rna-TanjilR_11723
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.662e-41 Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 1
Query: 5656 RKLLYRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
RK + R RGEQFLVRWAIPQLHDI+AL+ MVDPSL G YPAKSLS+FAD+ISRC
Sbjct: 679 RKSYDKKRDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRC 734 HSP 2 Score: 85.5001 bits (210), Expect = 1.662e-41 Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 2
Query: 5450 QLSGQLLTAYGYGAPEFDSGIYTYQSDVYSFGVVMLELLTGRQSHDR 5590
QLSGQLL AYGYGAPEF+ GIYT + DVYSFGVVMLELLTGR+S+D+
Sbjct: 638 QLSGQLLAAYGYGAPEFEYGIYTMKCDVYSFGVVMLELLTGRKSYDK 684 HSP 3 Score: 37.3502 bits (85), Expect = 1.662e-41 Identity = 17/30 (56.67%), Postives = 25/30 (83.33%), Query Frame = 2
Query: 5912 MQSEPEFRPAMSEVVLYLLNMIRRESQQSE 6001
+QSEPE+RP MSEVV L +MI+RE ++++
Sbjct: 735 VQSEPEYRPLMSEVVQDLSDMIQREHRRND 764 HSP 4 Score: 113.62 bits (283), Expect = 6.587e-24 Identity = 48/77 (62.34%), Postives = 65/77 (84.42%), Query Frame = 2
Query: 4637 LLAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWN 4867
L AV+KLDK++ +H+++ +FLELVN+IDRIRH NIV+L+G+C EH QRLLI+EYC +G+LHD LH DD K ++SWN
Sbjct: 502 LFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWN 578 HSP 5 Score: 73.559 bits (179), Expect = 1.639e-11 Identity = 40/69 (57.97%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 4030 ERVIVEPTTFRRGANVNPPRKSSDPISTFAKSFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPDGKV 4236
+RVI + T + KS P+ T K FT+ASLQQ+TNSFS ENLIG GMLGSVYRAELP GK+
Sbjct: 435 KRVIAKATEPAEASLKRTTSKSHGPL-TAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKL 502 HSP 6 Score: 70.0922 bits (170), Expect = 2.155e-10 Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 2
Query: 5060 YLHEQCQPPVVHRNFKSANIXXXXXXSVRVSDCGLAPLIASGSVSQV 5200
YLHE C PP +HRNFKSANILLDDD+ V VSDCGLAPLI+SG+VSQ+
Sbjct: 593 YLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQL 639 HSP 7 Score: 68.9366 bits (167), Expect = 4.669e-10 Identity = 42/86 (48.84%), Postives = 46/86 (53.49%), Query Frame = 1
Query: 1267 SVAAINSLHAALGSPALPGWVSSAGDPCGEGWQGVQCNGSSIQRMYVIPSA*LFILISL*VDDHKFYYYLTYYRVLNGANLGGELG 1524
VAAINSL AL SP LPGWV+S GDPCGE WQGV CN S ++ + ILIS ANLGGELG
Sbjct: 37 DVAAINSLFLALESPLLPGWVASGGDPCGESWQGVLCNASQVETI---------ILIS--------------------ANLGGELG 93 HSP 8 Score: 59.3066 bits (142), Expect = 4.062e-7 Identity = 50/129 (38.76%), Postives = 60/129 (46.51%), Query Frame = 2
Query: 2087 NENLLTGEIPDAFQSLPQLINL*GSVLK*YIL*TI*VKFFASLCMKHI*WSHELLCRDLSDNNLTGELPPSMENLASLTTLLVFCLSDISMNFYFYIKQTDYFLFYRRLQNNHLSGTLDVLQDLPLKDL 2473
N NLL+G+IPD FQ L +IN+ DLS NNL+G LPPSM+NL++LT+LL+ QNNHLSG LDVLQDLPLKDL
Sbjct: 154 NNNLLSGKIPDVFQDLGLMINI-----------------------------------DLSSNNLSGPLPPSMQNLSTLTSLLL--------------------------QNNHLSGELDVLQDLPLKDL 221
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.794e-34 Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 1
Query: 5656 RKLLYRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
RK L +R R EQ LVRWA PQLHDI+ALS MVDPSL+G YPAKSLS FADII+ C
Sbjct: 596 RKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALC 651 HSP 2 Score: 65.855 bits (159), Expect = 4.794e-34 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 2
Query: 5450 QLSGQLLTAYGYGAPEFD-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5587
Q+S Q++ ++GY APEF SGIYT +SDVY+FGVVMLELLTGR+ D
Sbjct: 554 QVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLD 600 HSP 3 Score: 38.1206 bits (87), Expect = 4.794e-34 Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 2
Query: 5912 MQSEPEFRPAMSEVVLYLLNMIRRES 5989
+Q EPEFRP MSEVV L+ +++R S
Sbjct: 652 IQPEPEFRPPMSEVVQQLVRLVQRAS 677 HSP 4 Score: 95.9005 bits (237), Expect = 1.850e-18 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 2
Query: 4622 FMNC*LLAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWNT 4870
F N ++A+KK+D Q++D FLE V+++ R+RH NIV L GYC EHGQRLL+YEY +G+L D LH++D+ ++WN
Sbjct: 414 FPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNA 496 HSP 5 Score: 58.5362 bits (140), Expect = 5.492e-7 Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 4117 AKSFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPDGKV 4236
A +T++SLQ TNSFSQEN+IG G LG VYRAE P+GK+
Sbjct: 380 ASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKI 419
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.506e-28 Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 2
Query: 4628 NC*LLAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWNT 4870
N L AVKKLDKR ++ Q+D EF+ELVN+ID IRH NIVEL+GYC EH QRLL+YEYC +G+L D LHSDDEFK K+SWNT
Sbjct: 506 NGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNT 586 HSP 2 Score: 97.8265 bits (242), Expect = 1.752e-25 Identity = 46/72 (63.89%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 5611 SSAYVLSFLCCKFIIRKLLY-RTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
S Y + + + ++ Y R R RGEQFLVRWAIPQLHDI+AL MVDPSL+G+YPAKSLS+FADIISRC
Sbjct: 670 SDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRC 741 HSP 3 Score: 43.1282 bits (100), Expect = 1.752e-25 Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query: 5912 MQSEPEFRPAMSEVVLYLLNMIRRE 5986
+QSEPEFRP MSEVV LL+MIRRE
Sbjct: 742 VQSEPEFRPLMSEVVQDLLDMIRRE 766 HSP 4 Score: 72.4034 bits (176), Expect = 2.302e-21 Identity = 52/131 (39.69%), Postives = 62/131 (47.33%), Query Frame = 2
Query: 2081 SLNENLLTGEIPDAFQSLPQLINL*GSVLK*YIL*TI*VKFFASLCMKHI*WSHELLCRDLSDNNLTGELPPSMENLASLTTLLVFCLSDISMNFYFYIKQTDYFLFYRRLQNNHLSGTLDVLQDLPLKDL 2473
SLN+NLL+GE+PD FQ+L LINL D+S NN++G LPPSMENL +LTTL R+QNN LSGTLDVLQ LPL+DL
Sbjct: 150 SLNDNLLSGELPDVFQNLVGLINL-----------------------------------DISSNNISGTLPPSMENLLTLTTL--------------------------RVQNNQLSGTLDVLQGLPLQDL 219 HSP 5 Score: 54.6842 bits (130), Expect = 2.302e-21 Identity = 33/71 (46.48%), Postives = 38/71 (53.52%), Query Frame = 3
Query: 1767 DLSNNHIGGSIPSTLPATLKNLYVITEL*YHIFTSNCAKVLMVFTCSFLASNQFTGSIPPSLSTLTGLTDM 1979
D SNN IGGSIPSTLP TL++ FL++NQFTGSIP SL TL+ L DM
Sbjct: 104 DFSNNRIGGSIPSTLPVTLQHF-------------------------FLSANQFTGSIPESLGTLSFLNDM 149 HSP 6 Score: 96.2857 bits (238), Expect = 1.547e-18 Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 2
Query: 5450 QLSGQLLTAYGYGAPEFDSGIYTYQSDVYSFGVVMLELLTGRQSHDR 5590
QLSGQLL AYGYGAPEFDSGIYT+QSDVYSFGVVMLELLTGR S+DR
Sbjct: 645 QLSGQLLAAYGYGAPEFDSGIYTWQSDVYSFGVVMLELLTGRMSYDR 691 HSP 7 Score: 75.0998 bits (183), Expect = 4.945e-12 Identity = 39/47 (82.98%), Postives = 45/47 (95.74%), Query Frame = 2
Query: 5060 YLHEQCQPPVVHRNFKSANIXXXXXXSVRVSDCGLAPLIASGSVSQV 5200
YLHE C+PP++HRNFKSAN+LLDDDLSV VSDCGLAPLI+SGSVSQ+
Sbjct: 600 YLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQL 646 HSP 8 Score: 69.707 bits (169), Expect = 2.408e-10 Identity = 41/89 (46.07%), Postives = 47/89 (52.81%), Query Frame = 1
Query: 1267 SVAAINSLHAALGSPALPGWVSSAGDPCGEGWQGVQCNGSSIQRMYVIPSA*LFILISL*VDDHKFYYYLTYYRVLNGANLGGELGDTL 1533
VAAIN L AALG+P LPGW++S GDPCGE WQG+ CN S I IS+ +N ANL GELGD L
Sbjct: 35 DVAAINGLFAALGAPVLPGWIASGGDPCGEAWQGIICNVSDI--------------ISI---------------TVNAANLQGELGDNL 94 HSP 9 Score: 68.9366 bits (167), Expect = 4.220e-10 Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 4111 TFAKSFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPDGKV 4236
T K ++IASLQQYT SF+QENLIG GMLGSVYRA LP+GK+
Sbjct: 468 TSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKL 509
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana OX=3702 GN=SUB PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.755e-27 Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 5656 RKLLYRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISR 5820
R+ RTRPRG Q L +WAIP+LHDI+AL+ MVDPSL G YP KSLS FADIISR
Sbjct: 691 RRPFDRTRPRGHQTLAQWAIPRLHDIDALTRMVDPSLHGAYPMKSLSRFADIISR 745 HSP 2 Score: 57.3806 bits (137), Expect = 2.755e-27 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 2
Query: 5480 GYGAPEFDSGIYTYQSDVYSFGVVMLELLTGRQSHDR 5590
GY APE + G YT QSDV+S GVVMLELLTGR+ DR
Sbjct: 660 GYAAPEVEYGSYTCQSDVFSLGVVMLELLTGRRPFDR 696 HSP 3 Score: 28.1054 bits (61), Expect = 2.755e-27 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 2
Query: 5909 TMQSEPEFRPAMSEVVLYLLNMI 5977
++Q EP FRP +SE+V L +MI
Sbjct: 746 SLQMEPGFRPPISEIVQDLQHMI 768 HSP 4 Score: 88.9669 bits (219), Expect = 3.347e-16 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 2
Query: 4637 LLAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWN 4867
LAVKKL Q D EFL LV+++ +++ +I+EL+GYC E GQRLL+YEYC +GSL DALH D + K++WN
Sbjct: 521 FLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWN 597 HSP 5 Score: 61.6178 bits (148), Expect = 7.792e-8 Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 4051 TTFRRGANVNPPRKSSDPISTFAKSFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPDGK 4233
T +R A+ P SS A FTIASLQQYTN+FS+EN+IG G +G+VYRAEL GK
Sbjct: 464 TASKRAAHFPPGLNSSSS----ATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGK 520
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.858e-26 Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 5677 RPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
+PR E+ LVRWA PQLHDI+ALS++ DP+L G YP KSLS FADII+ C
Sbjct: 606 KPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALC 654 HSP 2 Score: 52.373 bits (124), Expect = 1.858e-26 Identity = 26/37 (70.27%), Postives = 27/37 (72.97%), Query Frame = 2
Query: 5480 GYGAPEF-DSGIYTYQSDVYSFGVVMLELLTGRQSHD 5587
GY APE D YT +SDVYSFGVVMLELLTGR D
Sbjct: 567 GYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFD 603 HSP 3 Score: 38.891 bits (89), Expect = 1.858e-26 Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 2
Query: 5912 MQSEPEFRPAMSEVVLYLLNMIRRESQQ 5995
+Q EPEFRP MSEVV L+ M++R S +
Sbjct: 655 VQVEPEFRPPMSEVVEALVRMVQRSSMK 682 HSP 4 Score: 82.0333 bits (201), Expect = 3.859e-14 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 2
Query: 4640 LAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWNT 4870
LAVKK+D D K + +V S+ +IRH NI EL+GYC E G +L+YEY +GSLH+ LH D F ++WNT
Sbjct: 429 LAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNT 505
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.528e-26 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 5656 RKLLYRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
RK TR R EQ LVRWA PQLHDI+AL MVDP+L G YP KSLS FAD+I+ C
Sbjct: 617 RKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALC 672 HSP 2 Score: 54.299 bits (129), Expect = 7.528e-26 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 2
Query: 5480 GYGAPEFD-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5587
GY APE SG Y+ +SDVYSFGVVMLELLTGR+ D
Sbjct: 585 GYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFD 621 HSP 3 Score: 28.4906 bits (62), Expect = 7.528e-26 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 2
Query: 5912 MQSEPEFRPAMSE 5950
+Q EPEFRP MSE
Sbjct: 673 VQPEPEFRPPMSE 685 HSP 4 Score: 71.633 bits (174), Expect = 5.520e-11 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 2
Query: 4637 LLAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWNT 4870
+LAVKK+D D+F E+V+ I + H N+ +L GYC EHGQ L++YE+ +GSLHD LH +E + WN
Sbjct: 443 VLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNP 520
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.777e-26 Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 5656 RKLLYRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
RK TR R EQ LVRWA PQLHDI+AL+ MVDP+L G YP KSLS FAD+I+ C
Sbjct: 614 RKPFDSTRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 669 HSP 2 Score: 53.9138 bits (128), Expect = 7.777e-26 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 2
Query: 5480 GYGAPEFD-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5587
GY APE SG Y+ +SD+YSFGVVMLELLTGR+ D
Sbjct: 582 GYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFD 618 HSP 3 Score: 28.4906 bits (62), Expect = 7.777e-26 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 2
Query: 5912 MQSEPEFRPAMSE 5950
+Q EPEFRP MSE
Sbjct: 670 VQPEPEFRPPMSE 682 HSP 4 Score: 82.4185 bits (202), Expect = 2.795e-14 Identity = 35/78 (44.87%), Postives = 53/78 (67.95%), Query Frame = 2
Query: 4637 LLAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWNT 4870
+LAVKK+D H D+F+E+V+ I + H N+ +L+GYC EHGQ L++YE+ ++GSLHD LH +E + WN+
Sbjct: 440 VLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNS 517
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: PBL6_ARATH (Probable serine/threonine-protein kinase PBL6 OS=Arabidopsis thaliana OX=3702 GN=PBL6 PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.445e-13 Identity = 24/46 (52.17%), Postives = 38/46 (82.61%), Query Frame = 2
Query: 5453 LSGQLLTAYGYGAPEFD-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5587
+S +++ YGY AP++ +G T++SDVYSFGVV+LEL+TGR+++D
Sbjct: 258 VSTRVMGTYGYCAPDYALTGQLTFKSDVYSFGVVLLELITGRKAYD 303 HSP 2 Score: 44.669 bits (104), Expect = 1.445e-13 Identity = 23/56 (41.07%), Postives = 27/56 (48.21%), Query Frame = 1
Query: 5656 RKLLYRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
RK TR R Q LV WA P D + MVDP L+G YP + L I + C
Sbjct: 299 RKAYDNTRTRNHQSLVEWANPLFKDRKNFKKMVDPLLEGDYPVRGLYQALAIAAMC 354 HSP 3 Score: 59.6918 bits (143), Expect = 1.744e-7 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 2
Query: 4637 LLAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWNT 4870
++A+K+LD+ Q EF+ V ++ H N+V+LIG+C E QRLL+YEY GSL + LH K ++WNT
Sbjct: 123 VVAIKQLDRNGA--QGIREFVVEVLTLSLADHPNLVKLIGFCAEGVQRLLVYEYMPLGSLDNHLHDLPSGKNPLAWNT 198
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: PBL5_ARATH (Probable serine/threonine-protein kinase PBL5 OS=Arabidopsis thaliana OX=3702 GN=PBL5 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 4.437e-13 Identity = 23/46 (50.00%), Postives = 37/46 (80.43%), Query Frame = 2
Query: 5453 LSGQLLTAYGYGAPEFD-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5587
+S +++ YGY AP++ +G T++SD+YSFGVV+LEL+TGR++ D
Sbjct: 263 VSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 308 HSP 2 Score: 41.9726 bits (97), Expect = 4.437e-13 Identity = 22/56 (39.29%), Postives = 28/56 (50.00%), Query Frame = 1
Query: 5656 RKLLYRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
RK + T+ R +Q LV WA P D MVDP L G+YP + L I + C
Sbjct: 304 RKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMC 359 HSP 3 Score: 24.2534 bits (51), Expect = 4.437e-13 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2
Query: 5912 MQSEPEFRPAMSEVVLYL 5965
+Q +P RP +S+VVL L
Sbjct: 360 VQEQPTMRPVVSDVVLAL 377 HSP 4 Score: 62.003 bits (149), Expect = 3.596e-8 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 2
Query: 4637 LLAVKKLDKRTTDHQKDDEFLELVNSIDRIRHVNIVELIGYCLEHGQRLLIYEYCESGSLHDALHSDDEFKTKVSWNT 4870
++A+K+LD+ Q EF+ V ++ H N+V+LIG+C E QRLL+YEY GSL D LH K + WNT
Sbjct: 128 VVAIKQLDRNGV--QGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNT 203
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Match: PBL16_ARATH (Probable serine/threonine-protein kinase PBL16 OS=Arabidopsis thaliana OX=3702 GN=PBL16 PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.061e-12 Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 2
Query: 5450 QLSGQLLTAYGYGAPEFD-SGIYTYQSDVYSFGVVMLELLTGRQSHDR 5590
+S +++ YGY APE+ +G T SDVYSFGVV+LELLTGR+S D+
Sbjct: 241 HVSTRIMGTYGYAAPEYIMTGHLTPGSDVYSFGVVLLELLTGRKSLDK 288 HSP 2 Score: 45.0542 bits (105), Expect = 1.061e-12 Identity = 20/56 (35.71%), Postives = 34/56 (60.71%), Query Frame = 1
Query: 5656 RKLLYRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLDGRYPAKSLSNFADIISRC 5823
RK L ++RP EQ L+ WA+P L + + + ++VDP ++ YP K++ A + C
Sbjct: 283 RKSLDKSRPTREQNLIDWALPLLKEKKKVLNIVDPKMNCEYPVKAVQKAAMLAYHC 338 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_11723 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_11723_La_Tanjil_v1.0 ID=rna-TanjilR_11723_La_Tanjil_v1.0; Name=rna-TanjilR_11723; organism=Lupinus angustifolius; type=mRNA; length=6004bpback to top protein sequence of rna-TanjilR_11723_La_Tanjil_v1.0 >rna-TanjilR_11723_La_Tanjil_v1.0 ID=rna-TanjilR_11723_La_Tanjil_v1.0; Name=rna-TanjilR_11723_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=779bpback to top mRNA from alignment at Chr_LG08-CM007368.1:22074587..22080590+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_11723_La_Tanjil_v1.0 ID=rna-TanjilR_11723_La_Tanjil_v1.0; Name=rna-TanjilR_11723; organism=Lupinus angustifolius; type=mRNA; length=6004bp; location=Sequence derived from: Chr_LG08-CM007368.1:22074587..22080590+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:22074587..22080590+ >rna-TanjilR_11723_La_Tanjil_v1.0 ID=rna-TanjilR_11723_La_Tanjil_v1.0; Name=rna-TanjilR_11723; organism=Lupinus angustifolius; type=CDS; length=2340bp; location=Sequence derived from: Chr_LG08-CM007368.1:22074587..22080590+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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