rna-TanjilR_23583

Transcript Overview
Namerna-TanjilR_23583
Unique Namerna-TanjilR_23583_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1576
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG08-CM007368.1supercontigChr_LG08-CM007368.1:23695967..23697542 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL122Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL254Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL543Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL591Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1264Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1339Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1443Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1454Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1093Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1116Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1132Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1146Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1288Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1306Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1333Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1339Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1355Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0949Pisum sativum Cameor genome v1aPisum sativum
anpsR0964Pisum sativum Cameor genome v1aPisum sativum
anpsR0973Pisum sativum Cameor genome v1aPisum sativum
anpsR0979Pisum sativum Cameor genome v1aPisum sativum
anpvR1275Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1302Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1084Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1110Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1202Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR1274Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1087Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1107Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1118Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1111Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1103Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1175Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR1179Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1163Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR1165Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1187Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1174Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1072Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1089Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1036Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1065Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1206Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1231Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1240Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1264Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1286Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0999Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR1045Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1216Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1063Cicer arietinum
ancarR1097Cicer arietinum
ancarR1105Cicer arietinum
anccaR1056Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1080Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1224Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1271Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1276Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1283Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1148Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1165Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1186Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1261Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1266Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1275Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1283Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1275Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1295Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR1045Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1072Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1313Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1340Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan05g180900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg1465.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan08g153900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat07G0610900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat5g277680.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.07G059700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun05g249900.5Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-KK1_010100Cajanus cajan Asha genome v1.0Cajanus cajan
Vigst.07G044800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_07G00479.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058915140.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Hedin2.R1.6g030080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr11.465Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058879026.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.06G187700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat05G0768000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.005G136300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_022119Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014640943.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014663191.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg32143.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr05.2354.1.62113179Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.6g023640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun11g145800.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_04G02364.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_23636.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_004505912.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun11g145800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr05.1000999Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg43669.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg9324.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr11.1378.1.6211316fVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.1g028880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun05g249900.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_14587Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_09391.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Psat06G0191700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.011G074100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va08G063050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_17124Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.1g042120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigst.04G210600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058924109.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_06G01252.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat7g224080.1Pisum sativum Cameor genome v1aPisum sativum
Cr_17454.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va05G050150.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.06G163300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_30210Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_17148Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_04302Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_23583gene-TanjilG_23583_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23583rna-TanjilR_23583_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_23583_La_Tanjil_v1.0rna-TanjilR_23583_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23583_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23697184..23697542rna-TanjilR_23583_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23697184..23697542Lupinus angustifoliusCDS
rna-TanjilR_23583_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23695967..23696897rna-TanjilR_23583_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23695967..23696897Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23583_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23697184..23697542rna-TanjilR_23583_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23697184..23697542Lupinus angustifoliusexon
rna-TanjilR_23583_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23695967..23696897rna-TanjilR_23583_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:23695967..23696897Lupinus angustifoliusexon


Homology
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD13_ARATH (Protein indeterminate-domain 13 OS=Arabidopsis thaliana OX=3702 GN=IDD13 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.215e-71
Identity = 104/120 (86.67%), Postives = 115/120 (95.83%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            MATNRF CEICNKGFQREQNLQLH+RGHNLPWKLKQ+ N +QV+KKVY+CPEKSCVHHDP RALGDLTGIKKH+SRKHGEKKWKC+KCS+KYAV SDWKAHNKICG+RE++CDCGTLFSR
Sbjct:   59 MATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCDCGTLFSR 178
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD9_ARATH (Zinc finger protein BALDIBIS OS=Arabidopsis thaliana OX=3702 GN=BIB PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.513e-70
Identity = 102/120 (85.00%), Postives = 115/120 (95.83%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            M TNRFICE+CNKGF+R+QNLQLHRRGHNLPWKLKQR N +QV+KKVY+CPEK+CVHHDP RALGDLTGIKKH+SRKHGEKKWKC+KCS+KYAV SDWKAH+KICGT+EY+CDCGTLFSR
Sbjct:   63 MTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSR 182
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD2_ARATH (Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=GAF1 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.154e-69
Identity = 102/120 (85.00%), Postives = 115/120 (95.83%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            +ATNRF+CEICNKGFQR+QNLQLHRRGHNLPWKL+Q+ +N +V+KKVYVCPE SCVHHDP RALGDLTGIKKH+ RKHGEKKWKC+KCS+KYAVQSDWKAH+KICGT+EYKCDCGTLFSR
Sbjct:   58 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQK-SNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSR 176
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD7_ARATH (Protein indeterminate-domain 7 OS=Arabidopsis thaliana OX=3702 GN=IDD7 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.630e-69
Identity = 104/120 (86.67%), Postives = 110/120 (91.67%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            MATNRFICE+CNKGFQR+QNLQLH+RGHNLPWKLKQR N D VRKKVYVCPE  CVHH P RALGDLTGIKKH+ RKHGEKKWKCEKCS+KYAVQSDWKAH K CGT+EYKCDCGTLFSR
Sbjct:   87 MATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCDCGTLFSR 206
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD10_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana OX=3702 GN=JKD PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 4.056e-69
Identity = 103/120 (85.83%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            MATNRF+CEICNKGFQR+QNLQLHRRGHNLPWKLKQR   + ++KKVY+CP K+CVHHD  RALGDLTGIKKHYSRKHGEKKWKCEKCS+KYAVQSDWKAH K CGTREYKCDCGTLFSR
Sbjct:   77 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD1_ARATH (Zinc finger protein ENHYDROUS OS=Arabidopsis thaliana OX=3702 GN=ENY PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 8.567e-69
Identity = 103/120 (85.83%), Postives = 112/120 (93.33%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            MATNRF+CEICNKGFQR+QNLQLHRRGHNLPWKL+QR +  +VRKKVYVCP   CVHHDP RALGDLTGIKKH+ RKHGEKKWKCEKCS+KYAVQSDWKAH+KICGT+EYKCDCGTLFSR
Sbjct:   56 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR-STKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSR 174
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD6_ARATH (Protein indeterminate-domain 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IDD6 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.080e-67
Identity = 100/120 (83.33%), Postives = 113/120 (94.17%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            MATNRF+CE+CNKGFQREQNLQLHRRGHNLPWKLKQ+ N  +VR+KVY+CPE SCVHHDP RALGDLTGIKKHY RKHGEKKWKC+KCS++YAVQSDWKAH+K CGT+EY+CDCGT+FSR
Sbjct:   77 MATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSN-KEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 195
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD11_ARATH (Protein indeterminate-domain 11 OS=Arabidopsis thaliana OX=3702 GN=IDD11 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.811e-67
Identity = 102/120 (85.00%), Postives = 112/120 (93.33%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            MATNRF+CEICNKGFQR+QNLQLHRRGHNLPWKLKQR N + +RKKVYVCPE SCVHHDP RALGDLTGIKKH+ RKHGEKKWKC+KCS+KYAVQSD KAH+K CGT+EY+CDCGTLFSR
Sbjct:   94 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKEYRCDCGTLFSR 213
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD4_ARATH (Protein indeterminate-domain 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IDD4 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.666e-66
Identity = 98/120 (81.67%), Postives = 112/120 (93.33%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            MATNRFIC++CNKGFQREQNLQLHRRGHNLPWKLKQ+    +V++KVY+CPE +CVHHDP RALGDLTGIKKHY RKHGEKKWKCEKCS++YAVQSDWKAH+K CGT+EY+CDCGT+FSR
Sbjct:   78 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKST-KEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 196
[Close]
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Match: IDD5_ARATH (Protein indeterminate-domain 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IDD5 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.405e-66
Identity = 100/120 (83.33%), Postives = 112/120 (93.33%), Query Frame = 1 
Query:    1 MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKAHNKICGTREYKCDCGTLFSR 360
            MATNRFICE+CNKGFQREQNLQLHRRGHNLPWKLKQ+    +V++KVY+CPE SCVHHDP RALGDLTGIKKHY RKHGEKKWKC+KCS++YAVQSDWKAH+K CGT+EY+CDCGTLFSR
Sbjct:   76 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKST-KEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTLFSR 194
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23583 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
IDD13_ARATH1.215e-7186.67Protein indeterminate-domain 13 OS=Arabidopsis tha... [more]
IDD9_ARATH3.513e-7085.00Zinc finger protein BALDIBIS OS=Arabidopsis thalia... [more]
IDD2_ARATH3.154e-6985.00Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Ara... [more]
IDD7_ARATH3.630e-6986.67Protein indeterminate-domain 7 OS=Arabidopsis thal... [more]
IDD10_ARATH4.056e-6985.83Zinc finger protein JACKDAW OS=Arabidopsis thalian... [more]
IDD1_ARATH8.567e-6985.83Zinc finger protein ENHYDROUS OS=Arabidopsis thali... [more]
IDD6_ARATH1.080e-6783.33Protein indeterminate-domain 6, chloroplastic OS=A... [more]
IDD11_ARATH3.811e-6785.00Protein indeterminate-domain 11 OS=Arabidopsis tha... [more]
IDD4_ARATH2.666e-6681.67Protein indeterminate-domain 4, chloroplastic OS=A... [more]
IDD5_ARATH4.405e-6683.33Protein indeterminate-domain 5, chloroplastic OS=A... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 6..28
e-value: 0.0044
score: 26.3
coord: 83..103
e-value: 200.0
score: 1.8
coord: 48..78
e-value: 140.0
score: 3.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 8..28
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 6..28
score: 10.97
NoneNo IPR availableGENE3D3.30.160.60coord: 40..131
e-value: 9.1E-7
score: 30.9
NoneNo IPR availableGENE3D3.30.160.60coord: 2..29
e-value: 1.5E-5
score: 26.7
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 6..28
e-value: 1.7E-5
score: 25.0
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 5..103

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_23583_La_Tanjil_v1.0 ID=rna-TanjilR_23583_La_Tanjil_v1.0; Name=rna-TanjilR_23583; organism=Lupinus angustifolius; type=mRNA; length=1576bp
ATGGCAACGAACCGATTCATCTGTGAAATATGCAATAAGGGTTTCCAGAG
AGAACAAAACTTACAGCTGCATCGGCGAGGGCATAACCTACCATGGAAGC
TGAAGCAGAGAGAAAACAATGATCAAGTGAGGAAGAAGGTTTATGTGTGC
CCGGAGAAGAGTTGTGTGCACCATGACCCTTGTAGAGCACTAGGAGATTT
AACAGGAATAAAGAAACACTATAGCAGAAAGCATGGGGAGAAGAAGTGGA
AGTGTGAAAAGTGCTCTAGAAAATATGCAGTTCAATCAGATTGGAAGGCC
CATAACAAGATTTGTGGGACTAGAGAGTACAAATGTGACTGTGGCACACT
TTTCTCCAGGTTAGGATTTTAGACATACATATATATGGATCAACTTCGAG
TCCTATTAATTAATCTTTCATCTTATACACACTTCCAGGATCTGCACAAT
TTAATGTGAAATTAAATATCACATGTTCTTTGTTCATTGACTAAACTTTA
ATGCATGCTATATATTAATGATACCAAATATCATATTAATTAGTATGTGG
AATGAGTCATTGAGAGAATATTTGTGTGGAGTAATAAATGATGGTAGTTA
AATTATATATTGATGTTCATTTATTATATATACGATGAAAATCAGGAAGG
ACAGTTTCATAACACACAGAGCCTTTTGTGATGCATTGACTGAAGAAAGT
GTGAGAGTTCCTGGAGCTTTAAGTAACTTGAGAAGGGATATTCATTTGAT
CAATAATAGTACTACTCAAGTACCCAGAATCCCTCAGATTTTTCCAAGAT
TTCATTCAGGACTTGATGGTAATTCAGTTTCAGAACCATTGGAGTTCAAT
TATGCCAACAACTCTCAGCTTCAATGCTTCCCAAGAAAATTGAGTGCTTT
CTCATCTAATGTAAACTCTGTTGCCTGCAACAACATGCCTGATTTAGTGG
AAACAATGAACATGTTTGGGTCACCACCTCAACAAGAAACTCAGTGGCTG
ATGAATTACCGAGCATCATTCACAAGTGCTAATAACAACAACCTATCTAT
ACCATTGCCTGCACAACTGCCACATGGCCTGAAGCAAGAACAAGAAGAAA
ACAAACAAGACTTGTCTTATATTACTGCAAACTCTGTGTACTTCAATAAT
CAGAATTCACAAGGTGGAGGAGGAGGCCCAACTCACATGTCAGCAGCAAT
ATCACTGTTACATAAAGATAATGCATCATCCACCTTCGACAACAACAACC
ATAATGTCTTTGGCATGATTGGTTTTTCAGGGAAGGTGAATAATAATAAC
ACTGTTGAGGTTCAGAAGTTTTTCAAGGAAGGAAACTTGAATCATGATCA
GTTGGTGAGTTTAGAAGATGGTAGCACCAACCTTGGAGCTAGTGGGTTTT
CAATGAATGACTCAAGCTCAAATAATAATAAAGACCAGTTTGGTTTAACA
AGAGACTTTTTGGGTGTTGGAGATGAGTCAATAACAATAAGCAGGCCCTT
TGATTTGACTGAGTTTAATGCAATAGGATCAGTCATGGATCTGCAAAGCA
GCCACTATGGTGGACATTACTGCTAG
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protein sequence of rna-TanjilR_23583_La_Tanjil_v1.0

>rna-TanjilR_23583_La_Tanjil_v1.0 ID=rna-TanjilR_23583_La_Tanjil_v1.0; Name=rna-TanjilR_23583_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=429bp
MATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRENNDQVRKKVYVC
PEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCEKCSRKYAVQSDWKA
HNKICGTREYKCDCGTLFSRKDSFITHRAFCDALTEESVRVPGALSNLRR
DIHLINNSTTQVPRIPQIFPRFHSGLDGNSVSEPLEFNYANNSQLQCFPR
KLSAFSSNVNSVACNNMPDLVETMNMFGSPPQQETQWLMNYRASFTSANN
NNLSIPLPAQLPHGLKQEQEENKQDLSYITANSVYFNNQNSQGGGGGPTH
MSAAISLLHKDNASSTFDNNNHNVFGMIGFSGKVNNNNTVEVQKFFKEGN
LNHDQLVSLEDGSTNLGASGFSMNDSSSNNNKDQFGLTRDFLGVGDESIT
ISRPFDLTEFNAIGSVMDLQSSHYGGHYC
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mRNA from alignment at Chr_LG08-CM007368.1:23695967..23697542-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_23583_La_Tanjil_v1.0 ID=rna-TanjilR_23583_La_Tanjil_v1.0; Name=rna-TanjilR_23583; organism=Lupinus angustifolius; type=mRNA; length=1576bp; location=Sequence derived from: Chr_LG08-CM007368.1:23695967..23697542- (Lupinus angustifolius
ATGGCAACGAACCGATTCATCTGTGAAATATGCAATAAGGGTTTCCAGAG
AGAACAAAACTTACAGCTGCATCGGCGAGGGCATAACCTACCATGGAAGC
TGAAGCAGAGAGAAAACAATGATCAAGTGAGGAAGAAGGTTTATGTGTGC
CCGGAGAAGAGTTGTGTGCACCATGACCCTTGTAGAGCACTAGGAGATTT
AACAGGAATAAAGAAACACTATAGCAGAAAGCATGGGGAGAAGAAGTGGA
AGTGTGAAAAGTGCTCTAGAAAATATGCAGTTCAATCAGATTGGAAGGCC
CATAACAAGATTTGTGGGACTAGAGAGTACAAATGTGACTGTGGCACACT
TTTCTCCAGGTTAGGATTTTAGACATACATATATATGGATCAACTTCGAG
TCCTATTAATTAATCTTTCATCTTATACACACTTCCAGGATCTGCACAAT
TTAATGTGAAATTAAATATCACATGTTCTTTGTTCATTGACTAAACTTTA
ATGCATGCTATATATTAATGATACCAAATATCATATTAATTAGTATGTGG
AATGAGTCATTGAGAGAATATTTGTGTGGAGTAATAAATGATGGTAGTTA
AATTATATATTGATGTTCATTTATTATATATACGATGAAAATCAGGAAGG
ACAGTTTCATAACACACAGAGCCTTTTGTGATGCATTGACTGAAGAAAGT
GTGAGAGTTCCTGGAGCTTTAAGTAACTTGAGAAGGGATATTCATTTGAT
CAATAATAGTACTACTCAAGTACCCAGAATCCCTCAGATTTTTCCAAGAT
TTCATTCAGGACTTGATGGTAATTCAGTTTCAGAACCATTGGAGTTCAAT
TATGCCAACAACTCTCAGCTTCAATGCTTCCCAAGAAAATTGAGTGCTTT
CTCATCTAATGTAAACTCTGTTGCCTGCAACAACATGCCTGATTTAGTGG
AAACAATGAACATGTTTGGGTCACCACCTCAACAAGAAACTCAGTGGCTG
ATGAATTACCGAGCATCATTCACAAGTGCTAATAACAACAACCTATCTAT
ACCATTGCCTGCACAACTGCCACATGGCCTGAAGCAAGAACAAGAAGAAA
ACAAACAAGACTTGTCTTATATTACTGCAAACTCTGTGTACTTCAATAAT
CAGAATTCACAAGGTGGAGGAGGAGGCCCAACTCACATGTCAGCAGCAAT
ATCACTGTTACATAAAGATAATGCATCATCCACCTTCGACAACAACAACC
ATAATGTCTTTGGCATGATTGGTTTTTCAGGGAAGGTGAATAATAATAAC
ACTGTTGAGGTTCAGAAGTTTTTCAAGGAAGGAAACTTGAATCATGATCA
GTTGGTGAGTTTAGAAGATGGTAGCACCAACCTTGGAGCTAGTGGGTTTT
CAATGAATGACTCAAGCTCAAATAATAATAAAGACCAGTTTGGTTTAACA
AGAGACTTTTTGGGTGTTGGAGATGAGTCAATAACAATAAGCAGGCCCTT
TGATTTGACTGAGTTTAATGCAATAGGATCAGTCATGGATCTGCAAAGCA
GCCACTATGGTGGACATTACTGCTAG
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Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:23695967..23697542-

>rna-TanjilR_23583_La_Tanjil_v1.0 ID=rna-TanjilR_23583_La_Tanjil_v1.0; Name=rna-TanjilR_23583; organism=Lupinus angustifolius; type=CDS; length=1290bp; location=Sequence derived from: Chr_LG08-CM007368.1:23695967..23697542- (Lupinus angustifolius
ATGGCAACGAACCGATTCATCTGTGAAATATGCAATAAGGGTTTCCAGAG
AGAACAAAACTTACAGCTGCATCGGCGAGGGCATAACCTACCATGGAAGC
TGAAGCAGAGAGAAAACAATGATCAAGTGAGGAAGAAGGTTTATGTGTGC
CCGGAGAAGAGTTGTGTGCACCATGACCCTTGTAGAGCACTAGGAGATTT
AACAGGAATAAAGAAACACTATAGCAGAAAGCATGGGGAGAAGAAGTGGA
AGTGTGAAAAGTGCTCTAGAAAATATGCAGTTCAATCAGATTGGAAGGCC
CATAACAAGATTTGTGGGACTAGAGAGTACAAATGTGACTGTGGCACACT
TTTCTCCAGGAAGGACAGTTTCATAACACACAGAGCCTTTTGTGATGCAT
TGACTGAAGAAAGTGTGAGAGTTCCTGGAGCTTTAAGTAACTTGAGAAGG
GATATTCATTTGATCAATAATAGTACTACTCAAGTACCCAGAATCCCTCA
GATTTTTCCAAGATTTCATTCAGGACTTGATGGTAATTCAGTTTCAGAAC
CATTGGAGTTCAATTATGCCAACAACTCTCAGCTTCAATGCTTCCCAAGA
AAATTGAGTGCTTTCTCATCTAATGTAAACTCTGTTGCCTGCAACAACAT
GCCTGATTTAGTGGAAACAATGAACATGTTTGGGTCACCACCTCAACAAG
AAACTCAGTGGCTGATGAATTACCGAGCATCATTCACAAGTGCTAATAAC
AACAACCTATCTATACCATTGCCTGCACAACTGCCACATGGCCTGAAGCA
AGAACAAGAAGAAAACAAACAAGACTTGTCTTATATTACTGCAAACTCTG
TGTACTTCAATAATCAGAATTCACAAGGTGGAGGAGGAGGCCCAACTCAC
ATGTCAGCAGCAATATCACTGTTACATAAAGATAATGCATCATCCACCTT
CGACAACAACAACCATAATGTCTTTGGCATGATTGGTTTTTCAGGGAAGG
TGAATAATAATAACACTGTTGAGGTTCAGAAGTTTTTCAAGGAAGGAAAC
TTGAATCATGATCAGTTGGTGAGTTTAGAAGATGGTAGCACCAACCTTGG
AGCTAGTGGGTTTTCAATGAATGACTCAAGCTCAAATAATAATAAAGACC
AGTTTGGTTTAACAAGAGACTTTTTGGGTGTTGGAGATGAGTCAATAACA
ATAAGCAGGCCCTTTGATTTGACTGAGTTTAATGCAATAGGATCAGTCAT
GGATCTGCAAAGCAGCCACTATGGTGGACATTACTGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR022755Znf_C2H2_jaz
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding