rna-TanjilR_23540

Transcript Overview
Namerna-TanjilR_23540
Unique Namerna-TanjilR_23540_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1149
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG08-CM007368.1supercontigChr_LG08-CM007368.1:24021151..24022299 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL122Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL254Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL591Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1271Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1332Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1340Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1392Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1451Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1457Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1096Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1146Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1285Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1340Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0947Pisum sativum Cameor genome v1aPisum sativum
anpsR0973Pisum sativum Cameor genome v1aPisum sativum
anpvR1275Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1286Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1084Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1110Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1274Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1079Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1118Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvrvR1072Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1089Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1036Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1065Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1223Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1240Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1251Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR1001Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR1045Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1060Cicer arietinum
ancarR1074Cicer arietinum
ancarR1105Cicer arietinum
anccaR1056Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1080Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1096Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1258Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1276Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1283Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1188Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR1262Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1260Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1266Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1275Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1283Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1275Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR1045Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1072Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1313Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1340Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1378Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vum_06G01351.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.06G172300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_16685Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
PvulFLAVERTChr11.1000421Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_004505807.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
XM_058877549.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_09275.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.011G064100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014637924.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Ca_18594.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Psat07G0591800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cr_14486.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun11g155500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigan.06G200300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.model.Chr11.1460Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun11g155500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_021803Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_03304Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_23540gene-TanjilG_23540_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23540rna-TanjilR_23540_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_23540_La_Tanjil_v1.0rna-TanjilR_23540_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23540_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24021151..24021245rna-TanjilR_23540_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24021151..24021245Lupinus angustifoliusexon
rna-TanjilR_23540_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24022113..24022299rna-TanjilR_23540_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24022113..24022299Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23540_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24021151..24021245rna-TanjilR_23540_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24021151..24021245Lupinus angustifoliusCDS
rna-TanjilR_23540_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24022113..24022299rna-TanjilR_23540_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24022113..24022299Lupinus angustifoliusCDS


Homology
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_ORYSJ (Mitochondrial import inner membrane translocase subunit Tim9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIM9 PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.923e-31
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1 
Query:  961 SLRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELNQGAATQD 1146
            SLRMYNSLVERCFTDCVDTF+ K+L KQEE+C+RRCAEKFLKHSMRVG+RFAELNQG AT D
Sbjct:   32 SLRMYNSLVERCFTDCVDTFRRKTLDKQEESCVRRCAEKFLKHSMRVGMRFAELNQGVATPD 93

HSP 2 Score: 56.6102 bits (135), Expect = 5.184e-9
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 1 
Query:    1 MDKSMLGDLDSLPEADKQRMSTMIDQLQIRD 93
            MDKSMLGDLD LPE DK RM+ M+DQLQIRD
Sbjct:    1 MDKSMLGDLDGLPEEDKMRMAAMVDQLQIRD 31
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_MESCR (Mitochondrial import inner membrane translocase subunit Tim9 OS=Mesembryanthemum crystallinum OX=3544 GN=TIM9 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.050e-31
Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 1 
Query:  961 SLRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELNQGAATQD 1146
            SLRMYN+LVERCFTDCVD+F+ K+L KQEETC++RCAEKFLKHSMRVGLRFAELNQGAAT D
Sbjct:   32 SLRMYNNLVERCFTDCVDSFRRKTLDKQEETCVKRCAEKFLKHSMRVGLRFAELNQGAATTD 93

HSP 2 Score: 53.1434 bits (126), Expect = 7.103e-8
Identity = 23/31 (74.19%), Postives = 29/31 (93.55%), Query Frame = 1 
Query:    1 MDKSMLGDLDSLPEADKQRMSTMIDQLQIRD 93
            MDK+MLGDLD+LPE DK +M++MI+QLQIRD
Sbjct:    1 MDKNMLGDLDNLPEEDKLKMASMIEQLQIRD 31
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_ARATH (Mitochondrial import inner membrane translocase subunit TIM9 OS=Arabidopsis thaliana OX=3702 GN=TIM9 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.839e-29
Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 1 
Query:  961 SLRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELNQGAATQD 1146
            SLRMYNSLVERCF DCVD+F  KSL KQEETC+ RCAEKFLKH+MRVG+RFAELNQ A TQD
Sbjct:   32 SLRMYNSLVERCFVDCVDSFTRKSLQKQEETCVMRCAEKFLKHTMRVGMRFAELNQNAPTQD 93
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_ZYGBA (Mitochondrial import inner membrane translocase subunit Tim9 OS=Zygosaccharomyces bailii OX=4954 GN=TIM9 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.573e-17
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 1 
Query:  964 LRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELN 1125
            +R+Y++LVERCFTDCV+ F    LT +E+TCI RC+EKFLKHS RVGLRF E N
Sbjct:   25 MRLYSNLVERCFTDCVNDFTSSKLTSKEQTCISRCSEKFLKHSERVGLRFQEQN 78
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_YARLI (Mitochondrial import inner membrane translocase subunit TIM9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=TIM9 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.364e-16
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = 1 
Query:  964 LRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELN 1125
            +R+Y+SLV+RCFTDCV+ F  K+L+ +EE+C+ +C+EKFLKHS RVG RF E N
Sbjct:   25 MRLYSSLVQRCFTDCVNDFTSKALSSREESCLEKCSEKFLKHSERVGQRFQEQN 78
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_ASHGO (Mitochondrial import inner membrane translocase subunit TIM9 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=TIM9 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.570e-16
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 1 
Query:  964 LRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELN 1125
            +R+Y++LVERCF+DCV+ F    LT +E+TCI RC+EKFLKHS RVG RF E N
Sbjct:   25 MRLYSNLVERCFSDCVNDFTSSKLTSKEQTCIMRCSEKFLKHSERVGQRFQEQN 78
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_YEAST (Mitochondrial import inner membrane translocase subunit TIM9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM9 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.537e-16
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 1 
Query:  964 LRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELN 1125
            +R+Y++LVERCFTDCV+ F    LT +E+TCI +C+EKFLKHS RVG RF E N
Sbjct:   25 MRLYSNLVERCFTDCVNDFTTSKLTNKEQTCIMKCSEKFLKHSERVGQRFQEQN 78
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_CANGA (Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=TIM9 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.793e-16
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 1 
Query:  964 LRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELN 1125
            +R+Y+ LVERCFTDCV+ F    LT +EE+CI +C+EKFLKHS RVG RF E N
Sbjct:   25 MRLYSGLVERCFTDCVNDFTSSKLTSKEESCILKCSEKFLKHSERVGQRFQEQN 78
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_KLULA (Mitochondrial import inner membrane translocase subunit TIM9 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TIM9 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.206e-15
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 1 
Query:  964 LRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELN 1125
            +R+Y++LVERCF+DCV+ F    LT +E+ CI RC+EKFLKHS RVG RF E N
Sbjct:   25 MRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCSEKFLKHSERVGQRFQEQN 78
[Close]
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Match: TIM9_CANAL (Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=TIM9 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.178e-14
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:  964 LRMYNSLVERCFTDCVDTFKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELN 1125
            + +Y++LV RCF DCV+ F   SLT +E +CI +C+EKFLKHS RVG RF E N
Sbjct:   25 MNLYSNLVSRCFDDCVNDFTSNSLTSKETSCIAKCSEKFLKHSERVGQRFQEQN 78
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23540 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
TIM9_ORYSJ1.923e-3185.48Mitochondrial import inner membrane translocase su... [more]
TIM9_MESCR3.050e-3185.48Mitochondrial import inner membrane translocase su... [more]
TIM9_ARATH1.839e-2982.26Mitochondrial import inner membrane translocase su... [more]
TIM9_ZYGBA1.573e-1766.67Mitochondrial import inner membrane translocase su... [more]
TIM9_YARLI1.364e-1661.11Mitochondrial import inner membrane translocase su... [more]
TIM9_ASHGO2.570e-1662.96Mitochondrial import inner membrane translocase su... [more]
TIM9_YEAST3.537e-1662.96Mitochondrial import inner membrane translocase su... [more]
TIM9_CANGA3.793e-1662.96Mitochondrial import inner membrane translocase su... [more]
TIM9_KLULA1.206e-1561.11Mitochondrial import inner membrane translocase su... [more]
TIM9_CANAL4.178e-1457.41Mitochondrial import inner membrane translocase su... [more]
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810coord: 7..92
e-value: 1.1E-32
score: 113.5
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 28..89
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 25..84
e-value: 1.7E-19
score: 69.2

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_23540_La_Tanjil_v1.0 ID=rna-TanjilR_23540_La_Tanjil_v1.0; Name=rna-TanjilR_23540; organism=Lupinus angustifolius; type=mRNA; length=1149bp
ATGGATAAGAGCATGTTAGGGGATCTGGATTCTCTTCCAGAAGCAGATAA
GCAAAGAATGTCTACCATGATCGATCAGCTCCAAATCCGTGACAGgttca
atttttgtttctttctttcttcaatccTTAAAGTTggaatctttatttat
ttttaatgctttttttttaaaaaaggtGCGAATTTTAGCTGTTACAAGTT
TTGTTGTCGGATTCAGTAAAATTATGTGTTGCTTCAGATTTTGGTGCTtc
attatagtttttttttaatgggCATCACAATATTAtcgagttttttatac
tgttgcTGCGAAGCTATATTGAAATTCTCCTTAAAACCAGTTCAACATTA
TATGAATGTTGCTCCTGCACGTTTTGGCAGCAACATTTGTGAAGAGTTTT
CCCCCTCTTTGCAATTGTATGTTACCTTCACTGATTAGAATTAATTAGCA
CTTGAACTTAAACTAAGTACTAGAACCTTTTTCGATGTAGTCAGAGTTGG
CATTTTTCATTTCTCAGTGATTGTCTTTTTTAACAAAATACTTGTAATTC
TTGGTTCTATCTGGctaataattttcatataaatactTGTATGTATTAGA
TTATAACGTTTTATTGGtgtttattttctcttatgcaTGTAAATGGCTGA
GGATATAGAACATGTTTATAAAATAGATTATGACATAGTAAGGTTATAGG
TTACTGCTTGATGAAAACCAAAATCCTTTGctcttattttctcttaaatC
CCTTGCTCTTTTAATATCTGTTTGTCATTTGGTCTTTGGAGGAAAAGGAA
GTGAAGGCTCGAGGGCTACTTgcaagtgtattttatggttCCCAAGCCTT
TCCCTTCCTCTATTACCCTCCGAAAACCGATTCCTCTCAAAGAGACCTTT
TGACCAATATGTTGCATGGGATTATACATAGGAACCTGATTATGATATGT
GTTTTATTGCAGTCTGAGAATGTACAATTCATTGGTGGAGAGATGCTTTA
CCGATTGTGTTGACACATTTAAGCATAAATCCCTGACAAAGCAGGAGGAA
ACCTGTATCCGAAGATGTGCTGAGAAATTTCTAAAGCATTCCATGCGTGT
TGGCTTGAGGTTTGCTGAGCTCAACCAAGGAGCTGCAACACAAGATTGA
back to top

protein sequence of rna-TanjilR_23540_La_Tanjil_v1.0

>rna-TanjilR_23540_La_Tanjil_v1.0 ID=rna-TanjilR_23540_La_Tanjil_v1.0; Name=rna-TanjilR_23540_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=93bp
MDKSMLGDLDSLPEADKQRMSTMIDQLQIRDSLRMYNSLVERCFTDCVDT
FKHKSLTKQEETCIRRCAEKFLKHSMRVGLRFAELNQGAATQD
back to top

mRNA from alignment at Chr_LG08-CM007368.1:24021151..24022299+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_23540_La_Tanjil_v1.0 ID=rna-TanjilR_23540_La_Tanjil_v1.0; Name=rna-TanjilR_23540; organism=Lupinus angustifolius; type=mRNA; length=1149bp; location=Sequence derived from: Chr_LG08-CM007368.1:24021151..24022299+ (Lupinus angustifolius
ATGGATAAGAGCATGTTAGGGGATCTGGATTCTCTTCCAGAAGCAGATAA
GCAAAGAATGTCTACCATGATCGATCAGCTCCAAATCCGTGACAGgttca
atttttgtttctttctttcttcaatccTTAAAGTTggaatctttatttat
ttttaatgctttttttttaaaaaaggtGCGAATTTTAGCTGTTACAAGTT
TTGTTGTCGGATTCAGTAAAATTATGTGTTGCTTCAGATTTTGGTGCTtc
attatagtttttttttaatgggCATCACAATATTAtcgagttttttatac
tgttgcTGCGAAGCTATATTGAAATTCTCCTTAAAACCAGTTCAACATTA
TATGAATGTTGCTCCTGCACGTTTTGGCAGCAACATTTGTGAAGAGTTTT
CCCCCTCTTTGCAATTGTATGTTACCTTCACTGATTAGAATTAATTAGCA
CTTGAACTTAAACTAAGTACTAGAACCTTTTTCGATGTAGTCAGAGTTGG
CATTTTTCATTTCTCAGTGATTGTCTTTTTTAACAAAATACTTGTAATTC
TTGGTTCTATCTGGctaataattttcatataaatactTGTATGTATTAGA
TTATAACGTTTTATTGGtgtttattttctcttatgcaTGTAAATGGCTGA
GGATATAGAACATGTTTATAAAATAGATTATGACATAGTAAGGTTATAGG
TTACTGCTTGATGAAAACCAAAATCCTTTGctcttattttctcttaaatC
CCTTGCTCTTTTAATATCTGTTTGTCATTTGGTCTTTGGAGGAAAAGGAA
GTGAAGGCTCGAGGGCTACTTgcaagtgtattttatggttCCCAAGCCTT
TCCCTTCCTCTATTACCCTCCGAAAACCGATTCCTCTCAAAGAGACCTTT
TGACCAATATGTTGCATGGGATTATACATAGGAACCTGATTATGATATGT
GTTTTATTGCAGTCTGAGAATGTACAATTCATTGGTGGAGAGATGCTTTA
CCGATTGTGTTGACACATTTAAGCATAAATCCCTGACAAAGCAGGAGGAA
ACCTGTATCCGAAGATGTGCTGAGAAATTTCTAAAGCATTCCATGCGTGT
TGGCTTGAGGTTTGCTGAGCTCAACCAAGGAGCTGCAACACAAGATTGA
back to top

Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24021151..24022299+

>rna-TanjilR_23540_La_Tanjil_v1.0 ID=rna-TanjilR_23540_La_Tanjil_v1.0; Name=rna-TanjilR_23540; organism=Lupinus angustifolius; type=CDS; length=282bp; location=Sequence derived from: Chr_LG08-CM007368.1:24021151..24022299+ (Lupinus angustifolius
ATGGATAAGAGCATGTTAGGGGATCTGGATTCTCTTCCAGAAGCAGATAA
GCAAAGAATGTCTACCATGATCGATCAGCTCCAAATCCGTGACAGTCTGA
GAATGTACAATTCATTGGTGGAGAGATGCTTTACCGATTGTGTTGACACA
TTTAAGCATAAATCCCTGACAAAGCAGGAGGAAACCTGTATCCGAAGATG
TGCTGAGAAATTTCTAAAGCATTCCATGCGTGTTGGCTTGAGGTTTGCTG
AGCTCAACCAAGGAGCTGCAACACAAGATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR035427Tim10-like_dom_sf
IPR004217Tim10-like