rna-TanjilR_07226

Transcript Overview
Namerna-TanjilR_07226
Unique Namerna-TanjilR_07226_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length6329
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG08-CM007368.1supercontigChr_LG08-CM007368.1:22521736..22528064 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL123Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL250Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL545Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL594Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1265Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1349Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1377Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1382Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1092Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1325Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0948Pisum sativum Cameor genome v1aPisum sativum
anpsR0968Pisum sativum Cameor genome v1aPisum sativum
anpsR0978Pisum sativum Cameor genome v1aPisum sativum
anpvR1275Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1302Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1084Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1110Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1203Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR1274Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1085Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1112Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1110Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1102Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1180Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1167Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1191Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1179Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1073Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1097Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1036Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1063Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1203Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1243Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0998Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1062Cicer arietinum
ancarR1105Cicer arietinum
anccaR1056Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1080Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1276Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1283Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1186Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1266Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1275Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1283Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1275Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR1045Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1070Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1313Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1340Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014664383.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat7g157200.1Pisum sativum Cameor genome v1aPisum sativum
Psat07G0541200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun11g117200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.06G141100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va08G056050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.06G151200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058877260.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Phvul.011G103500.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr11.1141.1.6211316dVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun11g117200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_06G00991.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg5497.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.6g015720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.6g011600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan08g120100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
PvulFLAVERTChr11.622Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_09650.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_030045Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_07226gene-TanjilG_07226_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07226rna-TanjilR_07226_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_07226_La_Tanjil_v1.0rna-TanjilR_07226_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22527833..22528064rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22527833..22528064Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22526644..22526924rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22526644..22526924Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22526444..22526542rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22526444..22526542Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22525902..22525988rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22525902..22525988Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22525109..22525229rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22525109..22525229Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22524496..22524677rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22524496..22524677Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22524369..22524413rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22524369..22524413Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22523305..22523807rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22523305..22523807Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22522753..22523227rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22522753..22523227Lupinus angustifoliusCDS
rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22521736..22522440rna-TanjilR_07226_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22521736..22522440Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22527833..22528064rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22527833..22528064Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22526644..22526924rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22526644..22526924Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22526444..22526542rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22526444..22526542Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22525902..22525988rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22525902..22525988Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22525109..22525229rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22525109..22525229Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22524496..22524677rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22524496..22524677Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22524369..22524413rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22524369..22524413Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22523305..22523807rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22523305..22523807Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22522753..22523227rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22522753..22523227Lupinus angustifoliusexon
rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22521736..22522440rna-TanjilR_07226_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:22521736..22522440Lupinus angustifoliusexon


Homology
BLAST of rna-TanjilR_07226 vs. DB:Swiss
Match: RP6L3_ARATH (Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.107e-113
Identity = 122/178 (68.54%), Postives = 145/178 (81.46%), Query Frame = 3
Query: 4827 QLSRYVSRDLAKVVEEDPPAITLLFEPKGRPEDEDNDFYIQSKKNMCVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHASAEKYKRKIASEFGIPLYVRRVIHPXXXXXXX----------XXXXXVSPLQLRTAAMALLRHGPRMPPNRREELTEV*SYFF 5330
            +L  Y++R LAK+VEE+PPAI LLFEPKGRPEDE NDFYIQ+K+N+CVGCGEG HYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHA+AE+YK++IA+EFGIPL+VRRV+   +               +E+ GVSPL LR+AAMALLRHG RMP +RREEL +    ++
Sbjct:  537 KLEWYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSKEAQGTSSLVEDESTGDSEDAGVSPLHLRSAAMALLRHGNRMPSSRREELLQTVKMYY 714          

HSP 2 Score: 182.185 bits (461), Expect = 1.107e-113
Identity = 91/175 (52.00%), Postives = 123/175 (70.29%), Query Frame = 1
Query: 4252 FQARIHDENLKYVLSDQAIVVLASHPSASHSEIYSIIAQADVNMETGLNGFNPY--PSPVVCSHVGDIYHILADELVSHGDIYSVILQECLGKYGSCPLSIFNYALLVNSSPRPTL--AYKHSALKNPKR-ISRKASRDLFVQKFSCKSPVYHNCRIFANDGRLLCYCDRKKLEW 4761
               RIHDE+ +YVLSDQAIV L+     +  EIY  IA  D+  E+  +  +    P PV+CSH+ DIY ++ D+L    D+  V+L++CLG  G+CP+S+FNY+LLVN   + +   A K +  KN K+  +RKASR+LFV+KFSCK+PVYHNCRI+ANDGRLLCYCD++KLEW
Sbjct:  366 LMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQSPYPVICSHLDDIYKMILDKLAKLDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLSSHSAPKQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRKLEW 540          

HSP 3 Score: 142.51 bits (358), Expect = 1.225e-32
Identity = 83/228 (36.40%), Postives = 118/228 (51.75%), Query Frame = 3
Query: 5619 LQIVKRYYGGKEISEEDLERALLVGMSPHGKRKFEKKRGKTSRNSMGSTATEPGQENHACCTTTMGNMNISKVDAPNGTYANEETRKEGDRENFMAKDDFGNPSLASDLVVDGAVSAAFNGNTNTVKTTDYNESSDFAVNVDDICQSRRQPDEISDLTCPPRDEKSTQTKLNSKLSLLGHGPHGRQVVEHLLKEYGEDGIRQFCQRWRQVFVESLKPHFLPAGWDVKH 6302
            LQ VK YYGG+++SEEDLE+ALL+G+SPH +RK E+K+G + ++S                        ++ +D            K+ D  N                  DG   A F       ++T  ++S D     D          E++D  C      +T  + NSKLSLLGHGPHG+Q+VE+LL+E+GEDG+R FCQRWR+VFV+++ P  LP GW+V H
Sbjct:  707 LQTVKMYYGGRDLSEEDLEKALLIGLSPHERRKLERKKGVSFKHSA----------------------EVAGMD------------KQEDENN------------------DGEALADFEKIMTVERSTVVDDSGDGTSEGDG-------AKELNDTQC----NGNTLHQQNSKLSLLGHGPHGKQIVEYLLREHGEDGVRDFCQRWRKVFVDAVHPRHLPGGWNVSH 871          

HSP 4 Score: 105.531 bits (262), Expect = 2.628e-21
Identity = 61/101 (60.40%), Postives = 73/101 (72.28%), Query Frame = 3
Query: 1179 EFASHSHPFEAEIRALLKNHLPDIE---LRTEITDLEMNDSYVWVDTEMQLKELVSILSKEKLFAVDTEQHGLRSFLGFTALVQVSLFCF*PFVFDCIMLH 1472
            E  S+ HP+E EI  LL+N  P IE   LR E + LEM+DSYVWV+TE QLKEL  IL+KE++FAVDTEQH LRSFLGFTAL+Q+S      F+ D I LH
Sbjct:   81 EKPSNGHPYETEITVLLEN--PQIEFGFLRGECS-LEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEE-DFLVDTIALH 177          

HSP 5 Score: 92.4337 bits (228), Expect = 3.429e-17
Identity = 52/109 (47.71%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 1861 VFHGADNDVIWLQRDFHIYIVNLFDTSKVRY*RYLAMYHTEISTHA**LLEKFSFYN*LAASVLSFHVHVLQACEVLSKPQKSLAYLLETYCSVTTNKLLQV*PDHARP 2187
            VFHGADNDVIWLQRDFHIY+VN+FDT+K                                            ACEVLSKPQ+SLAYLLET C V TNKLLQ      RP
Sbjct:  195 VFHGADNDVIWLQRDFHIYVVNMFDTAK--------------------------------------------ACEVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRP 259          

HSP 6 Score: 72.4034 bits (176), Expect = 3.734e-11
Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 2836 REDWRQRPLSEEMVEYARMDAHYLLYIANCLITELKEL---DSGMP 2964
            REDWRQRPLSEEMV YAR DAHYLLYIA+ L TELK+L   DS  P
Sbjct:  252 REDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATEDSSSP 297          

HSP 7 Score: 51.6026 bits (122), Expect = 1.550e-7
Identity = 32/56 (57.14%), Postives = 46/56 (82.14%), Query Frame = 3
Query: 3378 LVSEDSCS-NDKYHFVLEATRRSNMICLQLFTKXXXXXXXXXXXXXXXXRHVSSEG 3542
            L +EDS S +D++HF+LEA+RRSNM CLQL+TKE+E  PG +A+SS++ RH++  G
Sbjct:  289 LATEDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHG 344          

HSP 8 Score: 28.4906 bits (62), Expect = 1.550e-7
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query: 3655 QNIVRQLCTWRDLM 3696
            + +VR+LC WRDLM
Sbjct:  354 EELVRKLCAWRDLM 367          

HSP 9 Score: 60.077 bits (144), Expect = 2.677e-7
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 2
Query: 1505 FNVIKQISTQEKDYLVDTIALHDSMGILRPVFANSSICKV 1624
            F  + QIST E+D+LVDTIALHD M ILRPVF++ +ICKV
Sbjct:  156 FTALIQISTHEEDFLVDTIALHDVMSILRPVFSDPNICKV 195          

HSP 10 Score: 58.5362 bits (140), Expect = 7.456e-7
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 1
Query:  124 CYLHSEPKPQRVFKRVLADNSYAQFKHLKLNDSTS 228
            CYLHSE KPQ  FKRVLADNSY++FKHLKL D++S
Sbjct:   43 CYLHSELKPQFGFKRVLADNSYSEFKHLKLVDASS 77          
BLAST of rna-TanjilR_07226 vs. DB:Swiss
Match: EXD2_HUMAN (Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens OX=9606 GN=EXD2 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.017e-28
Identity = 58/168 (34.52%), Postives = 93/168 (55.36%), Query Frame = 3
Query: 4839 YVSRDLAKVVEEDPPAITLLFEPKGRPEDEDNDFYIQSKKNMCVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHASAEKYKRKIASEFGIPL----YVRRVIHPXXXXXXXXXXXXVSPLQLRTAAMALLRHGPRMPPNRREELTEV*SYFF 5330
            Y+ + + ++V E+P  + L FEP GRPE    D+Y+  K+N+CV CG+ + Y+R  +IP  YR HFP  +K H SHD++LLC  CH +++      K+++A EF  P+     +R +  P +              Q+R+ A ALL +   +P  R+EEL +    F+
Sbjct:  379 YLDKGIGELVSEEPFVVKLRFEPAGRPESP-GDYYLMVKENLCVVCGKRDSYIRKNVIPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPIGSEEGLRLLEDPERR-------------QVRSGARALL-NAESLPTQRKEELLQALREFY 531          

HSP 2 Score: 43.5134 bits (101), Expect = 6.017e-28
Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 1
Query: 4615 KNPKRISRKASRDLFVQKFSCKSPVYHNCRIFANDGRLLCYCDRKKLEW 4761
            ++P++  RK    L V   + KSP+Y NC + A DG+ LC CDR+K +W
Sbjct:  333 RDPRKHKRKP---LGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQW 378          
BLAST of rna-TanjilR_07226 vs. DB:Swiss
Match: EXD2_MOUSE (Exonuclease 3'-5' domain-containing protein 2 OS=Mus musculus OX=10090 GN=Exd2 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.019e-27
Identity = 56/164 (34.15%), Postives = 90/164 (54.88%), Query Frame = 3
Query: 4839 YVSRDLAKVVEEDPPAITLLFEPKGRPEDEDNDFYIQSKKNMCVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHASAEKYKRKIASEFGIPLYVRRVIHPXXXXXXXXXXXXVSPLQLRTAAMALLRHGPRMPPNRREELTEV*SYFF 5330
            Y+ + + ++V ++P  + L FEP GRPE    D+Y+  K+N+CV CG+ + Y+R  IIP  YR HFP  +K H SHD++LLC  CH +++      K+++A EF  P+     +              +   Q+R+ A ALL +   +P +R+EEL      F+
Sbjct:  408 YLDKGIGELVSKEPFVVRLQFEPAGRPESP-GDYYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPIGSEEGLR---------LLEDLERRQVRSGARALL-NAESLPAHRKEELLHALREFY 560          

HSP 2 Score: 42.743 bits (99), Expect = 2.019e-27
Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 1
Query: 4615 KNPKRISRKASRDLFVQKFSCKSPVYHNCRIFANDGRLLCYCDRKKLEW 4761
            ++P++  RK    L V   + KSP+Y NC + A DG+ LC CDR+K +W
Sbjct:  362 RDPRKHKRKP---LGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQW 407          
BLAST of rna-TanjilR_07226 vs. DB:Swiss
Match: RRP6_YEAST (Exosome complex exonuclease RRP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRP6 PE=1 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 6.485e-13
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 3
Query: 1191 HSHPFEAEIRALLKNHLPDI-ELRTEITDLEMNDSY-VWVDTEMQLKELVSILSKEKLFAVDTEQHGLRSFLGFTALVQVS 1427
            + HP+E EI    + + P+I ++R EI     +DS  +WVDT  +L+ ++  L   K  AVD E H  RS+ G   L+Q+S
Sbjct:  179 YPHPYEYEIDH--QEYSPEILQIREEIPSKSWDDSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQIS 257          

HSP 2 Score: 46.2098 bits (108), Expect = 6.485e-13
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 2
Query: 1520 QISTQEKDYLVDTIALHDSMGILRPVFANSSICKV 1624
            QIST+E+DYLVDT+ L +++ IL  VF N SI KV
Sbjct:  255 QISTRERDYLVDTLKLRENLHILNEVFTNPSIVKV 289          
BLAST of rna-TanjilR_07226 vs. DB:Swiss
Match: RRP6_SCHPO (Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp6 PE=3 SV=2)

HSP 1 Score: 49.2914 bits (116), Expect = 4.792e-7
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 3
Query: 1197 HPFEAEIRALLKNHLPDI-ELRTEITDLEMNDS-YVWVDTEMQLKELVSILSKEKLFAVDTEQHGLRSFLGFTALVQVS 1427
            HP+E EI+  +  + P + E+   I    ++++  +WV TE QL +++  L   K  AVD E H  RSF GF  L+Q+S
Sbjct:  186 HPYEPEIQNSV--YPPWVSEMSNPIDTGSVDETEPIWVSTESQLSDMLKELQNSKEIAVDLEHHDYRSFRGFVCLMQIS 262          

HSP 2 Score: 29.6462 bits (65), Expect = 4.792e-7
Identity = 17/35 (48.57%), Postives = 24/35 (68.57%), Query Frame = 2
Query: 1520 QISTQEKDYLVDTIALHDSMGILRPVFANSSICKV 1624
            QIS +EKD++VDT+ L + +  L  VF N +I KV
Sbjct:  260 QISNREKDWIVDTLELREELEALNVVFTNPNIIKV 294          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_07226 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
RP6L3_ARATH1.107e-11368.54Protein RRP6-like 3 OS=Arabidopsis thaliana OX=370... [more]
EXD2_HUMAN6.017e-2834.52Exonuclease 3'-5' domain-containing protein 2 OS=H... [more]
EXD2_MOUSE2.019e-2734.15Exonuclease 3'-5' domain-containing protein 2 OS=M... [more]
RRP6_YEAST6.485e-1337.04Exosome complex exonuclease RRP6 OS=Saccharomyces ... [more]
RRP6_SCHPO4.792e-736.71Exosome complex exonuclease rrp6 OS=Schizosaccharo... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 129..269
e-value: 5.5E-12
score: 55.8
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 129..204
e-value: 1.5E-13
score: 50.9
coord: 205..268
e-value: 9.7E-13
score: 48.2
NoneNo IPR availableGENE3D1.10.150.80coord: 327..426
e-value: 2.5E-15
score: 58.2
NoneNo IPR availableGENE3D3.30.420.500coord: 40..204
e-value: 8.2E-33
score: 115.7
NoneNo IPR availableGENE3D3.30.420.500coord: 205..306
e-value: 3.4E-29
score: 104.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 716..731
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..731
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 334..419
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 89..279

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_07226_La_Tanjil_v1.0 ID=rna-TanjilR_07226_La_Tanjil_v1.0; Name=rna-TanjilR_07226; organism=Lupinus angustifolius; type=mRNA; length=6329bp
ATGAACAACGCACACAAGCTACGAGTTGCATTTGTAATAGCTACTACTAT
CGCAGCTATCTCCATCTTCTTCACCGTACGACGCCGTATCAGTCGTCGTA
AGCAGAAATCTTCTTCAAGTTCATGCTATTTACATTCCGAACCCAAACCA
CAGCGCGTGTTCAAGCGCGTCTTAGCGGATAACTCTTACGCTCAGTTTAA
ACACTTGAAGCTCAATGACTCCACTAGCGATGGTACATTTCTCACTGGTT
TATTTGTTTGTTCGTTTCGCGAGAAAATGAAGGCAAAAAATGAATCGCAT
GAGAATTTTGTGTGTTTAAAATCAATTCTGTTGTTCTGTCACAATAATCG
TAGCGAAGATATAATAGTTGTTGTTTTGTGTTTTTGTATAGAAAATATCG
AAGTAGCTCTGTTCAGTTTACTCTAGCAACTTATGTATTTGGATGCTGTG
AAAGTGAACGAATATGAATTGCGCTAAAACTTACTACATTTTAATTAATG
CTGATGCTAGATAGAAATAATGATAGCAGAGACGTTATAGCTGTTTTAAT
ATTTTCGCTCGCTTCCGATTCTTTGATGGAGATTTTTTTAGTTTATGCGT
CAGGTTAGAAAATTGAGTCCATGAAGTATAGTCACTTCAAAATAGTTTTT
AAGCACTTTTGTTATTTTGCAATTTTTTTTTTTAAAACATTATGGTTGGA
AATGTTTTAATATTATTTAGATAAACGTTAATATTTACGATAATGTATTT
AGAATGATTTTTACGTACTTTATAAAACATTTTTTTTCTCTTTCAATTTA
AGATTTACTTTTATGTTAATGTTATTCAAGTTTTATATCATACATCATAG
ATGTGTTGTGTCTTTTAATTTTTAAAACTTGGTGTACTTCCTAGACTGAA
GTAACTTAGTTCATTCCAGTGTAGCTGTGGCAGAATTCAGCAAGCGTTTT
GGAAATTTTGATGTTGCATAACTGGTTGAGGTTGAAGGAAGGTTAAAATT
CAAGTGTTAAGTTTTCATTTTCTATACTTCTTAGTGTTTTCAAAAAACAA
AGCCATAAAATATGCTGAAAGTTATAAAAGATGTTGTCTAAGTTTCTTTT
GGATTCTTGATGACCTATTGCATTGAGTTTTCTATGCAAGGTTTTGGAGA
TCAAGCTAAGTTTAGTGGTTTTCTTGCAGAGTTTGCTTCACATTCACATC
CGTTTGAGGCAGAGATTAGGGCATTGCTTAAAAATCATCTGCCTGACATC
GAGCTTAGGACTGAGATCACAGACTTGGAAATGAATGATTCATATGTTTG
GGTTGATACAGAGATGCAGTTGAAGGAACTGGTCAGTATATTGAGCAAAG
AGAAGTTATTTGCTGTTGACACGGAACAGCATGGCTTGCGATCTTTTCTA
GGGTTTACAGCATTAGTTCAAGTGAGTTTGTTCTGCTTTTAACCTTTCGT
CTTTGATTGCATAATGTTGCACTTTTTCCGACAAATTTGATGATATGTGT
GCTCTTTAATGTTATCAAGCAGATTTCTACACAGGAGAAAGATTATTTGG
TTGACACAATTGCCCTGCATGATTCAATGGGAATCCTTCGCCCTGTTTTT
GCCAATTCTTCTATTTGTAAAGTATGTAAGTTATTGGATCTTATTTCTAG
GCTGTACAATAAGAGTTGGATAATTTTTTGCCAATCCTTATATAAGTTCT
AATAAAAGATTATTTGTTATAACACACTGTTAGGATAATTTACATTTATT
ATATATATGTTGCCAGCGTCGGATGCTTAGGATTACACTATATAATTTAT
CTTTGTGTTTTCCCCCAGTCTATTTATTGCATTTTTCCCAAATTGAAAAT
TTATGGATAGGTGTTCCATGGGGCTGACAATGATGTTATCTGGCTACAAA
GGGATTTCCATATATATATCGTTAATCTATTTGATACTTCAAAGGTGAGA
TATTAACGTTACCTGGCCATGTACCATACTGAAATTTCTACTCATGCATG
ATAGTTATTGGAGAAGTTTTCCTTTTACAATTGACTGGCAGCTTCTGTTT
TATCATTTCATGTTCATGTACTGCAGGCATGCGAGGTGCTGTCAAAACCA
CAGAAATCACTAGCTTATTTACTCGAGACTTACTGCAGTGTGACAACAAA
TAAATTATTGCAGGTTTGACCTGATCATGCTCGACCTCTCCTTCTTTTGA
CGAGTTTGTTGATTGTCTTAAAAAAATAGCTAGAGTTTTTAGTATAATTT
TAACGCTTAATGCACAAGATCTCATCAGGTCTCCATAGTTAAGCGTGTTT
GGCCGAGAGTAGTACTAGGATGGGTGACCTTCTAGGAAGTCCTCGTGTTC
AAAGAAAAGCCGACCCCACTTAGTGGGATTGAGGTTTGGTTGTTGTTGTT
TAACACCTAAAAACTCATTTATATCAAGGACAAAAATTACTTAGTGGTGT
AGTTCACATAATAAATTTATTAGTATAACTTTTTAGTGGTCAGTATTTCA
ATTGGCATTGAGGTTCTCATGCAGAGAAGAGATTTCTAAATCATACATTT
GAAAATTTCCCTTCCCCACTGATTCACAAGTAGCCATCTGAGCAATGAAT
CGTATTGGACCAACAATTACATTAGCGATGAATTGTCTAAATTTTTGTAA
ACTAGTTATTTGTTACTGATGTAGGCTATAGTATGAGGGACATCAATGGA
TAGAACTATCAATACCTTTCTCTTTTACATACTAATATGTTATAAATAAG
ACAGAATATCATCATTATGGGTTTGGGGGTTTTTTTGTTAGTGACTTGAA
TCCTTATTTATGTTATATGCCTATCTCATTTGTAGCGTGAAGATTGGAGA
CAGCGCCCCCTCTCTGAGGAAATGGTAGAATATGCACGTATGGATGCACA
CTATTTGTTGTATATTGCTAACTGTTTGATCACTGAGCTCAAAGAACTGG
ACAGTGGTATGCCTTCTTGTCTGATATTTGTAAGGAAATAGAGAAAAAAT
AGAAATGAAGATTTGTTTCACCAAAATATTAAATATTTCTGAAGCAGAGA
AACTTTGAAAACCTACTCTGTTTAAGATCTCTTCCCCTACTGTATATTCC
TTCTTGTGGCCCAAAAGAGTGTGGCTAGAGAAATAAGCAGGTTAGATTAT
ACTCTATATCTCAGATATGCAAGATCTGCAACCATGGTTATGGTATGGCC
CCAAGTATTTTGCTATTTTGACAGGATAACTTTGATGTAAGAGCTTAATA
AATGTTTAAATGTTTCCCGAGTTTCACTAACTTAGGACATAAGCCTTTTC
TCTTTGCTACTTCTCAACTCAATAGTTGTTTAGGATCTTTCTTTGTTTAC
GTTGTTGTTCAAAATTCTGAATTTATTCTTGTATCAGAAGACTCTTGTTC
CAATGACAAATACCATTTTGTTCTTGAGGCTACTCGGCGTTCAAACATGA
TTTGCTTGCAACTTTTCACAAAAGAGAGTGAGGCATCTCCAGGAGAATCT
GCTGCATCATCATTACTGTCACGTCATGTGAGCAGTGAAGGTTTTCCTTC
AATTTCCAATGAAACCCAGGTTAGCTGCTTCTTATACAGATTGCAAATGA
TGTGAATGATCTAGTTGAATATATTCTTCTAATATGATTCTCTGATTTCA
GTTTCAGAATATTGTGAGGCAACTCTGCACATGGAGAGATCTGATGGTCA
GTTATATAATATATGAAGGTCCCTTAAGTTTAGTTACCGTCTAATAAATA
TTAGTCTTTCTCTTCTTCCCTGAGTTAGAAGAAGACTGCTTGAATGAAGT
TATTTTGCAAATTATGATATGAAAAAAAAATTCATGCCCCATGCCTAGAT
TGGAAATTCATTTGAGATAAACATGTTTTTTGACATCATGGTGACATTTG
TTTTTGTTAAATAAATAAACCTAGAAGTAATACTGAACTTAAAAGATGTG
AGGTTTAACTAAGTACAATTGAGTATTGTTTTAATATGTTGAGAATTGAG
ATTTATTTCAACTGGAAATAGTTAATATTTGTTCAGTTATTAATTAGTAA
TAATTAATCAAGTTAATCGTTTATCCTTAAATTTATTTTGCTATAATCCC
CCCCAGGAAAAAAGAATCTGCAAAACTATGTTAAACTGACTCTATCAATT
CAACATTACGTTGGTTGCTATATAAATTCTGGCATTTTGCTGAATGTTTT
CAATATCATATTTTGGTGACACGAGCTGATTAGTATTTGGCATGTTCATG
CTTCCAGGCTCGGATTCATGATGAGAACTTAAAATATGTACTGTCAGACC
AGGCAATTGTTGTTTTAGCAAGTCATCCTTCAGCAAGTCACTCTGAAATA
TACAGCATCATAGCTCAGGCTGATGTCAATATGGAAACGGGTCTGAATGG
TTTCAACCCTTACCCATCTCCTGTTGTTTGCAGCCACGTAGGTGACATTT
ATCATATACTTGCAGATGAGTTGGTTAGCCATGGTGATATCTATTCAGTT
ATTCTTCAGGAGTGCCTTGGTAAATATGGAAGTTGTCCACTTTCTATATT
TAATTATGCTTTATTGGTTAACAGTAGCCCAAGACCTACTTTAGCCTATA
AACACTCTGCCTTAAAAAATCCTAAACGAATTTCCCGGAAGGCTTCTCGA
GATTTGTTTGTTCAAAAGTTCTCTTGTAAATCTCCCGTTTATCATAATTG
CCGGATATTTGCTAATGATGGAAGATTGCTTTGTTATTGTGATCGGAAGA
AGCTTGAATGGTTGGTGCACTTTTCACTTACTTTTGTTCTGTTTTTAAAA
GTAGTTGTTTCTCTGTGATAAATGTTCAACTTTCCAGGTACGTTAGTCGT
GATCTCGCAAAAGTTGTTGAGGAGGACCCACCAGCCATAACGCTTCTTTT
TGAACCCAAAGGTCGCCCAGAGGATGAAGACAACGACTTTTATATCCAGA
GTAAGAAAAACATGTGTGTCGGGTGTGGTGAAGGAAATCACTACTTGCGG
TACCGGATAATCCCATCGTGTTACAGAGTGCATTTCCCTGAGCATTTGAA
AAGCCATCGTTCTCATGATATTGTCTTACTTTGTGTGGATTGCCATGAAG
TTGCCCATGCTTCTGCAGAGAAGTATAAGAGAAAAATAGCTTCTGAATTT
GGGATTCCTCTCTACGTTCGTAGAGTAATCCATCCAGGACAAGAGAATGA
AGAACAGACAGAGGAAGGAGGTGTATCTCCATTACAGTTACGGACAGCTG
CTATGGCTCTTCTGCGCCATGGACCAAGAATGCCTCCCAATCGCCGTGAA
GAACTGACTGAGGTTTGATCATATTTCTTTTATTGGTTGCTTTGGCACTT
GACACGGCCATGGTAGAGCCTCACTTGATAATGGATGTCTGAATTTTATT
GCAAATTATTAATTTGATGATTTGGACAGGTCAGAGATTAAATGTGGTTA
CAGCCAACTGGGAGTATCTGTGTTTAAGGAATCTTTTGAATATAGATCAG
ATGCATTTCAAATATGCCTTCTAAATTGAACTTTTGTAGTGATTATCATT
GTTCATTATTATTGAAGAGCTTCATTAATTGCGGAAGCTTTTGTTCATCA
GGTTATTTGTTAATTTATTTGCAGATTGTGAAGAGGTATTATGGAGGAAA
GGAGATATCTGAGGAAGATCTAGAAAGAGCTTTGTTAGTTGGCATGAGTC
CTCATGGAAAAAGAAAGTTTGAAAAGAAGAGAGGGAAAACTTCAAGAAAT
TCTATGGGGAGTACTGCTACAGAACCAGGACAGGAAAATCATGCTTGTTG
CACAACCACAATGGGTAATATGAACATATCAAAAGTTGATGCTCCTAATG
GTACATATGCAAATGAAGAAACAAGAAAGGAAGGGGATAGAGAAAATTTT
ATGGCAAAAGATGATTTTGGAAATCCCTCTTTAGCTTCTGATCTTGTGGT
TGATGGAGCTGTCTCTGCTGCTTTTAATGGAAATACAAACACAGTTAAAA
CTACGGATTATAACGAAAGCAGTGATTTTGCTGTAAATGTTGATGATATC
TGTCAGAGCCGAAGGCAGCCAGATGAAATTAGTGACTTGACCTGTCCCCC
CAGAGATGAAAAATCAACTCAAACTAAACTTAATTCAAAACTATCACTCT
TGGGCCACGGGCCACATGGCAGACAAGTAGTGGAACATTTACTGAAGGAA
TACGGTGAAGATGGCATTCGACAGTTTTGTCAAAGATGGAGACAAGTTTT
TGTTGAATCTTTAAAGCCACATTTTCTTCCTGCTGGCTGGGATGTGAAAC
ACAGGTATGCAATCATCATAAATTTATGA
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protein sequence of rna-TanjilR_07226_La_Tanjil_v1.0

>rna-TanjilR_07226_La_Tanjil_v1.0 ID=rna-TanjilR_07226_La_Tanjil_v1.0; Name=rna-TanjilR_07226_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=909bp
MNNAHKLRVAFVIATTIAAISIFFTVRRRISRRKQKSSSSSCYLHSEPKP
QRVFKRVLADNSYAQFKHLKLNDSTSDGFGDQAKFSGFLAEFASHSHPFE
AEIRALLKNHLPDIELRTEITDLEMNDSYVWVDTEMQLKELVSILSKEKL
FAVDTEQHGLRSFLGFTALVQISTQEKDYLVDTIALHDSMGILRPVFANS
SICKACEVLSKPQKSLAYLLETYCSVTTNKLLQREDWRQRPLSEEMVEYA
RMDAHYLLYIANCLITELKELDSEDSCSNDKYHFVLEATRRSNMICLQLF
TKESEASPGESAASSLLSRHVSSEGFPSISNETQFQNIVRQLCTWRDLMA
RIHDENLKYVLSDQAIVVLASHPSASHSEIYSIIAQADVNMETGLNGFNP
YPSPVVCSHVGDIYHILADELVSHGDIYSVILQECLGKYGSCPLSIFNYA
LLVNSSPRPTLAYKHSALKNPKRISRKASRDLFVQKFSCKSPVYHNCRIF
ANDGRLLCYCDRKKLEWYVSRDLAKVVEEDPPAITLLFEPKGRPEDEDND
FYIQSKKNMCVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCV
DCHEVAHASAEKYKRKIASEFGIPLYVRRVIHPGQENEEQTEEGGVSPLQ
LRTAAMALLRHGPRMPPNRREELTEIVKRYYGGKEISEEDLERALLVGMS
PHGKRKFEKKRGKTSRNSMGSTATEPGQENHACCTTTMGNMNISKVDAPN
GTYANEETRKEGDRENFMAKDDFGNPSLASDLVVDGAVSAAFNGNTNTVK
TTDYNESSDFAVNVDDICQSRRQPDEISDLTCPPRDEKSTQTKLNSKLSL
LGHGPHGRQVVEHLLKEYGEDGIRQFCQRWRQVFVESLKPHFLPAGWDVK
HRYAIIINL
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mRNA from alignment at Chr_LG08-CM007368.1:22521736..22528064-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_07226_La_Tanjil_v1.0 ID=rna-TanjilR_07226_La_Tanjil_v1.0; Name=rna-TanjilR_07226; organism=Lupinus angustifolius; type=mRNA; length=6329bp; location=Sequence derived from: Chr_LG08-CM007368.1:22521736..22528064- (Lupinus angustifolius
ATGAACAACGCACACAAGCTACGAGTTGCATTTGTAATAGCTACTACTAT CGCAGCTATCTCCATCTTCTTCACCGTACGACGCCGTATCAGTCGTCGTA AGCAGAAATCTTCTTCAAGTTCATGCTATTTACATTCCGAACCCAAACCA CAGCGCGTGTTCAAGCGCGTCTTAGCGGATAACTCTTACGCTCAGTTTAA ACACTTGAAGCTCAATGACTCCACTAGCGATGGTACATTTCTCACTGGTT TATTTGTTTGTTCGTTTCGCGAGAAAATGAAGGCAAAAAATGAATCGCAT GAGAATTTTGTGTGTTTAAAATCAATTCTGTTGTTCTGTCACAATAATCG TAGCGAAGATATAATAGTTGTTGTTTTGTGTTTTTGTATAGAAAATATCG AAGTAGCTCTGTTCAGTTTACTCTAGCAACTTATGTATTTGGATGCTGTG AAAGTGAACGAATATGAATTGCGCTAAAACTTACTACATTTTAATTAATG CTGATGCTAGATAGAAATAATGATAGCAGAGACGTTATAGCTGTTTTAAT ATTTTCGCTCGCTTCCGATTCTTTGATGGAGATTTTTTTAGTTTATGCGT CAGGTTAGAAAATTGAGTCCATGAAGTATAGTCACTTCAAAATAGTTTTT AAGCACTTTTGTTATTTTGCAATTTTTTTTTTTAAAACATTATGGTTGGA AATGTTTTAATATTATTTAGATAAACGTTAATATTTACGATAATGTATTT AGAATGATTTTTACGTACTTTATAAAACATTTTTTTTCTCTTTCAATTTA AGATTTACTTTTATGTTAATGTTATTCAAGTTTTATATCATACATCATAG ATGTGTTGTGTCTTTTAATTTTTAAAACTTGGTGTACTTCCTAGACTGAA GTAACTTAGTTCATTCCAGTGTAGCTGTGGCAGAATTCAGCAAGCGTTTT GGAAATTTTGATGTTGCATAACTGGTTGAGGTTGAAGGAAGGTTAAAATT CAAGTGTTAAGTTTTCATTTTCTATACTTCTTAGTGTTTTCAAAAAACAA AGCCATAAAATATGCTGAAAGTTATAAAAGATGTTGTCTAAGTTTCTTTT GGATTCTTGATGACCTATTGCATTGAGTTTTCTATGCAAGGTTTTGGAGA TCAAGCTAAGTTTAGTGGTTTTCTTGCAGAGTTTGCTTCACATTCACATC CGTTTGAGGCAGAGATTAGGGCATTGCTTAAAAATCATCTGCCTGACATC GAGCTTAGGACTGAGATCACAGACTTGGAAATGAATGATTCATATGTTTG GGTTGATACAGAGATGCAGTTGAAGGAACTGGTCAGTATATTGAGCAAAG AGAAGTTATTTGCTGTTGACACGGAACAGCATGGCTTGCGATCTTTTCTA GGGTTTACAGCATTAGTTCAAGTGAGTTTGTTCTGCTTTTAACCTTTCGT CTTTGATTGCATAATGTTGCACTTTTTCCGACAAATTTGATGATATGTGT GCTCTTTAATGTTATCAAGCAGATTTCTACACAGGAGAAAGATTATTTGG TTGACACAATTGCCCTGCATGATTCAATGGGAATCCTTCGCCCTGTTTTT GCCAATTCTTCTATTTGTAAAGTATGTAAGTTATTGGATCTTATTTCTAG GCTGTACAATAAGAGTTGGATAATTTTTTGCCAATCCTTATATAAGTTCT AATAAAAGATTATTTGTTATAACACACTGTTAGGATAATTTACATTTATT ATATATATGTTGCCAGCGTCGGATGCTTAGGATTACACTATATAATTTAT CTTTGTGTTTTCCCCCAGTCTATTTATTGCATTTTTCCCAAATTGAAAAT TTATGGATAGGTGTTCCATGGGGCTGACAATGATGTTATCTGGCTACAAA GGGATTTCCATATATATATCGTTAATCTATTTGATACTTCAAAGGTGAGA TATTAACGTTACCTGGCCATGTACCATACTGAAATTTCTACTCATGCATG ATAGTTATTGGAGAAGTTTTCCTTTTACAATTGACTGGCAGCTTCTGTTT TATCATTTCATGTTCATGTACTGCAGGCATGCGAGGTGCTGTCAAAACCA CAGAAATCACTAGCTTATTTACTCGAGACTTACTGCAGTGTGACAACAAA TAAATTATTGCAGGTTTGACCTGATCATGCTCGACCTCTCCTTCTTTTGA CGAGTTTGTTGATTGTCTTAAAAAAATAGCTAGAGTTTTTAGTATAATTT TAACGCTTAATGCACAAGATCTCATCAGGTCTCCATAGTTAAGCGTGTTT GGCCGAGAGTAGTACTAGGATGGGTGACCTTCTAGGAAGTCCTCGTGTTC AAAGAAAAGCCGACCCCACTTAGTGGGATTGAGGTTTGGTTGTTGTTGTT TAACACCTAAAAACTCATTTATATCAAGGACAAAAATTACTTAGTGGTGT AGTTCACATAATAAATTTATTAGTATAACTTTTTAGTGGTCAGTATTTCA ATTGGCATTGAGGTTCTCATGCAGAGAAGAGATTTCTAAATCATACATTT GAAAATTTCCCTTCCCCACTGATTCACAAGTAGCCATCTGAGCAATGAAT CGTATTGGACCAACAATTACATTAGCGATGAATTGTCTAAATTTTTGTAA ACTAGTTATTTGTTACTGATGTAGGCTATAGTATGAGGGACATCAATGGA TAGAACTATCAATACCTTTCTCTTTTACATACTAATATGTTATAAATAAG ACAGAATATCATCATTATGGGTTTGGGGGTTTTTTTGTTAGTGACTTGAA TCCTTATTTATGTTATATGCCTATCTCATTTGTAGCGTGAAGATTGGAGA CAGCGCCCCCTCTCTGAGGAAATGGTAGAATATGCACGTATGGATGCACA CTATTTGTTGTATATTGCTAACTGTTTGATCACTGAGCTCAAAGAACTGG ACAGTGGTATGCCTTCTTGTCTGATATTTGTAAGGAAATAGAGAAAAAAT AGAAATGAAGATTTGTTTCACCAAAATATTAAATATTTCTGAAGCAGAGA AACTTTGAAAACCTACTCTGTTTAAGATCTCTTCCCCTACTGTATATTCC TTCTTGTGGCCCAAAAGAGTGTGGCTAGAGAAATAAGCAGGTTAGATTAT ACTCTATATCTCAGATATGCAAGATCTGCAACCATGGTTATGGTATGGCC CCAAGTATTTTGCTATTTTGACAGGATAACTTTGATGTAAGAGCTTAATA AATGTTTAAATGTTTCCCGAGTTTCACTAACTTAGGACATAAGCCTTTTC TCTTTGCTACTTCTCAACTCAATAGTTGTTTAGGATCTTTCTTTGTTTAC GTTGTTGTTCAAAATTCTGAATTTATTCTTGTATCAGAAGACTCTTGTTC CAATGACAAATACCATTTTGTTCTTGAGGCTACTCGGCGTTCAAACATGA TTTGCTTGCAACTTTTCACAAAAGAGAGTGAGGCATCTCCAGGAGAATCT GCTGCATCATCATTACTGTCACGTCATGTGAGCAGTGAAGGTTTTCCTTC AATTTCCAATGAAACCCAGGTTAGCTGCTTCTTATACAGATTGCAAATGA TGTGAATGATCTAGTTGAATATATTCTTCTAATATGATTCTCTGATTTCA GTTTCAGAATATTGTGAGGCAACTCTGCACATGGAGAGATCTGATGGTCA GTTATATAATATATGAAGGTCCCTTAAGTTTAGTTACCGTCTAATAAATA TTAGTCTTTCTCTTCTTCCCTGAGTTAGAAGAAGACTGCTTGAATGAAGT TATTTTGCAAATTATGATATGAAAAAAAAATTCATGCCCCATGCCTAGAT TGGAAATTCATTTGAGATAAACATGTTTTTTGACATCATGGTGACATTTG TTTTTGTTAAATAAATAAACCTAGAAGTAATACTGAACTTAAAAGATGTG AGGTTTAACTAAGTACAATTGAGTATTGTTTTAATATGTTGAGAATTGAG ATTTATTTCAACTGGAAATAGTTAATATTTGTTCAGTTATTAATTAGTAA TAATTAATCAAGTTAATCGTTTATCCTTAAATTTATTTTGCTATAATCCC CCCCAGGAAAAAAGAATCTGCAAAACTATGTTAAACTGACTCTATCAATT CAACATTACGTTGGTTGCTATATAAATTCTGGCATTTTGCTGAATGTTTT CAATATCATATTTTGGTGACACGAGCTGATTAGTATTTGGCATGTTCATG CTTCCAGGCTCGGATTCATGATGAGAACTTAAAATATGTACTGTCAGACC AGGCAATTGTTGTTTTAGCAAGTCATCCTTCAGCAAGTCACTCTGAAATA TACAGCATCATAGCTCAGGCTGATGTCAATATGGAAACGGGTCTGAATGG TTTCAACCCTTACCCATCTCCTGTTGTTTGCAGCCACGTAGGTGACATTT ATCATATACTTGCAGATGAGTTGGTTAGCCATGGTGATATCTATTCAGTT ATTCTTCAGGAGTGCCTTGGTAAATATGGAAGTTGTCCACTTTCTATATT TAATTATGCTTTATTGGTTAACAGTAGCCCAAGACCTACTTTAGCCTATA AACACTCTGCCTTAAAAAATCCTAAACGAATTTCCCGGAAGGCTTCTCGA GATTTGTTTGTTCAAAAGTTCTCTTGTAAATCTCCCGTTTATCATAATTG CCGGATATTTGCTAATGATGGAAGATTGCTTTGTTATTGTGATCGGAAGA AGCTTGAATGGTTGGTGCACTTTTCACTTACTTTTGTTCTGTTTTTAAAA GTAGTTGTTTCTCTGTGATAAATGTTCAACTTTCCAGGTACGTTAGTCGT GATCTCGCAAAAGTTGTTGAGGAGGACCCACCAGCCATAACGCTTCTTTT TGAACCCAAAGGTCGCCCAGAGGATGAAGACAACGACTTTTATATCCAGA GTAAGAAAAACATGTGTGTCGGGTGTGGTGAAGGAAATCACTACTTGCGG TACCGGATAATCCCATCGTGTTACAGAGTGCATTTCCCTGAGCATTTGAA AAGCCATCGTTCTCATGATATTGTCTTACTTTGTGTGGATTGCCATGAAG TTGCCCATGCTTCTGCAGAGAAGTATAAGAGAAAAATAGCTTCTGAATTT GGGATTCCTCTCTACGTTCGTAGAGTAATCCATCCAGGACAAGAGAATGA AGAACAGACAGAGGAAGGAGGTGTATCTCCATTACAGTTACGGACAGCTG CTATGGCTCTTCTGCGCCATGGACCAAGAATGCCTCCCAATCGCCGTGAA GAACTGACTGAGGTTTGATCATATTTCTTTTATTGGTTGCTTTGGCACTT GACACGGCCATGGTAGAGCCTCACTTGATAATGGATGTCTGAATTTTATT GCAAATTATTAATTTGATGATTTGGACAGGTCAGAGATTAAATGTGGTTA CAGCCAACTGGGAGTATCTGTGTTTAAGGAATCTTTTGAATATAGATCAG ATGCATTTCAAATATGCCTTCTAAATTGAACTTTTGTAGTGATTATCATT GTTCATTATTATTGAAGAGCTTCATTAATTGCGGAAGCTTTTGTTCATCA GGTTATTTGTTAATTTATTTGCAGATTGTGAAGAGGTATTATGGAGGAAA GGAGATATCTGAGGAAGATCTAGAAAGAGCTTTGTTAGTTGGCATGAGTC CTCATGGAAAAAGAAAGTTTGAAAAGAAGAGAGGGAAAACTTCAAGAAAT TCTATGGGGAGTACTGCTACAGAACCAGGACAGGAAAATCATGCTTGTTG CACAACCACAATGGGTAATATGAACATATCAAAAGTTGATGCTCCTAATG GTACATATGCAAATGAAGAAACAAGAAAGGAAGGGGATAGAGAAAATTTT ATGGCAAAAGATGATTTTGGAAATCCCTCTTTAGCTTCTGATCTTGTGGT TGATGGAGCTGTCTCTGCTGCTTTTAATGGAAATACAAACACAGTTAAAA CTACGGATTATAACGAAAGCAGTGATTTTGCTGTAAATGTTGATGATATC TGTCAGAGCCGAAGGCAGCCAGATGAAATTAGTGACTTGACCTGTCCCCC CAGAGATGAAAAATCAACTCAAACTAAACTTAATTCAAAACTATCACTCT TGGGCCACGGGCCACATGGCAGACAAGTAGTGGAACATTTACTGAAGGAA TACGGTGAAGATGGCATTCGACAGTTTTGTCAAAGATGGAGACAAGTTTT TGTTGAATCTTTAAAGCCACATTTTCTTCCTGCTGGCTGGGATGTGAAAC ACAGGTATGCAATCATCATAAATTTATGA
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Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:22521736..22528064-

>rna-TanjilR_07226_La_Tanjil_v1.0 ID=rna-TanjilR_07226_La_Tanjil_v1.0; Name=rna-TanjilR_07226; organism=Lupinus angustifolius; type=CDS; length=2730bp; location=Sequence derived from: Chr_LG08-CM007368.1:22521736..22528064- (Lupinus angustifolius
ATGAACAACGCACACAAGCTACGAGTTGCATTTGTAATAGCTACTACTAT
CGCAGCTATCTCCATCTTCTTCACCGTACGACGCCGTATCAGTCGTCGTA
AGCAGAAATCTTCTTCAAGTTCATGCTATTTACATTCCGAACCCAAACCA
CAGCGCGTGTTCAAGCGCGTCTTAGCGGATAACTCTTACGCTCAGTTTAA
ACACTTGAAGCTCAATGACTCCACTAGCGATGGTTTTGGAGATCAAGCTA
AGTTTAGTGGTTTTCTTGCAGAGTTTGCTTCACATTCACATCCGTTTGAG
GCAGAGATTAGGGCATTGCTTAAAAATCATCTGCCTGACATCGAGCTTAG
GACTGAGATCACAGACTTGGAAATGAATGATTCATATGTTTGGGTTGATA
CAGAGATGCAGTTGAAGGAACTGGTCAGTATATTGAGCAAAGAGAAGTTA
TTTGCTGTTGACACGGAACAGCATGGCTTGCGATCTTTTCTAGGGTTTAC
AGCATTAGTTCAAATTTCTACACAGGAGAAAGATTATTTGGTTGACACAA
TTGCCCTGCATGATTCAATGGGAATCCTTCGCCCTGTTTTTGCCAATTCT
TCTATTTGTAAAGCATGCGAGGTGCTGTCAAAACCACAGAAATCACTAGC
TTATTTACTCGAGACTTACTGCAGTGTGACAACAAATAAATTATTGCAGC
GTGAAGATTGGAGACAGCGCCCCCTCTCTGAGGAAATGGTAGAATATGCA
CGTATGGATGCACACTATTTGTTGTATATTGCTAACTGTTTGATCACTGA
GCTCAAAGAACTGGACAGTGAAGACTCTTGTTCCAATGACAAATACCATT
TTGTTCTTGAGGCTACTCGGCGTTCAAACATGATTTGCTTGCAACTTTTC
ACAAAAGAGAGTGAGGCATCTCCAGGAGAATCTGCTGCATCATCATTACT
GTCACGTCATGTGAGCAGTGAAGGTTTTCCTTCAATTTCCAATGAAACCC
AGTTTCAGAATATTGTGAGGCAACTCTGCACATGGAGAGATCTGATGGCT
CGGATTCATGATGAGAACTTAAAATATGTACTGTCAGACCAGGCAATTGT
TGTTTTAGCAAGTCATCCTTCAGCAAGTCACTCTGAAATATACAGCATCA
TAGCTCAGGCTGATGTCAATATGGAAACGGGTCTGAATGGTTTCAACCCT
TACCCATCTCCTGTTGTTTGCAGCCACGTAGGTGACATTTATCATATACT
TGCAGATGAGTTGGTTAGCCATGGTGATATCTATTCAGTTATTCTTCAGG
AGTGCCTTGGTAAATATGGAAGTTGTCCACTTTCTATATTTAATTATGCT
TTATTGGTTAACAGTAGCCCAAGACCTACTTTAGCCTATAAACACTCTGC
CTTAAAAAATCCTAAACGAATTTCCCGGAAGGCTTCTCGAGATTTGTTTG
TTCAAAAGTTCTCTTGTAAATCTCCCGTTTATCATAATTGCCGGATATTT
GCTAATGATGGAAGATTGCTTTGTTATTGTGATCGGAAGAAGCTTGAATG
GTACGTTAGTCGTGATCTCGCAAAAGTTGTTGAGGAGGACCCACCAGCCA
TAACGCTTCTTTTTGAACCCAAAGGTCGCCCAGAGGATGAAGACAACGAC
TTTTATATCCAGAGTAAGAAAAACATGTGTGTCGGGTGTGGTGAAGGAAA
TCACTACTTGCGGTACCGGATAATCCCATCGTGTTACAGAGTGCATTTCC
CTGAGCATTTGAAAAGCCATCGTTCTCATGATATTGTCTTACTTTGTGTG
GATTGCCATGAAGTTGCCCATGCTTCTGCAGAGAAGTATAAGAGAAAAAT
AGCTTCTGAATTTGGGATTCCTCTCTACGTTCGTAGAGTAATCCATCCAG
GACAAGAGAATGAAGAACAGACAGAGGAAGGAGGTGTATCTCCATTACAG
TTACGGACAGCTGCTATGGCTCTTCTGCGCCATGGACCAAGAATGCCTCC
CAATCGCCGTGAAGAACTGACTGAGATTGTGAAGAGGTATTATGGAGGAA
AGGAGATATCTGAGGAAGATCTAGAAAGAGCTTTGTTAGTTGGCATGAGT
CCTCATGGAAAAAGAAAGTTTGAAAAGAAGAGAGGGAAAACTTCAAGAAA
TTCTATGGGGAGTACTGCTACAGAACCAGGACAGGAAAATCATGCTTGTT
GCACAACCACAATGGGTAATATGAACATATCAAAAGTTGATGCTCCTAAT
GGTACATATGCAAATGAAGAAACAAGAAAGGAAGGGGATAGAGAAAATTT
TATGGCAAAAGATGATTTTGGAAATCCCTCTTTAGCTTCTGATCTTGTGG
TTGATGGAGCTGTCTCTGCTGCTTTTAATGGAAATACAAACACAGTTAAA
ACTACGGATTATAACGAAAGCAGTGATTTTGCTGTAAATGTTGATGATAT
CTGTCAGAGCCGAAGGCAGCCAGATGAAATTAGTGACTTGACCTGTCCCC
CCAGAGATGAAAAATCAACTCAAACTAAACTTAATTCAAAACTATCACTC
TTGGGCCACGGGCCACATGGCAGACAAGTAGTGGAACATTTACTGAAGGA
ATACGGTGAAGATGGCATTCGACAGTTTTGTCAAAGATGGAGACAAGTTT
TTGTTGAATCTTTAAAGCCACATTTTCTTCCTGCTGGCTGGGATGTGAAA
CACAGGTATGCAATCATCATAAATTTATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR010997HRDC-like_sf
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0044237cellular metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:00084083'-5' exonuclease activity
GO:0003824catalytic activity
GO:0000166nucleotide binding