rna-TanjilR_23551
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS5_ARATH (UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 5.891e-41 Identity = 53/61 (86.89%), Postives = 59/61 (96.72%), Query Frame = 2
Query: 3431 QLINPDIEIKIVENTPDDPRQRKPDITKAKELLGWEPQVKLRDGLPLMEQDFRLRLGVHKK 3613
+LINP IEIK+VENTPDDPRQRKPDITKAKE+LGWEP+VKLR+GLPLME+DFRLRLGVHK
Sbjct: 281 ELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGLPLMEEDFRLRLGVHKN 341 HSP 2 Score: 50.0618 bits (118), Expect = 5.891e-41 Identity = 24/46 (52.17%), Postives = 28/46 (60.87%), Query Frame = 2
Query: 2933 SPHF*IDSISSLHHFSHDCWCFSGESLTVQSPGTQTRSFCYVSDLV 3070
P ID + +F GE+LTVQ PGTQTRSFCYVSD+V
Sbjct: 204 GPRMNIDDGRVVSNFI--AQALRGEALTVQKPGTQTRSFCYVSDMV 247 HSP 3 Score: 46.9802 bits (110), Expect = 5.891e-41 Identity = 29/69 (42.03%), Postives = 33/69 (47.83%), Query Frame = 3
Query: 3156 VDGLILLMGGSDTGPINLGNPG*ISMTIFTFLN*MKICLLSLSLFTCVYLSGEFTMLELAENVKEVS*P 3362
VDGL+ LM G DTGPIN+GNP GEFTM+ELAE VKE+ P
Sbjct: 247 VDGLMRLMEGDDTGPINIGNP------------------------------GEFTMVELAETVKELINP 285 HSP 4 Score: 69.707 bits (169), Expect = 9.110e-23 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 1
Query: 2662 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR
Sbjct: 192 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 224 HSP 5 Score: 61.6178 bits (148), Expect = 9.110e-23 Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 2
Query: 2477 GVRSCYDEGKRVAETLMFDYHRQHGL 2554
GVRSCYDEGKRVAETLMFDYHRQHG+
Sbjct: 167 GVRSCYDEGKRVAETLMFDYHRQHGI 192 HSP 6 Score: 97.0561 bits (240), Expect = 4.006e-20 Identity = 69/168 (41.07%), Postives = 86/168 (51.19%), Query Frame = 3
Query: 2034 NLMCMEITIF------QTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCFYRSQSQPISGASLSATVIICY-*DLGFQLSGDISRIYFIYTMFMKI*SKHLTIYS*QEFVAAMMKGNV 2510
+L C IF +TIKTNVIGTLNMLGLAKRVGAR ILLTSTSEVYGDPL+HPQPESYWGNVNPIG +C+ G ++ T++ Y G ++ I+RI+ Y M I + F+A ++G
Sbjct: 99 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--------------------------ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYD-------EGKRVAETLMFDYHRQHGIEIR--IARIFNTYGPRMNIDDGRVV----SNFIAQALRGEA 227 HSP 7 Score: 69.3218 bits (168), Expect = 5.063e-11 Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 1240 N*VIVADNYFTGSKDNLKKWIGHPRFELIRHGIFTSVLKPLCMLY 1374
N VIVADNYFTGSKDNLKKWIGHPRFELIRH + +L + +Y
Sbjct: 54 NEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIY 98 HSP 8 Score: 67.3958 bits (163), Expect = 2.011e-10 Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 2
Query: 1697 DVTEPLWIEVDQIYHLACPASPIFYKYNPVK 1789
DVTEPL IEVDQIYHLACPASPIFYKYNPVK
Sbjct: 85 DVTEPLLIEVDQIYHLACPASPIFYKYNPVK 115 HSP 9 Score: 62.7734 bits (151), Expect = 6.899e-9 Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1
Query: 985 QSNMRILVTGGAGFIGSHLVDRLMENEKNEV 1077
QSNMRIL++GGAGFIGSHLVD+LMENEKNEV
Sbjct: 26 QSNMRILISGGAGFIGSHLVDKLMENEKNEV 56
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS3_ARATH (UDP-glucuronic acid decarboxylase 3 OS=Arabidopsis thaliana OX=3702 GN=UXS3 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.271e-39 Identity = 49/58 (84.48%), Postives = 56/58 (96.55%), Query Frame = 2
Query: 3431 QLINPDIEIKIVENTPDDPRQRKPDITKAKELLGWEPQVKLRDGLPLMEQDFRLRLGV 3604
+LINP IEIK+VENTPDDPRQRKPDI+KAKE+LGWEP+VKLR+GLPLME+DFRLRL V
Sbjct: 282 ELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRLNV 339 HSP 2 Score: 50.447 bits (119), Expect = 9.271e-39 Identity = 24/46 (52.17%), Postives = 28/46 (60.87%), Query Frame = 2
Query: 2933 SPHF*IDSISSLHHFSHDCWCFSGESLTVQSPGTQTRSFCYVSDLV 3070
P ID + +F GE+LTVQ PGTQTRSFCYVSD+V
Sbjct: 205 GPRMNIDDGRVVSNFI--AQALRGEALTVQKPGTQTRSFCYVSDMV 248 HSP 3 Score: 48.1358 bits (113), Expect = 9.271e-39 Identity = 30/69 (43.48%), Postives = 34/69 (49.28%), Query Frame = 3
Query: 3156 VDGLILLMGGSDTGPINLGNPG*ISMTIFTFLN*MKICLLSLSLFTCVYLSGEFTMLELAENVKEVS*P 3362
VDGLI LM G+DTGPIN+GNP GEFTM+ELAE VKE+ P
Sbjct: 248 VDGLIRLMEGNDTGPINIGNP------------------------------GEFTMVELAETVKELINP 286 HSP 4 Score: 69.707 bits (169), Expect = 8.052e-23 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 1
Query: 2662 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR
Sbjct: 193 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 225 HSP 5 Score: 61.6178 bits (148), Expect = 8.052e-23 Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 2
Query: 2477 GVRSCYDEGKRVAETLMFDYHRQHGL 2554
GVRSCYDEGKRVAETLMFDYHRQHG+
Sbjct: 168 GVRSCYDEGKRVAETLMFDYHRQHGI 193 HSP 6 Score: 97.0561 bits (240), Expect = 3.286e-20 Identity = 68/167 (40.72%), Postives = 84/167 (50.30%), Query Frame = 3
Query: 2034 NLMCMEITIF------QTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCFYRSQSQPISGASLSATVIICY*DLGFQLSGDISRIYFIYTMFMKI*SKHLTIYS*QEFVAAMMKGNV 2510
+L C IF +TIKTNVIGTLNMLGLAKRVGAR ILLTSTSEVYGDPL+HPQPESYWGNVNPIG +C+ G ++ T++ Y + I+RI+ Y M I + F+A ++G
Sbjct: 100 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--------------------------ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYD-------EGKRVAETLMFDY-HRQHGIEIRIARIFNTYGPRMNIDDGRVV----SNFIAQALRGEA 228 HSP 7 Score: 66.6254 bits (161), Expect = 3.703e-10 Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 1240 N*VIVADNYFTGSKDNLKKWIGHPRFELIRHGIFTSVLKPLCMLY 1374
N V+VADNYFTGSK+NLKKWIGHPRFELIRH + +L + +Y
Sbjct: 55 NEVVVADNYFTGSKENLKKWIGHPRFELIRHDVTEPLLIEVDRIY 99 HSP 8 Score: 65.855 bits (159), Expect = 6.349e-10 Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 2
Query: 1697 DVTEPLWIEVDQIYHLACPASPIFYKYNPVK 1789
DVTEPL IEVD+IYHLACPASPIFYKYNPVK
Sbjct: 86 DVTEPLLIEVDRIYHLACPASPIFYKYNPVK 116 HSP 9 Score: 60.8474 bits (146), Expect = 2.650e-8 Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 1
Query: 985 QSNMRILVTGGAGFIGSHLVDRLMENEKNEV 1077
Q NMRIL++GGAGFIGSHLVD+LMENEKNEV
Sbjct: 27 QPNMRILISGGAGFIGSHLVDKLMENEKNEV 57
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS6_ARATH (UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.582e-38 Identity = 51/61 (83.61%), Postives = 59/61 (96.72%), Query Frame = 2
Query: 3431 QLINPDIEIKIVENTPDDPRQRKPDITKAKELLGWEPQVKLRDGLPLMEQDFRLRLGVHKK 3613
+LI PD+EIK+VENTPDDPRQRKPDI+KAKE+LGWEP+VKLR+GLPLME+DFRLRLGV KK
Sbjct: 283 ELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRLGVPKK 343 HSP 2 Score: 50.447 bits (119), Expect = 2.582e-38 Identity = 24/46 (52.17%), Postives = 28/46 (60.87%), Query Frame = 2
Query: 2933 SPHF*IDSISSLHHFSHDCWCFSGESLTVQSPGTQTRSFCYVSDLV 3070
P ID + +F GE+LTVQ PGTQTRSFCYVSD+V
Sbjct: 206 GPRMNIDDGRVVSNFI--AQALRGEALTVQKPGTQTRSFCYVSDMV 249 HSP 3 Score: 42.743 bits (99), Expect = 2.582e-38 Identity = 27/69 (39.13%), Postives = 32/69 (46.38%), Query Frame = 3
Query: 3156 VDGLILLMGGSDTGPINLGNPG*ISMTIFTFLN*MKICLLSLSLFTCVYLSGEFTMLELAENVKEVS*P 3362
V+GL+ LM G TGPIN+GNP GEFTM+ELAE VKE+ P
Sbjct: 249 VEGLMRLMEGDQTGPINIGNP------------------------------GEFTMVELAETVKELIKP 287 HSP 4 Score: 69.707 bits (169), Expect = 8.390e-23 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 1
Query: 2662 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR
Sbjct: 194 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 226 HSP 5 Score: 61.6178 bits (148), Expect = 8.390e-23 Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 2
Query: 2477 GVRSCYDEGKRVAETLMFDYHRQHGL 2554
GVRSCYDEGKRVAETLMFDYHRQHG+
Sbjct: 169 GVRSCYDEGKRVAETLMFDYHRQHGI 194 HSP 6 Score: 94.3597 bits (233), Expect = 3.240e-19 Identity = 69/168 (41.07%), Postives = 85/168 (50.60%), Query Frame = 3
Query: 2034 NLMCMEITIF------QTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCFYRSQSQPISGASLSATVIICY-*DLGFQLSGDISRIYFIYTMFMKI*SKHLTIYS*QEFVAAMMKGNV 2510
+L C IF +TIKTNVIGTLNMLGLAKRVGAR ILLTSTSEVYGDPLVHPQ ESYWGNVNPIG +C+ G ++ T++ Y G ++ I+RI+ Y M I + F+A ++G
Sbjct: 101 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--------------------------ILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYD-------EGKRVAETLMFDYHRQHGIEIR--IARIFNTYGPRMNIDDGRVV----SNFIAQALRGEA 229 HSP 7 Score: 68.1662 bits (165), Expect = 1.314e-10 Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 1240 N*VIVADNYFTGSKDNLKKWIGHPRFELIRHGIFTSVLKPLCMLY 1374
N VIVADNYFTGSKDNLKKWIGHPRFELIRH + + + +Y
Sbjct: 56 NEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQIY 100 HSP 8 Score: 68.1662 bits (165), Expect = 1.491e-10 Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 2
Query: 1697 DVTEPLWIEVDQIYHLACPASPIFYKYNPVK 1789
DVTEPL++EVDQIYHLACPASPIFYKYNPVK
Sbjct: 87 DVTEPLFVEVDQIYHLACPASPIFYKYNPVK 117 HSP 9 Score: 63.5438 bits (153), Expect = 4.676e-9 Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 1
Query: 985 QSNMRILVTGGAGFIGSHLVDRLMENEKNEV 1077
QSNMRILVTGGAGFIGSHLVD+LM+NEKNEV
Sbjct: 28 QSNMRILVTGGAGFIGSHLVDKLMQNEKNEV 58
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS4_ARATH (UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.635e-21 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 2
Query: 3413 LWLLFSQLINPDIEIKIVENTPDDPRQRKPDITKAKELLGWEPQVKLRDGLPLMEQDFRLRL 3598
L + + I+P+ +I+ NT DDP +RKPDITKAKELLGWEP+V LR GLPLM +DFR R+
Sbjct: 366 LAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRV 427 HSP 2 Score: 37.3502 bits (85), Expect = 1.635e-21 Identity = 26/72 (36.11%), Postives = 31/72 (43.06%), Query Frame = 3
Query: 3135 FSCDIS*VDGLILLMGGSDTGPINLGNPG*ISMTIFTFLN*MKICLLSLSLFTCVYLSGEFTMLELAENVKE 3350
F D+ V+GL+ LM G GP NLGNP GEFTMLELA+ V+E
Sbjct: 333 FVSDL--VEGLMRLMEGEHVGPFNLGNP------------------------------GEFTMLELAKVVQE 372 HSP 3 Score: 31.187 bits (69), Expect = 1.635e-21 Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 2
Query: 3005 ESLTVQSPGTQTRSFCYVSDLV 3070
E LTV G QTRSF +VSDLV
Sbjct: 317 EPLTVYGDGKQTRSFQFVSDLV 338 HSP 4 Score: 67.3958 bits (163), Expect = 5.777e-18 Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 1
Query: 2659 NIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
N+E+RIARIFNTYGPRM IDDGRVVSNF+AQALR
Sbjct: 282 NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALR 315 HSP 5 Score: 47.3654 bits (111), Expect = 5.777e-18 Identity = 19/22 (86.36%), Postives = 19/22 (86.36%), Query Frame = 2
Query: 2477 GVRSCYDEGKRVAETLMFDYHR 2542
GVRSCYDEGKR AETL DYHR
Sbjct: 258 GVRSCYDEGKRTAETLTMDYHR 279 HSP 6 Score: 88.1965 bits (217), Expect = 1.041e-16 Identity = 56/123 (45.53%), Postives = 67/123 (54.47%), Query Frame = 3
Query: 2064 QTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCFYRSQSQPISGASLSATVIICY*DLGFQLSGDISRIYFIY 2426
+TIKTNV+GTLNMLGLAKRVGAR LLTSTSEVYGDPL HPQ E+YWGNVNPIG +C+ G + T+ + Y G + I+RI+ Y
Sbjct: 206 KTIKTNVVGTLNMLGLAKRVGARF--------------------------LLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYD-------EGKRTAETLTMDY-HRGANVEVRIARIFNTY 294 HSP 7 Score: 60.4622 bits (145), Expect = 5.855e-8 Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 2
Query: 1697 DVTEPLWIEVDQIYHLACPASPIFYKYNPVK 1789
DV EP+ +EVDQIYHLACPASP+ YK+NPVK
Sbjct: 176 DVVEPILLEVDQIYHLACPASPVHYKFNPVK 206
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS2_ARATH (UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-21 Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 2
Query: 3413 LWLLFSQLINPDIEIKIVENTPDDPRQRKPDITKAKELLGWEPQVKLRDGLPLMEQDFRLRL 3598
L + + I+P+ I+ NT DDP +RKPDITKAKELLGWEP+V LR GLPLM +DFR R+
Sbjct: 364 LAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRV 425 HSP 2 Score: 37.3502 bits (85), Expect = 2.280e-21 Identity = 26/72 (36.11%), Postives = 31/72 (43.06%), Query Frame = 3
Query: 3135 FSCDIS*VDGLILLMGGSDTGPINLGNPG*ISMTIFTFLN*MKICLLSLSLFTCVYLSGEFTMLELAENVKE 3350
F D+ V+GL+ LM G GP NLGNP GEFTMLELA+ V+E
Sbjct: 331 FVSDL--VEGLMRLMEGEHVGPFNLGNP------------------------------GEFTMLELAKVVQE 370 HSP 3 Score: 30.8018 bits (68), Expect = 2.280e-21 Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 2
Query: 3005 ESLTVQSPGTQTRSFCYVSDLV 3070
E LTV G QTRSF +VSDLV
Sbjct: 315 EPLTVYGDGKQTRSFQFVSDLV 336 HSP 4 Score: 67.3958 bits (163), Expect = 6.374e-18 Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 1
Query: 2659 NIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
N+E+RIARIFNTYGPRM IDDGRVVSNF+AQALR
Sbjct: 280 NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALR 313 HSP 5 Score: 47.3654 bits (111), Expect = 6.374e-18 Identity = 19/22 (86.36%), Postives = 19/22 (86.36%), Query Frame = 2
Query: 2477 GVRSCYDEGKRVAETLMFDYHR 2542
GVRSCYDEGKR AETL DYHR
Sbjct: 256 GVRSCYDEGKRTAETLTMDYHR 277 HSP 6 Score: 87.8113 bits (216), Expect = 1.263e-16 Identity = 56/123 (45.53%), Postives = 67/123 (54.47%), Query Frame = 3
Query: 2064 QTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCFYRSQSQPISGASLSATVIICY*DLGFQLSGDISRIYFIY 2426
+TIKTNV+GTLNMLGLAKRVGAR LLTSTSEVYGDPL HPQ E+YWGNVNPIG +C+ G + T+ + Y G + I+RI+ Y
Sbjct: 204 KTIKTNVVGTLNMLGLAKRVGARF--------------------------LLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYD-------EGKRTAETLTMDY-HRGANVEVRIARIFNTY 292 HSP 7 Score: 60.4622 bits (145), Expect = 6.202e-8 Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 2
Query: 1697 DVTEPLWIEVDQIYHLACPASPIFYKYNPVK 1789
DV EP+ +EVDQIYHLACPASP+ YK+NPVK
Sbjct: 174 DVVEPILLEVDQIYHLACPASPVHYKFNPVK 204
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS1_ARATH (UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.562e-20 Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 2
Query: 3431 QLINPDIEIKIVENTPDDPRQRKPDITKAKELLGWEPQVKLRDGLPLMEQDFRLRL 3598
++I+P I+ NT DDP +RKPDI+KAKE L WEP++ LR+GLP M DFR R+
Sbjct: 371 EVIDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRNRI 426 HSP 2 Score: 40.0466 bits (92), Expect = 9.562e-20 Identity = 26/66 (39.39%), Postives = 28/66 (42.42%), Query Frame = 3
Query: 3156 VDGLILLMGGSDTGPINLGNPG*ISMTIFTFLN*MKICLLSLSLFTCVYLSGEFTMLELAENVKEV 3353
V+GL+ LM GP NLGNP GEFTMLELAE VKEV
Sbjct: 337 VEGLVALMENDHVGPFNLGNP------------------------------GEFTMLELAEVVKEV 372 HSP 3 Score: 30.8018 bits (68), Expect = 9.562e-20 Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query: 3011 LTVQSPGTQTRSFCYVSDLV 3070
+TV G QTRSF YVSDLV
Sbjct: 318 MTVYGDGKQTRSFQYVSDLV 337 HSP 4 Score: 88.1965 bits (217), Expect = 9.976e-17 Identity = 56/123 (45.53%), Postives = 67/123 (54.47%), Query Frame = 3
Query: 2064 QTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCFYRSQSQPISGASLSATVIICY*DLGFQLSGDISRIYFIY 2426
+TIKTNV+GTLNMLGLAKRVGAR LLTSTSEVYGDPL HPQ E+YWGNVNPIG +C+ G + T+ + Y G + I+RI+ Y
Sbjct: 205 KTIKTNVMGTLNMLGLAKRVGARF--------------------------LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYD-------EGKRTAETLAMDY-HRGAGVEVRIARIFNTY 293 HSP 5 Score: 62.3882 bits (150), Expect = 2.254e-16 Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 2662 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR*LHPF 2775
+E+RIARIFNTYGPRM +DDGRVVSNF+AQ +R HP
Sbjct: 282 VEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIR-KHPM 318 HSP 6 Score: 46.9802 bits (110), Expect = 2.254e-16 Identity = 19/26 (73.08%), Postives = 20/26 (76.92%), Query Frame = 2
Query: 2477 GVRSCYDEGKRVAETLMFDYHRQHGL 2554
G RSCYDEGKR AETL DYHR G+
Sbjct: 257 GERSCYDEGKRTAETLAMDYHRGAGV 282 HSP 7 Score: 62.7734 bits (151), Expect = 1.162e-8 Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 2
Query: 1697 DVTEPLWIEVDQIYHLACPASPIFYKYNPVK 1789
DV EP+ +EVDQIYHLACPASP+ YKYNPVK
Sbjct: 175 DVVEPILLEVDQIYHLACPASPVHYKYNPVK 205
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis OX=8364 GN=uxs1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.252e-15 Identity = 46/85 (54.12%), Postives = 50/85 (58.82%), Query Frame = 3
Query: 2061 FQTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCF 2309
+T+KTN IGTLNMLGLAKRVGARL LL STSEVYGDP VHPQ E YWG+VNPIG C+
Sbjct: 174 IKTLKTNTIGTLNMLGLAKRVGARL--------------------------LLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACY 232 HSP 2 Score: 59.3066 bits (142), Expect = 1.432e-7 Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 2638 VACLYCF------NIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
VA C+ +E+R+ARIFNT+GPRM+++DGRVVSNFI QAL+
Sbjct: 238 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQ 284
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens OX=9606 GN=UXS1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.698e-15 Identity = 46/85 (54.12%), Postives = 50/85 (58.82%), Query Frame = 3
Query: 2061 FQTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCF 2309
+T+KTN IGTLNMLGLAKRVGARL LL STSEVYGDP VHPQ E YWG+VNPIG C+
Sbjct: 173 IKTLKTNTIGTLNMLGLAKRVGARL--------------------------LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 231 HSP 2 Score: 59.3066 bits (142), Expect = 1.452e-7 Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 2638 VACLYCF------NIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
VA C+ +E+R+ARIFNT+GPRM+++DGRVVSNFI QAL+
Sbjct: 237 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQ 283
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii OX=9601 GN=UXS1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.747e-15 Identity = 46/85 (54.12%), Postives = 50/85 (58.82%), Query Frame = 3
Query: 2061 FQTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCF 2309
+T+KTN IGTLNMLGLAKRVGARL LL STSEVYGDP VHPQ E YWG+VNPIG C+
Sbjct: 173 IKTLKTNTIGTLNMLGLAKRVGARL--------------------------LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 231 HSP 2 Score: 59.3066 bits (142), Expect = 1.478e-7 Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 2638 VACLYCF------NIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
VA C+ +E+R+ARIFNT+GPRM+++DGRVVSNFI QAL+
Sbjct: 237 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQ 283
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus OX=10090 GN=Uxs1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.847e-15 Identity = 46/85 (54.12%), Postives = 50/85 (58.82%), Query Frame = 3
Query: 2061 FQTIKTNVIGTLNMLGLAKRVGARLPNCL*KNDKFSIYNQLWSNSYYIDRILLTSTSEVYGDPLVHPQPESYWGNVNPIG--TCF 2309
+T+KTN IGTLNMLGLAKRVGARL LL STSEVYGDP VHPQ E YWG+VNPIG C+
Sbjct: 173 IKTLKTNTIGTLNMLGLAKRVGARL--------------------------LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 231 HSP 2 Score: 59.3066 bits (142), Expect = 1.465e-7 Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 2638 VACLYCF------NIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALR 2760
VA C+ +E+R+ARIFNT+GPRM+++DGRVVSNFI QAL+
Sbjct: 237 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQ 283 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23551 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23551_La_Tanjil_v1.0 ID=rna-TanjilR_23551_La_Tanjil_v1.0; Name=rna-TanjilR_23551; organism=Lupinus angustifolius; type=mRNA; length=3619bpback to top protein sequence of rna-TanjilR_23551_La_Tanjil_v1.0 >rna-TanjilR_23551_La_Tanjil_v1.0 ID=rna-TanjilR_23551_La_Tanjil_v1.0; Name=rna-TanjilR_23551_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=345bpback to top mRNA from alignment at Chr_LG08-CM007368.1:23944299..23947917- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23551_La_Tanjil_v1.0 ID=rna-TanjilR_23551_La_Tanjil_v1.0; Name=rna-TanjilR_23551; organism=Lupinus angustifolius; type=mRNA; length=3619bp; location=Sequence derived from: Chr_LG08-CM007368.1:23944299..23947917- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:23944299..23947917- >rna-TanjilR_23551_La_Tanjil_v1.0 ID=rna-TanjilR_23551_La_Tanjil_v1.0; Name=rna-TanjilR_23551; organism=Lupinus angustifolius; type=CDS; length=1038bp; location=Sequence derived from: Chr_LG08-CM007368.1:23944299..23947917- (Lupinus angustifoliusback to top |