rna-TanjilR_04333
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A2_ARATH (AP-2 complex subunit alpha-2 OS=Arabidopsis thaliana OX=3702 GN=ALPHAC-AD PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.864e-64 Identity = 140/281 (49.82%), Postives = 150/281 (53.38%), Query Frame = 1
Query: 3211 ISSSCRPLVRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERLARNQDIPPEYTYYGIPSPWLQVCKFFFSFN*SLRCFGFRKIF*CYSYSFGFIENFQISN*MLLSHLESSPALMLNNFCLM*VKTMRALQYFPTIEDPNTRRSLFEVCHIALTHQCFIYLVIEY**SSS*SFQVLQRILMGTDVVKNVNKNNASHAVLFESLALVCSSDT 4053
ISSSCRPLVRKKAALCLLRL+RKNPD VNVDGW ADRMAQLLDERDLGVLTSS SLLVALVSN+HEAY SCLPKCVKILERLARNQD+P E Y+Y +G SP L VK MRALQYFPTIEDP+TR++LFEV LQRILMGTDVVKNVNKNNASHAVLFE+L+LV D
Sbjct: 150 ISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGW-------------------------------ADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQE-----------------------------------YTY-YGI----------------PSPWLQ--------VKAMRALQYFPTIEDPSTRKALFEV---------------------------LQRILMGTDVVKNVNKNNASHAVLFEALSLVMHLDA 312 HSP 2 Score: 45.4394 bits (106), Expect = 1.864e-64 Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 3
Query: 3072 VGNIGGREFAESLAPDVQKLLVRN 3143
VGNIGGR+FAESLAPDVQKLL+ +
Sbjct: 129 VGNIGGRDFAESLAPDVQKLLISS 152 HSP 3 Score: 103.99 bits (258), Expect = 2.431e-58 Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 3
Query: 8442 QIGIKAEWRAHHGHLVLFLGNKNTSPLVSVQAIILPPTHLKMELSLVPETIPPRAQVRN 8618
QIGIKAEWR HHG LVLF+GNKNTSPL SVQA+ILPP HL+++LS VP+TIPPRAQV++
Sbjct: 758 QIGIKAEWRGHHGRLVLFMGNKNTSPLTSVQALILPPAHLRLDLSPVPDTIPPRAQVQS 816 HSP 4 Score: 74.3294 bits (181), Expect = 2.431e-58 Identity = 31/43 (72.09%), Postives = 40/43 (93.02%), Query Frame = 3
Query: 8883 VNVKLRLPAILNKFLQPIPVSAEEFFPQWRSLTGPPLKLQEVV 9011
V+ KLR+PA LNKFLQP+ +++EEFFPQWR+++GPPLKLQEVV
Sbjct: 843 VSAKLRIPATLNKFLQPLQLTSEEFFPQWRAISGPPLKLQEVV 885 HSP 5 Score: 53.5286 bits (127), Expect = 2.431e-58 Identity = 23/30 (76.67%), Postives = 28/30 (93.33%), Query Frame = 1
Query: 8689 VQCPLEVINLRPSRDVAVVDFSYKFGNDMV 8778
VQ PLEV+N+RPSRDVAV+DFSYKFG ++V
Sbjct: 814 VQSPLEVMNIRPSRDVAVLDFSYKFGTNVV 843 HSP 6 Score: 47.3654 bits (111), Expect = 2.431e-58 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 1
Query: 9109 VRGVKPLPVLEMANLFNSFHLTVSPGL 9189
VRGV+PL + EMANLFNSFH+T+ PGL
Sbjct: 885 VRGVRPLALPEMANLFNSFHVTICPGL 911 HSP 7 Score: 34.6538 bits (78), Expect = 2.431e-58 Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query: 9312 VASTTFFSESTRAMLCLVSI 9371
VASTTF+SE+T AMLCL I
Sbjct: 919 VASTTFYSETTGAMLCLARI 938 HSP 8 Score: 120.939 bits (302), Expect = 1.532e-52 Identity = 99/262 (37.79%), Postives = 125/262 (47.71%), Query Frame = 2
Query: 7109 RYESSIEVEIQQRAVEYFTLCRKGADLMDILAEMPKFPERQVTYLKFV*SLR*SIL*NACINTLLQIQSALIRKAEDTEVDTAEQSAIKLRXXXXXXXXXXXXVTDQSYGNGTPTVSHLSPVKLPSTSSKVVSPFPHIYFFL*IFLQCHFVQH*MVSSTIPFKPKMLSFNTS*FDADLVSKQDNSLADQRLYQENGTLNKEDSVPPSEDLLSDLLGPLAIEGPPSSSVHPQRSTTS--GLEDTVVDATALVPAGEQANAVQV 7888
+YES I+VEIQQRAVEYF L +KG MD+LAEMPKFPER QS+LI+KAE+ E DTA+QSAIKLR Q Q SNA+ + D NG P P+K+P +LS +T D + V++ L NGTL+ D PS DLLSDLLGPLAIE PP + + Q G+ D +D +A+VP EQ N V++
Sbjct: 558 KYESCIDVEIQQRAVEYFELSKKGPAFMDVLAEMPKFPER---------------------------QSSLIKKAENVE-DTADQSAIKLR--AQQQPSNAIVLADPQPVNGAP-----PPLKVP----------------------------------------ILSGST---DPESVARS--------LSHPNGTLSNIDPQTPSPDLLSDLLGPLAIEAPPGAVSYEQHGPVGAEGVPDE-IDGSAIVPVEEQTNTVEL 732 HSP 9 Score: 111.694 bits (278), Expect = 1.532e-52 Identity = 56/101 (55.45%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 6709 QVSAYILGEFGHLLARRPGCSPKEIFNIIHEKLPTVS*VESHFTSQFIYSRHPFRLDILQTPFIFRTSTISILLSTYAKILMHTQPPDPELQNQIWAIFKK 7011
+VSAYILGE+GHLLAR+PGCS E+F+I+HEKLPTVS T TI ILLSTYAK+LMH QPPDPELQ ++WA+FKK
Sbjct: 487 KVSAYILGEYGHLLARQPGCSASELFSILHEKLPTVS-----------------------------TPTIPILLSTYAKLLMHAQPPDPELQKKVWAVFKK 558 HSP 10 Score: 134.806 bits (338), Expect = 6.424e-30 Identity = 75/140 (53.57%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 1561 LTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQVNILPFYDTIFVMFGNCIYSFLF**SAI*VILLVYRENV*TVKVEF*HCHE*LQVGYIVTSSLLHENHDFLRLAINTVRNDIIGRNETFQCLALTMV 1980
LTPY+KKKYVWKMLYI+MLGYDVDFGHMEAVSLISAPKYPEKQV G + S L +ENHDFL+LAINTVRNDIIGRNETFQCLALT+V
Sbjct: 44 LTPYKKKKYVWKMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQV-------------GYIVTSCLL-----------------------------------------NENHDFLKLAINTVRNDIIGRNETFQCLALTLV 129 HSP 11 Score: 78.9518 bits (193), Expect = 4.469e-21 Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ
Sbjct: 431 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 465 HSP 12 Score: 47.7506 bits (112), Expect = 4.469e-21 Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKVCVLL 6338
QPYAA+KAREY+DK AIHETMVKV +
Sbjct: 465 QPYAASKAREYMDKIAIHETMVKVSAYI 492 HSP 13 Score: 88.1965 bits (217), Expect = 1.157e-15 Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 1
Query: 7 MSGMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
M+GMRGLSVFISD+RNCQNKE ERLRVDKELGNIRT FKNEKV Y
Sbjct: 1 MTGMRGLSVFISDVRNCQNKEAERLRVDKELGNIRTCFKNEKVLTPY 47 HSP 14 Score: 72.7886 bits (177), Expect = 6.073e-11 Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 2
Query: 4760 VMHLDAEKEMMSQCAALLGKFIAVREPNIRYLGL 4861
VMHLDAEKEMMSQC ALLGKFI+VREPNIRYLGL
Sbjct: 307 VMHLDAEKEMMSQCVALLGKFISVREPNIRYLGL 340 HSP 15 Score: 67.3958 bits (163), Expect = 2.738e-9 Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 2
Query: 5057 ENMTRMLMVTDVQDIIKRHQAQIITSLKDPDIRL 5158
ENMTRMLMVTDVQDIIK+HQ+QIITSLKDPDI +
Sbjct: 341 ENMTRMLMVTDVQDIIKKHQSQIITSLKDPDISI 374 HSP 16 Score: 63.929 bits (154), Expect = 3.114e-8 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 5854 VL*YLSTAEFAMREELSLKAAILAEKFAPDLSW*CNSSYQKHIRIILMLRSLIDRA 6021
+L YLSTAEF+MREELSLKAAILAEKFAPDLSW ++ +IL LID+A
Sbjct: 398 LLQYLSTAEFSMREELSLKAAILAEKFAPDLSW--------YVDVIL---QLIDKA 442 HSP 17 Score: 59.3066 bits (142), Expect = 6.891e-7 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3
Query: 5625 SIRRRALDLLYGMCDISNAKDIVEELLQ 5708
SIRRRALDLLYGMCD+SNAKDIVEELLQ
Sbjct: 373 SIRRRALDLLYGMCDVSNAKDIVEELLQ 400
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A1_ARATH (AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana OX=3702 GN=ALPHA-ADR PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 2.128e-64 Identity = 140/281 (49.82%), Postives = 150/281 (53.38%), Query Frame = 1
Query: 3211 ISSSCRPLVRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERLARNQDIPPEYTYYGIPSPWLQVCKFFFSFN*SLRCFGFRKIF*CYSYSFGFIENFQISN*MLLSHLESSPALMLNNFCLM*VKTMRALQYFPTIEDPNTRRSLFEVCHIALTHQCFIYLVIEY**SSS*SFQVLQRILMGTDVVKNVNKNNASHAVLFESLALVCSSDT 4053
ISSSCRPLVRKKAALCLLRL+RKNPD VNVDGW ADRMAQLLDERDLGVLTSS SLLVALVSN+HEAY SCLPKCVKILERLARNQD+P E Y+Y +G SP L VK MRALQYFPTIEDP+TR++LFEV LQRILMGTDVVKNVNKNNASHAVLFE+L+LV D
Sbjct: 150 ISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGW-------------------------------ADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQE-----------------------------------YTY-YGI----------------PSPWLQ--------VKAMRALQYFPTIEDPSTRKALFEV---------------------------LQRILMGTDVVKNVNKNNASHAVLFEALSLVMHLDA 312 HSP 2 Score: 45.4394 bits (106), Expect = 2.128e-64 Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 3
Query: 3072 VGNIGGREFAESLAPDVQKLLVRN 3143
VGNIGGR+FAESLAPDVQKLL+ +
Sbjct: 129 VGNIGGRDFAESLAPDVQKLLISS 152 HSP 3 Score: 104.375 bits (259), Expect = 4.739e-58 Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 3
Query: 8442 QIGIKAEWRAHHGHLVLFLGNKNTSPLVSVQAIILPPTHLKMELSLVPETIPPRAQVRN 8618
QIGIKAEWR HHG LVLF+GNKNTSPL SVQA+ILPP HL+++LS VP+TIPPRAQV++
Sbjct: 758 QIGIKAEWRGHHGRLVLFMGNKNTSPLTSVQALILPPAHLRLDLSPVPDTIPPRAQVQS 816 HSP 4 Score: 74.3294 bits (181), Expect = 4.739e-58 Identity = 31/43 (72.09%), Postives = 40/43 (93.02%), Query Frame = 3
Query: 8883 VNVKLRLPAILNKFLQPIPVSAEEFFPQWRSLTGPPLKLQEVV 9011
V+ KLR+PA LNKFLQP+ +++EEFFPQWR+++GPPLKLQEVV
Sbjct: 843 VSAKLRIPATLNKFLQPLQLTSEEFFPQWRAISGPPLKLQEVV 885 HSP 5 Score: 52.7582 bits (125), Expect = 4.739e-58 Identity = 23/30 (76.67%), Postives = 28/30 (93.33%), Query Frame = 1
Query: 8689 VQCPLEVINLRPSRDVAVVDFSYKFGNDMV 8778
VQ PLEV+N+RPSRDVAV+DFSYKFG ++V
Sbjct: 814 VQSPLEVMNIRPSRDVAVLDFSYKFGANVV 843 HSP 6 Score: 47.3654 bits (111), Expect = 4.739e-58 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 1
Query: 9109 VRGVKPLPVLEMANLFNSFHLTVSPGL 9189
VRGV+PL + EMANLFNSFH+T+ PGL
Sbjct: 885 VRGVRPLALPEMANLFNSFHVTICPGL 911 HSP 7 Score: 33.8834 bits (76), Expect = 4.739e-58 Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query: 9312 VASTTFFSESTRAMLCLVSI 9371
VASTTF+SEST A+LCL I
Sbjct: 919 VASTTFYSESTGAILCLARI 938 HSP 8 Score: 124.405 bits (311), Expect = 2.116e-53 Identity = 101/262 (38.55%), Postives = 126/262 (48.09%), Query Frame = 2
Query: 7109 RYESSIEVEIQQRAVEYFTLCRKGADLMDILAEMPKFPERQVTYLKFV*SLR*SIL*NACINTLLQIQSALIRKAEDTEVDTAEQSAIKLRXXXXXXXXXXXXVTDQSYGNGTPTVSHLSPVKLPSTSSKVVSPFPHIYFFL*IFLQCHFVQH*MVSSTIPFKPKMLSFNTS*FDADLVSKQDNSLADQRLYQENGTLNKEDSVPPSEDLLSDLLGPLAIEGPPSSSVHPQRSTTS--GLEDTVVDATALVPAGEQANAVQV 7888
+YES I+VEIQQRAVEYF L +KG MD+LAEMPKFPER QS+LI+KAE+ E DTA+QSAIKLR Q Q SNA+ + DQ NG P P+K+P +LS +T D + V++ L NGTL+ D PS DLLSDLLGPLAIE PP + + Q G+ D VD +A+VP EQ N V++
Sbjct: 558 KYESCIDVEIQQRAVEYFELSKKGPAFMDVLAEMPKFPER---------------------------QSSLIKKAENVE-DTADQSAIKLR--AQQQPSNAMVLADQQPVNGAP-----PPLKVP----------------------------------------ILSGST---DPESVARS--------LSHPNGTLSNIDPQTPSPDLLSDLLGPLAIEAPPGAVSNEQHGPVGAEGVPDE-VDGSAIVPVEEQTNTVEL 732 HSP 9 Score: 110.923 bits (276), Expect = 2.116e-53 Identity = 55/101 (54.46%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 6709 QVSAYILGEFGHLLARRPGCSPKEIFNIIHEKLPTVS*VESHFTSQFIYSRHPFRLDILQTPFIFRTSTISILLSTYAKILMHTQPPDPELQNQIWAIFKK 7011
+VSAYILGE+GHLLAR+PGCS E+F+I+HEKLPT+S T TI ILLSTYAK+LMH QPPDPELQ ++WA+FKK
Sbjct: 487 KVSAYILGEYGHLLARQPGCSASELFSILHEKLPTIS-----------------------------TPTIPILLSTYAKLLMHAQPPDPELQKKVWAVFKK 558 HSP 10 Score: 134.806 bits (338), Expect = 7.476e-30 Identity = 75/140 (53.57%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 1561 LTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQVNILPFYDTIFVMFGNCIYSFLF**SAI*VILLVYRENV*TVKVEF*HCHE*LQVGYIVTSSLLHENHDFLRLAINTVRNDIIGRNETFQCLALTMV 1980
LTPY+KKKYVWKMLYI+MLGYDVDFGHMEAVSLISAPKYPEKQV G + S L +ENHDFL+LAINTVRNDIIGRNETFQCLALT+V
Sbjct: 44 LTPYKKKKYVWKMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQV-------------GYIVTSCLL-----------------------------------------NENHDFLKLAINTVRNDIIGRNETFQCLALTLV 129 HSP 11 Score: 79.337 bits (194), Expect = 2.620e-21 Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ
Sbjct: 431 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 465 HSP 12 Score: 48.521 bits (114), Expect = 2.620e-21 Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKVCVLL 6338
QPYAA+KAREYLDK AIHETMVKV +
Sbjct: 465 QPYAASKAREYLDKIAIHETMVKVSAYI 492 HSP 13 Score: 88.1965 bits (217), Expect = 1.157e-15 Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 1
Query: 7 MSGMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
M+GMRGLSVFISD+RNCQNKE ERLRVDKELGNIRT FKNEKV Y
Sbjct: 1 MTGMRGLSVFISDVRNCQNKEAERLRVDKELGNIRTCFKNEKVLTPY 47 HSP 14 Score: 72.7886 bits (177), Expect = 5.969e-11 Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 2
Query: 4760 VMHLDAEKEMMSQCAALLGKFIAVREPNIRYLGL 4861
VMHLDAEKEMMSQC ALLGKFI+VREPNIRYLGL
Sbjct: 307 VMHLDAEKEMMSQCVALLGKFISVREPNIRYLGL 340 HSP 15 Score: 67.3958 bits (163), Expect = 2.714e-9 Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 2
Query: 5057 ENMTRMLMVTDVQDIIKRHQAQIITSLKDPDIRL 5158
ENMTRMLMVTDVQDIIK+HQ+QIITSLKDPDI +
Sbjct: 341 ENMTRMLMVTDVQDIIKKHQSQIITSLKDPDISI 374 HSP 16 Score: 63.929 bits (154), Expect = 3.035e-8 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 5854 VL*YLSTAEFAMREELSLKAAILAEKFAPDLSW*CNSSYQKHIRIILMLRSLIDRA 6021
+L YLSTAEF+MREELSLKAAILAEKFAPDLSW ++ +IL LID+A
Sbjct: 398 LLQYLSTAEFSMREELSLKAAILAEKFAPDLSW--------YVDVIL---QLIDKA 442 HSP 17 Score: 59.3066 bits (142), Expect = 7.126e-7 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3
Query: 5625 SIRRRALDLLYGMCDISNAKDIVEELLQ 5708
SIRRRALDLLYGMCD+SNAKDIVEELLQ
Sbjct: 373 SIRRRALDLLYGMCDVSNAKDIVEELLQ 400
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A2_DICDI (AP-2 complex subunit alpha-2 OS=Dictyostelium discoideum OX=44689 GN=ap2a1-1 PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 8.767e-17 Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQV 6178
YVDVILQLI AGDFVSDDIWFRVV+ VTN+ED+Q
Sbjct: 445 YVDVILQLITTAGDFVSDDIWFRVVKIVTNHEDIQA 480 HSP 2 Score: 46.2098 bits (108), Expect = 8.767e-17 Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 1
Query: 5692 LKNYCRYGNRSRLIYVIWKSYCMPFLLPLLDN*ITLERKRTS--YYM*TKND*S---ATVL*YLSTAEFAMREELSLKAAILAEKFAPDLSW 5952
L+ + + S ++ K Y LL L D+ I++ R+ Y M KN A +L YL TA++A+REEL +K A LAEKFA + SW
Sbjct: 353 LEAMSHFASLSNETSIMIKKYQDTVLLSLKDSDISIRRRALDLLYGMCDKNTCKHIVAELLSYLQTADYAIREELVIKIANLAEKFASNYSW 444 HSP 3 Score: 22.3274 bits (46), Expect = 8.767e-17 Identity = 10/24 (41.67%), Postives = 13/24 (54.17%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKV 6326
Q YAA+ L HET++KV
Sbjct: 479 QAYAASTVFNALQSRNCHETLIKV 502 HSP 4 Score: 79.337 bits (194), Expect = 6.317e-13 Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 3211 ISSSCRPLVRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERLARNQDIPPEYTYYGIPSPWLQV 3612
I+++ P+V+K+ AL +LR+ RK+ +V D W +R+ +LDE D GVLTS MSLL+ L S + + +PK + +L+++ N++ P EY YY + PWLQV
Sbjct: 161 IANTSSPMVKKRCALAILRMNRKHIGLVTPDSW-------------------------------VERLVSVLDEPDFGVLTSLMSLLIELASENPIGWEPAIPKVIHLLKKIIINKEFPKEYVYYHVTCPWLQV 263 HSP 5 Score: 68.1662 bits (165), Expect = 1.748e-9 Identity = 42/138 (30.43%), Postives = 66/138 (47.83%), Query Frame = 1
Query: 1570 YEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQVNILPFYDTIFVMFGNCIYSFLF**SAI*VILLVYRENV*TVKVEF*HCHE*LQVGYIVTSSLLHENHDFLRLAINTVRNDIIGRNETFQCLALTMVW 1983
Y+++KYV K++Y+YMLGY++DFGHMEAV+L+S+ K+ EKQ+ ++ G ILL +E H+ L L IN+ + D++ R++ FQ LAL +
Sbjct: 58 YQRRKYVCKLVYMYMLGYELDFGHMEAVTLLSSTKFSEKQIG--------YIALG---------------ILL-------------------------------NEQHEMLPLIINSFKEDLLARSDYFQSLALAAIC 141
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A1_MOUSE (AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 3.576e-14 Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVD IL LI AGD+VS+++W+RV+Q VTN +D+Q
Sbjct: 442 YVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQ 476 HSP 2 Score: 44.669 bits (104), Expect = 3.576e-14 Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 1
Query: 5863 YLSTAEFAMREELSLKAAILAEKFAPDLSW 5952
YL TA++A+REE+ LK AILAEK+A D SW
Sbjct: 412 YLETADYAIREEIVLKVAILAEKYAVDYSW 441 HSP 3 Score: 27.7202 bits (60), Expect = 3.576e-14 Identity = 14/24 (58.33%), Postives = 14/24 (58.33%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKV 6326
Q YAA E L PA HE MVKV
Sbjct: 476 QGYAAKTVFEALQAPACHENMVKV 499 HSP 4 Score: 77.411 bits (189), Expect = 2.367e-12 Identity = 47/141 (33.33%), Postives = 66/141 (46.81%), Query Frame = 1
Query: 1558 ALTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQVNILPFYDTIFVMFGNCIYSFLF**SAI*VILLVYRENV*TVKVEF*HCHE*LQVGYIVTSSLLHENHDFLRLAINTVRNDIIGRNETFQCLALTMV 1980
AL Y KKKYV K+L+I++LG+D+DFGHMEAV+L+S+ KY EKQ+ +LF + +V S N + +RL N ++ND+ RN TF CLAL +
Sbjct: 49 ALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQI------------------GYLF-------------------------------ISVLVNS-----NSELIRLINNAIKNDLASRNPTFMCLALHCI 135 HSP 5 Score: 64.3142 bits (155), Expect = 2.102e-8 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 13 GMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
GMRGL+VFISDIRNC++KE E R++KEL NIR++FK +K Y
Sbjct: 9 GMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGY 53 HSP 6 Score: 62.003 bits (149), Expect = 1.248e-7 Identity = 36/127 (28.35%), Postives = 62/127 (48.82%), Query Frame = 1
Query: 3235 VRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERLARNQDIP-PEYTYYGIPSPWLQV 3612
V++ AALCLLRLY+ +PD+V + W R+ LL+++ +GV+T+++SL+ L + + + +C+ V L R+ + +YTYY +P+PWL V
Sbjct: 164 VKQSAALCLLRLYKASPDLVPMGEW-------------------------------TARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCISLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSV 259
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A1_HUMAN (AP-2 complex subunit alpha-1 OS=Homo sapiens OX=9606 GN=AP2A1 PE=1 SV=3) HSP 1 Score: 50.447 bits (119), Expect = 4.066e-14 Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVD IL LI AGD+VS+++W+RV+Q VTN +D+Q
Sbjct: 442 YVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQ 476 HSP 2 Score: 44.669 bits (104), Expect = 4.066e-14 Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 1
Query: 5863 YLSTAEFAMREELSLKAAILAEKFAPDLSW 5952
YL TA++A+REE+ LK AILAEK+A D SW
Sbjct: 412 YLETADYAIREEIVLKVAILAEKYAVDYSW 441 HSP 3 Score: 27.7202 bits (60), Expect = 4.066e-14 Identity = 14/24 (58.33%), Postives = 14/24 (58.33%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKV 6326
Q YAA E L PA HE MVKV
Sbjct: 476 QGYAAKTVFEALQAPACHENMVKV 499 HSP 4 Score: 77.411 bits (189), Expect = 2.554e-12 Identity = 47/141 (33.33%), Postives = 66/141 (46.81%), Query Frame = 1
Query: 1558 ALTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQVNILPFYDTIFVMFGNCIYSFLF**SAI*VILLVYRENV*TVKVEF*HCHE*LQVGYIVTSSLLHENHDFLRLAINTVRNDIIGRNETFQCLALTMV 1980
AL Y KKKYV K+L+I++LG+D+DFGHMEAV+L+S+ KY EKQ+ +LF + +V S N + +RL N ++ND+ RN TF CLAL +
Sbjct: 49 ALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQI------------------GYLF-------------------------------ISVLVNS-----NSELIRLINNAIKNDLASRNPTFMCLALHCI 135 HSP 5 Score: 64.3142 bits (155), Expect = 2.102e-8 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 13 GMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
GMRGL+VFISDIRNC++KE E R++KEL NIR++FK +K Y
Sbjct: 9 GMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGY 53 HSP 6 Score: 61.2326 bits (147), Expect = 1.780e-7 Identity = 36/127 (28.35%), Postives = 62/127 (48.82%), Query Frame = 1
Query: 3235 VRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERLARNQDIP-PEYTYYGIPSPWLQV 3612
V++ AALCLLRLY+ +PD+V + W R+ LL+++ +GV+T+++SL+ L + + + +C+ V L R+ + +YTYY +P+PWL V
Sbjct: 164 VKQSAALCLLRLYKASPDLVPMGEW-------------------------------TARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSV 259
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A_ANOGA (AP-2 complex subunit alpha OS=Anopheles gambiae OX=7165 GN=alpha-Adaptin PE=3 SV=4) HSP 1 Score: 50.447 bits (119), Expect = 6.648e-14 Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVDVIL LI AGD+VS+++W+RV+Q V N E++Q
Sbjct: 442 YVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQ 476 HSP 2 Score: 43.5134 bits (101), Expect = 6.648e-14 Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 1
Query: 5863 YLSTAEFAMREELSLKAAILAEKFAPDLSW 5952
YL TA++++REE+ LK AILAEK+A D +W
Sbjct: 412 YLETADYSIREEMVLKVAILAEKYATDYTW 441 HSP 3 Score: 28.1054 bits (61), Expect = 6.648e-14 Identity = 14/24 (58.33%), Postives = 14/24 (58.33%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKV 6326
Q YAA E L PA HE MVKV
Sbjct: 476 QGYAAKTVFEALQAPACHENMVKV 499 HSP 4 Score: 65.0846 bits (157), Expect = 1.021e-10 Identity = 42/136 (30.88%), Postives = 65/136 (47.79%), Query Frame = 1
Query: 3211 ISSSCRPLVRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERL--ARNQDIPPEYTYYGIPSPWLQV 3612
+S +V++ AALCLLRL+R PD++ W R+ LL+++ +GV+T++ SL+ ALV + E Y C+ V L R+ A D+ +YTYY +P+PWL V
Sbjct: 155 VSGDTMDVVKQSAALCLLRLFRTCPDIIPGGEW-------------------------------TSRIIHLLNDQHMGVVTAATSLIDALVKKNPEEYKGCVSLAVSRLSRIVTASYTDL-QDYTYYFVPAPWLSV 258 HSP 5 Score: 26.5646 bits (57), Expect = 1.021e-10 Identity = 12/34 (35.29%), Postives = 21/34 (61.76%), Query Frame = 3
Query: 3036 RHSHHVTPSFL*VGNIGGREFAESLAPDVQKLLV 3137
R+ HV + + NIG ++ AE+ + ++ KLLV
Sbjct: 122 RNPIHVNLALQCIANIGSQDMAEAFSNEIPKLLV 155 HSP 6 Score: 68.5514 bits (166), Expect = 1.167e-9 Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = 1
Query: 1558 ALTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQV 1692
L Y+KKKYV K+L+I++LG+D+DFGHMEAV+L+S+ KY EKQ+
Sbjct: 48 TLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYSEKQI 92 HSP 7 Score: 63.5438 bits (153), Expect = 4.236e-8 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 13 GMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
GMRGL+VFISDIRNC++KE E R++KEL NIR++FK +K Y
Sbjct: 8 GMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKTLDGY 52
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A_DROPS (AP-2 complex subunit alpha OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=alpha-Adaptin PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 6.808e-14 Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVDVIL LI AGD+VS+++W+RV+Q V N E++Q
Sbjct: 442 YVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQ 476 HSP 2 Score: 43.5134 bits (101), Expect = 6.808e-14 Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 1
Query: 5863 YLSTAEFAMREELSLKAAILAEKFAPDLSW 5952
YL TA++++REE+ LK AILAEK+A D +W
Sbjct: 412 YLETADYSIREEMVLKVAILAEKYATDYTW 441 HSP 3 Score: 28.1054 bits (61), Expect = 6.808e-14 Identity = 14/24 (58.33%), Postives = 14/24 (58.33%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKV 6326
Q YAA E L PA HE MVKV
Sbjct: 476 QGYAAKTVFEALQAPACHENMVKV 499 HSP 4 Score: 63.929 bits (154), Expect = 3.485e-11 Identity = 41/136 (30.15%), Postives = 66/136 (48.53%), Query Frame = 1
Query: 3211 ISSSCRPLVRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERL--ARNQDIPPEYTYYGIPSPWLQV 3612
+S +V++ AALCLLRL+R +PD++ W R+ LL+++ +GV+T++ SL+ ALV + + Y C+ V L R+ A D+ +YTYY +P+PWL V
Sbjct: 155 VSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEW-------------------------------TSRIIHLLNDQHMGVVTAATSLIDALVKCNPDEYKGCVNLAVSRLSRIVTASYTDL-QDYTYYFVPAPWLSV 258 HSP 5 Score: 29.6462 bits (65), Expect = 3.485e-11 Identity = 14/34 (41.18%), Postives = 21/34 (61.76%), Query Frame = 3
Query: 3036 RHSHHVTPSFL*VGNIGGREFAESLAPDVQKLLV 3137
R+ HV + + NIG R+ AES + ++ KLLV
Sbjct: 122 RNPVHVNLALQCIANIGSRDMAESFSNEIPKLLV 155 HSP 6 Score: 68.5514 bits (166), Expect = 1.048e-9 Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = 1
Query: 1558 ALTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQV 1692
L Y+KKKYV K+L+I++LG+D+DFGHMEAV+L+S+ KY EKQ+
Sbjct: 48 TLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYSEKQI 92 HSP 7 Score: 62.7734 bits (151), Expect = 6.870e-8 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 13 GMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
GMRGL+VFISDIRNC++KE E R++KEL NIR++FK +K Y
Sbjct: 8 GMRGLAVFISDIRNCKSKEAEVKRINKELANIRSKFKGDKTLDGY 52
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A_DROME (AP-2 complex subunit alpha OS=Drosophila melanogaster OX=7227 GN=AP-2alpha PE=1 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 7.087e-14 Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVDVIL LI AGD+VS+++W+RV+Q V N E++Q
Sbjct: 442 YVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQ 476 HSP 2 Score: 43.5134 bits (101), Expect = 7.087e-14 Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 1
Query: 5863 YLSTAEFAMREELSLKAAILAEKFAPDLSW 5952
YL TA++++REE+ LK AILAEK+A D +W
Sbjct: 412 YLETADYSIREEMVLKVAILAEKYATDYTW 441 HSP 3 Score: 28.1054 bits (61), Expect = 7.087e-14 Identity = 14/24 (58.33%), Postives = 14/24 (58.33%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKV 6326
Q YAA E L PA HE MVKV
Sbjct: 476 QGYAAKTVFEALQAPACHENMVKV 499 HSP 4 Score: 65.0846 bits (157), Expect = 1.634e-11 Identity = 41/136 (30.15%), Postives = 66/136 (48.53%), Query Frame = 1
Query: 3211 ISSSCRPLVRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERL--ARNQDIPPEYTYYGIPSPWLQV 3612
+S +V++ AALCLLRL+R +PD++ W R+ LL+++ +GV+T++ SL+ ALV + + Y C+ V L R+ A D+ +YTYY +P+PWL V
Sbjct: 155 VSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEW-------------------------------TSRIIHLLNDQHMGVVTAATSLIDALVKRNPDEYKGCVNLAVSRLSRIVTASYTDL-QDYTYYFVPAPWLSV 258 HSP 5 Score: 29.6462 bits (65), Expect = 1.634e-11 Identity = 14/34 (41.18%), Postives = 21/34 (61.76%), Query Frame = 3
Query: 3036 RHSHHVTPSFL*VGNIGGREFAESLAPDVQKLLV 3137
R+ HV + + NIG R+ AES + ++ KLLV
Sbjct: 122 RNPVHVNLALQCIANIGSRDMAESFSNEIPKLLV 155 HSP 6 Score: 68.5514 bits (166), Expect = 1.022e-9 Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = 1
Query: 1558 ALTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQV 1692
L Y+KKKYV K+L+I++LG+D+DFGHMEAV+L+S+ KY EKQ+
Sbjct: 48 TLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYSEKQI 92 HSP 7 Score: 62.7734 bits (151), Expect = 7.292e-8 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 13 GMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
GMRGL+VFISDIRNC++KE E R++KEL NIR++FK +K Y
Sbjct: 8 GMRGLAVFISDIRNCKSKEAEVKRINKELANIRSKFKGDKTLDGY 52
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A2_RAT (AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3) HSP 1 Score: 48.521 bits (114), Expect = 5.933e-13 Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVD IL LI AGD+VS+++W+RV+Q V N +D+Q
Sbjct: 441 YVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQ 475 HSP 2 Score: 43.5134 bits (101), Expect = 5.933e-13 Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 1
Query: 5848 ATVL*YLSTAEFAMREELSLKAAILAEKFAPDLSW 5952
A +L YL TA++++REE+ LK AILAEK+A D +W
Sbjct: 406 AEMLSYLETADYSIREEIVLKVAILAEKYAVDYTW 440 HSP 3 Score: 26.5646 bits (57), Expect = 5.933e-13 Identity = 13/24 (54.17%), Postives = 14/24 (58.33%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKV 6326
Q YAA E L PA HE +VKV
Sbjct: 475 QGYAAKTVFEALQAPACHENLVKV 498 HSP 4 Score: 71.633 bits (174), Expect = 1.244e-10 Identity = 45/141 (31.91%), Postives = 65/141 (46.10%), Query Frame = 1
Query: 1558 ALTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQVNILPFYDTIFVMFGNCIYSFLF**SAI*VILLVYRENV*TVKVEF*HCHE*LQVGYIVTSSLLHENHDFLRLAINTVRNDIIGRNETFQCLALTMV 1980
AL Y KKKYV K+L+I++LG+D+DFGHMEAV+L+S+ +Y EKQ+ +LF + +V S N + +RL N ++ND+ RN TF LAL +
Sbjct: 49 ALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQI------------------GYLF-------------------------------ISVLVNS-----NSELIRLINNAIKNDLASRNPTFMGLALHCI 135 HSP 5 Score: 63.929 bits (154), Expect = 3.183e-8 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 13 GMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
GMRGL+VFISDIRNC++KE E R++KEL NIR++FK +K Y
Sbjct: 9 GMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGY 53 HSP 6 Score: 63.1586 bits (152), Expect = 5.467e-8 Identity = 38/127 (29.92%), Postives = 60/127 (47.24%), Query Frame = 1
Query: 3235 VRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERLARNQDIP-PEYTYYGIPSPWLQV 3612
V++ AALCLLRLYR +PD+V + W R+ LL+++ LGV+T++ SL+ L + E + + + V L R+ + +YTYY +P+PWL V
Sbjct: 164 VKQSAALCLLRLYRTSPDLVPMGDW-------------------------------TSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSV 259
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Match: AP2A2_MOUSE (AP-2 complex subunit alpha-2 OS=Mus musculus OX=10090 GN=Ap2a2 PE=1 SV=2) HSP 1 Score: 48.521 bits (114), Expect = 6.078e-13 Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 2
Query: 6071 YVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQ 6175
YVD IL LI AGD+VS+++W+RV+Q V N +D+Q
Sbjct: 441 YVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQ 475 HSP 2 Score: 43.5134 bits (101), Expect = 6.078e-13 Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 1
Query: 5848 ATVL*YLSTAEFAMREELSLKAAILAEKFAPDLSW 5952
A +L YL TA++++REE+ LK AILAEK+A D +W
Sbjct: 406 AEMLSYLETADYSIREEIVLKVAILAEKYAVDYTW 440 HSP 3 Score: 26.5646 bits (57), Expect = 6.078e-13 Identity = 13/24 (54.17%), Postives = 14/24 (58.33%), Query Frame = 3
Query: 6255 QPYAAAKAREYLDKPAIHETMVKV 6326
Q YAA E L PA HE +VKV
Sbjct: 475 QGYAAKTVFEALQAPACHENLVKV 498 HSP 4 Score: 71.633 bits (174), Expect = 1.255e-10 Identity = 45/141 (31.91%), Postives = 65/141 (46.10%), Query Frame = 1
Query: 1558 ALTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQVNILPFYDTIFVMFGNCIYSFLF**SAI*VILLVYRENV*TVKVEF*HCHE*LQVGYIVTSSLLHENHDFLRLAINTVRNDIIGRNETFQCLALTMV 1980
AL Y KKKYV K+L+I++LG+D+DFGHMEAV+L+S+ +Y EKQ+ +LF + +V S N + +RL N ++ND+ RN TF LAL +
Sbjct: 49 ALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQI------------------GYLF-------------------------------ISVLVNS-----NSELIRLINNAIKNDLASRNPTFMGLALHCI 135 HSP 5 Score: 63.929 bits (154), Expect = 3.104e-8 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 13 GMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKVRVSY 147
GMRGL+VFISDIRNC++KE E R++KEL NIR++FK +K Y
Sbjct: 9 GMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGY 53 HSP 6 Score: 63.1586 bits (152), Expect = 5.421e-8 Identity = 38/127 (29.92%), Postives = 60/127 (47.24%), Query Frame = 1
Query: 3235 VRKKAALCLLRLYRKNPDVVNVDGW*IRI*LCW*YTWXXXXXXKCILSVPFTLFLRADRMAQLLDERDLGVLTSSMSLLVALVSNHHEAYWSCLPKCVKILERLARNQDIP-PEYTYYGIPSPWLQV 3612
V++ AALCLLRLYR +PD+V + W R+ LL+++ LGV+T++ SL+ L + E + + + V L R+ + +YTYY +P+PWL V
Sbjct: 164 VKQSAALCLLRLYRTSPDLVPMGDW-------------------------------TSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSV 259 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_04333 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_04333_La_Tanjil_v1.0 ID=rna-TanjilR_04333_La_Tanjil_v1.0; Name=rna-TanjilR_04333; organism=Lupinus angustifolius; type=mRNA; length=10417bpback to top protein sequence of rna-TanjilR_04333_La_Tanjil_v1.0 >rna-TanjilR_04333_La_Tanjil_v1.0 ID=rna-TanjilR_04333_La_Tanjil_v1.0; Name=rna-TanjilR_04333_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=1002bpback to top mRNA from alignment at Chr_LG03-CM007363.1:774039..784455+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_04333_La_Tanjil_v1.0 ID=rna-TanjilR_04333_La_Tanjil_v1.0; Name=rna-TanjilR_04333; organism=Lupinus angustifolius; type=mRNA; length=10417bp; location=Sequence derived from: Chr_LG03-CM007363.1:774039..784455+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:774039..784455+ >rna-TanjilR_04333_La_Tanjil_v1.0 ID=rna-TanjilR_04333_La_Tanjil_v1.0; Name=rna-TanjilR_04333; organism=Lupinus angustifolius; type=CDS; length=3009bp; location=Sequence derived from: Chr_LG03-CM007363.1:774039..784455+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|