Transcript Overview
| Name | rna-TanjilR_23531 |
|---|
| Unique Name | rna-TanjilR_23531_La_Tanjil_v1.0 |
|---|
| Type | mRNA |
|---|
| Organism | Lupinus angustifolius (blue lupin) |
|---|
| Sequence length | 4373 |
|---|
| Product | hypothetical protein |
|---|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_23531 | rna-TanjilR_23531_La_Tanjil_v1.0-protein | Lupinus angustifolius | polypeptide |
| rna-TanjilR_23531_La_Tanjil_v1.0 | rna-TanjilR_23531_La_Tanjil_v1.0 | Lupinus angustifolius | polypeptide |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101629..24101751 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101629..24101751 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101285..24101455 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101285..24101455 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101039..24101191 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101039..24101191 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100830..24100881 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100830..24100881 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100698..24100756 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100698..24100756 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100418..24100543 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100418..24100543 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098745..24098885 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098745..24098885 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098002..24098065 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098002..24098065 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097720..24097883 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097720..24097883 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097499..24097582 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097499..24097582 | Lupinus angustifolius | CDS |
| rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097379..24097402 | rna-TanjilR_23531_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097379..24097402 | Lupinus angustifolius | CDS |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101629..24101751 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101629..24101751 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101285..24101455 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101285..24101455 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101039..24101191 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24101039..24101191 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100830..24100881 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100830..24100881 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100698..24100756 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100698..24100756 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100418..24100543 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24100418..24100543 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098745..24098885 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098745..24098885 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098002..24098065 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24098002..24098065 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097720..24097883 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097720..24097883 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097499..24097582 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097499..24097582 | Lupinus angustifolius | exon |
| rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097379..24097402 | rna-TanjilR_23531_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24097379..24097402 | Lupinus angustifolius | exon |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR004855 | Transcription factor IIA, alpha/beta subunit | SMART | SM01371 | TFIIA_2 | coord: 8..386
e-value: 2.6E-91
score: 319.4 |
| IPR004855 | Transcription factor IIA, alpha/beta subunit | PFAM | PF03153 | TFIIA | coord: 9..200
e-value: 3.4E-12
score: 47.1
coord: 252..385
e-value: 5.9E-31
score: 108.9 |
| None | No IPR available | GENE3D | 1.10.287.100 | | coord: 1..55
e-value: 7.9E-17
score: 62.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 309..335 |
| None | No IPR available | CDD | cd07976 | TFIIA_alpha_beta_like | coord: 337..386
e-value: 1.5011E-26
score: 99.9063 |
| None | No IPR available | SUPERFAMILY | 47396 | Transcription factor IIA (TFIIA), alpha-helical domain | coord: 5..47 |
| IPR009088 | Transcription factor IIA, beta-barrel | GENE3D | 2.30.18.10 | | coord: 328..386
e-value: 8.4E-25
score: 87.9 |
| IPR009088 | Transcription factor IIA, beta-barrel | SUPERFAMILY | 50784 | Transcription factor IIA (TFIIA), beta-barrel domain | coord: 329..386 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23531_La_Tanjil_v1.0 ID=rna-TanjilR_23531_La_Tanjil_v1.0; Name=rna-TanjilR_23531; organism=Lupinus angustifolius; type=mRNA; length=4373bp
ATGGCGGCTTCCACCACCAGTCAGGTATATATTCAGGTTATCGAGGATGT
CGTCAACAAGGTTCGAGATGAGTTCGGCAATAACGGTGGTCCCGGCGATG
AAGTTCTCAAGGAGTTTCAAGCTGTAATTTCTCTTATTCTTTCCAATCTA
TTTGATTCCACTCATCCATGTTATCTGCATGTATAGATGGTTGAAAATTG
TATAGTTAAATTGATATATTATCTGATGGTTGATTTAGGGCTTGGATCTG
TGTTTGTGTGCTCAAATCTTTGTATTTTTGTTGATAATTTATTTAGATGT
GGGAATCAAAGATGATCCAAGCTGGTGTTATTCTTGGTCCCATAGTAAGG
TCCAGTGCACCTAAGCCAACGTCCGGAGGTCCAATTACTCCGGTTCACGA
TCTCAACATGCCTTACGAGGCGACAGAGGAGTATGAAACTCCCACAGCTG
AAATACTTTTCCCTCCTGTGAGTTTCTACTTTCTAGCAACTAAACAAAAA
AACGTGTGAAGTTATGAGTTGAAATTGTTGTATTGATGATATTGACTTTT
GAGTGTACAGACACCAGCGCAGACTCCTATTCCAACTCCTCTACCAGGAA
CTGTGGATAACTCGATGTATAACATTCCTACTGGACCTAGTGACTACTCA
TCTTCTGGAAATGGTTCTGTGGGAAATACGGAGATGAAAGGTGGAAGACC
TAGTGCATACATGGTAAACCTCATTTTGTGACTCCATGGTACATATGATT
GATAATATTCGAGTAGCTGTCTATTAGAGCAAATAAACTCTGCTGCTACT
TAAACCATGTGCATGGAACTTATTTTCTTTTAGATGTGTGTATTGATCTT
CTCCATACAATCTTGTACAGCCACCTCCTTCTCCATGGATGAACCAGAGG
CCTGCACTTGACGTCAATGTTGGTGAGTTCCATTCAAATTTATGACGTAG
TGATTAGTAGAATGGATTTGCATTAACGACTGTGTATTACTTTAGCTTAT
GTGGAAGGGCGGGATGAGGCAGGCAGAGGAACTTCTAATCAACCTCTGGA
ACAGGTAAGGAAGCTGATGAGGTCTTTTAGAAATTTGTTTGTTGTCAACT
TGAAGAGCTCTTGCGTTAGTCTCTTTCATGAAGGCAGAGAAATAGTTCCT
TTTTTTTCTATGTGCCTGCCTTGAGCATCCTCTCAAATTTAAAAATGGAA
ACATCCAGGACTTCTTCACAACGAATGCAGGAAAGCGAAAACGTGATGAG
TTTGCTTCACAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGC
AGGAGATGTTGCACCTGGAGTTTTTGAAATTGAGGTACAGCTTTCATATT
ATTAAATATCCTTGGGATAGTTTGTTGATTTATATTAGCTTTGTACTTGC
ATATCATTTGTGAGTATTTCTGAAATGATGTTAATAATATTTTTTTGTAA
ATGTGTTTGTGGTGTGTGAGCACGACCAAGAGGAACTGTAGTAAGATCCT
GGTTTCATAGCATTTAATCACCTTTGTTGTCTGTTCTGATGGATATCCTT
TTTCCATCCGTTCAAGCAATATCATGTTTAAATCATATCTTTGAGTCACA
GTTTATTTGACACAAAAGTTGGCTTGAACTTAAAGGTTCTAAAACTGTCT
AAATGTTGACAAACTGAAAACCGAAAAGACAGTGTTATTGTATGCTGAAA
AAATTGTCATACCATGGGAAGTGGTGGAATGAGGGAGATGGGGCAAGGGG
GACTCAGATTCTCTGAAGTTTATTCAAACATGGTGGTACATAGTGGCAGT
TTACCATGAGCACAAATGGATAATGATTTACTTGACAATTACATCAAGAA
ACAAGACTGACAAAGCCTCACCACTATGGAAGAAAAGTATCATAGTTTTT
GTGGTGAAATATGTGAATTTACATTAATTTGAGGTCAAATTGTTAACATG
AAATGTCTCTCCCTGTTCAACTGTACCTATATATTGATTGTTCACACAAA
TGCCATCTACTTCTCCCTCCCTCTCTCTTATCATGGCTATTTCTTATGTT
CTTTGGATTTCCTGCTTGCATCTCTTTCTTCTGCACTGTAGCATTGTTCT
AGAGTGTTGTCAGTCTACAAAGTAGATTTTTACTTTCCAGATCTTCAATT
ATGGTTATACGACGTTAAACAATTAGTCAACATGATTAGAAATAGATCAT
TGAGGTTTGAGGCGCCCTTTTTAGAAACAATTATCCGTGCATTGAGGCAC
CCTTTATTTAGTATAATTGAAATAGATCATGCCTTTATTTTGAAACTTGC
ACCAATTAAGGTTGAGATGTTCAGATTTAATTTTAGACAAAGGTGAAATA
TTTGTTAACTCACTAGATACCACTGCGTCATATGTTCTCTTGACAATGAA
ATCATGTAATTGATAAGAATATAAAAGTTTTCCTCAGTTGGGTTCTGAAT
CTTTTCTTCTATGTTTAGTTTCATTCAGCTGCTCTTAAACAGAAGTTTTT
CTGTCCTGTTATCTTTTTGGGTTGATAAAATTCTTTAGAGATATGGATCT
TTCCAAACATTCAGTACTAGCTTTTCTAATCAACTGTTGCAAGATCGCCT
TTGTTTGACAAGCAATCAGGTTGCACTTTCCAACTGTTGCAAGCACGATC
CCAGTGACTTGCTGCATGTATATTTGCTCAGATGGTCTCTAAACAGTATA
GATCAGAGTCTTCTTTGTCTGCCCATTATTGTAGATTGTTCTTTCAGGTT
CTACATTACAGTAGTGCAGATGTGCATGCATATATTGATGATTGTCTTTT
TGTTGACTTGCATGGTTAATGGAAAGGTTTGTTCATTTACTGAACTGGTG
GATATAAATCTTTCAGGTGTATGGAGGGAGCATCTCTGTTGATGCGGGTC
ACTCTACAAAAGGAAAAATGGCAGCAAATTTGGAGAGGCCAGCCTCTCAG
ATTCCTCAACTTGATGGACCAATTCCTTATGAAGATGATGTGCTTTCTAC
CCCAAATGTGAGTAGGATTTACCTTTCCCTCTTCCCTGCTCTCGTAGAAT
CTTGTAACTTCATCCCTACTTACAGATACACATTTTGTACATATTAAATA
TATCATGACTTGGCCCTACTTTTGTTAGCTGAAAACTCCAATAGTTTGGG
TGTTATATTTAGCTTAGCCCCCTTAATAAAATTGGATGGTGTTTCCATTT
CCATAGTCAATAATTCTGAGCTTGCTAATTTTTTAAACTTGTAATTTCAA
TGGTACTCATAGTCTTGGTTTCCCTATTGATAAACAGGACTATATAACCT
TATTCTATGGAAATACACAACATTTAAGTGATTTAATGAATTGAAATAAG
CATTTAAAATTCTTAAGTGATTTCTTTTTCCAGTCAAGATGGATGTTGTT
GCATTTTATATGATTTGGCACCTGAACTAATTGCTTACTGAACACTGTGA
TATGCTAGATATATTATTACTTGGCACTACTTTTGTTACTTGAAACTCCA
ATTGATTGGGTAGCATGATGTTTTGCCCCCTCCAAATAAATAGATTGGAT
GGTGGTACCAATTCCAAGTTCAATTATTTTGAGCTTGCTAATCTTTTAAA
CTAAAGTTTCAATGGTGTTTCATTTGATATTTTCCTCACCAAGTCTTGCA
ATCCAATCTTATTGTTTTTATTCCCCCTTGCTGCAGATATACAATTATGG
GGGAGTGTACAATGAAGACTACAATATTGCTAATACACCAGCTCCTCATG
GTAAATTGAGAACTTACATATGTTAATTATGTATGTGTCTCATCATACAC
ACACACACACACACATATATATTGCAAATGTTGCTAATACGTTCTCCCCA
CCCACTGTATTTTATTAGAAGCACCTGTAAGTACCCCAGCTCTTGTTGCT
CAAAATGAGGTTGAAGAAGATGATGATGATGATGAGCCCCCGCTAAATGA
AAATGATGATGATGATTTGGATGATTTGGAGCAAGGAGATGAGCAAAATA
CACATCATCTTGTTTTGGCTCAGTTTGACAAGGTGACAATCTCTTTCCTC
CACTTTCTGTGAATTAGGCGTTGAGTGCTGTAGTAATATATGATATGGTC
ATATATTTAATGGCTCACAGTTGGAGAACCACTTCTTGAGACTAATCGAA
TATCTTCCTACAAATTTAGGTGACACGTACCAAGAGCAGGTGGAAGTGCA
CACTAAAGGATGGCATCATGCACATCAATAATAAGGACATTCTCTTTAAC
AAGGTTTGATTGTCTTGAAGGGAAAGAAACAGTAATATGTTCTTATTATT
TCTGTTTAGCTCATGAAATTTTGATGGATGATACTACGCTCTTATGCAGG
CAACTGGAGAATTTGACTTCTGA back to topprotein sequence of rna-TanjilR_23531_La_Tanjil_v1.0 >rna-TanjilR_23531_La_Tanjil_v1.0 ID=rna-TanjilR_23531_La_Tanjil_v1.0; Name=rna-TanjilR_23531_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=386bp
MAASTTSQVYIQVIEDVVNKVRDEFGNNGGPGDEVLKEFQAMWESKMIQA
GVILGPIVRSSAPKPTSGGPITPVHDLNMPYEATEEYETPTAEILFPPTP
AQTPIPTPLPGTVDNSMYNIPTGPSDYSSSGNGSVGNTEMKGGRPSAYMP
PPSPWMNQRPALDVNVAYVEGRDEAGRGTSNQPLEQDFFTTNAGKRKRDE
FASQYNAGGYIPQQDGAGDVAPGVFEIEVYGGSISVDAGHSTKGKMAANL
ERPASQIPQLDGPIPYEDDVLSTPNIYNYGGVYNEDYNIANTPAPHEAPV
STPALVAQNEVEEDDDDDEPPLNENDDDDLDDLEQGDEQNTHHLVLAQFD
KVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF back to topmRNA from alignment at Chr_LG08-CM007368.1:24097379..24101751- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >rna-TanjilR_23531_La_Tanjil_v1.0 ID=rna-TanjilR_23531_La_Tanjil_v1.0; Name=rna-TanjilR_23531; organism=Lupinus angustifolius; type=mRNA; length=4373bp; location=Sequence derived from: Chr_LG08-CM007368.1:24097379..24101751- (Lupinus angustifolius
ATGGCGGCTTCCACCACCAGTCAGGTATATATTCAGGTTATCGAGGATGT
CGTCAACAAGGTTCGAGATGAGTTCGGCAATAACGGTGGTCCCGGCGATG
AAGTTCTCAAGGAGTTTCAAGCTGTAATTTCTCTTATTCTTTCCAATCTA
TTTGATTCCACTCATCCATGTTATCTGCATGTATAGATGGTTGAAAATTG
TATAGTTAAATTGATATATTATCTGATGGTTGATTTAGGGCTTGGATCTG
TGTTTGTGTGCTCAAATCTTTGTATTTTTGTTGATAATTTATTTAGATGT
GGGAATCAAAGATGATCCAAGCTGGTGTTATTCTTGGTCCCATAGTAAGG
TCCAGTGCACCTAAGCCAACGTCCGGAGGTCCAATTACTCCGGTTCACGA
TCTCAACATGCCTTACGAGGCGACAGAGGAGTATGAAACTCCCACAGCTG
AAATACTTTTCCCTCCTGTGAGTTTCTACTTTCTAGCAACTAAACAAAAA
AACGTGTGAAGTTATGAGTTGAAATTGTTGTATTGATGATATTGACTTTT
GAGTGTACAGACACCAGCGCAGACTCCTATTCCAACTCCTCTACCAGGAA
CTGTGGATAACTCGATGTATAACATTCCTACTGGACCTAGTGACTACTCA
TCTTCTGGAAATGGTTCTGTGGGAAATACGGAGATGAAAGGTGGAAGACC
TAGTGCATACATGGTAAACCTCATTTTGTGACTCCATGGTACATATGATT
GATAATATTCGAGTAGCTGTCTATTAGAGCAAATAAACTCTGCTGCTACT
TAAACCATGTGCATGGAACTTATTTTCTTTTAGATGTGTGTATTGATCTT
CTCCATACAATCTTGTACAGCCACCTCCTTCTCCATGGATGAACCAGAGG
CCTGCACTTGACGTCAATGTTGGTGAGTTCCATTCAAATTTATGACGTAG
TGATTAGTAGAATGGATTTGCATTAACGACTGTGTATTACTTTAGCTTAT
GTGGAAGGGCGGGATGAGGCAGGCAGAGGAACTTCTAATCAACCTCTGGA
ACAGGTAAGGAAGCTGATGAGGTCTTTTAGAAATTTGTTTGTTGTCAACT
TGAAGAGCTCTTGCGTTAGTCTCTTTCATGAAGGCAGAGAAATAGTTCCT
TTTTTTTCTATGTGCCTGCCTTGAGCATCCTCTCAAATTTAAAAATGGAA
ACATCCAGGACTTCTTCACAACGAATGCAGGAAAGCGAAAACGTGATGAG
TTTGCTTCACAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGC
AGGAGATGTTGCACCTGGAGTTTTTGAAATTGAGGTACAGCTTTCATATT
ATTAAATATCCTTGGGATAGTTTGTTGATTTATATTAGCTTTGTACTTGC
ATATCATTTGTGAGTATTTCTGAAATGATGTTAATAATATTTTTTTGTAA
ATGTGTTTGTGGTGTGTGAGCACGACCAAGAGGAACTGTAGTAAGATCCT
GGTTTCATAGCATTTAATCACCTTTGTTGTCTGTTCTGATGGATATCCTT
TTTCCATCCGTTCAAGCAATATCATGTTTAAATCATATCTTTGAGTCACA
GTTTATTTGACACAAAAGTTGGCTTGAACTTAAAGGTTCTAAAACTGTCT
AAATGTTGACAAACTGAAAACCGAAAAGACAGTGTTATTGTATGCTGAAA
AAATTGTCATACCATGGGAAGTGGTGGAATGAGGGAGATGGGGCAAGGGG
GACTCAGATTCTCTGAAGTTTATTCAAACATGGTGGTACATAGTGGCAGT
TTACCATGAGCACAAATGGATAATGATTTACTTGACAATTACATCAAGAA
ACAAGACTGACAAAGCCTCACCACTATGGAAGAAAAGTATCATAGTTTTT
GTGGTGAAATATGTGAATTTACATTAATTTGAGGTCAAATTGTTAACATG
AAATGTCTCTCCCTGTTCAACTGTACCTATATATTGATTGTTCACACAAA
TGCCATCTACTTCTCCCTCCCTCTCTCTTATCATGGCTATTTCTTATGTT
CTTTGGATTTCCTGCTTGCATCTCTTTCTTCTGCACTGTAGCATTGTTCT
AGAGTGTTGTCAGTCTACAAAGTAGATTTTTACTTTCCAGATCTTCAATT
ATGGTTATACGACGTTAAACAATTAGTCAACATGATTAGAAATAGATCAT
TGAGGTTTGAGGCGCCCTTTTTAGAAACAATTATCCGTGCATTGAGGCAC
CCTTTATTTAGTATAATTGAAATAGATCATGCCTTTATTTTGAAACTTGC
ACCAATTAAGGTTGAGATGTTCAGATTTAATTTTAGACAAAGGTGAAATA
TTTGTTAACTCACTAGATACCACTGCGTCATATGTTCTCTTGACAATGAA
ATCATGTAATTGATAAGAATATAAAAGTTTTCCTCAGTTGGGTTCTGAAT
CTTTTCTTCTATGTTTAGTTTCATTCAGCTGCTCTTAAACAGAAGTTTTT
CTGTCCTGTTATCTTTTTGGGTTGATAAAATTCTTTAGAGATATGGATCT
TTCCAAACATTCAGTACTAGCTTTTCTAATCAACTGTTGCAAGATCGCCT
TTGTTTGACAAGCAATCAGGTTGCACTTTCCAACTGTTGCAAGCACGATC
CCAGTGACTTGCTGCATGTATATTTGCTCAGATGGTCTCTAAACAGTATA
GATCAGAGTCTTCTTTGTCTGCCCATTATTGTAGATTGTTCTTTCAGGTT
CTACATTACAGTAGTGCAGATGTGCATGCATATATTGATGATTGTCTTTT
TGTTGACTTGCATGGTTAATGGAAAGGTTTGTTCATTTACTGAACTGGTG
GATATAAATCTTTCAGGTGTATGGAGGGAGCATCTCTGTTGATGCGGGTC
ACTCTACAAAAGGAAAAATGGCAGCAAATTTGGAGAGGCCAGCCTCTCAG
ATTCCTCAACTTGATGGACCAATTCCTTATGAAGATGATGTGCTTTCTAC
CCCAAATGTGAGTAGGATTTACCTTTCCCTCTTCCCTGCTCTCGTAGAAT
CTTGTAACTTCATCCCTACTTACAGATACACATTTTGTACATATTAAATA
TATCATGACTTGGCCCTACTTTTGTTAGCTGAAAACTCCAATAGTTTGGG
TGTTATATTTAGCTTAGCCCCCTTAATAAAATTGGATGGTGTTTCCATTT
CCATAGTCAATAATTCTGAGCTTGCTAATTTTTTAAACTTGTAATTTCAA
TGGTACTCATAGTCTTGGTTTCCCTATTGATAAACAGGACTATATAACCT
TATTCTATGGAAATACACAACATTTAAGTGATTTAATGAATTGAAATAAG
CATTTAAAATTCTTAAGTGATTTCTTTTTCCAGTCAAGATGGATGTTGTT
GCATTTTATATGATTTGGCACCTGAACTAATTGCTTACTGAACACTGTGA
TATGCTAGATATATTATTACTTGGCACTACTTTTGTTACTTGAAACTCCA
ATTGATTGGGTAGCATGATGTTTTGCCCCCTCCAAATAAATAGATTGGAT
GGTGGTACCAATTCCAAGTTCAATTATTTTGAGCTTGCTAATCTTTTAAA
CTAAAGTTTCAATGGTGTTTCATTTGATATTTTCCTCACCAAGTCTTGCA
ATCCAATCTTATTGTTTTTATTCCCCCTTGCTGCAGATATACAATTATGG
GGGAGTGTACAATGAAGACTACAATATTGCTAATACACCAGCTCCTCATG
GTAAATTGAGAACTTACATATGTTAATTATGTATGTGTCTCATCATACAC
ACACACACACACACATATATATTGCAAATGTTGCTAATACGTTCTCCCCA
CCCACTGTATTTTATTAGAAGCACCTGTAAGTACCCCAGCTCTTGTTGCT
CAAAATGAGGTTGAAGAAGATGATGATGATGATGAGCCCCCGCTAAATGA
AAATGATGATGATGATTTGGATGATTTGGAGCAAGGAGATGAGCAAAATA
CACATCATCTTGTTTTGGCTCAGTTTGACAAGGTGACAATCTCTTTCCTC
CACTTTCTGTGAATTAGGCGTTGAGTGCTGTAGTAATATATGATATGGTC
ATATATTTAATGGCTCACAGTTGGAGAACCACTTCTTGAGACTAATCGAA
TATCTTCCTACAAATTTAGGTGACACGTACCAAGAGCAGGTGGAAGTGCA
CACTAAAGGATGGCATCATGCACATCAATAATAAGGACATTCTCTTTAAC
AAGGTTTGATTGTCTTGAAGGGAAAGAAACAGTAATATGTTCTTATTATT
TCTGTTTAGCTCATGAAATTTTGATGGATGATACTACGCTCTTATGCAGG
CAACTGGAGAATTTGACTTCTGA back to topCoding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24097379..24101751- >rna-TanjilR_23531_La_Tanjil_v1.0 ID=rna-TanjilR_23531_La_Tanjil_v1.0; Name=rna-TanjilR_23531; organism=Lupinus angustifolius; type=CDS; length=1161bp; location=Sequence derived from: Chr_LG08-CM007368.1:24097379..24101751- (Lupinus angustifolius
ATGGCGGCTTCCACCACCAGTCAGGTATATATTCAGGTTATCGAGGATGT
CGTCAACAAGGTTCGAGATGAGTTCGGCAATAACGGTGGTCCCGGCGATG
AAGTTCTCAAGGAGTTTCAAGCTATGTGGGAATCAAAGATGATCCAAGCT
GGTGTTATTCTTGGTCCCATAGTAAGGTCCAGTGCACCTAAGCCAACGTC
CGGAGGTCCAATTACTCCGGTTCACGATCTCAACATGCCTTACGAGGCGA
CAGAGGAGTATGAAACTCCCACAGCTGAAATACTTTTCCCTCCTACACCA
GCGCAGACTCCTATTCCAACTCCTCTACCAGGAACTGTGGATAACTCGAT
GTATAACATTCCTACTGGACCTAGTGACTACTCATCTTCTGGAAATGGTT
CTGTGGGAAATACGGAGATGAAAGGTGGAAGACCTAGTGCATACATGCCA
CCTCCTTCTCCATGGATGAACCAGAGGCCTGCACTTGACGTCAATGTTGC
TTATGTGGAAGGGCGGGATGAGGCAGGCAGAGGAACTTCTAATCAACCTC
TGGAACAGGACTTCTTCACAACGAATGCAGGAAAGCGAAAACGTGATGAG
TTTGCTTCACAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGC
AGGAGATGTTGCACCTGGAGTTTTTGAAATTGAGGTGTATGGAGGGAGCA
TCTCTGTTGATGCGGGTCACTCTACAAAAGGAAAAATGGCAGCAAATTTG
GAGAGGCCAGCCTCTCAGATTCCTCAACTTGATGGACCAATTCCTTATGA
AGATGATGTGCTTTCTACCCCAAATATATACAATTATGGGGGAGTGTACA
ATGAAGACTACAATATTGCTAATACACCAGCTCCTCATGAAGCACCTGTA
AGTACCCCAGCTCTTGTTGCTCAAAATGAGGTTGAAGAAGATGATGATGA
TGATGAGCCCCCGCTAAATGAAAATGATGATGATGATTTGGATGATTTGG
AGCAAGGAGATGAGCAAAATACACATCATCTTGTTTTGGCTCAGTTTGAC
AAGGTGACACGTACCAAGAGCAGGTGGAAGTGCACACTAAAGGATGGCAT
CATGCACATCAATAATAAGGACATTCTCTTTAACAAGGCAACTGGAGAAT
TTGACTTCTGA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005672 | transcription factor TFIIA complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006367 | transcription initiation at RNA polymerase II promoter |
|
