rna-TanjilR_23510
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: DR100_ARATH (DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=DRT100 PE=2 SV=2) HSP 1 Score: 364.385 bits (934), Expect = 2.210e-123 Identity = 180/346 (52.02%), Postives = 242/346 (69.94%), Query Frame = 1 Query: 85 CPPSEWAALMAFKAALTEPNIGIFNSW-RGTNCCYHWYGINCDPTTHRVADITLRGLTIADDNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLS-SRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCGHPL 1116 C P + AL AFK++L+EPN+GIFN+W T+CC WYGI+CDP + RV DI+LRG + + +GYM+GSI P++C L L++L ++DWKGI+G IP CIT+L+ L+ +DL+GN I+G++P +IG L++L VLNLA+N +SG IP +L +L L L+L N + G IP DFG LK L+RVLL N +TG IP SIS + LAD+DLS N + G + + MG M VL LNL N+LTG IP +LLS S + +LSRN L G I DVF ++Y ++LDLSHN LSG + S+ SA ++GHLD+SHN LCG IP G PF+HL+ SF +N+CLCG PL Sbjct: 27 CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRG----ESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPL 368
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera OX=29760 GN=pgip PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 3.094e-44 Identity = 118/351 (33.62%), Postives = 170/351 (48.43%), Query Frame = 1 Query: 79 ESCPPSEWAALMAFKAALTEPNIGIFNSWRGTNCCYHWYGINCDPTTHRVADITLRGLTIADDNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVL-LSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYN-NLTGKIPWTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCGHPLKPC 1125 E C P + L+ K AL P I SW C WY + CD TTHR+ +T+ +G ++G I ++ L L TL ++G IP I L L+ + LS +SG VP L LT L+L+ N++SG IP +L LPNL L L N + GPIP FGK L LSHN+++G IP S + +DLS N+L G L++ +N N + +I +D SRN+ +++ V +S +LDLSHN+++G + + M S + L++S+N LCG IP G S+ +NRCLCG PL+ C Sbjct: 28 ERCNPKDKKVLLQIKKALDNPYI--LASWNPNTDCCGWYCVECDLTTHRINSLTI-----------------FSGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSFGKFAGSTPGLHLSHNQLSGKIPYSFRG-FDPNVMDLSRNKLEG-------------DLSIFFNANKSTQI-----------VDFSRNLFQFDLSRVEFPKS-LTSLDLSHNKIAGSLPEMMTSLD-LQFLNVSYNRLCGKIPVGGKLQSFDYDSYFHNRCLCGAPLQSC 332
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: FLOR1_ARATH (Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 7.001e-42 Identity = 114/350 (32.57%), Postives = 170/350 (48.57%), Query Frame = 1 Query: 82 SCPPSEWAALMAFKAALTEPNIGIFNSWR-GTNCCYHWYGINCDPTTHRVADITLRGLTIADDNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGK-LKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCGHPLKPC 1125 SC ++ AL+ K AL P + +SW T+CC W G+ C T RV GL++ +G ++G IS I L L TL S ++GNIP IT L L + L +SG +P I L LT L+L+ N +G IP +L +P L + + +N + G IP FG + + + LS+N+++G IP S+S Y +DLS N G G+ N T ++ DLSRNM + ++ V RS ++LDLS N + G + ++ + ++ H ++S N+LCG IP G +P +F +N CLCG PLK C Sbjct: 23 SCTENDKNALLQIKKALGNP--PLLSSWNPRTDCCTGWTGVEC--TNRRVT-----GLSVT------------SGEVSGQISYQIGDLVDLRTLDFSYLPHLTGNIPRTITKLKNLNTLYLKHTSLSGPIPDYISELKSLTFLDLSFNQFTGPIPGSLSQMPKLEAIQINDNKLTGSIPNSFGSFVGNVPNLYLSNNKLSGKIPESLSK-YDFNAVDLSGNGFEGDAFMFFGR-----------NKTTVRV------------DLSRNMFNFDLVKVKFARS-IVSLDLSQNHIYGKIPPAL-TKLHLEHFNVSDNHLCGKIPSGGLLQTFEPSAFAHNICLCGTPLKAC 325
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis OX=23211 GN=PGIP PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.586e-40 Identity = 107/348 (30.75%), Postives = 160/348 (45.98%), Query Frame = 1 Query: 85 CPPSEWAALMAFKAALTEPNIGIFNSWRGTNCCYHWYGINCDPTTHRVADITLRGLTIADDNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGK-LKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCGHPLKPC 1125 C P + L+ K A +P + SW+ C WY + CD TT+R+ +T+ G ++G I + L L TL ++G I I L L+ + LS +SG VP + L LT L+L+ N+++G IP +L LPNL L L N + G IP FG+ + + + LSHN+++G IP S + + IDLS N+L G G L+ +DLSRN+L N++ V S +LD++HN++ G + + L++S+N LCG IP G S+ +NRCLCG PL C Sbjct: 27 CNPDDKKVLLQIKKAFGDPYV--LASWKSDTDCCDWYCVTCDSTTNRINSLTIFA-----------------GQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIPISFGQFIGNVPDLYLSHNQLSGNIPTSFAQM-DFTSIDLSRNKLEGDASVIFG-----------------------LNKTTQIVDLSRNLLEFNLSKVEFPTS-LTSLDINHNKIYGSIPVEFTQLNF-QFLNVSYNRLCGQIPVGGKLQSFDEYSYFHNRCLCGAPLPSC 329
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=FOR1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.661e-40 Identity = 112/349 (32.09%), Postives = 176/349 (50.43%), Query Frame = 1 Query: 85 CPPSEWAALMAFKAALTEPNIGIFNSWRGTNCCYHWYGINCDPTTHRVADITLRGLTIADDNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPR--GAPFNHLQPPSFDNNRCLCGHPLKPC 1125 CPPS+ ALM K +L P S +CC W + CD RV ++ + G A+D + G I ++ L L +L++ G+SG IP C+T LS LQF+ +S +SG +P + + L ++L+ N ++G IP + +LPNL LDLR+N + G IP + + ++LS+N++TGPIPR + + +DLS NRL+G + ++L +N+L DLS+ + E +Y LDLSHN + G V +S+ + + + LDLS+N LCGP+PR G + +P +++N+C G PL C Sbjct: 27 CPPSDKQALMRVKQSLGNPATLSTWSLASADCC-EWDHVRCD-EAGRVNNVFIDG---AND-------------VRGQIPSAVAGLTALMSLSLFRLPGLSGPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPAGLVQ-GQFRSLILSYNQLTGPIPRD-DAQDEINTVDLSHNRLTGDASFLFAAGRPIGKVDLSWNDL--------------DFDLSKLVFP-------PELTY---LDLSHNRIRGTVPRSLAALSTLQTLDLSYNRLCGPLPRLHGVIRHGCKP--YEHNQCAGGAPLGGC 329
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: MIK2_ARATH (MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 9.303e-40 Identity = 104/314 (33.12%), Postives = 154/314 (49.04%), Query Frame = 1 Query: 274 HVTTNRTATGYMNGSISPSICKLKQLSTLTISD---------------------WKG--ISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLS-SRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCG-----HPLKPCT 1128 +T + T G + +IC+ +L LT+ D +KG SG+I L FIDLS N G++ + +L L++N I+G IP + N+ L LDL +N + G +P + +++++ L+ NR++G IP I + +L +DLS NR S + + +P L +NL N+L IP L S++ LDLS N L G I+ FR LDLSHN LSG + S + H+D+SHNNL GPIP A F + P +F+ N+ LCG LKPC+ Sbjct: 383 ELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLCGSVNTTQGLKPCS 696 HSP 2 Score: 136.346 bits (342), Expect = 1.352e-33 Identity = 105/334 (31.44%), Postives = 170/334 (50.90%), Query Frame = 1 Query: 82 SCPPSEWAALMAFKAALT-EPNIGIFNSWRGTNC---CYHWYGINCDPTTHRVADITLRGLTIADDN------PHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLSSR-ISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRG 1050 S E AL+ +K+ T + + +SW N C WYG+ C + ++T G+ ++ P++T + +G+ISP + +L +S + G IP + LS L + L N ++G +P +IG L ++T + + DN ++G IP + NL L+ L L N++ G IP + G L L + L N +TG IP S ++ ++ +++ N+LSG + +G M LD+L+L N LTG IP TL + + ++ L L N L+G+I E I+L++S N+L+G V S T + L L N L GPIP G Sbjct: 45 SATVEEANALLKWKSTFTNQTSSSKLSSWVNPNTSSFCTSWYGVACSLGSIIRLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSKLEYFDLS-INQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPG 377 HSP 3 Score: 127.487 bits (319), Expect = 1.338e-30 Identity = 84/262 (32.06%), Postives = 142/262 (54.20%), Query Frame = 1 Query: 265 DNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLS-SRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPR 1047 D H+ N+ +NGSI I +L +++ + I D ++G IP L+ L + L N +SG +P +IG+L L L L N+++G+IP + NL N+ +L++ N + G IPP+ G + L+ + L N++TGPIP ++ +I +LA + L LN+L+GS+ +G+M + L + N LTG +P + + + L L N LSG I + L L N +GF+ ++ + +L L N+ GP+P+ Sbjct: 169 DTLHLVENK-----LNGSIPSEIGRLTKVTEIAIYD-NLLTGPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPK 424 HSP 4 Score: 102.834 bits (255), Expect = 2.779e-22 Identity = 75/253 (29.64%), Postives = 121/253 (47.83%), Query Frame = 1 Query: 298 TGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIP--WTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRG 1050 T + G I ++ +K L+ L + ++G+IP + + + +++S N ++G VP G L L L L DN +SG IP + N L +L L N G +P + KL + L N GP+P+S+ SL + N SG + + G P L+ ++L NN G++ W S ++ LS N ++G I + LDLS N ++G + +S+ + I L L+ N L G IP G Sbjct: 295 TNKLTGPIPSTLGNIKTLAVLHLY-LNQLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWE-QSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSG 545
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PGIP1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.499e-37 Identity = 106/350 (30.29%), Postives = 159/350 (45.43%), Query Frame = 1 Query: 85 CPPSEWAALMAFKAALTEPNIGIFNSWRGTNCCYHWYGINCDPTT--HRVADITLRGLTIADDNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKL-KKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCGHPLKPC 1125 C ++ L+ K +L P SW C WY + C T HRV +T+ +G ++G I + L L TL ++G I I L L+ + LS ++G +P I L L L L+ N +SG IP +L LP ++ L+L N + G IP FG + + LSHN+++GPIP+S+ +I IDLS N+L G G + K W++ DLSRNM +I+ V ++ I LDL+HN ++G + A + ++S+N LCG IP G S+ +N+CLCG PL+ C Sbjct: 25 CNQNDKNTLLKIKKSLNNPYH--LASWDPQTDCCSWYCLECGDATVNHRVTALTI-----------------FSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFPGTVPDLRLSHNQLSGPIPKSLGNI-DFNRIDLSRNKLQGDASMLFG---------------SNKTTWSI--------DLSRNMFQFDISKVDIPKTLGI-LDLNHNGITGNIPVQWTEAP-LQFFNVSYNKLCGHIPTGGKLQTFDSYSYFHNKCLCGAPLEIC 329
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: PGIP2_PHAVU (Polygalacturonase inhibitor 2 OS=Phaseolus vulgaris OX=3885 GN=PGIP2 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.354e-36 Identity = 105/355 (29.58%), Postives = 164/355 (46.20%), Query Frame = 1 Query: 79 ESCPPSEWAALMAFKAALTEPNIGIFNSWR-GTNCCYH-WYGINCDP--TTHRVADITLRGLTIADDNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKL-NRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCGHPLKPCT 1128 E C P + AL+ K L P +SW T+CC W G+ CD T+RV ++ L GL + P I S+ L L+ L I + G IP I L+ L ++ ++ +SG +P + + L L+ + N +SG +P ++ +LPNL+ + N + G IP +G KL + +S NR+TG IP + +++ +LA +DLS N L G G ++L N+L DL + LS N+ LDL +N + G + + + ++ L++S NNLCG IP+G ++ NN+CLCG PL CT Sbjct: 30 ELCNPQDKQALLQIKKDLGNPTT--LSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP---------------IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA--------------FDLGKVGLSKNLN----------GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPACT 342
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana OX=3702 GN=FLS2 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 8.838e-36 Identity = 94/271 (34.69%), Postives = 142/271 (52.40%), Query Frame = 1 Query: 382 ISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDF-GKLKKLNRVL-LSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLS--SRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCG--HPLKPCT-----HHHHQHTRIKL 1161 + G IP + + LL +DLS N SG++P L LT L+L N +G IP +L +L L D+ +N + G IP + LK + L S+N +TG IP+ + + + +IDLS N SGS+ + + + +L+ NNL+G IP + I L+LSRN SG I F ++ ++LDLS N L+G + +S+ + + + HL L+ NNL G +P F ++ N LCG PLKPCT H + TR+ L Sbjct: 539 LEGPIPEEMFDMKLLSVLDLSNNKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCGSKKPLKPCTIKQKSSHFSKRTRVIL 809 HSP 2 Score: 133.265 bits (334), Expect = 1.719e-32 Identity = 103/349 (29.51%), Postives = 161/349 (46.13%), Query Frame = 1 Query: 97 EWAALMAFKAALTEPNIGIFNSWRGTNCCYH--WYGINCDPTTHRVADITLRGLTIADDNPHVT----------TNRTATG--------------------YMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLS-SRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIP 1044 E AL +FK ++ +G+ + W H W GI CD T H V+ L +P + T+ + TG Y +GSI I +LK + L + + +SG++P I S L I N ++GK+P +G L L + A NH++G IP ++ L NL LDL N + G IP DFG L L ++L+ N + G IP I + SL ++L N+L+G + +G + L +L + N LT IP +L ++++HL LS N L G I++ L L N +G +S+ + + L + NN+ G +P Sbjct: 30 EIEALKSFKNGISNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFYLDLRN-NLLSGDVPEEICKTSSLVLIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSIPVSIGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELP 377 HSP 3 Score: 105.531 bits (262), Expect = 3.498e-23 Identity = 85/274 (31.02%), Postives = 138/274 (50.36%), Query Frame = 1 Query: 307 MNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSI--------YS----------------LADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLS-SRISHLDLSRNMLSGNIADVFRE--RSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPR 1047 + G I SI L L +S + ++G IP ++L FI + N +G++P DI + + L L++ADN+++G + + L L IL + N++ GPIP + G LK LN + L N TG IPR +S++ YS L+ +DLS N+ SG + ++ L L+L+ N G IP +L S S ++ D+S N+L+G I ++ + L+ S+N L+G + K + + +DLS+N G IPR Sbjct: 396 LTGPIPSSISNCTGLKLLDLSHNQ-MTGEIPRGFGRMNL-TFISIGRNHFTGEIPDDIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPR 667 HSP 4 Score: 100.908 bits (250), Expect = 1.173e-21 Identity = 76/271 (28.04%), Postives = 129/271 (47.60%), Query Frame = 1 Query: 307 MNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKLNRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQM---------------PV---------LDSLNLKYNNLTGKIPWTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPR 1047 + G I L L +L +++ + G+IP I S L ++L N ++GK+P ++G+L QL L + N ++ IP +L L L L L N + GPI + G L+ L + L N TG P+SI+++ +L + + N +SG + +G + P+ L L+L +N +TG+IP ++ + + RN +G I D S L ++ N L+G + + + L +S+N+L GPIPR Sbjct: 228 LTGKIPRDFGNLLNLQSLVLTE-NLLEGDIPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNLSAHDNLLTGPIPSSISNCTGLKLLDLSHNQMTGEIPRGFGRMNLTFISIGRNHFTGEIPDDIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPR 497
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Match: PGIP3_PHAVU (Polygalacturonase inhibitor 3 OS=Phaseolus vulgaris OX=3885 GN=PGIP3 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.413e-35 Identity = 104/355 (29.30%), Postives = 163/355 (45.92%), Query Frame = 1 Query: 79 ESCPPSEWAALMAFKAALTEPNIGIFNSWR-GTNCCYH-WYGINCDP--TTHRVADITLRGLTIADDNPHVTTNRTATGYMNGSISPSICKLKQLSTLTISDWKGISGNIPHCITTLSLLQFIDLSGNIISGKVPYDIGHLAQLTVLNLADNHISGRIPRTLVNLPNLMILDLRNNAMEGPIPPDFGKLKKL-NRVLLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHK*MGQMPVLDSLNLKYNNLTGKIPWTLLSSRISHLDLSRNMLSGNIADVFRERSYFINLDLSHNELSGFVAKSMVSATYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCGHPLKPCT 1128 E C P + AL+ K L P +SW T+CC W G+ CD T+RV ++ L G + P I S+ L L+ L I + G IP I L+ L ++ ++ +SG +P + + L L+ + N +SG +P ++ +LPNL+ + N + G IP +G KL + +S NR+TG IP + +++ +LA +DLS N L G G ++L N+L DL + LS N+ LDL +N + G + + + ++ L++S NNLCG IP+G ++ NN+CLCG PL CT Sbjct: 30 ELCNPQDKQALLQIKKDLGNPTT--LSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNLPKPYP---------------IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLQGDASVLFGSDKNTQKIHLAKNSL--------------DFDLEKVGLSKNLN----------GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPACT 342 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23510 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23510_La_Tanjil_v1.0 ID=rna-TanjilR_23510_La_Tanjil_v1.0; Name=rna-TanjilR_23510; organism=Lupinus angustifolius; type=mRNA; length=1164bpback to top protein sequence of rna-TanjilR_23510_La_Tanjil_v1.0 >rna-TanjilR_23510_La_Tanjil_v1.0 ID=rna-TanjilR_23510_La_Tanjil_v1.0; Name=rna-TanjilR_23510_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=363bpback to top mRNA from alignment at Chr_LG08-CM007368.1:24213569..24214732- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23510_La_Tanjil_v1.0 ID=rna-TanjilR_23510_La_Tanjil_v1.0; Name=rna-TanjilR_23510; organism=Lupinus angustifolius; type=mRNA; length=1164bp; location=Sequence derived from: Chr_LG08-CM007368.1:24213569..24214732- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24213569..24214732- >rna-TanjilR_23510_La_Tanjil_v1.0 ID=rna-TanjilR_23510_La_Tanjil_v1.0; Name=rna-TanjilR_23510; organism=Lupinus angustifolius; type=CDS; length=1092bp; location=Sequence derived from: Chr_LG08-CM007368.1:24213569..24214732- (Lupinus angustifoliusback to top |