACGATACCGCCAATGACCAGCGTGTAACA
TTTATTGAAAGGCCACGAGGTAGCCCACGGCCCGAGCTTTTGCTTCCTCA
CCTGGTTTGGCAGGTTAGTCAACTATTTGAGTAGGCATGCTGTGTGGTTG
TGTCATTATTGTGCGAAGCAGTGTCCACTCCTAAAATTGAATTCAAGGCT
TGCTAAGTGCTTCTAAGTTTTAACAGAGACAATAGGATTTTATGTGTTTT
CATATAATTTCTTGACAAGAATGATGTAGATTAATGTCCTTCTGTATTTT
ACAGGATGACACTCTCTTGGTTATTGGTTGGGGAACATCTGTCAAAATTG
CTTCAATAAGGACAAACCGCCATCACACAGCCAATGGGACATATAGGCAA
GTTCCTTTGTCTGGTATGACCCAGGTGGATATTCTAGCATCATTCCAAAC
TAGCTATTTCATCTCAGGAATTGCTCCCTTTGGTGATACTTTGGTTATTC
TAGCTTATATTCCTGGAGAAGATGGAGAAAAGGATTTTAGTAGCACCGCT
CCTTCACGACAGGTATTTATATGTTCCTTGCACGTGATATGATGAAATGA
AAGTATTTTACTTCTGATCCTGTCCGATAATACTGTAGATGTCTTCCTTG
CCTCTTCCCACTTCATGATCTTCAACTAGTTTTCATAGTTGATTTTTATG
TTCACTTCAATAAAGGGCTACCTCCATGCATTATTTTACAGTTGTCATAA
TTCTGGTCCTTAATACTTGGACACATGGAATTTTAATTTTTTAGTGTGAA
CTGTGGAGGATCAAATAGTGTGATTAACTCAATTGAAATTTTTAGATTGC
TTTATAATGTTGAAAAAGTCAGTGTCAAACTGGTATCTGCTGCTTCCTAC
AAATTAATTTTTTCATATACATATTTTTCTTTTGGCAAATCATTTTATTT
ACATCTCGCTATTCTGTTATTTAGTGTGGTGTGTCTCATTGAGGTCATAT
GTCATCTGTATTACTGACACTGCTCCTTACTGGCATCAATTGTCTATAGA
GTATAGACTATAACTTTAGAGAATGTCTAACACTAACTGCTTAACTTCAA
TTGCACATAAATGTGAAAAGCAGTTTAATGTGATTGTATATCATAAAAGG
AGAGAAAACAAAGCTATGCTTGCATCATTTTCTTCATTGGATATAAGAAA
TTGATTTGTTCATAAAGTGAGTGGATGTAATTTTGAACAGGGCAATGCAC
AAAGACCAGAAGTACGAATAGTAACACGGAACAATGATGAACTCTCGACA
GATGCTCTACCCGTGCATGGCTTTGAGCATTACAAGGCAAAGGACTATTC
TCTTGCTCATTCCCCCTTCTCAGGTTAGCATTTAATTAGTTTTGTTTATA
ATCTATATTTTGTGTATGAATTGGGCTTCCATAATAATAATAATGTTTTT
TTCATTCAAATGTAGGCAGCAGTTATGCTGGTGGTCAGTGGGCTGCAGGG
GATGAACCAATTTACTATATCGTATCCCCGAAGGATGTAGTTATTGCAAA
GCCAAGGTTATTGTCAACTTGACTTGATCCTATTATACTGTTCTAAGTGA
TCAATGCACTCATGTTGAATTAATCACCAAAAAAGATAAAAGGGAGAAAA
GTAGGATGTTATGTTCTTTAAGACTTCATCCCCCCTTACTTTAAATGCTT
TATTCTTTTTCTGAGTATGGGATTCTGGTTGAAATAGAAGAAATAATCTT
TTATAAAAAATAATAAGTAGAATAAATAATCTTTCTTGTGTTCAAGTTGT
CTTAAACCTCATTGTATTCACCTAGTGGTGGAGGTTGCTATTCTATTTAG
GTTTATATATGTTTCATGATGTGCCCTTGGCTTGCCACATGTCAGCTGAC
TGCTTGCCCTTAAGAATGTTATGTTTCTGTGAGCCTGTGACTTTGTTTTG
GTGTACAATACTTCATTCCTGTCCAGTTTCTCAGTGATTGTGTTGTTCCT
GTGTTATTTAATTCCACATATCATAGAATGATAATTTAAAGGCCGTTATT
TGTTACTAATTTTAGTCAAGAAAATTCAGATGCCTCAAAGTGACTACATA
GAAAGGGCAATGCTCTCCTTTATGTCAGACATCCTTCACATTTGTTATAT
TCCCTTTGATGGAAAAGCAATTTAACTACCATTTCTCCCAAGGGACTAGA
ACAAGTAAATCAAAACAAATGAAATTTCTTGTTTACCTTAAATTTCTTAT
TATATGTGTACATGGAATTCTTCTAATATGCCTAAAATGTTATGCTCTTT
TTATAAGCTGGTAACGAATTTAAAACATGGAGAGAAATTTATGCATTTTA
ATTATCAGGGATGCTGAAGATCATATTGCCTGGCTTCTTCAACATGGGTG
GCATGAGAAAGCTTTAGCTGCAGTTGAATCTGGACAGGGACGGAGTGAAC
TGCTTGATGAGGTATTTATGTTTATATTAAATCCATATGTTTTTATACTT
CCTTTAATGGTTATTAGAGTTAAATATGTATTGTATAGAAAAAGGCAAGT
TTGTGGCACATAAAATGAAGTTAGGTTATCCATGTATGCTTATGAAGTCA
ATCAATTATGTTGGTTGTGTGTAGTTGAAGGTTCCTCAACTATTTTGTTC
CTACAGTTGTTTTTCATCATTTATTTGCTTTTAATAACAGTGTGTATAAT
ATTTGACACAAGCTCAAAGTGAAGTGGAATGGAACCTACAATGTCATCTA
TTTGGTGATTTATGGTTTCACTATATATCACTCCGTTGTCCTTATATCTA
TTGAGAAACATAAAATTGTCCTTATATCTAGTGAAGGGTGATTACCTTTT
TCTTCTGAAGTTTCCTCCTTGAGATTTTATTATCATGGTATTGCTAATAT
TTCTTGAGTCATCATTCGTACATATTATGTATCACATATTTTTCTAAGAA
TTCTTGGTGAACTTGTCTGTTTGGACGCAACTGAGATTTATCTTTGCAGG
TGGGTTCTAGGTACCTTGACCATCTGATCGTGGAAAGAAAATATGCTGAA
GCAGCTTCTTTGTGTCCCAAGTTGCTACGAGGGTCAGCCTCTGCATGGGA
GAGGTACCAGTACCAAATACCATTAGTTGTTAATCTGTTGTACAGTTCTT
TTTGGTAATTGAGTATCAATGGGCTTCCTTCAACAGATGGGTTTTCCACT
TTGCACACCTTCGTCAACTCCCTGTTTTGGTTCCTTACATGCCTACAGAA
AACCCTAGACTGCGCGATACTGCTTATGAGGTTAGCTAACGCCTAAAACA
AAGTAGTCTTAGTTTTAAGTTGTGTTTACATAGTATCTATAATAAACTAA
GTTGGGATTTATTTGCTTTTGGTTCTACAGGTTGCTCTTGTTGCATTAGC
TACAAATGCATCTTTTCATAAGGACCTTTTGTCTACTGTTAAATCATGGC
CATCTGTAATTTATTCTGTGTTGCCTGTTATTTCTGCTATTGAACCTCAG
CTTAATACATCATCCATGACTGATCCACTCAAGGAGGTTAGTCTGACTAT
AATTATATTTGCATTTTGAAATTTGAATATCTTTACCATCTCTTGATACT
TATATTAATGTGCTGCTTTTCTATGTCAGACATTAGCAGAGTTGTATGTG
ATTGATGGGCAACACGAGAAAGCCTTCTCATTGTATGCTGATGTAGGTGG
TCTTAATTAATATTTATTGTACTCAGGAAGCAATTACATTGAGTGATTGA
CACAGATACTTTGATTTTATTCTTTTGTGTATTTGTTGTGATATACCAAT
TTACTTTTCCCCTTTTCTGAAACTTTCAGCTTCTAAAACCTGAAGTGTTT
GACTTCATTGACAGACATAACCTGCATGATGCAATTCGTGAAAAGGTATG
TGGGATTTGTTAAAAAGAGAATTTTTCTCGGTAGTACGTTTTCTCTGTAG
TTTTAGACTCGGTTAAGATCAGCTGATGTGCAAATCATGTCTCCGCTGGA
ATTTGATTCTTAAGCATTAATGCACCTGAAGAATCTTTTTACATCTTTTT
GGGTAGTATACTAGGTCGTGGCTATAAATGTTGTCATATCTTTCACATAT
TTTGTTTTCCAAATAACAGATATAATCATAGATTTATTGAATGCATAGAA
AAATGGATGAACCGGCAATATCACATTGCAAATATCTGGAACTAATTTAT
TAGAATTTGATTGTTCCTAGAATATTTGAAGAGGAGAAAAAATTGTTGAA
TTTAATCTTGAAGTTTGAGTTTTTTTTCTTCTAATTTTACTTGTTACCAT
TTATGTTAGAAAACCATAGCTTTAGGGAGAGAGGGGAAAATGATATGTGA
GGCATCCCATAATATTTTGAAAGTTACTCAAGATGGCAGTGAAATATTAG
CAGATGAATCACTAGCACAAGTACAACCACCAAGTTTTTTTCCCGTTTCT
ACATAACTACATAAGCAAATCATATCTACTTGTTAATACTTTGACAGTTT
GACCGCAAAATGACCCCCACACCTTCTATTTTGATAGCATCATAAGTTGC
TAATTACTCAAATCCAAAGCACATTCCTTGTTACTATTATATCCTTAATA
CTGCCTCTCAAGCTACTAAGCTTTCAGCTTGTTAAAAAATAAATAAAATC
AATTCTATAAAACAAAGAATGTAAAACCTGATCCCACCAACCAAAGAACT
TTACCTAACTATATACCTTTATTTATTCTAATATAATACAACCATGTGAT
ATGAACCTTGGTAGAACCACACTGCATAAGCTAGCTATCATGGTTAGAGA
ACCTAAGATATAAAGTCCACACCAGAATCCCATACTTCCAAGTTCTAATA
TTTGACTCAAGTCTCATACCTTCCAATTGGATTCTAACACCGCATATTGA
CACTACACCTTTTACATGGCATGCTTAATGAGTAATTAATTGTTTAGTGG
CCTAAGCACTTTCATTATTAATATACTCAGTCCTTAAAACTATTTATTTG
ATCACTTGAATCTCATTTGTCTAACCTGTGCTTGTTCAGGTAGTTCAACT
GATGATGTTAGATTGCAAGCGTGCAGTTCCTCTATTAATCCAAAATAGGG
ACTTAATTACTCCACCTGAAGTTGTGAAGCAACTTCTAAATGCCAATGTT
AAGTGTGATAGCCGATATTTTTTACATTTATATCTTCATTCATTGTTTGA
AGTAAATCCACATGCTGGGAAGGACTTTCATGATATGCAGGTAGAGTTTT
GTTTCTTTCATTTAACCTTTGCAAACTTCTTTGTGTGGGATTCTAGATGC
AATTCAATTTATGAAAGCTATTTGCATTATGAGTTTGGCCCAAAGTAATT
ATTGTGTTCAATTTTTTATTATAGAAATAACTTACAGACCTCGTTATGAA
CATCTATGCCTTTATAATGTTCCAAGACAATGACATAATCTGGCTGAAAA
GGAAATATAAGACCCTCGATTGACTAAATAATAATTGAGTAATGATATAT
AAAAAGTGTAGCTCACTGCATGAGGCTCCCATTCAGTAGGGTATGGGGAT
GATAGATGTATATAGTCTTATCCTCACAAGCGAAGAGCAATCGTATATCC
TCCTACAAAATCAGTATACAAATCCTCCTACGCATTATGATGGTGACATG
TGTCATTTGTAGGCCATTCATTAATAAGTACAACCTTGTGGCACTTGTCA
CCGTCATGTGTGTAGGAGGATTTGCAGGCTAATTTTGTAGGTCATATCAT
TTTTCTTAATAAATACTATCATGGTTAAGAAAGACTTATATATTCATGTC
TTGTCAATGAACATGATTTATGATAGAGCATTATGATATTATTCAATCCA
TATAGCCGACCCCATCTAGCAGGATAAAGGTTTGGTTGTTTGTTTTTCTT
TATAACAAACCTTGTATGTGATACGTGATGCGGCAAATTTGGTATGCGGT
AAGTAGGGTAAATGAGTGAACCATGTAAACAACCAAAACTCTATACTTTC
ATGCGCCGGACATGAGTAGATAACTTTTAAATACCATATAAGGTGTCTTC
TCCAATCTTGTTCTACCAGAATCCTGTATGTATACATTTATTTACAAGCA
ACTAGAATGGAGGAGGTTTTTTTCCAACACCTTCAACTTGGTCCTGTATA
GTCGAGTCCTTAGGTACATGTTTTTGGATTCTTAGGCACACTGTTTTGCT
GCTTTATGTGGACTGTGGGACCTTCCCCTGTTTTTACACAAACAGCAAAT
CCATCTGCATCTCTAGTTGTTGCATAATAGATCAGGGGTGGCTATCGTTG
TAATAGAATAATAAATCAGTTTCGGTCTAATTACAGTTCAATCTATTTTA
CCAGCAATTATTAGCTATTGCTACCAATTTGTGTTTGCAACCTGTAGAGC
CATGGCCTTGTAGTCATACGATTCTTTCTTGTGGTCCAGCCACACTGTTA
TTCATTTGTCCTTTTTATCTCTTTATTCTTCTCTCACTTTAGTGGTTTGT
ATGTGCTGCCTGCGATTAAATTCTTTTTTTCTCAGTTAATAGCATCCTTT
TGTCTACTGCGTAGGTAGAGCTCTATGCAGACTATGATCCAAAGATGCTG
CTACCTTTTCTTCGAAGCAGTCAACACTATACCCTCGAGAAGGTTTGTGA
TCAAACTTTGAAAGTTATATACATATGTTCATGTGAACTAAATTCTCAAT
TGTTTTTCAGGCTTATGAAATTTGCATTAGAAGAGACCTAATGAGAGAGC
AAGTCTTCCTCCTAGGGAGGATGGGAAACTCAAAACAAGCCCTGGCTGTT
ATTATAAACAAATTAGGGGATATAGAGGAGGTATTTTATTTAATAATTTT
CTACTATAGGTGGTTTTTGGTTTCAATCAATTTTAATGTCTTGAATCAGA
ACTTCGGGGATTTTATGTTGAATTTGAATGCTAATATTTTTACGCAGGCT
GTAGAGTTTGTCACCATGCAGCATGATGATGAACTTTGGGAAGAACTAAT
CAAGCAGTGCCTACACAAACCTGAAATGGTATATCTTGATAACTGAATTG
TATATTTAAGATATAGGCCTGTTTGATTTCCTACTTTGAGAACAGTTTTT
TGTTTTAAAGATGATATCTGTTTGGGAATTGGTCCCTATTCCATATTTTT
AAAGACTGGTAAGATATCAGCTGTTTTCGTAACCAGAATCCTGGCACATC
TTTTAGATGTTCTCTGACTCTGTTTTCTTTTTATTCTCTTTTCCAAAAAC
ATGGTGGAGATTTTCGTTGAATATCTCAATTACATTTTACACTCTCACCT
TTCCTCTGTGTTTTCCCCTTCATTTCCTGCATCTCATCAGTAGGCCTTTC
ATCTATGCTATCTTTTTTTGTTGGTATAACCAAGGGTATCCCCAGGAACT
AATCCCTTTTGGGGTATGTATCTATTCCTCCTAACAAGTATCTCTCCCAG
GATCTAGTAGGCCTTACTCCACTTGATCAACGCCTTGTTGGTACATCTAT
GCTATCTTGGTCAGTGCTATTCCATTACCGCCGACAATGTCTGAAGGCTG
AACTGCATTTCTCTGTCTCATCATATGCATCTAGTGCATGCTATTGTCCA
TATGGACTGTGACAAGCACCCTATCTTCTCTTGTAACACCATTTCTTACC
GTAGCTTTTTCTGGAATAAATGAACTAAGATTCTCTCCCGTGGGATAGCC
TGGTATCAAAAAGATCCACATAGCCTTCAGTTTGGAGGTGCTTCTAGATG
ATGAAGTGTGGCCTCATAGAGATCATTGCATTCTGCATCTACGGTGAAAC
ACTTTTTGGTCACTTGTGCCTTTCTAGATGGAATGGATGTGGGATCATTG
TACAAGTTTTTTTTGAGGAAAAAATATAAATAGTTCATGGGAACAAAGTT
TAAAATTATTATTGTGTTGTTTTTCTATAAAGAAAATTGTTTTTCTAACT
GAAAATTTTCTTCAATATGTTAAACAAAACATAGTTTCCTGTGATAGAAT
TTGGAAATCTGTTTCAGAAACCAGAACAACTGAAACAGCAACAAGGATGG
TCAATATCAATGTATTTTGTATTCCTTTCTCAAACCTTTTCTAAGGTTGG
TTCTGGTAATTGACAGGTTGGCATACTACTGGAGCACACAGTTGGAAACC
TTGATCCCCTCTACATTGTAAATAAGGTTCCAAATGGGATGGAAATACCT
CGGTAAGTAATAAAATTGTCTTAACCAAAATTTCATTATGGTTTCTAATC
TTGCAACATATAAAAGGAATAAAATTAGTGAGTTGTAGATCACATTAAGT
AGGACTAGGAGATGCCAATCTATCAGAGTATCAGGTTCTTATTATGCATA
TGCAAGTTGTTCAACGTGCTTCGAATTTTAACTGATTACTCAGATAGCTA
GATCATTCTGGCTTCCTAATTCCAGCTATATTCGATAGCGTACTGTTTTC
CAGACGGTGATTTCTTTATCTGCTTTTCTATAGGCTCAGGGATCGGTTGG
TTAAAATTATCACTGATTACAGAACTGAAACATCACTTAGACATGGGTGT
AATGATATCCTGAAGGTGCTTTTCTCCCTCTCCATTTCTCTAGTACAAGG
AATGTTTTTTTTTTAAAATATAAGATATATTGCTGATTTGTTGTCATTAA
ATATAGGCGGACTGTGTCAACCTCTTGATTAAGTATTACAAAGAGGCAAA
GCATGGAATTTACCTAACTAATGAAGAAGACGAGCCACGATCTAAAAGGA
GCAATACTCATGCTTCTCAGATATTTGACAAAACCCCAAGTCTGAGAATA
ATGGAAGCGAAGTCAAAGACAAGAGGGGGTGGAAGATGCTGTATATGTTT
TGACCCCTTTTCTATACAGAATATATCAGTCATTGTTTTCTTTTGCTGTC
ACGCTTATCATACTACTTGTCTTATGGATTCCTCCTACACTAATAGTAGC
AAGAAAGAGATAGAAACCACTTACAATGGTTTTGTGGATGATAATAGTCA
TGACGATGATGAAGAGGAAGAGGCCGGTGATCATCGTATGCGATGTATAT
TGTGTACTACTGCCGCTAGTTGA

Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:710264..720686-

>rna-TanjilR_04325_La_Tanjil_v1.0 ID=rna-TanjilR_04325_La_Tanjil_v1.0; Name=rna-TanjilR_04325; organism=Lupinus angustifolius; type=CDS; length=2844bp; location=Sequence derived from: Chr_LG03-CM007363.1:710264..720686- (Lupinus angustifolius
ATGGCTCCGTTTCCATCTGAAAACGGCGTCGATGGAGATGATGAGAGAGA
AGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGAAGAAGAAGAAGAAG
ACGATGACGAAGAGCCAAGGCTCAAATACCAGAGAATGGGAGGGAGTATA
CCTTCGCTTCTAGCGAGCGATGCAGCGTCTTGCATTGCGGTTGCGGAAAG
GATGATCGCGCTCGGTACTCACGACGGCGTCGTTTATATCCTTGATTTTC
TCGGCAATCAGGTGAAAGAATTCCATGCCCATGTTGCTGTTGTTAATGAC
CTTAGCTTTGATATAGCGGGTGAATACATTGGGAGCTGTTCTGATGATGG
ATCTGTTGTAATTAACAGCCTTTTTTCTGATGAGAAAATGAGATTTGAGT
ATCACCGCCCTATGAAGGCGATCGCTTTGGACCCAGACTATGCAAGAAAC
TCGTCTAGGAGATTTGTTGCTGGTGGTTTAGCAGGGAATTTGTATTTGAA
TTCAAAGAAATGGTTAGGCTATCGTGACCAGGTTTTGCACTCTGGAGAAG
GTCCAATACATGCTGTGAAGTGGAGAACAAGCCTCGTTGCCTGGGCAAAT
GATGCAGGAGTGAAGGTTTACGATACCGCCAATGACCAGCGTGTAACATT
TATTGAAAGGCCACGAGGTAGCCCACGGCCCGAGCTTTTGCTTCCTCACC
TGGTTTGGCAGGATGACACTCTCTTGGTTATTGGTTGGGGAACATCTGTC
AAAATTGCTTCAATAAGGACAAACCGCCATCACACAGCCAATGGGACATA
TAGGCAAGTTCCTTTGTCTGGTATGACCCAGGTGGATATTCTAGCATCAT
TCCAAACTAGCTATTTCATCTCAGGAATTGCTCCCTTTGGTGATACTTTG
GTTATTCTAGCTTATATTCCTGGAGAAGATGGAGAAAAGGATTTTAGTAG
CACCGCTCCTTCACGACAGGGCAATGCACAAAGACCAGAAGTACGAATAG
TAACACGGAACAATGATGAACTCTCGACAGATGCTCTACCCGTGCATGGC
TTTGAGCATTACAAGGCAAAGGACTATTCTCTTGCTCATTCCCCCTTCTC
AGGCAGCAGTTATGCTGGTGGTCAGTGGGCTGCAGGGGATGAACCAATTT
ACTATATCGTATCCCCGAAGGATGTAGTTATTGCAAAGCCAAGGGATGCT
GAAGATCATATTGCCTGGCTTCTTCAACATGGGTGGCATGAGAAAGCTTT
AGCTGCAGTTGAATCTGGACAGGGACGGAGTGAACTGCTTGATGAGGTGG
GTTCTAGGTACCTTGACCATCTGATCGTGGAAAGAAAATATGCTGAAGCA
GCTTCTTTGTGTCCCAAGTTGCTACGAGGGTCAGCCTCTGCATGGGAGAG
ATGGGTTTTCCACTTTGCACACCTTCGTCAACTCCCTGTTTTGGTTCCTT
ACATGCCTACAGAAAACCCTAGACTGCGCGATACTGCTTATGAGGTTGCT
CTTGTTGCATTAGCTACAAATGCATCTTTTCATAAGGACCTTTTGTCTAC
TGTTAAATCATGGCCATCTGTAATTTATTCTGTGTTGCCTGTTATTTCTG
CTATTGAACCTCAGCTTAATACATCATCCATGACTGATCCACTCAAGGAG
ACATTAGCAGAGTTGTATGTGATTGATGGGCAACACGAGAAAGCCTTCTC
ATTGTATGCTGATCTTCTAAAACCTGAAGTGTTTGACTTCATTGACAGAC
ATAACCTGCATGATGCAATTCGTGAAAAGGTAGTTCAACTGATGATGTTA
GATTGCAAGCGTGCAGTTCCTCTATTAATCCAAAATAGGGACTTAATTAC
TCCACCTGAAGTTGTGAAGCAACTTCTAAATGCCAATGTTAAGTGTGATA
GCCGATATTTTTTACATTTATATCTTCATTCATTGTTTGAAGTAAATCCA
CATGCTGGGAAGGACTTTCATGATATGCAGGTAGAGCTCTATGCAGACTA
TGATCCAAAGATGCTGCTACCTTTTCTTCGAAGCAGTCAACACTATACCC
TCGAGAAGGCTTATGAAATTTGCATTAGAAGAGACCTAATGAGAGAGCAA
GTCTTCCTCCTAGGGAGGATGGGAAACTCAAAACAAGCCCTGGCTGTTAT
TATAAACAAATTAGGGGATATAGAGGAGGCTGTAGAGTTTGTCACCATGC
AGCATGATGATGAACTTTGGGAAGAACTAATCAAGCAGTGCCTACACAAA
CCTGAAATGGTTGGCATACTACTGGAGCACACAGTTGGAAACCTTGATCC
CCTCTACATTGTAAATAAGGTTCCAAATGGGATGGAAATACCTCGGCTCA
GGGATCGGTTGGTTAAAATTATCACTGATTACAGAACTGAAACATCACTT
AGACATGGGTGTAATGATATCCTGAAGGCGGACTGTGTCAACCTCTTGAT
TAAGTATTACAAAGAGGCAAAGCATGGAATTTACCTAACTAATGAAGAAG
ACGAGCCACGATCTAAAAGGAGCAATACTCATGCTTCTCAGATATTTGAC
AAAACCCCAAGTCTGAGAATAATGGAAGCGAAGTCAAAGACAAGAGGGGG
TGGAAGATGCTGTATATGTTTTGACCCCTTTTCTATACAGAATATATCAG
TCATTGTTTTCTTTTGCTGTCACGCTTATCATACTACTTGTCTTATGGAT
TCCTCCTACACTAATAGTAGCAAGAAAGAGATAGAAACCACTTACAATGG
TTTTGTGGATGATAATAGTCATGACGATGATGAAGAGGAAGAGGCCGGTG
ATCATCGTATGCGATGTATATTGTGTACTACTGCCGCTAGTTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000547	Clathrin_H-chain/VPS_repeat
IPR001841	Znf_RING
IPR001680	WD40_rpt
IPR016902	VPS41
IPR011990	TPR-like_helical_dom_sf
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036322	WD40_repeat_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0016192	vesicle-mediated transport
GO:0006886	intracellular protein transport
GO:0046907	intracellular transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

rna-TanjilR_04325