rna-TanjilR_23534
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: FTSH8_ORYSJ (ATP-dependent zinc metalloprotease FTSH 8, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH8 PE=3 SV=1) HSP 1 Score: 462.996 bits (1190), Expect = 1.450e-140 Identity = 237/251 (94.42%), Postives = 249/251 (99.20%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRV 2937
AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES VPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSG+NDERESTLNQLLVEMDGFGTT+GVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF+IYLKK+KLD+EPS++SQRLAALTPGFAGADIANVCNEAALIAAR E+TQ+TM+HFESAIDRIIGGLEK+N+V
Sbjct: 338 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKV 588 HSP 2 Score: 245.743 bits (626), Expect = 3.762e-66 Identity = 117/160 (73.12%), Postives = 140/160 (87.50%), Query Frame = 2
Query: 4268 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPFKSAEPTNYDRFKQGFQEDEEKIIEKPVNEPEENGGSSPLDPLVVPT 4747
+VLIGRISTGAQNDLEKVTKMTYAQVAVYGFS+KVGLLSFPQR+D FEM+KPYS++TA+IID+EVREWVGKAY++T+ LI EHKEQV KIAE+LLEKEVLHQDD+VRVLGERPFK++EPTNYD FKQGFQ++E+ ++ P+ + +P VVPT
Sbjct: 663 EVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRDDGFEMTKPYSNQTASIIDDEVREWVGKAYKKTVELITEHKEQVAKIAEMLLEKEVLHQDDLVRVLGERPFKASEPTNYDLFKQGFQDEEDSKNQEAAKTPQPDDDGTPSLGEVVPT 822 HSP 3 Score: 240.35 bits (612), Expect = 2.245e-64 Identity = 120/161 (74.53%), Postives = 143/161 (88.82%), Query Frame = 2
Query: 5678 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPFKSAEPTNYDRFKQGFEEVEE-KILESPVNESGESGGSPPLDPQVVPT 6157
+VLIGRISTGAQNDLEKVTKMTYAQVAVYGFS+KVGLLSFPQR+D FEM+KPYS++TA+IID+EVREWVGKAY+KTV+LI EHKE+VAKIAE+LLEKEVLHQDDL++VLGERPFK++EPTNYD FKQGF++ E+ K E+ + G+P L +VVPT
Sbjct: 663 EVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRDDGFEMTKPYSNQTASIIDDEVREWVGKAYKKTVELITEHKEQVAKIAEMLLEKEVLHQDDLVRVLGERPFKASEPTNYDLFKQGFQDEEDSKNQEAAKTPQPDDDGTPSLG-EVVPT 822 HSP 4 Score: 187.193 bits (474), Expect = 5.790e-47 Identity = 108/168 (64.29%), Postives = 133/168 (79.17%), Query Frame = 3
Query: 1488 DSLQISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPA-----DSEVVQGTLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSEMVWFQELLRFAPXXXXXXXXXXXXRKMQXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKV 1976
D +ISFQEFKNKLLEPGLVD IVV+NKSVAKVYVRSSP++ + D+ + +P + T +Y YYFNIGSV+SFEEKLEEAQEALG+DPHD++PVTY +E+ WFQE++RFAPT+ L+G + M ++MQ G G GKGGRGIFNIGKA VTK+DKN+KNKV
Sbjct: 166 DQKEISFQEFKNKLLEPGLVDRIVVSNKSVAKVYVRSSPQSNSQGQNTDAIITTNDVPSKHTPSRYKYYFNIGSVDSFEEKLEEAQEALGVDPHDFVPVTYVAEVNWFQEVMRFAPTVFLVGLIYLMSKRMQ-SGFNIGGGPGKGGRGIFNIGKAQVTKMDKNSKNKV 332 HSP 5 Score: 169.474 bits (428), Expect = 3.014e-41 Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = 3
Query: 3717 NQVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVI 3956
N+VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAE+V+
Sbjct: 586 NKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEEVL 665 HSP 6 Score: 134.035 bits (336), Expect = 4.006e-30 Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVI 5366
HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAE+V+
Sbjct: 604 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEEVL 665
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: FTSHA_ARATH (ATP-dependent zinc metalloprotease FTSH 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FTSH10 PE=1 SV=1) HSP 1 Score: 461.07 bits (1185), Expect = 5.509e-140 Identity = 238/251 (94.82%), Postives = 245/251 (97.61%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRV 2937
AGC+EAKQEIMEFVHFL+NPKKYE+LGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSG NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSY+SQRLAALTPGFAGADIANVCNEAALIAAR E VTM HF+SAIDR+IGGLEK+NRV
Sbjct: 330 AGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRV 580 HSP 2 Score: 240.35 bits (612), Expect = 2.188e-64 Identity = 125/161 (77.64%), Postives = 140/161 (86.96%), Query Frame = 2
Query: 5678 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPFKSAEPTNYDRFKQGFEEVEEKILESPVN-ESGESGGSPPLDPQVVPT 6157
QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDK+GLLSFPQRED F SKPYS++T A+ID EVREWVGKAY++TV+LIEEHKE+VA+IAELLLEKEVLHQDDL +VLGERPFKS E TNYDRFK GFEE E++ + V + E G PPL+PQVVPT
Sbjct: 655 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQREDEF--SKPYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGERPFKSGETTNYDRFKSGFEESEKESQKESVPVKPVEDDGIPPLEPQVVPT 813 HSP 3 Score: 238.424 bits (607), Expect = 9.086e-64 Identity = 122/161 (75.78%), Postives = 139/161 (86.34%), Query Frame = 2
Query: 4268 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPFKSAEPTNYDRFKQGFQEDEEKIIEKPVN-EPEENGGSSPLDPLVVPT 4747
QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDK+GLLSFPQRED F SKPYS++T A+ID EVREWVGKAY+RT+ LIEEHKEQV +IAELLLEKEVLHQDD+ +VLGERPFKS E TNYDRFK GF+E E++ ++ V +P E+ G PL+P VVPT
Sbjct: 655 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQREDEF--SKPYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGERPFKSGETTNYDRFKSGFEESEKESQKESVPVKPVEDDGIPPLEPQVVPT 813 HSP 4 Score: 198.364 bits (503), Expect = 1.370e-50 Identity = 114/163 (69.94%), Postives = 135/163 (82.82%), Query Frame = 3
Query: 1497 QISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPADSEVVQG---TLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSEMVWFQELLRFAPXXXXXXXXXXXXRKMQXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKV 1976
QISFQEFKNKLLE GLVDHI V+NK VAKVYVRSSP++ EVVQG +P + GGQY YYFNIGSVESFEEKLEEAQEA+G++ HD++PVTY SE +W+QELLRFAPTL+L+ TL++ R+MQGGLG G GGK GRGIFNIGKA +T+ DKN+KNK+
Sbjct: 162 QISFQEFKNKLLEAGLVDHIDVSNKEVAKVYVRSSPKSQTTEEVVQGPGNGVPAKGRGGQYKYYFNIGSVESFEEKLEEAQEAIGVNSHDFVPVTYVSETIWYQELLRFAPTLLLVATLIFGARRMQGGLGGLGGPGGKAGRGIFNIGKAQITRADKNSKNKI 324 HSP 5 Score: 170.629 bits (431), Expect = 1.139e-41 Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 3
Query: 3717 NQVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVI 3956
N+VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV+
Sbjct: 578 NRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVL 657 HSP 6 Score: 135.576 bits (340), Expect = 1.390e-30 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVI 5366
HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV+
Sbjct: 596 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVL 657
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: FTSH3_ORYSJ (ATP-dependent zinc metalloprotease FTSH 3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH3 PE=2 SV=1) HSP 1 Score: 453.366 bits (1165), Expect = 2.546e-137 Identity = 231/251 (92.03%), Postives = 245/251 (97.61%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRV 2937
AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES VPFLSISGSDFMEMFVGVGPSRVRNLFQEARQC+PSI+FIDEIDAIGRARGRGGFSG +DERESTLNQLLVEMDGFGTT+GVVVLAGTNRPDILDKALLRPGRFDRQI+IDKPDIKGRDQIF+IYLKK+KLD EPS++SQRLAALTPGFAGADIANVCNEAALIAAR E T +TM+HFESAIDR+IGGLEK+N+V
Sbjct: 323 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSPSIVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFESAIDRVIGGLEKKNKV 573 HSP 2 Score: 239.195 bits (609), Expect = 4.228e-64 Identity = 112/131 (85.50%), Postives = 127/131 (96.95%), Query Frame = 2
Query: 5678 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPFKSAEPTNYDRFKQGFEE 6070
+VLIG+ISTGAQNDLEKVTKMTYAQVAVYGFS+KVGLLSFPQRED FEMSKPYSS+TA+IID EVREWV KAYEKTV+LI++HK++VA+IAELLLEKEVLHQDDL+QVLGERPFK+ EPTNYDRFKQGF++
Sbjct: 648 EVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDGFEMSKPYSSQTASIIDTEVREWVAKAYEKTVELIKQHKDQVAQIAELLLEKEVLHQDDLVQVLGERPFKTLEPTNYDRFKQGFQD 778 HSP 3 Score: 237.654 bits (605), Expect = 1.298e-63 Identity = 110/133 (82.71%), Postives = 127/133 (95.49%), Query Frame = 2
Query: 4268 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPFKSAEPTNYDRFKQGFQEDE 4666
+VLIG+ISTGAQNDLEKVTKMTYAQVAVYGFS+KVGLLSFPQRED FEMSKPYSS+TA+IID EVREWV KAYE+T+ LI++HK+QV +IAELLLEKEVLHQDD+V+VLGERPFK+ EPTNYDRFKQGFQ+++
Sbjct: 648 EVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDGFEMSKPYSSQTASIIDTEVREWVAKAYEKTVELIKQHKDQVAQIAELLLEKEVLHQDDLVQVLGERPFKTLEPTNYDRFKQGFQDED 780 HSP 4 Score: 169.088 bits (427), Expect = 3.536e-41 Identity = 96/164 (58.54%), Postives = 126/164 (76.83%), Query Frame = 3
Query: 1497 QISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPR----NPADSEVVQGTLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSEMVWFQELLRFAPXXXXXXXXXXXXRKMQXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKV 1976
+ISFQEFKNKLLEPGLVDHIVV+NKS+AKVYVRSSP +D + LPG + Y YYFNIGSV+SFEEKL+EAQ+AL IDPH Y+P+TY++E WF+E++++ PT++++G + +G+++Q G G GKGGR IF+IGK VTK+DKN+KNKV
Sbjct: 155 EISFQEFKNKLLEPGLVDHIVVSNKSIAKVYVRSSPSIDRIQDSDIHITTSHLPGIESPSSYKYYFNIGSVDSFEEKLQEAQKALEIDPHYYVPITYTTEAKWFEEVMKYVPTVLIIGLIYLLGKRIQ-NGFTVGGGPGKGGRSIFSIGKVQVTKLDKNSKNKV 317 HSP 5 Score: 167.933 bits (424), Expect = 6.572e-41 Identity = 76/80 (95.00%), Postives = 80/80 (100.00%), Query Frame = 3
Query: 3717 NQVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVI 3956
N+VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN+NLLMTKEQLFDMTCMTLGGRAAE+V+
Sbjct: 571 NKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDNLLMTKEQLFDMTCMTLGGRAAEEVL 650 HSP 6 Score: 132.88 bits (333), Expect = 9.219e-30 Identity = 59/62 (95.16%), Postives = 62/62 (100.00%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVI 5366
HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN+NLLMTKEQLFDMTCMTLGGRAAE+V+
Sbjct: 589 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDNLLMTKEQLFDMTCMTLGGRAAEEVL 650
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: FTSH3_ARATH (ATP-dependent zinc metalloprotease FTSH 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FTSH3 PE=1 SV=1) HSP 1 Score: 452.981 bits (1164), Expect = 4.449e-137 Identity = 235/252 (93.25%), Postives = 241/252 (95.63%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRVC 2940
AGCDEAKQEIMEFVHFLKNPKKYE+LGAKIPKGALLVGPPGTGKTLLAKATAGES VPFLSISGSDFMEMFVGVGPSRVR+LFQEARQ APSIIFIDEIDAIGRARGRGG G NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF+IYLKKIKLDHEPSY+SQRLAALTPGFAGADIANVCNEAALIAAR E VTM HFESAIDR+IGGLEK+NRV
Sbjct: 325 AGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGG-NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVIGGLEKKNRVI 575 HSP 2 Score: 246.514 bits (628), Expect = 1.702e-66 Identity = 121/161 (75.16%), Postives = 138/161 (85.71%), Query Frame = 2
Query: 5678 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPFKSAEPTNYDRFKQGFEEVEEKILESPVNE-SGESGGSPPLDPQVVPT 6157
QVLIG+ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP R+D ++ SKPYS+KT AIID EVR+WV KAYE+TV+L+EEHK +VA+IAELLLEKEVLHQDDLL++LGERPFKSAE TNYDRFK GFEE E+ +P E + G PP +PQVVPT
Sbjct: 649 QVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKILGERPFKSAEVTNYDRFKSGFEETEKDSAATPTVEPVVDDGAPPPFEPQVVPT 809 HSP 3 Score: 239.195 bits (609), Expect = 4.974e-64 Identity = 116/161 (72.05%), Postives = 135/161 (83.85%), Query Frame = 2
Query: 4268 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPFKSAEPTNYDRFKQGFQEDEEKIIEKPVNEP-EENGGSSPLDPLVVPT 4747
QVLIG+ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP R+D ++ SKPYS+KT AIID EVR+WV KAYERT+ L+EEHK +V +IAELLLEKEVLHQDD++++LGERPFKSAE TNYDRFK GF+E E+ P EP ++G P +P VVPT
Sbjct: 649 QVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKILGERPFKSAEVTNYDRFKSGFEETEKDSAATPTVEPVVDDGAPPPFEPQVVPT 809 HSP 4 Score: 199.519 bits (506), Expect = 5.729e-51 Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 3
Query: 1497 QISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPADSEVVQGT---LPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSEMVWFQELLRFAPXXXXXXXXXXXXRKMQXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKV 1976
QISFQEFKNKLLEPGLVDHI V+NKSVAKVYVRS+P++ ++VV G +P +RTGGQY YYFNIGSV+SFEEKLEEAQEALG+D H+Y+PVTY SEMVW+QE +RFAPTL+LLGTL+Y R+MQ G G GGK GRGIFNIGKA +T+ DK++KNK+
Sbjct: 158 QISFQEFKNKLLEPGLVDHIDVSNKSVAKVYVRSTPKDQQTTDVVHGNGNGIPAKRTGGQYKYYFNIGSVDSFEEKLEEAQEALGVDRHEYVPVTYVSEMVWYQEFMRFAPTLLLLGTLIYGARRMQ-GGLGVGGTGGKNGRGIFNIGKATITRADKHSKNKI 319 HSP 5 Score: 168.318 bits (425), Expect = 6.436e-41 Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 3
Query: 3717 NQVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVI 3956
N+VISKLERRTVAYHESGHAV GWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV+
Sbjct: 572 NRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVL 651 HSP 6 Score: 132.88 bits (333), Expect = 7.802e-30 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVI 5366
HAV GWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV+
Sbjct: 590 HAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVL 651
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: YTA12_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=yta12 PE=3 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 3.982e-103 Identity = 183/252 (72.62%), Postives = 210/252 (83.33%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRVC 2940
AG DEAK+EIMEFV FLKNPK YE LGAKIP+GA+L GPPGTGKTLLAKATAGE+ VPFLS+SGS+F+EMFVGVGPSRVR+LF AR+ AP IIFIDEIDAIG+ARGRGG G+NDERESTLNQLLVEMDGF ++ +VV AGTNRPD+LD ALLRPGRFDRQITID+PDI GR+QIF+++LK IK ++RLA LT GF GADI NVCNE ALIAAR +V M HFE AI+R+ GLEK++RV
Sbjct: 299 AGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVL 550 HSP 2 Score: 95.5153 bits (236), Expect = 2.700e-18 Identity = 40/79 (50.63%), Postives = 60/79 (75.95%), Query Frame = 3
Query: 3717 NQVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 3953
++V+S E+ TVA+HE+GHAVAGWF+E+ +PLLKV+I+PR ALG+A Y+P + LM++ Q+ D M L GR +E++
Sbjct: 547 SRVLSPEEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQ-ALGYASYLPKDQYLMSRGQILDQMGMALAGRVSEEI 624 HSP 3 Score: 91.2781 bits (225), Expect = 5.410e-17 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 2
Query: 4283 RISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP--QREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPF 4609
+I++GA +D +KVT+M A V YG S VG +++P RE + KP+S TA +ID E+R+ V AYERT L+ EHK+ + IA+ LL+KEV+ +++ +LG RP+
Sbjct: 630 KITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPIDTRE---TVQKPFSEATAQMIDEEIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNEVETILGPRPY 737 HSP 4 Score: 90.8929 bits (224), Expect = 8.080e-17 Identity = 47/111 (42.34%), Postives = 74/111 (66.67%), Query Frame = 2
Query: 5693 RISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP--QREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPF 6019
+I++GA +D +KVT+M A V YG S VG +++P RE + KP+S TA +ID E+R+ V AYE+T +L+ EHK+ + IA+ LL+KEV+ +++ +LG RP+
Sbjct: 630 KITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPIDTRE---TVQKPFSEATAQMIDEEIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNEVETILGPRPY 737 HSP 5 Score: 75.8702 bits (185), Expect = 3.049e-12 Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 5363
HAVAGWF+E+ +PLLKV+I+PR ALG+A Y+P + LM++ Q+ D M L GR +E++
Sbjct: 565 HAVAGWFMEYVDPLLKVSIIPRAQ-ALGYASYLPKDQYLMSRGQILDQMGMALAGRVSEEI 624 HSP 6 Score: 69.707 bits (169), Expect = 2.810e-10 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 3
Query: 1479 PEFDSLQISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPADSEVVQGTLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSEMVWFQELLRFAP 1820
P + +I++Q+F+ + L+ GLV+ +VV N+++ +V +R G G YYF+IGS++SF+ KLE+AQ LGI P +++PV Y E+ LL FAP
Sbjct: 152 PNANMQEITWQDFRQQFLDKGLVERLVVVNRNMVRVILR-----------------GGVASGSGQYYFSIGSIDSFDRKLEDAQRQLGIPPSEFVPVAYHDEVSVLATLLSFAP 248
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=AFG3 PE=1 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 3.269e-102 Identity = 179/257 (69.65%), Postives = 206/257 (80.16%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX-XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLD----HEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRVC 2940
AGCDEAKQEIMEFVHFLKNP KY +LGAKIP+GA+L GPPGTGKTLLAKATAGE+ VPFLS+SGS+F+EMFVGVG SRVR+LF +AR APSIIFIDEIDAI G GANDERE+TLNQLLVEMDGF T+ VVVLAGTNRPD+LD AL+RPGRFDR I ID PD+ GR QI+ ++LK++ LD + + S +LA LTPGF GADIAN CNEAALIAAR +T+ HFE AI+R+I GLEK+ RV
Sbjct: 291 AGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVL 547 HSP 2 Score: 105.916 bits (263), Expect = 1.737e-21 Identity = 44/78 (56.41%), Postives = 63/78 (80.77%), Query Frame = 3
Query: 3720 QVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 3953
+V+SK E+R+VAYHE+GHAV GWFL++A+PLLKV+I+PRG ALG+AQY+P + L+++EQ M LGGR +E++
Sbjct: 545 RVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFRHRMIMALGGRVSEEL 622 HSP 3 Score: 96.6709 bits (239), Expect = 1.167e-18 Identity = 46/109 (42.20%), Postives = 74/109 (67.89%), Query Frame = 2
Query: 4286 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPFK 4612
+++GA +D +KVT+M A V G S K+G LSF Q + +F+++KP+S+KTA ID EV+ V A+ L+ ++ ++V +A+ LL KE + ++DM+R+LG RPFK
Sbjct: 627 VTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGNFKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLLGPRPFK 735 HSP 4 Score: 93.9745 bits (232), Expect = 8.479e-18 Identity = 44/109 (40.37%), Postives = 75/109 (68.81%), Query Frame = 2
Query: 5696 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPFK 6022
+++GA +D +KVT+M A V G S K+G LSF Q + +F+++KP+S+KTA ID EV+ V A+ +L+ ++ ++V +A+ LL KE + ++D++++LG RPFK
Sbjct: 627 VTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGNFKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLLGPRPFK 735 HSP 5 Score: 80.4925 bits (197), Expect = 1.238e-13 Identity = 33/61 (54.10%), Postives = 47/61 (77.05%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 5363
HAV GWFL++A+PLLKV+I+PRG ALG+AQY+P + L+++EQ M LGGR +E++
Sbjct: 562 HAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFRHRMIMALGGRVSEEL 622 HSP 6 Score: 60.4622 bits (145), Expect = 1.700e-7 Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 3
Query: 1500 ISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPADSEVVQGTLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSEMVWFQELLRFAPXXXXXXXXXXXXRKMQXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKV 1976
++FQ+FK K LE GLV I V NK + ++E+V + F IGSV+ FEE++++ Q+ L I P D IP+ Y F L F PT++LLG L ++ RK+ GGG G G+FN+GK+ +K K+
Sbjct: 148 LTFQDFKTKYLEKGLVSKIYVVNKFLV------------EAELVNT---------KQVVSFTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSSPFTFLFPFLPTIILLGGLYFITRKINSSPPNANGGGGGGLGGMFNVGKSRAKLFNKETDIKI 285
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: YTA12_YEAST (Mitochondrial respiratory chain complexes assembly protein YTA12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YTA12 PE=1 SV=2) HSP 1 Score: 346.28 bits (887), Expect = 5.522e-100 Identity = 176/251 (70.12%), Postives = 213/251 (84.86%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRV 2937
AGCDEAK+EIMEFV FLK P +YE++GAKIP+GA+L GPPGTGKTLLAKATAGE+ VPF +SGS+F+EMFVGVG +RVR+LF+ AR+ APSI+FIDEIDAIG+AR +G FSGANDERE+TLNQ+LVEMDGF VVVLAGTNRPDILDKALLRPGRFDR I IDKP+++GR IF ++L +KL E RLAALTPGF+GADIANVCNEAALIAAR ++ V + HFE AI+R+IGG+E+++++
Sbjct: 351 AGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKL 601 HSP 2 Score: 103.605 bits (257), Expect = 1.123e-20 Identity = 42/78 (53.85%), Postives = 64/78 (82.05%), Query Frame = 3
Query: 3720 QVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 3953
+++S E++ VAYHE+GHAV GW+L++A+PLLKV+I+PRG ALG+AQY+P + L+T++QL D M+LGGR +E++
Sbjct: 600 KLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTMSLGGRVSEEL 677 HSP 3 Score: 100.908 bits (250), Expect = 6.465e-20 Identity = 48/108 (44.44%), Postives = 78/108 (72.22%), Query Frame = 2
Query: 4286 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPF 4609
+++GA +D +KVT M A V G SDK+G +++ +R+DS +++KP+S +T IID+EV V + ++R L++E E V KIA++LL+KEVL ++DM+ +LG+RPF
Sbjct: 682 VTSGASDDFKKVTSMATAMVTELGMSDKIGWVNYQKRDDS-DLTKPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGKRPF 788 HSP 4 Score: 99.7525 bits (247), Expect = 1.393e-19 Identity = 46/108 (42.59%), Postives = 80/108 (74.07%), Query Frame = 2
Query: 5696 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPF 6019
+++GA +D +KVT M A V G SDK+G +++ +R+DS +++KP+S +T IID+EV V + +++ +L++E E+V KIA++LL+KEVL ++D++ +LG+RPF
Sbjct: 682 VTSGASDDFKKVTSMATAMVTELGMSDKIGWVNYQKRDDS-DLTKPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGKRPF 788 HSP 5 Score: 84.3445 bits (207), Expect = 8.739e-15 Identity = 34/61 (55.74%), Postives = 50/61 (81.97%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 5363
HAV GW+L++A+PLLKV+I+PRG ALG+AQY+P + L+T++QL D M+LGGR +E++
Sbjct: 617 HAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTMSLGGRVSEEL 677 HSP 6 Score: 77.7962 bits (190), Expect = 9.616e-13 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 3
Query: 1497 QISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPADSEVVQGTLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSEMVWFQELLRFAP 1820
+I++Q+F+ KLL G V ++V NKS+ KV + + +N AD+ G+ YYF IGS++SFE KL++AQ+ L ID IPV Y E W + + + P
Sbjct: 205 EITWQDFREKLLAKGYVAKLIVVNKSMVKVMLNDNGKNQADNY------------GRNFYYFTIGSIDSFEHKLQKAQDELDIDKDFRIPVLYVQEGNWAKAMFQILP 300
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens OX=9606 GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 340.117 bits (871), Expect = 4.274e-98 Identity = 177/255 (69.41%), Postives = 215/255 (84.31%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDH--EPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRVCH 2943
AGC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEIDA+GR RGRG F G + E+E+TLNQLLVEMDGF TT VV+LAGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+++L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + +HFE AI+R+IGGLEK+ +V
Sbjct: 311 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQ 564 HSP 2 Score: 122.865 bits (307), Expect = 1.078e-26 Identity = 64/129 (49.61%), Postives = 89/129 (68.99%), Query Frame = 2
Query: 4268 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPFKSAEPTNYDRFKQG 4651
++ GRI+TGAQ+DL KVT+ YAQ+ +G ++KVG +SF R+ + KPYS TA +ID+EVR + AY+RT+ L+ E K V K+A LLLEKEVL ++DMV +LG RPF AE + Y+ F +G
Sbjct: 636 EIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEG 762 HSP 3 Score: 122.094 bits (305), Expect = 1.745e-26 Identity = 63/135 (46.67%), Postives = 94/135 (69.63%), Query Frame = 2
Query: 5678 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPFKSAEPTNYDRFKQGFEEVEE 6079
++ GRI+TGAQ+DL KVT+ YAQ+ +G ++KVG +SF R+ + KPYS TA +ID+EVR + AY++TV L+ E K +V K+A LLLEKEVL ++D++++LG RPF AE + Y+ F +G ++E
Sbjct: 636 EIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDE 768 HSP 4 Score: 118.242 bits (295), Expect = 2.784e-25 Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 3
Query: 3663 NSLFFFHLLVRILIPLFLN-QVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 3953
N F + R++ L QV+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D CMTLGGR +E++
Sbjct: 541 NQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEI 637 HSP 5 Score: 95.5153 bits (236), Expect = 3.459e-18 Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 5363
HAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D CMTLGGR +E++
Sbjct: 578 HAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEI 637 HSP 6 Score: 58.5362 bits (140), Expect = 6.745e-7 Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 3
Query: 1497 QISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPADSEVVQGTLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSE 1784
+I++++F N L G+VD + V NK +V + + P D GQY + FNIGSV++FE LE Q+ LGI+ + +PV Y +E
Sbjct: 169 EITWKDFVNNYLSKGVVDRLEVVNKRFVRVTF-TPGKTPVD--------------GQYVW-FNIGSVDTFERNLETLQQELGIEGENRVPVVYIAE 248
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus OX=9913 GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 1.023e-97 Identity = 176/255 (69.02%), Postives = 215/255 (84.31%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDH--EPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRVCH 2943
AGC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEIDA+GR RGRG F G + E+E+TLNQLLVEMDGF TT VV+LAGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+++L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + +HFE AI+R+IGGLEK+ +V
Sbjct: 312 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQ 565 HSP 2 Score: 122.865 bits (307), Expect = 1.110e-26 Identity = 64/129 (49.61%), Postives = 89/129 (68.99%), Query Frame = 2
Query: 4268 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPFKSAEPTNYDRFKQG 4651
++ GRI+TGAQ+DL KVT+ YAQ+ +G ++KVG +SF R+ + KPYS TA +ID+EVR + AY+RT+ L+ E K V K+A LLLEKEVL ++DMV +LG RPF AE + Y+ F +G
Sbjct: 637 EIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEG 763 HSP 3 Score: 122.094 bits (305), Expect = 1.829e-26 Identity = 63/135 (46.67%), Postives = 94/135 (69.63%), Query Frame = 2
Query: 5678 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPFKSAEPTNYDRFKQGFEEVEE 6079
++ GRI+TGAQ+DL KVT+ YAQ+ +G ++KVG +SF R+ + KPYS TA +ID+EVR + AY++TV L+ E K +V K+A LLLEKEVL ++D++++LG RPF AE + Y+ F +G ++E
Sbjct: 637 EIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDE 769 HSP 4 Score: 117.472 bits (293), Expect = 5.132e-25 Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 3
Query: 3663 NSLFFFHLLVRILIPLFLN-QVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 3953
N F + R++ L QV+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L T+EQL D CMTLGGR +E++
Sbjct: 542 NQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQLLDRMCMTLGGRVSEEI 638 HSP 5 Score: 94.3597 bits (233), Expect = 6.245e-18 Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 5363
HAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L T+EQL D CMTLGGR +E++
Sbjct: 579 HAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYLPREQYLYTREQLLDRMCMTLGGRVSEEI 638 HSP 6 Score: 58.9214 bits (141), Expect = 5.164e-7 Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 3
Query: 1497 QISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPADSEVVQGTLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSE 1784
+I++++F N L G+VD + V NK +V + + P D GQY + FNIGSV++FE LE Q+ LGI+ + +PV Y +E
Sbjct: 170 EITWKDFANNYLSKGVVDRLEVVNKRFVRVTF-TPGKTPVD--------------GQYVW-FNIGSVDTFERNLETLQQELGIEGENRVPVVYIAE 249
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus OX=10090 GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 1.763e-97 Identity = 177/255 (69.41%), Postives = 215/255 (84.31%), Query Frame = 1
Query: 2185 AGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDH--EPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEKTQVTMEHFESAIDRIIGGLEKRNRVCH 2943
AGC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEIDA+GR RGRG F G + E+E+TLNQLLVEMDGF TT VV+LAGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+++L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + +HFE AI+R+IGGLEK+ +V
Sbjct: 310 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQ 563 HSP 2 Score: 122.094 bits (305), Expect = 2.047e-26 Identity = 63/135 (46.67%), Postives = 92/135 (68.15%), Query Frame = 2
Query: 5678 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QREDSFEMSKPYSSKTAAIIDNEVREWVGKAYEKTVQLIEEHKEEVAKIAELLLEKEVLHQDDLLQVLGERPFKSAEPTNYDRFKQGFEEVEE 6079
++ GRI+TGAQ+DL KVT+ YAQ+ +G ++KVG +SF R+ + KPYS TA +ID+EVR + AY +TV L+ E K +V K+A LLLEKEVL ++D++Q+LG RPF E + Y+ F +G ++E
Sbjct: 635 EIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLLGPRPF--TEKSTYEEFVEGTGSLDE 767 HSP 3 Score: 121.709 bits (304), Expect = 2.289e-26 Identity = 63/129 (48.84%), Postives = 88/129 (68.22%), Query Frame = 2
Query: 4268 QVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QREDSFEMSKPYSSKTAAIIDNEVREWVGKAYERTIHLIEEHKEQVTKIAELLLEKEVLHQDDMVRVLGERPFKSAEPTNYDRFKQG 4651
++ GRI+TGAQ+DL KVT+ YAQ+ +G ++KVG +SF R+ + KPYS TA +ID+EVR + AY RT+ L+ E K V K+A LLLEKEVL ++DMV++LG RPF E + Y+ F +G
Sbjct: 635 EIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLLGPRPF--TEKSTYEEFVEG 761 HSP 4 Score: 118.242 bits (295), Expect = 2.866e-25 Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 3
Query: 3663 NSLFFFHLLVRILIPLFLN-QVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 3953
N F + R++ L QV+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D CMTLGGR +E++
Sbjct: 540 NEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEI 636 HSP 5 Score: 95.5153 bits (236), Expect = 3.171e-18 Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 3
Query: 5181 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQV 5363
HAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D CMTLGGR +E++
Sbjct: 577 HAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEI 636 HSP 6 Score: 58.151 bits (139), Expect = 8.648e-7 Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 3
Query: 1497 QISFQEFKNKLLEPGLVDHIVVTNKSVAKVYVRSSPRNPADSEVVQGTLPGQRTGGQYTYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYSSE 1784
+I++++F N L G+VD + V NK +V + + P D GQY + FNIGSV++FE LE Q+ LGI+ + +PV Y +E
Sbjct: 168 EITWKDFVNNYLSKGVVDRLEVVNKRFVRVTF-TPGKTPVD--------------GQYVW-FNIGSVDTFERNLETLQQELGIEGENRVPVVYIAE 247 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23534 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23534_La_Tanjil_v1.0 ID=rna-TanjilR_23534_La_Tanjil_v1.0; Name=rna-TanjilR_23534; organism=Lupinus angustifolius; type=mRNA; length=6160bpback to top protein sequence of rna-TanjilR_23534_La_Tanjil_v1.0 >rna-TanjilR_23534_La_Tanjil_v1.0 ID=rna-TanjilR_23534_La_Tanjil_v1.0; Name=rna-TanjilR_23534_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=1022bpback to top mRNA from alignment at Chr_LG08-CM007368.1:24054752..24060911- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23534_La_Tanjil_v1.0 ID=rna-TanjilR_23534_La_Tanjil_v1.0; Name=rna-TanjilR_23534; organism=Lupinus angustifolius; type=mRNA; length=6160bp; location=Sequence derived from: Chr_LG08-CM007368.1:24054752..24060911- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24054752..24060911- >rna-TanjilR_23534_La_Tanjil_v1.0 ID=rna-TanjilR_23534_La_Tanjil_v1.0; Name=rna-TanjilR_23534; organism=Lupinus angustifolius; type=CDS; length=3069bp; location=Sequence derived from: Chr_LG08-CM007368.1:24054752..24060911- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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