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Transcript Overview
Name | rna-TanjilR_23511 |
Unique Name | rna-TanjilR_23511_La_Tanjil_v1.0 |
Type | mRNA |
Organism | Lupinus angustifolius (blue lupin) |
Sequence length | 5202 |
Product | hypothetical protein |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_23511 | rna-TanjilR_23511_La_Tanjil_v1.0-protein | Lupinus angustifolius | polypeptide |
rna-TanjilR_23511_La_Tanjil_v1.0 | rna-TanjilR_23511_La_Tanjil_v1.0 | Lupinus angustifolius | polypeptide |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24209717..24210218 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24209717..24210218 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208958..24209160 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208958..24209160 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208680..24208877 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208680..24208877 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208369..24208440 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208369..24208440 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208094..24208189 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208094..24208189 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24207755..24207834 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24207755..24207834 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24207413..24207491 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24207413..24207491 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206941..24207151 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206941..24207151 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206645..24206841 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206645..24206841 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206171..24206276 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206171..24206276 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24205865..24205954 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24205865..24205954 | Lupinus angustifolius | CDS |
rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24205017..24205741 | rna-TanjilR_23511_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24205017..24205741 | Lupinus angustifolius | CDS |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24209717..24210218 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24209717..24210218 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208958..24209160 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208958..24209160 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208680..24208877 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208680..24208877 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208369..24208440 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208369..24208440 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208094..24208189 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24208094..24208189 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24207755..24207834 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24207755..24207834 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24207413..24207491 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24207413..24207491 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206941..24207151 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206941..24207151 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206645..24206841 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206645..24206841 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206171..24206276 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24206171..24206276 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24205865..24205954 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24205865..24205954 | Lupinus angustifolius | exon |
rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24205017..24205741 | rna-TanjilR_23511_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24205017..24205741 | Lupinus angustifolius | exon |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | GENE3D | 2.80.10.50 | | coord: 714..834 e-value: 3.1E-7 score: 32.3 |
IPR012878 | Beta-L-arabinofuranosidase, GH127 | PFAM | PF07944 | Glyco_hydro_127 | coord: 114..631 e-value: 8.5E-131 score: 437.0 |
IPR036195 | Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily | SUPERFAMILY | 110221 | AbfB domain | coord: 746..834 |
IPR008928 | Six-hairpin glycosidase superfamily | SUPERFAMILY | 48208 | Six-hairpin glycosidases | coord: 167..446 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23511_La_Tanjil_v1.0 ID=rna-TanjilR_23511_La_Tanjil_v1.0; Name=rna-TanjilR_23511; organism=Lupinus angustifolius; type=mRNA; length=5202bp ATGGAGGCTTTTCTATTTGTGTTTGTATCCTTTGTTGTTCTGTGTGGTTA TGGTGTGAGTAAAGAGTGTACAAACATTCCAACCCAATCACACACATTCC GTTATGAACTGTTAACATCCAACAATGAAACATGGAAGCAAGAAGTTATG TCTCATTACCATTTGACACCAACTGATGACTCAGCTTGGGAAGATATGCT TCCAAGGAGATTCTCCAGAGAGGATCATCAACATGAATGGTCAATGATTT ATAGGAAAGTCAAGAACTTGGGTGTGTTTGCTCCACCTAAAGGGTTTCTG AAAGAGGTGTCATTGCATGATTTGAGATTGCAAGAGGGTTCAATACATGC TCAAGCACAGAAGACAAACTTGGAGTATTTGTTAATGTTGGATGTTGATA GGTTGATTTGGAGCTTCAGGAACAATGCTGGTTTACCAACTCCTTCTACA CCTTATGGAGGTTGGGAAGGTGCTCAAGTTGAACTCAGGGGTCATTTTGT TGGTTAGTTTATTAATCATTTTAATTTTCCTTTTCAGTTAAGAAATTTTA CTTGTGTCCCACTTTAATGATCTTTATTTGCACTTAGCTCTTCTTAAAGA CTTGCTTATTGGCATTGCTATTGGTACAACAATTCTATAATTGGTTGGCT CTTTTCATCCCAAGATTCAAAAGGGCATGCATCTCTTTTTCTTGTGATGC TTTTTCCACTTTTTGTGCTTTTTTATTTTCATTTTGTTAAGTCAGAGCAA GGAGAAAATTGTATTATTTTTTTAATAAAAGTTGCAGTTATATTTAAAGA AAATTTCATAGTTGATACTTTTTTTTGCTACATAATCAACTAAACAGCAT ACAAATGTAAATGCATGTCTTTCTGCATACAAAGGTTATCCTCCTTGGAC TCAATTTTTGTCTAGAACTGAACCATATTTACTTTGTTTGAGGTTAATTC ATAGCTCCTGAAATATCTTCTCACACATTGAAGTGCATTACTTGCTCAAA GCCAGTGCAATTCACTTTTCAAGGTTAATTTATAATTGCTTGTTTTGTTA CTTTGAAGGACATTACTTGAGTGCTTCAGCTCTAATGTGGGCCAGCACAC ACAATGTTAGCCTGAAGGAGAAAATGTCAGCTGTTGTTGCAGGTCTATCT GCCTGTCAAGAGAAAATCGGAACAGGATATCTCTCTGCATTTCCATCTCA GTTTTTCGATCGATTCGAAGCTATTCAACCTGTGTGGGCTCCCTATTACA CCATTCACAAGGTACAGTCAAAAGTAGATTTTGGTTATGCAAGTGGTTTT AGCCTTACTATTGTTGGATTTCAACTATTCAGCTTTGACAGATCTTAGCC GGCCTGTTGGATCAACATACTATAGCCGGAAACCCTCAGGCTCTAAAAAT GGTGACATGGATGGTTGATTACTTTTACAACCGAGTCCTGAATGTAATAA CACAGTTCAGTATAAATAGACACTATCAATCAATAAATGAGGAAACTGGA GGAATGAATGATGTCCTTTACAGATTATATAGCTTAACCGTAAGTTAACT AGTTCATGTAACTTCTTTAACTCTCTTCTTGCTTCATTTGCTTATATGAA TAGGCATTAACAGATATGAATTATAAATTTATAATCCATAAGTCAGAATT TCAGATATGATTTTATATGAATTGGCATGCCTATATTCATATAATAGTTT TTATGATTATGACACATGGTACAAAGTTACTGCTGTAAATTTTAATTCCA AACTGAACTTTTCGTGTATCGTATGCAGGGAGATCCAAAACATCTAGTGT TGGCTCACCTTTTTGACAAGCCATGCTTTCTGGGATTGCTTGCAGTCCAG GTAGTGATAATAACACTTGTCATGACCGAATTGCTACTTATTCTTCGTTG TCTTATATTGTGCTCACCATGAAACTAGATATTTGGATGTCGAACTTAGG ATTTCCGTTTCAAGTCTAGAAATTTTATCTAATTTATAACAAGGTCCGTG AATAAAATTCACTTTTTTTCTTCATGCAGGCTAATGATATAGCTGATTTT CATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGGTATGA AGTCACAGGGGATCCACTTTATAAGGTGAACTGCTCTATGCATACAGTAG CTTGCTGCTAAAAATATCACTAGATTTGATGGAATTGTGTTTACTTACAA TTTGTTGGTGTAATATGATTTACTCAGTTTTATTTTTTCAGTACTCACCT AGTTATAGCAATTTTGTGTTCTCCAATATCACATATGCTTATTTTACCAC AGTTGCATTGGTTGTACATTAAGCCAAGTAGAAGTTACCATTTGTCATGC TTTTCAATTTTCTAAAATCTGTTCTTGTTGTTAGGAAATTGGGACATTCT TTATGGACCTTATTAACTCTTCTCACAGCTATGCAACTGGAGGCACATCA GTCAGTGAATTCTGGTATTGAGATGCCACATTTTTAGTTTTAGTTCTTTC AAATGCATTTATAATCCTCCATTTAATAATTGTTTTATTATATTAAGGTT AGGCACCAGAAATTTACTAAAAAAAGAAGATGGAGTCTAGCTCCTTTCAC ATTTCCCATGCTGTAGAAGCATAGGGGTCTATCAACTAGCCTTCATGCTG AAAATGTTCTGTTCTTTTATTCATTGGTAATCAGTTATATATTTCTACTA AATACATGTACTTCAATTTTTGCGTAGGCATGATCCAAAGAGAATAGCCG ACAACCTAAAAACAACAGAGAATGAAGAGTCATGCACAACTTATAATATG CTGAAGGTATAGCCAATCACTCATCATTTTAATAATGCATCAGAAGTTCA AAATGTGCGTATGAAGTTTCCATAAAAAAAATTGAACTGTCTGAAGAGGG AAGACCTATTGTCTCATGGTAATTCATTAGCATATTCTTGTGATTATGCA TTTATATGTGAGTGTGATGTATATTCTGGGATAAATCTTAGTTTATTTCT ATTGAAATATTTATGTTGTATAATGCTTCCATTACCTTAGCACCCAAAAA CTAAAATGATTTGTCAGGTTTCGCGCCACCTGTTTAGATGGACAAAAGAA GTTTCGTATGCCGATTATTATGAGCGTGCCTTAACAAATGGTGTACTCAG CATTCAAAGAGGAACAGATCCCGGAGTGATGATTTATATGCTTCCACTAG GGCATGGTGTTTCCAAGGCTAGAACTGGACATAGTTGGGGAACACCATTT GACTCTTTCTGGTGCTGCTATGGAACTGGTATGCATTTATTTGTAATATT TACTTTTCCATTTGCATCAAAGTGCATCCATGTTCTCATCAGTCTAATGC TCTAAAGTTCTTTTCCGTGTTCATTAGGAATTGAATCATTCTCAAAGCTG GGAGATTCTATCTATTTTGTAGAGGGAGGGAACCATCCTGCTCTTTACAT CATTCAGTACATATCAAGCTCGTTTAATTGGAAATCCGGAAACGTTGTTC TTAATCAGACAGTAGTTCCAGCTGCTTCATGGGATCCTTACTTACGAGTC ACATTTACATTTTCTCCTACTGAGGTACCTGTTACATTGTTATTCTTATA GCATCTCATTTTTCCAAATATGTTGATATAACTAGCATAAGGATACAAAT GATGCTTGCTTTTGTTTGATTTTGGGTCAATATCATGTTGATATCCAGCC TTTTTTTACCATAACTTGAAAATTGCAGAGTCAAGGTGCTTATTAATTGA AGATGGATATAATATCAAAGTTAGATATCACAACTGGATTATGACAATTT AGTAACTTACATTTATTGTAAAATTTCAACTGCTAAACTTATTAGCTAGA GGGTAATGGACAAGGTGCAATGTGAAGATAATCAGCACATGATCCTATAC ATTTTTTTTCTCAAATCTATCTTTCAAATCTTACTTTTGCAGAAAACTGG TACTTCGTCCATATTGAACTTTCGACTACCATCTTGGACTCATACAAATG GTGCCAAGGGGATGTTGAATGGTGAAACTTTATCTCTGCCAGCTCCAGGT GTGAAGCACTCTTAATTTCCCTTTTCAATGAAAAGTAGTTGTTCCACCAG TTATCTAAACTGCACACGCGCATGCACGCATACGCATACACTGGATTCTA AAAAACTGAGCCCATTCAAGTTCGGATACATACACAGACAGACATGCTAG ATCCTAGGACTTTCACAAAAAAAGTTAACACATGAAAGTCATATTCTATT TTTTGGACCTGTAGGAAATTTTTTATCAGTCACACGACAATGGAGTGCTG GTGACAAGTTGACTCTTCAGTTGCCTATTACCCTCAGAACAGAGGCCATA AAAGGTTGTTTCACAACATGATCCATATCTGTTAGTTAATTATCAGTATT CTTCATTTTTCATACCATATATATTTTATGAATTTGTTTGCCTACATTAC TGATATTGTGTTATGAATTAAATTCAGATGATAGGTCTGAATATGCATCC CTTCAAGCAATTCTCTATGGTCCGTATCTTCTTGCCGGTCATACGACCGG TGATTGGGACATTAAATCCGGGGCTAACCAAGCTATTTCAGAATGGATCA CTCCCATTCCTGCCAGCTACAATAGTCAACTAATTTCCTTTTCCCAAGAC TTTGCAAAATCAAGTTTTGTTTTAACAAACTCAAACCCATCACTTACTAT GCAAAAGTTACCTGGACCTGGCACTGATTTGGCTCTTCGTGCAACATTTA GACTTATACTAAAAGAACCTTCCACAAAGCACTCAACATTTTCAAATGCT GTTGGTAAATCAGTACTCTTAGAACCATTTGATCTTCCTGGAATGAATGT GATTCACCAAGGAGCAAATCAACCTCTTGTCATTTCTTCACAAGTTGAGT CATCATCTATTTTTCTTGTGGTACCAGGATTGGATGGAAGAAATGAAACC ATATCTTTAGAATCCCAAACCAACAATGGTTGCTACATGTACAGTAGTAT GAACTTTGTTGCAGAAGTGAAGCTCAGTTGTAAGTCTGATTCTGATGCTA CTTTTAACCAAGCAGCAAGCTTTGTTGCATGGAAAGGATTAAGACAATAT AATCCTATCAGCTTTGTGGCTAAAGGGGCAAACAGAAATTTTGTTTTGGA GCCATTACTCACCTTCAGAGATGAGACAGTGTATTTCAACATGCAACACT GA back to topprotein sequence of rna-TanjilR_23511_La_Tanjil_v1.0 >rna-TanjilR_23511_La_Tanjil_v1.0 ID=rna-TanjilR_23511_La_Tanjil_v1.0; Name=rna-TanjilR_23511_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=852bp MEAFLFVFVSFVVLCGYGVSKECTNIPTQSHTFRYELLTSNNETWKQEVM SHYHLTPTDDSAWEDMLPRRFSREDHQHEWSMIYRKVKNLGVFAPPKGFL KEVSLHDLRLQEGSIHAQAQKTNLEYLLMLDVDRLIWSFRNNAGLPTPST PYGGWEGAQVELRGHFVGHYLSASALMWASTHNVSLKEKMSAVVAGLSAC QEKIGTGYLSAFPSQFFDRFEAIQPVWAPYYTIHKILAGLLDQHTIAGNP QALKMVTWMVDYFYNRVLNVITQFSINRHYQSINEETGGMNDVLYRLYSL TGDPKHLVLAHLFDKPCFLGLLAVQANDIADFHANTHIPVVVGSQMRYEV TGDPLYKEIGTFFMDLINSSHSYATGGTSVSEFWHDPKRIADNLKTTENE ESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIY MLPLGHGVSKARTGHSWGTPFDSFWCCYGTGIESFSKLGDSIYFVEGGNH PALYIIQYISSSFNWKSGNVVLNQTVVPAASWDPYLRVTFTFSPTEKTGT SSILNFRLPSWTHTNGAKGMLNGETLSLPAPGNFLSVTRQWSAGDKLTLQ LPITLRTEAIKDDRSEYASLQAILYGPYLLAGHTTGDWDIKSGANQAISE WITPIPASYNSQLISFSQDFAKSSFVLTNSNPSLTMQKLPGPGTDLALRA TFRLILKEPSTKHSTFSNAVGKSVLLEPFDLPGMNVIHQGANQPLVISSQ VESSSIFLVVPGLDGRNETISLESQTNNGCYMYSSMNFVAEVKLSCKSDS DATFNQAASFVAWKGLRQYNPISFVAKGANRNFVLEPLLTFRDETVYFNM QH back to topmRNA from alignment at Chr_LG08-CM007368.1:24205017..24210218- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >rna-TanjilR_23511_La_Tanjil_v1.0 ID=rna-TanjilR_23511_La_Tanjil_v1.0; Name=rna-TanjilR_23511; organism=Lupinus angustifolius; type=mRNA; length=5202bp; location=Sequence derived from: Chr_LG08-CM007368.1:24205017..24210218- (Lupinus angustifolius ATGGAGGCTTTTCTATTTGTGTTTGTATCCTTTGTTGTTCTGTGTGGTTA
TGGTGTGAGTAAAGAGTGTACAAACATTCCAACCCAATCACACACATTCC
GTTATGAACTGTTAACATCCAACAATGAAACATGGAAGCAAGAAGTTATG
TCTCATTACCATTTGACACCAACTGATGACTCAGCTTGGGAAGATATGCT
TCCAAGGAGATTCTCCAGAGAGGATCATCAACATGAATGGTCAATGATTT
ATAGGAAAGTCAAGAACTTGGGTGTGTTTGCTCCACCTAAAGGGTTTCTG
AAAGAGGTGTCATTGCATGATTTGAGATTGCAAGAGGGTTCAATACATGC
TCAAGCACAGAAGACAAACTTGGAGTATTTGTTAATGTTGGATGTTGATA
GGTTGATTTGGAGCTTCAGGAACAATGCTGGTTTACCAACTCCTTCTACA
CCTTATGGAGGTTGGGAAGGTGCTCAAGTTGAACTCAGGGGTCATTTTGT
TGGTTAGTTTATTAATCATTTTAATTTTCCTTTTCAGTTAAGAAATTTTA
CTTGTGTCCCACTTTAATGATCTTTATTTGCACTTAGCTCTTCTTAAAGA
CTTGCTTATTGGCATTGCTATTGGTACAACAATTCTATAATTGGTTGGCT
CTTTTCATCCCAAGATTCAAAAGGGCATGCATCTCTTTTTCTTGTGATGC
TTTTTCCACTTTTTGTGCTTTTTTATTTTCATTTTGTTAAGTCAGAGCAA
GGAGAAAATTGTATTATTTTTTTAATAAAAGTTGCAGTTATATTTAAAGA
AAATTTCATAGTTGATACTTTTTTTTGCTACATAATCAACTAAACAGCAT
ACAAATGTAAATGCATGTCTTTCTGCATACAAAGGTTATCCTCCTTGGAC
TCAATTTTTGTCTAGAACTGAACCATATTTACTTTGTTTGAGGTTAATTC
ATAGCTCCTGAAATATCTTCTCACACATTGAAGTGCATTACTTGCTCAAA
GCCAGTGCAATTCACTTTTCAAGGTTAATTTATAATTGCTTGTTTTGTTA
CTTTGAAGGACATTACTTGAGTGCTTCAGCTCTAATGTGGGCCAGCACAC
ACAATGTTAGCCTGAAGGAGAAAATGTCAGCTGTTGTTGCAGGTCTATCT
GCCTGTCAAGAGAAAATCGGAACAGGATATCTCTCTGCATTTCCATCTCA
GTTTTTCGATCGATTCGAAGCTATTCAACCTGTGTGGGCTCCCTATTACA
CCATTCACAAGGTACAGTCAAAAGTAGATTTTGGTTATGCAAGTGGTTTT
AGCCTTACTATTGTTGGATTTCAACTATTCAGCTTTGACAGATCTTAGCC
GGCCTGTTGGATCAACATACTATAGCCGGAAACCCTCAGGCTCTAAAAAT
GGTGACATGGATGGTTGATTACTTTTACAACCGAGTCCTGAATGTAATAA
CACAGTTCAGTATAAATAGACACTATCAATCAATAAATGAGGAAACTGGA
GGAATGAATGATGTCCTTTACAGATTATATAGCTTAACCGTAAGTTAACT
AGTTCATGTAACTTCTTTAACTCTCTTCTTGCTTCATTTGCTTATATGAA
TAGGCATTAACAGATATGAATTATAAATTTATAATCCATAAGTCAGAATT
TCAGATATGATTTTATATGAATTGGCATGCCTATATTCATATAATAGTTT
TTATGATTATGACACATGGTACAAAGTTACTGCTGTAAATTTTAATTCCA
AACTGAACTTTTCGTGTATCGTATGCAGGGAGATCCAAAACATCTAGTGT
TGGCTCACCTTTTTGACAAGCCATGCTTTCTGGGATTGCTTGCAGTCCAG
GTAGTGATAATAACACTTGTCATGACCGAATTGCTACTTATTCTTCGTTG
TCTTATATTGTGCTCACCATGAAACTAGATATTTGGATGTCGAACTTAGG
ATTTCCGTTTCAAGTCTAGAAATTTTATCTAATTTATAACAAGGTCCGTG
AATAAAATTCACTTTTTTTCTTCATGCAGGCTAATGATATAGCTGATTTT
CATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGGTATGA
AGTCACAGGGGATCCACTTTATAAGGTGAACTGCTCTATGCATACAGTAG
CTTGCTGCTAAAAATATCACTAGATTTGATGGAATTGTGTTTACTTACAA
TTTGTTGGTGTAATATGATTTACTCAGTTTTATTTTTTCAGTACTCACCT
AGTTATAGCAATTTTGTGTTCTCCAATATCACATATGCTTATTTTACCAC
AGTTGCATTGGTTGTACATTAAGCCAAGTAGAAGTTACCATTTGTCATGC
TTTTCAATTTTCTAAAATCTGTTCTTGTTGTTAGGAAATTGGGACATTCT
TTATGGACCTTATTAACTCTTCTCACAGCTATGCAACTGGAGGCACATCA
GTCAGTGAATTCTGGTATTGAGATGCCACATTTTTAGTTTTAGTTCTTTC
AAATGCATTTATAATCCTCCATTTAATAATTGTTTTATTATATTAAGGTT
AGGCACCAGAAATTTACTAAAAAAAGAAGATGGAGTCTAGCTCCTTTCAC
ATTTCCCATGCTGTAGAAGCATAGGGGTCTATCAACTAGCCTTCATGCTG
AAAATGTTCTGTTCTTTTATTCATTGGTAATCAGTTATATATTTCTACTA
AATACATGTACTTCAATTTTTGCGTAGGCATGATCCAAAGAGAATAGCCG
ACAACCTAAAAACAACAGAGAATGAAGAGTCATGCACAACTTATAATATG
CTGAAGGTATAGCCAATCACTCATCATTTTAATAATGCATCAGAAGTTCA
AAATGTGCGTATGAAGTTTCCATAAAAAAAATTGAACTGTCTGAAGAGGG
AAGACCTATTGTCTCATGGTAATTCATTAGCATATTCTTGTGATTATGCA
TTTATATGTGAGTGTGATGTATATTCTGGGATAAATCTTAGTTTATTTCT
ATTGAAATATTTATGTTGTATAATGCTTCCATTACCTTAGCACCCAAAAA
CTAAAATGATTTGTCAGGTTTCGCGCCACCTGTTTAGATGGACAAAAGAA
GTTTCGTATGCCGATTATTATGAGCGTGCCTTAACAAATGGTGTACTCAG
CATTCAAAGAGGAACAGATCCCGGAGTGATGATTTATATGCTTCCACTAG
GGCATGGTGTTTCCAAGGCTAGAACTGGACATAGTTGGGGAACACCATTT
GACTCTTTCTGGTGCTGCTATGGAACTGGTATGCATTTATTTGTAATATT
TACTTTTCCATTTGCATCAAAGTGCATCCATGTTCTCATCAGTCTAATGC
TCTAAAGTTCTTTTCCGTGTTCATTAGGAATTGAATCATTCTCAAAGCTG
GGAGATTCTATCTATTTTGTAGAGGGAGGGAACCATCCTGCTCTTTACAT
CATTCAGTACATATCAAGCTCGTTTAATTGGAAATCCGGAAACGTTGTTC
TTAATCAGACAGTAGTTCCAGCTGCTTCATGGGATCCTTACTTACGAGTC
ACATTTACATTTTCTCCTACTGAGGTACCTGTTACATTGTTATTCTTATA
GCATCTCATTTTTCCAAATATGTTGATATAACTAGCATAAGGATACAAAT
GATGCTTGCTTTTGTTTGATTTTGGGTCAATATCATGTTGATATCCAGCC
TTTTTTTACCATAACTTGAAAATTGCAGAGTCAAGGTGCTTATTAATTGA
AGATGGATATAATATCAAAGTTAGATATCACAACTGGATTATGACAATTT
AGTAACTTACATTTATTGTAAAATTTCAACTGCTAAACTTATTAGCTAGA
GGGTAATGGACAAGGTGCAATGTGAAGATAATCAGCACATGATCCTATAC
ATTTTTTTTCTCAAATCTATCTTTCAAATCTTACTTTTGCAGAAAACTGG
TACTTCGTCCATATTGAACTTTCGACTACCATCTTGGACTCATACAAATG
GTGCCAAGGGGATGTTGAATGGTGAAACTTTATCTCTGCCAGCTCCAGGT
GTGAAGCACTCTTAATTTCCCTTTTCAATGAAAAGTAGTTGTTCCACCAG
TTATCTAAACTGCACACGCGCATGCACGCATACGCATACACTGGATTCTA
AAAAACTGAGCCCATTCAAGTTCGGATACATACACAGACAGACATGCTAG
ATCCTAGGACTTTCACAAAAAAAGTTAACACATGAAAGTCATATTCTATT
TTTTGGACCTGTAGGAAATTTTTTATCAGTCACACGACAATGGAGTGCTG
GTGACAAGTTGACTCTTCAGTTGCCTATTACCCTCAGAACAGAGGCCATA
AAAGGTTGTTTCACAACATGATCCATATCTGTTAGTTAATTATCAGTATT
CTTCATTTTTCATACCATATATATTTTATGAATTTGTTTGCCTACATTAC
TGATATTGTGTTATGAATTAAATTCAGATGATAGGTCTGAATATGCATCC
CTTCAAGCAATTCTCTATGGTCCGTATCTTCTTGCCGGTCATACGACCGG
TGATTGGGACATTAAATCCGGGGCTAACCAAGCTATTTCAGAATGGATCA
CTCCCATTCCTGCCAGCTACAATAGTCAACTAATTTCCTTTTCCCAAGAC
TTTGCAAAATCAAGTTTTGTTTTAACAAACTCAAACCCATCACTTACTAT
GCAAAAGTTACCTGGACCTGGCACTGATTTGGCTCTTCGTGCAACATTTA
GACTTATACTAAAAGAACCTTCCACAAAGCACTCAACATTTTCAAATGCT
GTTGGTAAATCAGTACTCTTAGAACCATTTGATCTTCCTGGAATGAATGT
GATTCACCAAGGAGCAAATCAACCTCTTGTCATTTCTTCACAAGTTGAGT
CATCATCTATTTTTCTTGTGGTACCAGGATTGGATGGAAGAAATGAAACC
ATATCTTTAGAATCCCAAACCAACAATGGTTGCTACATGTACAGTAGTAT
GAACTTTGTTGCAGAAGTGAAGCTCAGTTGTAAGTCTGATTCTGATGCTA
CTTTTAACCAAGCAGCAAGCTTTGTTGCATGGAAAGGATTAAGACAATAT
AATCCTATCAGCTTTGTGGCTAAAGGGGCAAACAGAAATTTTGTTTTGGA
GCCATTACTCACCTTCAGAGATGAGACAGTGTATTTCAACATGCAACACT
GA back to topCoding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24205017..24210218- >rna-TanjilR_23511_La_Tanjil_v1.0 ID=rna-TanjilR_23511_La_Tanjil_v1.0; Name=rna-TanjilR_23511; organism=Lupinus angustifolius; type=CDS; length=2559bp; location=Sequence derived from: Chr_LG08-CM007368.1:24205017..24210218- (Lupinus angustifolius ATGGAGGCTTTTCTATTTGTGTTTGTATCCTTTGTTGTTCTGTGTGGTTA TGGTGTGAGTAAAGAGTGTACAAACATTCCAACCCAATCACACACATTCC GTTATGAACTGTTAACATCCAACAATGAAACATGGAAGCAAGAAGTTATG TCTCATTACCATTTGACACCAACTGATGACTCAGCTTGGGAAGATATGCT TCCAAGGAGATTCTCCAGAGAGGATCATCAACATGAATGGTCAATGATTT ATAGGAAAGTCAAGAACTTGGGTGTGTTTGCTCCACCTAAAGGGTTTCTG AAAGAGGTGTCATTGCATGATTTGAGATTGCAAGAGGGTTCAATACATGC TCAAGCACAGAAGACAAACTTGGAGTATTTGTTAATGTTGGATGTTGATA GGTTGATTTGGAGCTTCAGGAACAATGCTGGTTTACCAACTCCTTCTACA CCTTATGGAGGTTGGGAAGGTGCTCAAGTTGAACTCAGGGGTCATTTTGT TGGACATTACTTGAGTGCTTCAGCTCTAATGTGGGCCAGCACACACAATG TTAGCCTGAAGGAGAAAATGTCAGCTGTTGTTGCAGGTCTATCTGCCTGT CAAGAGAAAATCGGAACAGGATATCTCTCTGCATTTCCATCTCAGTTTTT CGATCGATTCGAAGCTATTCAACCTGTGTGGGCTCCCTATTACACCATTC ACAAGATCTTAGCCGGCCTGTTGGATCAACATACTATAGCCGGAAACCCT CAGGCTCTAAAAATGGTGACATGGATGGTTGATTACTTTTACAACCGAGT CCTGAATGTAATAACACAGTTCAGTATAAATAGACACTATCAATCAATAA ATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATATAGCTTA ACCGGAGATCCAAAACATCTAGTGTTGGCTCACCTTTTTGACAAGCCATG CTTTCTGGGATTGCTTGCAGTCCAGGCTAATGATATAGCTGATTTTCATG CTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGGTATGAAGTC ACAGGGGATCCACTTTATAAGGAAATTGGGACATTCTTTATGGACCTTAT TAACTCTTCTCACAGCTATGCAACTGGAGGCACATCAGTCAGTGAATTCT GGCATGATCCAAAGAGAATAGCCGACAACCTAAAAACAACAGAGAATGAA GAGTCATGCACAACTTATAATATGCTGAAGGTTTCGCGCCACCTGTTTAG ATGGACAAAAGAAGTTTCGTATGCCGATTATTATGAGCGTGCCTTAACAA ATGGTGTACTCAGCATTCAAAGAGGAACAGATCCCGGAGTGATGATTTAT ATGCTTCCACTAGGGCATGGTGTTTCCAAGGCTAGAACTGGACATAGTTG GGGAACACCATTTGACTCTTTCTGGTGCTGCTATGGAACTGGAATTGAAT CATTCTCAAAGCTGGGAGATTCTATCTATTTTGTAGAGGGAGGGAACCAT CCTGCTCTTTACATCATTCAGTACATATCAAGCTCGTTTAATTGGAAATC CGGAAACGTTGTTCTTAATCAGACAGTAGTTCCAGCTGCTTCATGGGATC CTTACTTACGAGTCACATTTACATTTTCTCCTACTGAGAAAACTGGTACT TCGTCCATATTGAACTTTCGACTACCATCTTGGACTCATACAAATGGTGC CAAGGGGATGTTGAATGGTGAAACTTTATCTCTGCCAGCTCCAGGAAATT TTTTATCAGTCACACGACAATGGAGTGCTGGTGACAAGTTGACTCTTCAG TTGCCTATTACCCTCAGAACAGAGGCCATAAAAGATGATAGGTCTGAATA TGCATCCCTTCAAGCAATTCTCTATGGTCCGTATCTTCTTGCCGGTCATA CGACCGGTGATTGGGACATTAAATCCGGGGCTAACCAAGCTATTTCAGAA TGGATCACTCCCATTCCTGCCAGCTACAATAGTCAACTAATTTCCTTTTC CCAAGACTTTGCAAAATCAAGTTTTGTTTTAACAAACTCAAACCCATCAC TTACTATGCAAAAGTTACCTGGACCTGGCACTGATTTGGCTCTTCGTGCA ACATTTAGACTTATACTAAAAGAACCTTCCACAAAGCACTCAACATTTTC AAATGCTGTTGGTAAATCAGTACTCTTAGAACCATTTGATCTTCCTGGAA TGAATGTGATTCACCAAGGAGCAAATCAACCTCTTGTCATTTCTTCACAA GTTGAGTCATCATCTATTTTTCTTGTGGTACCAGGATTGGATGGAAGAAA TGAAACCATATCTTTAGAATCCCAAACCAACAATGGTTGCTACATGTACA GTAGTATGAACTTTGTTGCAGAAGTGAAGCTCAGTTGTAAGTCTGATTCT GATGCTACTTTTAACCAAGCAGCAAGCTTTGTTGCATGGAAAGGATTAAG ACAATATAATCCTATCAGCTTTGTGGCTAAAGGGGCAAACAGAAATTTTG TTTTGGAGCCATTACTCACCTTCAGAGATGAGACAGTGTATTTCAACATG CAACACTGA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0046373 | L-arabinose metabolic process |
Vocabulary: Molecular Function
Term | Definition |
GO:0046556 | alpha-L-arabinofuranosidase activity |
GO:0003824 | catalytic activity |
|