rna-TanjilR_23606

Transcript Overview
Namerna-TanjilR_23606
Unique Namerna-TanjilR_23606_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length416
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG08-CM007368.1supercontigChr_LG08-CM007368.1:23477915..23478330 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL122Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL254Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL543Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL591Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL606Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1264Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1342Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1443Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1454Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1093Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1116Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1132Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1146Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1288Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1306Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1333Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1355Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0949Pisum sativum Cameor genome v1aPisum sativum
anpsR0964Pisum sativum Cameor genome v1aPisum sativum
anpsR0970Pisum sativum Cameor genome v1aPisum sativum
anpsR0971Pisum sativum Cameor genome v1aPisum sativum
anpvR1275Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1302Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1084Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1110Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1202Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR1274Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1085Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1087Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1107Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1111Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1111Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1103Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1175Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR1179Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1165Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1187Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1174Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1072Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1089Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1036Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1206Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1229Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1231Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1240Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1264Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1286Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0999Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR1045Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1216Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1062Cicer arietinum
ancarR1063Cicer arietinum
ancarR1097Cicer arietinum
ancarR1105Cicer arietinum
anccaR1056Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1080Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1224Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1271Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1276Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1283Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1148Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1165Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1186Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1261Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1266Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1275Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1283Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1275Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1295Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR1045Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1313Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1340Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr11.501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va08G061290.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.1g026600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigst.06G157600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_004487019.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg43574.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
XM_058924171.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_09455.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_02559Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr11.1313.1.6211316fVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_00499.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_06G01183.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.06G178800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_022201Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_11226.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat05G0775400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.011G083400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014638479.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun11g137600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat5g280640.1Pisum sativum Cameor genome v1aPisum sativum
Vigun11g137600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_03220Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_23606gene-TanjilG_23606_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23606rna-TanjilR_23606_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_23606_La_Tanjil_v1.0rna-TanjilR_23606_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23606_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23478304..23478330rna-TanjilR_23606_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23478304..23478330Lupinus angustifoliusCDS
rna-TanjilR_23606_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23477915..23478229rna-TanjilR_23606_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23477915..23478229Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23606_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23478304..23478330rna-TanjilR_23606_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23478304..23478330Lupinus angustifoliusexon
rna-TanjilR_23606_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23477915..23478229rna-TanjilR_23606_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23477915..23478229Lupinus angustifoliusexon


Homology
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: KINB3_ARATH (SNF1-related protein kinase regulatory subunit beta-3 OS=Arabidopsis thaliana OX=3702 GN=KINB3 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.153e-40
Identity = 69/106 (65.09%), Postives = 83/106 (78.30%), Query Frame = 3
Query:  102 EEPTVVGFEVPKSPDSSYNNVYTGHEDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPL---PQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPVQR 410
            E+ TVVGFEVP SP SSYNNVY+  EDE R+PP  P HLQH+LL        + GS+ L   PQNV+LNHLYIENR++ RSVVALG++HRFR+K+VTVV+YKPVQR
Sbjct:   10 EDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLG-------NQGSMELAYAPQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQR 108          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: KINB2_ARATH (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.543e-32
Identity = 61/118 (51.69%), Postives = 85/118 (72.03%), Query Frame = 3
Query:   57 NYLSVVGLKDTIHSQEEPTVVGFEVPKSPDSSYNNVYTGHEDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPVQR 410
            N  +++ L+D +  ++  ++ GFE P+SP++SY+N+  G ED ++EPP  P HLQ TLL+ PA + D    LP PQ+VILNHLY++  +S  SVVALG THRF +KYVTVVLYK +QR
Sbjct:  173 NTFNILDLQDYV-PEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: KINB1_ARATH (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.667e-21
Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query:  111 TVVGFEVPKSPDSSYNNVYTGHEDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPVQR 410
            ++V FE P SPD SY       ED A+EP   P  L  TLL     + + +     PQ+V+LNH++IE   + +S+VALG THRF SKY+TVVLYKP+ R
Sbjct:  188 SIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLG----TTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: AAKB2_RAT (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.758e-10
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 3
Query:  177 EDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPV 404
            E+  + PP  P HL   +L+   N       LP P +V+LNHLY     +  SV+ L  THR++ KYVT +LYKP+
Sbjct:  198 EERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYA--LSTKDSVMVLSATHRYKKKYVTTLLYKPI 271          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: AAKB2_HUMAN (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 6.290e-10
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 3
Query:  177 EDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPV 404
            E+  + PP  P HL   +L+   N       LP P +V+LNHLY  + +   SV+ L  THR++ KYVT +LYKP+
Sbjct:  199 EERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKD--SVMVLSATHRYKKKYVTTLLYKPI 272          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: AAKB2_MOUSE (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 6.508e-10
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 3
Query:  177 EDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPV 404
            E+  + PP  P HL   +L+   N       LP P +V+LNHLY  + +   SV+ L  THR++ KYVT +LYKP+
Sbjct:  198 EERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKD--SVMVLSATHRYKKKYVTTLLYKPI 271          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: AAKB1_PONAB (5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii OX=9601 GN=PRKAB1 PE=2 SV=3)

HSP 1 Score: 56.225 bits (134), Expect = 5.075e-9
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 3
Query:  177 EDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPV 404
            E+  R PP  P HL   +L+           LP P +V+LNHLY  + +    V+ L  THR++ KYVT +LYKP+
Sbjct:  197 EERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKD--GVMVLSATHRYKKKYVTTLLYKPI 270          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: AAKB1_HUMAN (5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens OX=9606 GN=PRKAB1 PE=1 SV=4)

HSP 1 Score: 56.225 bits (134), Expect = 5.125e-9
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 3
Query:  177 EDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPV 404
            E+  R PP  P HL   +L+           LP P +V+LNHLY  + +    V+ L  THR++ KYVT +LYKP+
Sbjct:  197 EERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKD--GVMVLSATHRYKKKYVTTLLYKPI 270          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: AAKB1_RAT (5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Prkab1 PE=1 SV=4)

HSP 1 Score: 55.0694 bits (131), Expect = 1.340e-8
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 3
Query:  177 EDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPV 404
            E+  + PP  P HL   +L+           LP P +V+LNHLY  + +    V+ L  THR++ KYVT +LYKP+
Sbjct:  197 EERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKD--GVMVLSATHRYKKKYVTTLLYKPI 270          
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Match: AAKB1_MOUSE (5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus OX=10090 GN=Prkab1 PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 1.524e-8
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 3
Query:  177 EDEAREPPFAPFHLQHTLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSKYVTVVLYKPV 404
            E+  + PP  P HL   +L+           LP P +V+LNHLY  + +    V+ L  THR++ KYVT +LYKP+
Sbjct:  197 EERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKD--GVMVLSATHRYKKKYVTTLLYKPI 270          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23606 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
KINB3_ARATH1.153e-4065.09SNF1-related protein kinase regulatory subunit bet... [more]
KINB2_ARATH2.543e-3251.69SNF1-related protein kinase regulatory subunit bet... [more]
KINB1_ARATH6.667e-2147.00SNF1-related protein kinase regulatory subunit bet... [more]
AAKB2_RAT3.758e-1040.795'-AMP-activated protein kinase subunit beta-2 OS=... [more]
AAKB2_HUMAN6.290e-1040.795'-AMP-activated protein kinase subunit beta-2 OS=... [more]
AAKB2_MOUSE6.508e-1040.795'-AMP-activated protein kinase subunit beta-2 OS=... [more]
AAKB1_PONAB5.075e-939.475'-AMP-activated protein kinase subunit beta-1 OS=... [more]
AAKB1_HUMAN5.125e-939.475'-AMP-activated protein kinase subunit beta-1 OS=... [more]
AAKB1_RAT1.340e-838.165'-AMP-activated protein kinase subunit beta-1 OS=... [more]
AAKB1_MOUSE1.524e-838.165'-AMP-activated protein kinase subunit beta-1 OS=... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006828Association with the SNF1 complex (ASC) domainSMARTSM01010AMPKBI_2coord: 20..110
e-value: 5.8E-25
score: 98.9
IPR006828Association with the SNF1 complex (ASC) domainPFAMPF04739AMPKBIcoord: 38..109
e-value: 1.2E-21
score: 76.7
NoneNo IPR availableGENE3D3.30.160.760coord: 24..110
e-value: 2.9E-24
score: 86.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR037256ASC domain superfamilySUPERFAMILY160219AMPKBI-likecoord: 13..110

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_23606_La_Tanjil_v1.0 ID=rna-TanjilR_23606_La_Tanjil_v1.0; Name=rna-TanjilR_23606; organism=Lupinus angustifolius; type=mRNA; length=416bp
ATGAGCAATTCTCACACTGAAAATCTTGTAAGTGATTGATTCTTCACAAG
TACACAAATTATTTGTCAGTAGTTGGTCTAAAAGATACAATTCATTCACA
GGAAGAACCAACTGTTGTGGGATTTGAAGTTCCCAAGTCTCCTGATTCTA
GTTACAATAATGTGTACACTGGACATGAAGACGAGGCACGTGAACCACCT
TTTGCCCCCTTCCATTTGCAACACACCTTGCTCAGTTATCCTGCTAATAG
TGGGGATAGTTCAGGAAGTCTTCCATTGCCTCAGAATGTGATTCTAAACC
ATCTCTATATTGAGAATAGAGAGTCTTCAAGATCTGTTGTTGCATTAGGA
TATACCCATCGCTTCCGTTCTAAATATGTTACTGTCGTCCTTTACAAACC
AGTCCAAAGAAGTTGA
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protein sequence of rna-TanjilR_23606_La_Tanjil_v1.0

>rna-TanjilR_23606_La_Tanjil_v1.0 ID=rna-TanjilR_23606_La_Tanjil_v1.0; Name=rna-TanjilR_23606_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=113bp
MSNSHTENLEEPTVVGFEVPKSPDSSYNNVYTGHEDEAREPPFAPFHLQH
TLLSYPANSGDSSGSLPLPQNVILNHLYIENRESSRSVVALGYTHRFRSK
YVTVVLYKPVQRS
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mRNA from alignment at Chr_LG08-CM007368.1:23477915..23478330-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_23606_La_Tanjil_v1.0 ID=rna-TanjilR_23606_La_Tanjil_v1.0; Name=rna-TanjilR_23606; organism=Lupinus angustifolius; type=mRNA; length=416bp; location=Sequence derived from: Chr_LG08-CM007368.1:23477915..23478330- (Lupinus angustifolius
ATGAGCAATTCTCACACTGAAAATCTTGTAAGTGATTGATTCTTCACAAG TACACAAATTATTTGTCAGTAGTTGGTCTAAAAGATACAATTCATTCACA GGAAGAACCAACTGTTGTGGGATTTGAAGTTCCCAAGTCTCCTGATTCTA GTTACAATAATGTGTACACTGGACATGAAGACGAGGCACGTGAACCACCT TTTGCCCCCTTCCATTTGCAACACACCTTGCTCAGTTATCCTGCTAATAG TGGGGATAGTTCAGGAAGTCTTCCATTGCCTCAGAATGTGATTCTAAACC ATCTCTATATTGAGAATAGAGAGTCTTCAAGATCTGTTGTTGCATTAGGA TATACCCATCGCTTCCGTTCTAAATATGTTACTGTCGTCCTTTACAAACC AGTCCAAAGAAGTTGA
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Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:23477915..23478330-

>rna-TanjilR_23606_La_Tanjil_v1.0 ID=rna-TanjilR_23606_La_Tanjil_v1.0; Name=rna-TanjilR_23606; organism=Lupinus angustifolius; type=CDS; length=342bp; location=Sequence derived from: Chr_LG08-CM007368.1:23477915..23478330- (Lupinus angustifolius
ATGAGCAATTCTCACACTGAAAATCTTGAAGAACCAACTGTTGTGGGATT
TGAAGTTCCCAAGTCTCCTGATTCTAGTTACAATAATGTGTACACTGGAC
ATGAAGACGAGGCACGTGAACCACCTTTTGCCCCCTTCCATTTGCAACAC
ACCTTGCTCAGTTATCCTGCTAATAGTGGGGATAGTTCAGGAAGTCTTCC
ATTGCCTCAGAATGTGATTCTAAACCATCTCTATATTGAGAATAGAGAGT
CTTCAAGATCTGTTGTTGCATTAGGATATACCCATCGCTTCCGTTCTAAA
TATGTTACTGTCGTCCTTTACAAACCAGTCCAAAGAAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006828ASC_dom
IPR037256ASC_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding