rna-TanjilR_23531

Transcript Overview
Namerna-TanjilR_23531
Unique Namerna-TanjilR_23531_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length4373
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG08-CM007368.1supercontigChr_LG08-CM007368.1:24097379..24101751 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL254Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL595Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1271Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1332Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1336Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1340Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1343Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1392Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1451Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1096Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1148Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1285Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1340Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0946Pisum sativum Cameor genome v1aPisum sativum
anpsR0947Pisum sativum Cameor genome v1aPisum sativum
anpsR0965Pisum sativum Cameor genome v1aPisum sativum
anpsR0973Pisum sativum Cameor genome v1aPisum sativum
anpvR1275Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1286Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1084Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1110Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1274Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1079Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1115Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1126Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1117Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1179Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1165Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1192Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1178Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1072Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1089Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1036Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1065Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1223Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1234Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1240Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR1001Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR1047Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1060Cicer arietinum
ancarR1105Cicer arietinum
anccaR1056Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1080Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1276Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1283Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1155Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1188Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1266Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1275Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1283Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1275Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR1045Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1072Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1313Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1340Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vum_07G00374.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.1g032080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cc_v2.0_09239.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.L008243.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan05g192400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigst.07G035000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cr_01116.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
jg43411.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun05g261200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_23520.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun05g261200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va05G051750.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_02637Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr05.2459Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.07G047100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058918047.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_014640971.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.1g021600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0788800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr05.1001061Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_004486923.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-KK1_013923Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_17212Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_03321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_05912Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_23531gene-TanjilG_23531_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23531rna-TanjilR_23531_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_23531_La_Tanjil_v1.0rna-TanjilR_23531_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101629..24101751rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101629..24101751Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101285..24101455rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101285..24101455Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101039..24101191rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101039..24101191Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100830..24100881rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100830..24100881Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100698..24100756rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100698..24100756Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100418..24100543rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100418..24100543Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098745..24098885rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098745..24098885Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098002..24098065rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098002..24098065Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097720..24097883rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097720..24097883Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097499..24097582rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097499..24097582Lupinus angustifoliusCDS
rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097379..24097402rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097379..24097402Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101629..24101751rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101629..24101751Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101285..24101455rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101285..24101455Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101039..24101191rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101039..24101191Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100830..24100881rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100830..24100881Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100698..24100756rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100698..24100756Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100418..24100543rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100418..24100543Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098745..24098885rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098745..24098885Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098002..24098065rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098002..24098065Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097720..24097883rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097720..24097883Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097499..24097582rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097499..24097582Lupinus angustifoliusexon
rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097379..24097402rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097379..24097402Lupinus angustifoliusexon


Homology
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23531 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004855Transcription factor IIA, alpha/beta subunitSMARTSM01371TFIIA_2coord: 8..386
e-value: 2.6E-91
score: 319.4
IPR004855Transcription factor IIA, alpha/beta subunitPFAMPF03153TFIIAcoord: 9..200
e-value: 3.4E-12
score: 47.1
coord: 252..385
e-value: 5.9E-31
score: 108.9
NoneNo IPR availableGENE3D1.10.287.100coord: 1..55
e-value: 7.9E-17
score: 62.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..335
NoneNo IPR availableCDDcd07976TFIIA_alpha_beta_likecoord: 337..386
e-value: 1.5011E-26
score: 99.9063
NoneNo IPR availableSUPERFAMILY47396Transcription factor IIA (TFIIA), alpha-helical domaincoord: 5..47
IPR009088Transcription factor IIA, beta-barrelGENE3D2.30.18.10coord: 328..386
e-value: 8.4E-25
score: 87.9
IPR009088Transcription factor IIA, beta-barrelSUPERFAMILY50784Transcription factor IIA (TFIIA), beta-barrel domaincoord: 329..386

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_23531_La_Tanjil_v1.0 ID=rna-TanjilR_23531_La_Tanjil_v1.0; Name=rna-TanjilR_23531; organism=Lupinus angustifolius; type=mRNA; length=4373bp
ATGGCGGCTTCCACCACCAGTCAGGTATATATTCAGGTTATCGAGGATGT
CGTCAACAAGGTTCGAGATGAGTTCGGCAATAACGGTGGTCCCGGCGATG
AAGTTCTCAAGGAGTTTCAAGCTGTAATTTCTCTTATTCTTTCCAATCTA
TTTGATTCCACTCATCCATGTTATCTGCATGTATAGATGGTTGAAAATTG
TATAGTTAAATTGATATATTATCTGATGGTTGATTTAGGGCTTGGATCTG
TGTTTGTGTGCTCAAATCTTTGTATTTTTGTTGATAATTTATTTAGATGT
GGGAATCAAAGATGATCCAAGCTGGTGTTATTCTTGGTCCCATAGTAAGG
TCCAGTGCACCTAAGCCAACGTCCGGAGGTCCAATTACTCCGGTTCACGA
TCTCAACATGCCTTACGAGGCGACAGAGGAGTATGAAACTCCCACAGCTG
AAATACTTTTCCCTCCTGTGAGTTTCTACTTTCTAGCAACTAAACAAAAA
AACGTGTGAAGTTATGAGTTGAAATTGTTGTATTGATGATATTGACTTTT
GAGTGTACAGACACCAGCGCAGACTCCTATTCCAACTCCTCTACCAGGAA
CTGTGGATAACTCGATGTATAACATTCCTACTGGACCTAGTGACTACTCA
TCTTCTGGAAATGGTTCTGTGGGAAATACGGAGATGAAAGGTGGAAGACC
TAGTGCATACATGGTAAACCTCATTTTGTGACTCCATGGTACATATGATT
GATAATATTCGAGTAGCTGTCTATTAGAGCAAATAAACTCTGCTGCTACT
TAAACCATGTGCATGGAACTTATTTTCTTTTAGATGTGTGTATTGATCTT
CTCCATACAATCTTGTACAGCCACCTCCTTCTCCATGGATGAACCAGAGG
CCTGCACTTGACGTCAATGTTGGTGAGTTCCATTCAAATTTATGACGTAG
TGATTAGTAGAATGGATTTGCATTAACGACTGTGTATTACTTTAGCTTAT
GTGGAAGGGCGGGATGAGGCAGGCAGAGGAACTTCTAATCAACCTCTGGA
ACAGGTAAGGAAGCTGATGAGGTCTTTTAGAAATTTGTTTGTTGTCAACT
TGAAGAGCTCTTGCGTTAGTCTCTTTCATGAAGGCAGAGAAATAGTTCCT
TTTTTTTCTATGTGCCTGCCTTGAGCATCCTCTCAAATTTAAAAATGGAA
ACATCCAGGACTTCTTCACAACGAATGCAGGAAAGCGAAAACGTGATGAG
TTTGCTTCACAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGC
AGGAGATGTTGCACCTGGAGTTTTTGAAATTGAGGTACAGCTTTCATATT
ATTAAATATCCTTGGGATAGTTTGTTGATTTATATTAGCTTTGTACTTGC
ATATCATTTGTGAGTATTTCTGAAATGATGTTAATAATATTTTTTTGTAA
ATGTGTTTGTGGTGTGTGAGCACGACCAAGAGGAACTGTAGTAAGATCCT
GGTTTCATAGCATTTAATCACCTTTGTTGTCTGTTCTGATGGATATCCTT
TTTCCATCCGTTCAAGCAATATCATGTTTAAATCATATCTTTGAGTCACA
GTTTATTTGACACAAAAGTTGGCTTGAACTTAAAGGTTCTAAAACTGTCT
AAATGTTGACAAACTGAAAACCGAAAAGACAGTGTTATTGTATGCTGAAA
AAATTGTCATACCATGGGAAGTGGTGGAATGAGGGAGATGGGGCAAGGGG
GACTCAGATTCTCTGAAGTTTATTCAAACATGGTGGTACATAGTGGCAGT
TTACCATGAGCACAAATGGATAATGATTTACTTGACAATTACATCAAGAA
ACAAGACTGACAAAGCCTCACCACTATGGAAGAAAAGTATCATAGTTTTT
GTGGTGAAATATGTGAATTTACATTAATTTGAGGTCAAATTGTTAACATG
AAATGTCTCTCCCTGTTCAACTGTACCTATATATTGATTGTTCACACAAA
TGCCATCTACTTCTCCCTCCCTCTCTCTTATCATGGCTATTTCTTATGTT
CTTTGGATTTCCTGCTTGCATCTCTTTCTTCTGCACTGTAGCATTGTTCT
AGAGTGTTGTCAGTCTACAAAGTAGATTTTTACTTTCCAGATCTTCAATT
ATGGTTATACGACGTTAAACAATTAGTCAACATGATTAGAAATAGATCAT
TGAGGTTTGAGGCGCCCTTTTTAGAAACAATTATCCGTGCATTGAGGCAC
CCTTTATTTAGTATAATTGAAATAGATCATGCCTTTATTTTGAAACTTGC
ACCAATTAAGGTTGAGATGTTCAGATTTAATTTTAGACAAAGGTGAAATA
TTTGTTAACTCACTAGATACCACTGCGTCATATGTTCTCTTGACAATGAA
ATCATGTAATTGATAAGAATATAAAAGTTTTCCTCAGTTGGGTTCTGAAT
CTTTTCTTCTATGTTTAGTTTCATTCAGCTGCTCTTAAACAGAAGTTTTT
CTGTCCTGTTATCTTTTTGGGTTGATAAAATTCTTTAGAGATATGGATCT
TTCCAAACATTCAGTACTAGCTTTTCTAATCAACTGTTGCAAGATCGCCT
TTGTTTGACAAGCAATCAGGTTGCACTTTCCAACTGTTGCAAGCACGATC
CCAGTGACTTGCTGCATGTATATTTGCTCAGATGGTCTCTAAACAGTATA
GATCAGAGTCTTCTTTGTCTGCCCATTATTGTAGATTGTTCTTTCAGGTT
CTACATTACAGTAGTGCAGATGTGCATGCATATATTGATGATTGTCTTTT
TGTTGACTTGCATGGTTAATGGAAAGGTTTGTTCATTTACTGAACTGGTG
GATATAAATCTTTCAGGTGTATGGAGGGAGCATCTCTGTTGATGCGGGTC
ACTCTACAAAAGGAAAAATGGCAGCAAATTTGGAGAGGCCAGCCTCTCAG
ATTCCTCAACTTGATGGACCAATTCCTTATGAAGATGATGTGCTTTCTAC
CCCAAATGTGAGTAGGATTTACCTTTCCCTCTTCCCTGCTCTCGTAGAAT
CTTGTAACTTCATCCCTACTTACAGATACACATTTTGTACATATTAAATA
TATCATGACTTGGCCCTACTTTTGTTAGCTGAAAACTCCAATAGTTTGGG
TGTTATATTTAGCTTAGCCCCCTTAATAAAATTGGATGGTGTTTCCATTT
CCATAGTCAATAATTCTGAGCTTGCTAATTTTTTAAACTTGTAATTTCAA
TGGTACTCATAGTCTTGGTTTCCCTATTGATAAACAGGACTATATAACCT
TATTCTATGGAAATACACAACATTTAAGTGATTTAATGAATTGAAATAAG
CATTTAAAATTCTTAAGTGATTTCTTTTTCCAGTCAAGATGGATGTTGTT
GCATTTTATATGATTTGGCACCTGAACTAATTGCTTACTGAACACTGTGA
TATGCTAGATATATTATTACTTGGCACTACTTTTGTTACTTGAAACTCCA
ATTGATTGGGTAGCATGATGTTTTGCCCCCTCCAAATAAATAGATTGGAT
GGTGGTACCAATTCCAAGTTCAATTATTTTGAGCTTGCTAATCTTTTAAA
CTAAAGTTTCAATGGTGTTTCATTTGATATTTTCCTCACCAAGTCTTGCA
ATCCAATCTTATTGTTTTTATTCCCCCTTGCTGCAGATATACAATTATGG
GGGAGTGTACAATGAAGACTACAATATTGCTAATACACCAGCTCCTCATG
GTAAATTGAGAACTTACATATGTTAATTATGTATGTGTCTCATCATACAC
ACACACACACACACATATATATTGCAAATGTTGCTAATACGTTCTCCCCA
CCCACTGTATTTTATTAGAAGCACCTGTAAGTACCCCAGCTCTTGTTGCT
CAAAATGAGGTTGAAGAAGATGATGATGATGATGAGCCCCCGCTAAATGA
AAATGATGATGATGATTTGGATGATTTGGAGCAAGGAGATGAGCAAAATA
CACATCATCTTGTTTTGGCTCAGTTTGACAAGGTGACAATCTCTTTCCTC
CACTTTCTGTGAATTAGGCGTTGAGTGCTGTAGTAATATATGATATGGTC
ATATATTTAATGGCTCACAGTTGGAGAACCACTTCTTGAGACTAATCGAA
TATCTTCCTACAAATTTAGGTGACACGTACCAAGAGCAGGTGGAAGTGCA
CACTAAAGGATGGCATCATGCACATCAATAATAAGGACATTCTCTTTAAC
AAGGTTTGATTGTCTTGAAGGGAAAGAAACAGTAATATGTTCTTATTATT
TCTGTTTAGCTCATGAAATTTTGATGGATGATACTACGCTCTTATGCAGG
CAACTGGAGAATTTGACTTCTGA
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protein sequence of rna-TanjilR_23531_La_Tanjil_v1.0

>rna-TanjilR_23531_La_Tanjil_v1.0 ID=rna-TanjilR_23531_La_Tanjil_v1.0; Name=rna-TanjilR_23531_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=386bp
MAASTTSQVYIQVIEDVVNKVRDEFGNNGGPGDEVLKEFQAMWESKMIQA
GVILGPIVRSSAPKPTSGGPITPVHDLNMPYEATEEYETPTAEILFPPTP
AQTPIPTPLPGTVDNSMYNIPTGPSDYSSSGNGSVGNTEMKGGRPSAYMP
PPSPWMNQRPALDVNVAYVEGRDEAGRGTSNQPLEQDFFTTNAGKRKRDE
FASQYNAGGYIPQQDGAGDVAPGVFEIEVYGGSISVDAGHSTKGKMAANL
ERPASQIPQLDGPIPYEDDVLSTPNIYNYGGVYNEDYNIANTPAPHEAPV
STPALVAQNEVEEDDDDDEPPLNENDDDDLDDLEQGDEQNTHHLVLAQFD
KVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
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mRNA from alignment at Chr_LG08-CM007368.1:24097379..24101751-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_23531_La_Tanjil_v1.0 ID=rna-TanjilR_23531_La_Tanjil_v1.0; Name=rna-TanjilR_23531; organism=Lupinus angustifolius; type=mRNA; length=4373bp; location=Sequence derived from: Chr_LG08-CM007368.1:24097379..24101751- (Lupinus angustifolius
ATGGCGGCTTCCACCACCAGTCAGGTATATATTCAGGTTATCGAGGATGT
CGTCAACAAGGTTCGAGATGAGTTCGGCAATAACGGTGGTCCCGGCGATG
AAGTTCTCAAGGAGTTTCAAGCTGTAATTTCTCTTATTCTTTCCAATCTA
TTTGATTCCACTCATCCATGTTATCTGCATGTATAGATGGTTGAAAATTG
TATAGTTAAATTGATATATTATCTGATGGTTGATTTAGGGCTTGGATCTG
TGTTTGTGTGCTCAAATCTTTGTATTTTTGTTGATAATTTATTTAGATGT
GGGAATCAAAGATGATCCAAGCTGGTGTTATTCTTGGTCCCATAGTAAGG
TCCAGTGCACCTAAGCCAACGTCCGGAGGTCCAATTACTCCGGTTCACGA
TCTCAACATGCCTTACGAGGCGACAGAGGAGTATGAAACTCCCACAGCTG
AAATACTTTTCCCTCCTGTGAGTTTCTACTTTCTAGCAACTAAACAAAAA
AACGTGTGAAGTTATGAGTTGAAATTGTTGTATTGATGATATTGACTTTT
GAGTGTACAGACACCAGCGCAGACTCCTATTCCAACTCCTCTACCAGGAA
CTGTGGATAACTCGATGTATAACATTCCTACTGGACCTAGTGACTACTCA
TCTTCTGGAAATGGTTCTGTGGGAAATACGGAGATGAAAGGTGGAAGACC
TAGTGCATACATGGTAAACCTCATTTTGTGACTCCATGGTACATATGATT
GATAATATTCGAGTAGCTGTCTATTAGAGCAAATAAACTCTGCTGCTACT
TAAACCATGTGCATGGAACTTATTTTCTTTTAGATGTGTGTATTGATCTT
CTCCATACAATCTTGTACAGCCACCTCCTTCTCCATGGATGAACCAGAGG
CCTGCACTTGACGTCAATGTTGGTGAGTTCCATTCAAATTTATGACGTAG
TGATTAGTAGAATGGATTTGCATTAACGACTGTGTATTACTTTAGCTTAT
GTGGAAGGGCGGGATGAGGCAGGCAGAGGAACTTCTAATCAACCTCTGGA
ACAGGTAAGGAAGCTGATGAGGTCTTTTAGAAATTTGTTTGTTGTCAACT
TGAAGAGCTCTTGCGTTAGTCTCTTTCATGAAGGCAGAGAAATAGTTCCT
TTTTTTTCTATGTGCCTGCCTTGAGCATCCTCTCAAATTTAAAAATGGAA
ACATCCAGGACTTCTTCACAACGAATGCAGGAAAGCGAAAACGTGATGAG
TTTGCTTCACAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGC
AGGAGATGTTGCACCTGGAGTTTTTGAAATTGAGGTACAGCTTTCATATT
ATTAAATATCCTTGGGATAGTTTGTTGATTTATATTAGCTTTGTACTTGC
ATATCATTTGTGAGTATTTCTGAAATGATGTTAATAATATTTTTTTGTAA
ATGTGTTTGTGGTGTGTGAGCACGACCAAGAGGAACTGTAGTAAGATCCT
GGTTTCATAGCATTTAATCACCTTTGTTGTCTGTTCTGATGGATATCCTT
TTTCCATCCGTTCAAGCAATATCATGTTTAAATCATATCTTTGAGTCACA
GTTTATTTGACACAAAAGTTGGCTTGAACTTAAAGGTTCTAAAACTGTCT
AAATGTTGACAAACTGAAAACCGAAAAGACAGTGTTATTGTATGCTGAAA
AAATTGTCATACCATGGGAAGTGGTGGAATGAGGGAGATGGGGCAAGGGG
GACTCAGATTCTCTGAAGTTTATTCAAACATGGTGGTACATAGTGGCAGT
TTACCATGAGCACAAATGGATAATGATTTACTTGACAATTACATCAAGAA
ACAAGACTGACAAAGCCTCACCACTATGGAAGAAAAGTATCATAGTTTTT
GTGGTGAAATATGTGAATTTACATTAATTTGAGGTCAAATTGTTAACATG
AAATGTCTCTCCCTGTTCAACTGTACCTATATATTGATTGTTCACACAAA
TGCCATCTACTTCTCCCTCCCTCTCTCTTATCATGGCTATTTCTTATGTT
CTTTGGATTTCCTGCTTGCATCTCTTTCTTCTGCACTGTAGCATTGTTCT
AGAGTGTTGTCAGTCTACAAAGTAGATTTTTACTTTCCAGATCTTCAATT
ATGGTTATACGACGTTAAACAATTAGTCAACATGATTAGAAATAGATCAT
TGAGGTTTGAGGCGCCCTTTTTAGAAACAATTATCCGTGCATTGAGGCAC
CCTTTATTTAGTATAATTGAAATAGATCATGCCTTTATTTTGAAACTTGC
ACCAATTAAGGTTGAGATGTTCAGATTTAATTTTAGACAAAGGTGAAATA
TTTGTTAACTCACTAGATACCACTGCGTCATATGTTCTCTTGACAATGAA
ATCATGTAATTGATAAGAATATAAAAGTTTTCCTCAGTTGGGTTCTGAAT
CTTTTCTTCTATGTTTAGTTTCATTCAGCTGCTCTTAAACAGAAGTTTTT
CTGTCCTGTTATCTTTTTGGGTTGATAAAATTCTTTAGAGATATGGATCT
TTCCAAACATTCAGTACTAGCTTTTCTAATCAACTGTTGCAAGATCGCCT
TTGTTTGACAAGCAATCAGGTTGCACTTTCCAACTGTTGCAAGCACGATC
CCAGTGACTTGCTGCATGTATATTTGCTCAGATGGTCTCTAAACAGTATA
GATCAGAGTCTTCTTTGTCTGCCCATTATTGTAGATTGTTCTTTCAGGTT
CTACATTACAGTAGTGCAGATGTGCATGCATATATTGATGATTGTCTTTT
TGTTGACTTGCATGGTTAATGGAAAGGTTTGTTCATTTACTGAACTGGTG
GATATAAATCTTTCAGGTGTATGGAGGGAGCATCTCTGTTGATGCGGGTC
ACTCTACAAAAGGAAAAATGGCAGCAAATTTGGAGAGGCCAGCCTCTCAG
ATTCCTCAACTTGATGGACCAATTCCTTATGAAGATGATGTGCTTTCTAC
CCCAAATGTGAGTAGGATTTACCTTTCCCTCTTCCCTGCTCTCGTAGAAT
CTTGTAACTTCATCCCTACTTACAGATACACATTTTGTACATATTAAATA
TATCATGACTTGGCCCTACTTTTGTTAGCTGAAAACTCCAATAGTTTGGG
TGTTATATTTAGCTTAGCCCCCTTAATAAAATTGGATGGTGTTTCCATTT
CCATAGTCAATAATTCTGAGCTTGCTAATTTTTTAAACTTGTAATTTCAA
TGGTACTCATAGTCTTGGTTTCCCTATTGATAAACAGGACTATATAACCT
TATTCTATGGAAATACACAACATTTAAGTGATTTAATGAATTGAAATAAG
CATTTAAAATTCTTAAGTGATTTCTTTTTCCAGTCAAGATGGATGTTGTT
GCATTTTATATGATTTGGCACCTGAACTAATTGCTTACTGAACACTGTGA
TATGCTAGATATATTATTACTTGGCACTACTTTTGTTACTTGAAACTCCA
ATTGATTGGGTAGCATGATGTTTTGCCCCCTCCAAATAAATAGATTGGAT
GGTGGTACCAATTCCAAGTTCAATTATTTTGAGCTTGCTAATCTTTTAAA
CTAAAGTTTCAATGGTGTTTCATTTGATATTTTCCTCACCAAGTCTTGCA
ATCCAATCTTATTGTTTTTATTCCCCCTTGCTGCAGATATACAATTATGG
GGGAGTGTACAATGAAGACTACAATATTGCTAATACACCAGCTCCTCATG
GTAAATTGAGAACTTACATATGTTAATTATGTATGTGTCTCATCATACAC
ACACACACACACACATATATATTGCAAATGTTGCTAATACGTTCTCCCCA
CCCACTGTATTTTATTAGAAGCACCTGTAAGTACCCCAGCTCTTGTTGCT
CAAAATGAGGTTGAAGAAGATGATGATGATGATGAGCCCCCGCTAAATGA
AAATGATGATGATGATTTGGATGATTTGGAGCAAGGAGATGAGCAAAATA
CACATCATCTTGTTTTGGCTCAGTTTGACAAGGTGACAATCTCTTTCCTC
CACTTTCTGTGAATTAGGCGTTGAGTGCTGTAGTAATATATGATATGGTC
ATATATTTAATGGCTCACAGTTGGAGAACCACTTCTTGAGACTAATCGAA
TATCTTCCTACAAATTTAGGTGACACGTACCAAGAGCAGGTGGAAGTGCA
CACTAAAGGATGGCATCATGCACATCAATAATAAGGACATTCTCTTTAAC
AAGGTTTGATTGTCTTGAAGGGAAAGAAACAGTAATATGTTCTTATTATT
TCTGTTTAGCTCATGAAATTTTGATGGATGATACTACGCTCTTATGCAGG
CAACTGGAGAATTTGACTTCTGA
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Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24097379..24101751-

>rna-TanjilR_23531_La_Tanjil_v1.0 ID=rna-TanjilR_23531_La_Tanjil_v1.0; Name=rna-TanjilR_23531; organism=Lupinus angustifolius; type=CDS; length=1161bp; location=Sequence derived from: Chr_LG08-CM007368.1:24097379..24101751- (Lupinus angustifolius
ATGGCGGCTTCCACCACCAGTCAGGTATATATTCAGGTTATCGAGGATGT
CGTCAACAAGGTTCGAGATGAGTTCGGCAATAACGGTGGTCCCGGCGATG
AAGTTCTCAAGGAGTTTCAAGCTATGTGGGAATCAAAGATGATCCAAGCT
GGTGTTATTCTTGGTCCCATAGTAAGGTCCAGTGCACCTAAGCCAACGTC
CGGAGGTCCAATTACTCCGGTTCACGATCTCAACATGCCTTACGAGGCGA
CAGAGGAGTATGAAACTCCCACAGCTGAAATACTTTTCCCTCCTACACCA
GCGCAGACTCCTATTCCAACTCCTCTACCAGGAACTGTGGATAACTCGAT
GTATAACATTCCTACTGGACCTAGTGACTACTCATCTTCTGGAAATGGTT
CTGTGGGAAATACGGAGATGAAAGGTGGAAGACCTAGTGCATACATGCCA
CCTCCTTCTCCATGGATGAACCAGAGGCCTGCACTTGACGTCAATGTTGC
TTATGTGGAAGGGCGGGATGAGGCAGGCAGAGGAACTTCTAATCAACCTC
TGGAACAGGACTTCTTCACAACGAATGCAGGAAAGCGAAAACGTGATGAG
TTTGCTTCACAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGC
AGGAGATGTTGCACCTGGAGTTTTTGAAATTGAGGTGTATGGAGGGAGCA
TCTCTGTTGATGCGGGTCACTCTACAAAAGGAAAAATGGCAGCAAATTTG
GAGAGGCCAGCCTCTCAGATTCCTCAACTTGATGGACCAATTCCTTATGA
AGATGATGTGCTTTCTACCCCAAATATATACAATTATGGGGGAGTGTACA
ATGAAGACTACAATATTGCTAATACACCAGCTCCTCATGAAGCACCTGTA
AGTACCCCAGCTCTTGTTGCTCAAAATGAGGTTGAAGAAGATGATGATGA
TGATGAGCCCCCGCTAAATGAAAATGATGATGATGATTTGGATGATTTGG
AGCAAGGAGATGAGCAAAATACACATCATCTTGTTTTGGCTCAGTTTGAC
AAGGTGACACGTACCAAGAGCAGGTGGAAGTGCACACTAAAGGATGGCAT
CATGCACATCAATAATAAGGACATTCTCTTTAACAAGGCAACTGGAGAAT
TTGACTTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004855TFIIA_asu/bsu
IPR009088TFIIA_b-brl
Vocabulary: Cellular Component
TermDefinition
GO:0005672transcription factor TFIIA complex
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation at RNA polymerase II promoter