rna-TanjilR_30768

Transcript Overview
Namerna-TanjilR_30768
Unique Namerna-TanjilR_30768_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length2060
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG07-CM007367.1supercontigChr_LG07-CM007367.1:13646558..13648617 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL176Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL495Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL496Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR610Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1232Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1237Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1238Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1311Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1337Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1042Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1049Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1051Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1055Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1056Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1057Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1236Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1279Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpvR1196Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1235Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1239Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1241Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1242Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1030Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1062Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1063Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1064Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1067Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1170Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR1172Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1015Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1016Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1020Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1060Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR1061Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR1065Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1056Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR1057Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR1058Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1037Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1038Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1040Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1044Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1014Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1017Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1019Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1020Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1182Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1199Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1200Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1201Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0955Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0960Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0965Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0968Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1142Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1143Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1144Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1148Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1151Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1153Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1009Cicer arietinum
ancarR1015Cicer arietinum
ancarR1020Cicer arietinum
ancarR1022Cicer arietinum
ancarR1023Cicer arietinum
ancarR1024Cicer arietinum
anccaR1018Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1019Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1020Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1024Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1028Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1149Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1153Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1154Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1176Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1077Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1078Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1164Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1178Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1196Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1200Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1201Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1202Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1204Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1211Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1215Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1216Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anpvfR1233Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR1023Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1024Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1025Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1028Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1269Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1272Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1273Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1275Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1276Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1277Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g060360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.007G272400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_004493708.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigst.08G104400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.001G159500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.04G195400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_012714985.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cc_v2.0_02553.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun07g009500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun07g178900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
PvulFLAVERTChr07.825Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va03G070190.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
PvulFLAVERTChr07.1001704Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_12215Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg1845.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.3g049920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun01g141500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.04G307800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
PvulFLAVERTChr07.1001245Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va02G002320.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014655642.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.007G128800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.08G246900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_08G02672.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr01.1038Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_07582.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_04G02205.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.007G194800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va02G057150.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr07.1670Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g009500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cr_20593.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_08584.1Cicer arietinum ICC 4958 genome v2Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_01734Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_03923Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_30768gene-TanjilG_30768_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_30768rna-TanjilR_30768_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_30768_La_Tanjil_v1.0rna-TanjilR_30768_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13648550..13648617rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13648550..13648617Lupinus angustifoliusCDS
rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13647246..13647360rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13647246..13647360Lupinus angustifoliusCDS
rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646984..13647073rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646984..13647073Lupinus angustifoliusCDS
rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646750..13646848rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646750..13646848Lupinus angustifoliusCDS
rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646558..13646659rna-TanjilR_30768_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646558..13646659Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13648550..13648617rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13648550..13648617Lupinus angustifoliusexon
rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13647246..13647360rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13647246..13647360Lupinus angustifoliusexon
rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646984..13647073rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646984..13647073Lupinus angustifoliusexon
rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646750..13646848rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646750..13646848Lupinus angustifoliusexon
rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646558..13646659rna-TanjilR_30768_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:13646558..13646659Lupinus angustifoliusexon


Homology
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_30768 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008637HR-like lesion-inducerPFAMPF05514HR_lesioncoord: 1..138
e-value: 3.5E-52
score: 176.3

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_30768_La_Tanjil_v1.0 ID=rna-TanjilR_30768_La_Tanjil_v1.0; Name=rna-TanjilR_30768; organism=Lupinus angustifolius; type=mRNA; length=2060bp
ATGGGGTTCTTCTCCTTCCTGGGGCGTGTCCTCTTTGCTTCTCTCTTCAT
CTTATCCGCATGGCAGATGTAAGTCCCTTCTCAGATCTATCACTTCTTTT
GTTTTTTGTTTTATGTGTACCATTAATATTCATATAAAGGACATTACTTT
CCACTTTCTTTTCATTTTTGAGATGTGGGTTTTCATTTTCCTGCTTTGGT
TTCAACTATTGAATGTTAAAATTTGATTTTTTAGATTTGTCTTGTTAGTT
GGAGATACACACATAGATTGTTTAGTTCGAGGTTGTTTGATTCCGTTATG
GCTTATTGGGTTTCTTATGTTTAGTGATTATTTTTTGAAATTATTGAACC
GTTAGATAATTAATTGTATTTTGCTTTCAAGTATAATGCATCTGTTAATG
AAGAGTCATATCTCTTGTGTGTAGATAAAATGTACATGATATCAATTTAA
ACTATCAATTATTAATCATCTCAAGATCCTGAAATGTTGAGATTGTGAAG
TGGTGCATGACTATTAGCAACAACTAATGCAGTTGAAATCTTATGTTGCA
AATGAAATAGGGTTTTTATGTTGTCTTTCGATTAAGTTAGCTCCTCGAGA
TCATTTAAGGATTTTGATGTTTGCACTTAATACTAAGACTTTGATATCAA
ATTAGGAACAGACTTCAAGATGATAGATCTTGTTGTCGAGGCAACTACAT
ATGTCGTGAACATTTAGTTTATGTTATATATAAATCAAGTAATGAAAACA
AGGTGAATTCCTTTTACTATGAACCAGGACTAAAATGAACATTCAATTAC
GATCGCCATTGTTTCCTTTACAAACTGATAGCCTGTTAATCGTTAAGCCA
CAAATATGAGATTCTCCTGCTCCAAATATTGACATCGGCAAATTCTAAAA
CCATCTTTGAATCTCTGATCCAATTCCTGTGTTCCCAGTACCAAAATCTA
ATATTGAATTGTTAGTTCGAATGACAGTTAGGCAGCCTTTTCTGCAGTCA
AATCTGGTGTTATTTCGATTTGTAACTTTCCTAGAGATAGATGTGCATAA
TCAATTTATGATTTATTAAAGTGTGTGACCTGTTTACCACATTCCTTGGT
TGAATTCTTTTGATTAGGAAATCAAATTTAATGTACCTTAAGTGATTTAA
GTTTGCTAATGTACCACTTTGTGCTTTCATACATAGCTGTAACAGTGATA
TAATACTATTAAAGCAATATTTAGTACATTTTCATTGATATAGCATTTAT
GTGCTAGGTTTAATGAATTTGATGCCAATGGTGGACCCATTGCAAAGGAG
TTGACTCCCAAGTTCACTGCTGTGAAGATAAACTTGTCCTCCAAATTGGG
GATAGGACTACCAGATTTTGATGTAAGACCAACTTTTCTTTCACTGTTAA
GAAAGTCTGAGATTAATGCTTTGTCAATGAATATGATTTATGATAGAGCA
TTATGACATCGTTTGATTTATGTAGTTGATTCCACCTAGTGGGATAAAGG
CTTGGTTGTTGTTGTTCCCTTTCTGATTGAGATGTTAAATACAGGTTCGA
CAATTTATTGCCACTATCATAATTCTAAAAGGGGCTGGAGGGCTTCTATT
CGTGTTTGGCAGCACACTTGGAGCTTTTCTACTGGTAAGGGCTTCATCTC
CTCCTAGGTTTGGAATGCGAAGAAAATGCTATTCTTTATCTTAAGTTTAA
TTTAAGTTCTAACCATTGTTGTTTTTCCAATAAAAAAGAGCCCTGATTGT
AAGTTTTCTCTTTTTGTAGCTTGTGCTTCTTGCAATGACTACTCCGCTTC
TGTACGATTTTTATAACTATAAACCCAGCAAGCCTGAGTATACTCTACTG
CTGAATGATTTCTTGCAGGTTTGTCCAAATTTCTTTCACTTTCTGTGTGT
TTGGCTAATGATTTCATCTTTGTGAGAACTTAATATATTGTGTTTACTTT
GATGGCAGAGCATAGCACTTTTTGGTGCATTGTTATTCTTTATAGGGATG
AAGACCTCAATTTCTAGGAGACAAATCAGAAAGAAGACCCCCAAAGCAAA
GACAGTTTAG
back to top

protein sequence of rna-TanjilR_30768_La_Tanjil_v1.0

>rna-TanjilR_30768_La_Tanjil_v1.0 ID=rna-TanjilR_30768_La_Tanjil_v1.0; Name=rna-TanjilR_30768_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=157bp
MGFFSFLGRVLFASLFILSAWQMFNEFDANGGPIAKELTPKFTAVKINLS
SKLGIGLPDFDVRQFIATIIILKGAGGLLFVFGSTLGAFLLLVLLAMTTP
LLYDFYNYKPSKPEYTLLLNDFLQSIALFGALLFFIGMKTSISRRQIRKK
TPKAKTV
back to top

mRNA from alignment at Chr_LG07-CM007367.1:13646558..13648617-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_30768_La_Tanjil_v1.0 ID=rna-TanjilR_30768_La_Tanjil_v1.0; Name=rna-TanjilR_30768; organism=Lupinus angustifolius; type=mRNA; length=2060bp; location=Sequence derived from: Chr_LG07-CM007367.1:13646558..13648617- (Lupinus angustifolius
ATGGGGTTCTTCTCCTTCCTGGGGCGTGTCCTCTTTGCTTCTCTCTTCAT CTTATCCGCATGGCAGATGTAAGTCCCTTCTCAGATCTATCACTTCTTTT GTTTTTTGTTTTATGTGTACCATTAATATTCATATAAAGGACATTACTTT CCACTTTCTTTTCATTTTTGAGATGTGGGTTTTCATTTTCCTGCTTTGGT TTCAACTATTGAATGTTAAAATTTGATTTTTTAGATTTGTCTTGTTAGTT GGAGATACACACATAGATTGTTTAGTTCGAGGTTGTTTGATTCCGTTATG GCTTATTGGGTTTCTTATGTTTAGTGATTATTTTTTGAAATTATTGAACC GTTAGATAATTAATTGTATTTTGCTTTCAAGTATAATGCATCTGTTAATG AAGAGTCATATCTCTTGTGTGTAGATAAAATGTACATGATATCAATTTAA ACTATCAATTATTAATCATCTCAAGATCCTGAAATGTTGAGATTGTGAAG TGGTGCATGACTATTAGCAACAACTAATGCAGTTGAAATCTTATGTTGCA AATGAAATAGGGTTTTTATGTTGTCTTTCGATTAAGTTAGCTCCTCGAGA TCATTTAAGGATTTTGATGTTTGCACTTAATACTAAGACTTTGATATCAA ATTAGGAACAGACTTCAAGATGATAGATCTTGTTGTCGAGGCAACTACAT ATGTCGTGAACATTTAGTTTATGTTATATATAAATCAAGTAATGAAAACA AGGTGAATTCCTTTTACTATGAACCAGGACTAAAATGAACATTCAATTAC GATCGCCATTGTTTCCTTTACAAACTGATAGCCTGTTAATCGTTAAGCCA CAAATATGAGATTCTCCTGCTCCAAATATTGACATCGGCAAATTCTAAAA CCATCTTTGAATCTCTGATCCAATTCCTGTGTTCCCAGTACCAAAATCTA ATATTGAATTGTTAGTTCGAATGACAGTTAGGCAGCCTTTTCTGCAGTCA AATCTGGTGTTATTTCGATTTGTAACTTTCCTAGAGATAGATGTGCATAA TCAATTTATGATTTATTAAAGTGTGTGACCTGTTTACCACATTCCTTGGT TGAATTCTTTTGATTAGGAAATCAAATTTAATGTACCTTAAGTGATTTAA GTTTGCTAATGTACCACTTTGTGCTTTCATACATAGCTGTAACAGTGATA TAATACTATTAAAGCAATATTTAGTACATTTTCATTGATATAGCATTTAT GTGCTAGGTTTAATGAATTTGATGCCAATGGTGGACCCATTGCAAAGGAG TTGACTCCCAAGTTCACTGCTGTGAAGATAAACTTGTCCTCCAAATTGGG GATAGGACTACCAGATTTTGATGTAAGACCAACTTTTCTTTCACTGTTAA GAAAGTCTGAGATTAATGCTTTGTCAATGAATATGATTTATGATAGAGCA TTATGACATCGTTTGATTTATGTAGTTGATTCCACCTAGTGGGATAAAGG CTTGGTTGTTGTTGTTCCCTTTCTGATTGAGATGTTAAATACAGGTTCGA CAATTTATTGCCACTATCATAATTCTAAAAGGGGCTGGAGGGCTTCTATT CGTGTTTGGCAGCACACTTGGAGCTTTTCTACTGGTAAGGGCTTCATCTC CTCCTAGGTTTGGAATGCGAAGAAAATGCTATTCTTTATCTTAAGTTTAA TTTAAGTTCTAACCATTGTTGTTTTTCCAATAAAAAAGAGCCCTGATTGT AAGTTTTCTCTTTTTGTAGCTTGTGCTTCTTGCAATGACTACTCCGCTTC TGTACGATTTTTATAACTATAAACCCAGCAAGCCTGAGTATACTCTACTG CTGAATGATTTCTTGCAGGTTTGTCCAAATTTCTTTCACTTTCTGTGTGT TTGGCTAATGATTTCATCTTTGTGAGAACTTAATATATTGTGTTTACTTT GATGGCAGAGCATAGCACTTTTTGGTGCATTGTTATTCTTTATAGGGATG AAGACCTCAATTTCTAGGAGACAAATCAGAAAGAAGACCCCCAAAGCAAA GACAGTTTAG
back to top

Coding sequence (CDS) from alignment at Chr_LG07-CM007367.1:13646558..13648617-

>rna-TanjilR_30768_La_Tanjil_v1.0 ID=rna-TanjilR_30768_La_Tanjil_v1.0; Name=rna-TanjilR_30768; organism=Lupinus angustifolius; type=CDS; length=474bp; location=Sequence derived from: Chr_LG07-CM007367.1:13646558..13648617- (Lupinus angustifolius
ATGGGGTTCTTCTCCTTCCTGGGGCGTGTCCTCTTTGCTTCTCTCTTCAT
CTTATCCGCATGGCAGATGTTTAATGAATTTGATGCCAATGGTGGACCCA
TTGCAAAGGAGTTGACTCCCAAGTTCACTGCTGTGAAGATAAACTTGTCC
TCCAAATTGGGGATAGGACTACCAGATTTTGATGTTCGACAATTTATTGC
CACTATCATAATTCTAAAAGGGGCTGGAGGGCTTCTATTCGTGTTTGGCA
GCACACTTGGAGCTTTTCTACTGCTTGTGCTTCTTGCAATGACTACTCCG
CTTCTGTACGATTTTTATAACTATAAACCCAGCAAGCCTGAGTATACTCT
ACTGCTGAATGATTTCTTGCAGAGCATAGCACTTTTTGGTGCATTGTTAT
TCTTTATAGGGATGAAGACCTCAATTTCTAGGAGACAAATCAGAAAGAAG
ACCCCCAAAGCAAAGACAGTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008637HR_lesion