rna-TanjilR_23548
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum OX=4081 PE=1 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 1.122e-119 Identity = 160/225 (71.11%), Postives = 187/225 (83.11%), Query Frame = 1 Query: 76 LFLTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCGGRLQCNGAGGSPPATLAQFEVHHGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFCH 750 LTLVNNC YT+WPAIQPNAGHP+L GG L+ LTH++ P P++HWSGR+W RTGC Y + +F CATGDCGGR++C+G GG+ PATLAQF +HHG+ DFS+YGVSLVDGFNIPLT+TPHEGKGVCPVVGCR +L+ +CP LQ R GHGPVV CKS CEAF +DE CC NHYNSPQ CK S YS +FKHACPATFT+AHD+PS MH+CSSPRELK+IFCH Sbjct: 29 FILTLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPLTVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFCH 252
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g18250 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 3.504e-60 Identity = 103/226 (45.58%), Postives = 137/226 (60.62%), Query Frame = 1 Query: 70 NALFLTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCGGRLQCNGAGGSPPATLAQFEVHHGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 +A + N CK+ VWP IQP+AG LLAGGG +L ++ P WSGR W R GCT+ + + CATGDCGG L CNGAGG PPATLA+ + + Y VSLVDG+N+ ++I P +G G C GC +DL CP LQ R G VVACKS C AF++ + CCT + +PQ CK + YS FK ACP +++A+D+P+ + CS + + FC Sbjct: 19 SASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPP-LWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITL---GPELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGK-RVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYI-VTFC 238
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana OX=3702 GN=At1g75040 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 5.012e-52 Identity = 100/226 (44.25%), Postives = 127/226 (56.19%), Query Frame = 1 Query: 73 ALFLTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCGGRLQCNGAGGSPPATLAQFE-VHHGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 A TL NNC TVW G P L GG +L P + + P + WSGR W RTGC + A+ C TGDCGG L+CNG GG PP TLA+F V G DF Y VSLVDG+N+ L I P G G C GC +DL A CP L+ + VVACKS CE F+TD+ CC + P+ C + YS FK+ACP +++A+D+ + C+ +I FC Sbjct: 23 ATDFTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQLTAP-AGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNG-GGVPPVTLAEFTLVGDGGKDF--YDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLK---VMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTGA-NYEITFC 238
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: THLP1_ARATH (Thaumatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 5.363e-52 Identity = 98/231 (42.42%), Postives = 131/231 (56.71%), Query Frame = 1 Query: 82 LTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANH-QFTCATGDCGG-RLQCNGAGGSPPATLAQFEVHHG------NNDFSSYGVSLVDGFNIPLTITPHEG-KGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 +T+VN C +TVWP I N+G + G +L P ++ P S WSGR W RTGC + ++ Q TC TGDCG +++CNGAG PPATLA+F + G DF Y VSLVDG+N+P+ + G +G C GC DL CP L+ G ACKS CEAF + E CC+ Y SP CK S+YS FK ACP ++++A D+ + C+ + I FC Sbjct: 35 ITIVNRCSFTVWPGILSNSGSGDIGTTGFELVPGGSRSFQAPAS-WSGRFWARTGCNFNSDTGQGTCLTGDCGSNQVECNGAGAKPPATLAEFTIGSGPADPARKQDF--YDVSLVDGYNVPMLVEASGGSEGTCLTTGCVTDLNQKCPTELRF------GSGSACKSACEAFGSPEYCCSGAYASPTECKPSMYSEIFKSACPRSYSYAFDDATSTFTCTDA-DYTITFC 255
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0706600 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 9.232e-51 Identity = 88/222 (39.64%), Postives = 124/222 (55.86%), Query Frame = 1 Query: 82 LTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCGGRLQCNGAGGSPPATLAQFEVHHGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 L +VNNC +VWP + AGHP GG L + P + WSGRVWPR GC++ + + +CATGDCGG L+CNGA G+ PAT+ + + + Y VSLVDGFN P+++ G C C D+ CP L+ R G V C+S C A D CCT Y SP C+ +++S FK CP +++A+D+ + +++C + R L I FC Sbjct: 31 LIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVP-AGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDR--EGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYL-ITFC 248
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica OX=3760 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.090e-50 Identity = 94/227 (41.41%), Postives = 125/227 (55.07%), Query Frame = 1 Query: 73 ALFLTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCG-GRLQCNGAGGSPPATLAQFEV-HHGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 A +T N C YTVWP P L+ G +L +++ P S WSGR + RT C+ A+ +FTCAT DCG G++ CNG G +PPATL + + +G DF Y VSLVDGFN+P+++ P G G C C D+ CP PLQ V G V+ACKS C AF+ + CCT + P+ C YS FK CP +++A+D+ S CS I FC Sbjct: 24 AAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAP-SPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDF--YDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQ--VKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFC 245
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica OX=3750 GN=TL1 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.411e-50 Identity = 91/227 (40.09%), Postives = 125/227 (55.07%), Query Frame = 1 Query: 73 ALFLTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCG-GRLQCNGAGGSPPATLAQFEVH-HGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 A +T NNC TVWP P L+ G +L +++ P S WSGR W RT C+ A +FTC T DCG G++ CNGAG PPATL + + +G D+ Y VSLVDGFN+P+++ P G G C C ++ CP PLQ V G V++CKS C AF + CCT N+P+ C + YS F+ CP +++A+D+ + CS + I FC Sbjct: 24 AAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAP-SPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDY--YDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQ--VKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 245
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium OX=42229 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.697e-48 Identity = 91/227 (40.09%), Postives = 123/227 (54.19%), Query Frame = 1 Query: 73 ALFLTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCG-GRLQCNGAGGSPPATLAQFEV-HHGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 A ++ NNC Y VWP + P L+ G +L + P W+GR W RTGC+ A+ +F CAT DC G++ CNG G PPATLA+F + G DF Y VSLVDGFN+P+++TP G G C C ++ A CP LQ + G VVAC S C F T + CCT N+P+ C + YS F +ACP +++A+D+ C+ I FC Sbjct: 23 AATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTP-VPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDF--YDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKG--SDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC 244
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica OX=3750 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.057e-44 Identity = 83/215 (38.60%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 109 TVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCG-GRLQCNGAGGSPPATLAQFEVH-HGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 TVWP P L+ +L Q++ P S WSGR W RT C+ A +F+C T DCG G++ CNGAG PPATL + + +G D+ Y VSLVDGFN+P+++ P G G C C ++ CP LQ V G V++CKS C AF + CCT ++P+ C + YS F+ CP +++A+D+ + CS + I FC Sbjct: 2 TVWPGTLTGDQKPQLSLTAFELASKASQSVDAP-SPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDY--YDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQ--VKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 211
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa OX=21020 GN=TL1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.764e-44 Identity = 81/223 (36.32%), Postives = 115/223 (51.57%), Query Frame = 1 Query: 82 LTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCG-GRLQCNGAGGSPPATLAQFEVHHGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFC 747 +T NNC T+WP + P L G L T+ + W GR W RT CT + +FTC T DC G++ CNG G PPA+L + + N Y VSLVDG+N+P+++ G G C CR ++ A CP LQ V V+ACKS C AF+ + CCT +++ + C + YS FK CP +++A+D+ + CS + I FC Sbjct: 25 ITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGV-QAPWKGRFWARTRCT-TNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIA-ANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQ--VKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFC 242 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23548 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23548_La_Tanjil_v1.0 ID=rna-TanjilR_23548_La_Tanjil_v1.0; Name=rna-TanjilR_23548; organism=Lupinus angustifolius; type=mRNA; length=753bpback to top protein sequence of rna-TanjilR_23548_La_Tanjil_v1.0 >rna-TanjilR_23548_La_Tanjil_v1.0 ID=rna-TanjilR_23548_La_Tanjil_v1.0; Name=rna-TanjilR_23548_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=250bpback to top mRNA from alignment at Chr_LG08-CM007368.1:23966315..23967067- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23548_La_Tanjil_v1.0 ID=rna-TanjilR_23548_La_Tanjil_v1.0; Name=rna-TanjilR_23548; organism=Lupinus angustifolius; type=mRNA; length=753bp; location=Sequence derived from: Chr_LG08-CM007368.1:23966315..23967067- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:23966315..23967067- >rna-TanjilR_23548_La_Tanjil_v1.0 ID=rna-TanjilR_23548_La_Tanjil_v1.0; Name=rna-TanjilR_23548; organism=Lupinus angustifolius; type=CDS; length=753bp; location=Sequence derived from: Chr_LG08-CM007368.1:23966315..23967067- (Lupinus angustifoliusback to top |