rna-TanjilR_23403
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana OX=3702 GN=SCPL34 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.113e-29 Identity = 48/72 (66.67%), Postives = 56/72 (77.78%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFDVYKLIDMYSLYAPRC 3949
IGNALLDDETDQKGMI+YAWDHAVISD LY + C+F + C LD+YFDVYK++DMYSLYAP+C
Sbjct: 233 IGNALLDDETDQKGMIEYAWDHAVISDALYEKVNKNCDFKQKLVTKECNDALDEYFDVYKILDMYSLYAPKC 304 HSP 2 Score: 45.8246 bits (107), Expect = 2.113e-29 Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 3
Query: 3525 LYIYDDDYISGHYVPQLSELILDNNHNPTKEDYINFKGFLV 3647
YI + Y +GHYVPQLSELI N +K+D+IN KG ++
Sbjct: 194 FYIAGESY-AGHYVPQLSELIYKENKIASKKDFINLKGLMI 233 HSP 3 Score: 104.375 bits (259), Expect = 1.723e-21 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 1
Query: 58 VVAEQEADRVHGLPGQPTVKFKQYAGYVTVNKTHGRALFYWFFESTEKSQDKPLLLWLNGG 240
V+A Q ADRV LPGQP VKF+QYAGYVTVN+THGRALFYWFFE+T+ KP+LLWLNGG
Sbjct: 43 VLAAQRADRVKELPGQPPVKFRQYAGYVTVNETHGRALFYWFFEATQNPSKKPVLLWLNGG 103 HSP 4 Score: 101.293 bits (251), Expect = 1.470e-20 Identity = 51/98 (52.04%), Postives = 61/98 (62.24%), Query Frame = 2
Query: 3167 ATNLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAG 3460
A NLLF+ESPVGVGFSYTNTS DI +LGDT+T A+DS+NF++NWFKRFPQ++SH+FYIAGESYAG
Sbjct: 140 AANLLFLESPVGVGFSYTNTSRDIKQLGDTVT----------------------------------ARDSYNFLVNWFKRFPQYKSHDFYIAGESYAG 203 HSP 5 Score: 81.6481 bits (200), Expect = 2.471e-14 Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 5497 VGGWTIVYDGLTFVTIRGAGHQVPTFAPKQALQLIQHFLDNNKLPPHPI 5643
VGGWT+ YDGL FVT+RGAGHQVPTF P++ALQLI HFL N KLP P
Sbjct: 451 VGGWTVEYDGLMFVTVRGAGHQVPTFKPREALQLIHHFLGNKKLPTFPF 499 HSP 6 Score: 75.8702 bits (185), Expect = 1.598e-12 Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 3
Query: 4494 QDGWHKIAAAGYDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHC 4634
+GW ++AA GYDPCAS+YTE Y+NR +VQ+ALHANVT I YPWTHC
Sbjct: 338 NEGWRRMAA-GYDPCASEYTEKYMNRKDVQEALHANVTNISYPWTHC 383 HSP 7 Score: 72.7886 bits (177), Expect = 1.545e-11 Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 5065 LFVHMHSGDTDGRIPVTATRYTLRKLGLNVVQDWTPWYTSQQV 5193
L V + SGDTDGRIPVTATRY+L+KLGL +VQDWTPWYT QV
Sbjct: 409 LRVWVFSGDTDGRIPVTATRYSLKKLGLKIVQDWTPWYTKLQV 451 HSP 8 Score: 69.707 bits (169), Expect = 1.372e-10 Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 3
Query: 2781 GCSSVGYGEAEELGPFFPQKSNHPKLKLNPYSWNK 2885
GCSS+G+G AEELGPFFPQ S+ PKLKLNPYSWNK
Sbjct: 105 GCSSIGFGAAEELGPFFPQNSSQPKLKLNPYSWNK 139
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana OX=3702 GN=SCPL33 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 6.040e-22 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFDVYKLIDMYSLYAPRCFSNQSS 3967
+GN L DDE D KG+++YAW HAVISD LY + C+F N S+ C + ++ F YK ID+Y++YAP+C SN SS
Sbjct: 221 VGNPLTDDEYDNKGILEYAWSHAVISDHLYDSAKHNCDFKSSNWSEPCNVAMNTVFTKYKEIDIYNIYAPKCISNSSS 298 HSP 2 Score: 41.9726 bits (97), Expect = 6.040e-22 Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 3
Query: 3525 LYIYDDDYISGHYVPQLSELILDNNHNPTKEDYINFKGFLV 3647
+I + Y +GHY PQL+ELI D N K+ +IN KGF+V
Sbjct: 182 FFIAGESY-AGHYSPQLAELIYDRNKVQPKDSFINLKGFIV 221 HSP 3 Score: 76.6406 bits (187), Expect = 8.814e-13 Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 2
Query: 3170 TNLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAG 3460
N+LF+ESPVGVGFSYTN+SSD+ L D A+D++NF++ WF R+PQ++S +F+IAGESYAG
Sbjct: 129 ANMLFLESPVGVGFSYTNSSSDLENLNDAFV----------------------------------AEDAYNFMVAWFARYPQYKSRDFFIAGESYAG 191 HSP 4 Score: 63.929 bits (154), Expect = 8.868e-9 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 61 VAEQEADRVHGLPGQP-TVKFKQYAGYVTVNKTHGRALFYWFFES-TEKSQDKPLLLWLNGG 240
+ Q +D+V LP QP K ++GYV VN+ + R+LF+WFFE+ +E +PL+LWLNGG
Sbjct: 31 IEAQNSDKVVNLPEQPLNPKISHFSGYVNVNQENTRSLFFWFFEALSESPSTRPLVLWLNGG 92
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana OX=3702 GN=SCPL39 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.525e-20 Identity = 37/96 (38.54%), Postives = 48/96 (50.00%), Query Frame = 2
Query: 3173 NLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAG 3460
N+LF+ESPVG GFSYTNT SD+ GD + A D + F++ W +RFP+++ EFYIAGESYAG
Sbjct: 168 NILFLESPVGTGFSYTNTESDLENPGD----------------------------------MKAAADKYIFLVKWLERFPEYKGREFYIAGESYAG 229 HSP 2 Score: 37.7354 bits (86), Expect = 1.525e-20 Identity = 20/74 (27.03%), Postives = 31/74 (41.89%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFDVYKLIDMYSLYAPRCFS 3955
IGN L+D + G DY HA++S + C P C K D K +++Y++ P C +
Sbjct: 256 IGNPTLNDIVETTGSFDYLVSHALLSQDSLLSYKENCATDTPKMEVDCIALSMKIDDDIKKMNLYNILTPTCIN 329 HSP 3 Score: 36.965 bits (84), Expect = 1.525e-20 Identity = 18/40 (45.00%), Postives = 28/40 (70.00%), Query Frame = 3
Query: 3528 YIYDDDYISGHYVPQLSELILDNNHNPTKEDYINFKGFLV 3647
YI + Y +GHYVPQL++ IL +N N +++IN +G L+
Sbjct: 221 YIAGESY-AGHYVPQLAQTILVHNKN---QNFINLRGILI 256 HSP 4 Score: 80.1073 bits (196), Expect = 9.736e-14 Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 67 EQEADRVHGLPGQPTVKFKQYAGYVTVNKTHGRALFYWFFESTEKSQDKPLLLWLNGG 240
++E D + LPGQP+V F+QY GYVTVN++ GR+L+Y+F E+T+ + PL+LWLNGG
Sbjct: 74 QKERDLIENLPGQPSVSFRQYGGYVTVNESAGRSLYYYFVEATKTKKSLPLVLWLNGG 131
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP26_ORYSJ (Serine carboxypeptidase-like 26 OS=Oryza sativa subsp. japonica OX=39947 GN=SCP26 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.113e-20 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFDVYKLIDMYSLYAPRCFSNQSSTT 3973
+GN L DD D KG+ +YAW HA++SD +Y I CNF N +D C ++ F Y ID+Y++YAP+C N +S +
Sbjct: 227 VGNPLTDDYYDSKGLAEYAWSHAIVSDQVYERIKKTCNFKNSNWTDDCNAAMNIIFSQYNQIDIYNIYAPKCLLNSTSAS 306 HSP 2 Score: 42.3578 bits (98), Expect = 6.113e-20 Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 3
Query: 3525 LYIYDDDYISGHYVPQLSELILDNNHNPTKEDYINFKGFLVN 3650
YI + Y +GHYVPQL++L+ + N + YIN KGF+V
Sbjct: 188 FYISGESY-AGHYVPQLADLVYERNKDKRASTYINLKGFIVG 228 HSP 3 Score: 83.1889 bits (204), Expect = 7.552e-15 Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 2
Query: 3170 TNLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAG 3460
NLLF+ESPVGVGFSYTNTSSD++ L D A+D+++F++NWFKRFPQ++ +EFYI+GESYAG
Sbjct: 135 ANLLFLESPVGVGFSYTNTSSDLSNLNDDFV----------------------------------AEDAYSFLVNWFKRFPQYKDNEFYISGESYAG 197 HSP 4 Score: 80.1073 bits (196), Expect = 8.373e-14 Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 67 EQEADRVHGLPGQP-TVKFKQYAGYVTVNKTHGRALFYWFFE--STEKSQDKPLLLWLNGG 240
EQEADRV LPGQP + Q+AGYV V++ HGRALFYWFFE ++ + KPLLLWLNGG
Sbjct: 38 EQEADRVARLPGQPASPAVSQFAGYVGVDERHGRALFYWFFEAQASPAPEKKPLLLWLNGG 98
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana OX=3702 GN=SCPL35 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.688e-18 Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFS--LPNSSDACTMELDKYFDVYKLIDMYSLYAPRCFSNQSSTT-REPHVIKGVAPHTFSKFVSFFQLNY 4048
IGNA++++ TD G++DYAW HA+ISD ++ +I +C+F N ++ C + D Y ID+YS+Y P C S+ S++ R+P ++ TF F Y
Sbjct: 221 IGNAVINEATDMAGLVDYAWSHAIISDEVHTSIHGSCSFEEDTTNKTEQCYNNFKGFMDAYNDIDIYSIYTPVCLSSLLSSSPRKPKIVVSPRLLTFDDLWDKFPAGY 328 HSP 2 Score: 45.8246 bits (107), Expect = 2.688e-18 Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 3
Query: 3525 LYIYDDDYISGHYVPQLSELILDNNHNPTKEDYINFKGFLV 3647
YI + Y +GHYVPQL+E+I D N TK+ IN KGF++
Sbjct: 182 FYISGESY-AGHYVPQLAEVIYDRNKKVTKDSSINLKGFMI 221 HSP 3 Score: 81.6481 bits (200), Expect = 2.793e-14 Identity = 43/97 (44.33%), Postives = 53/97 (54.64%), Query Frame = 2
Query: 3170 TNLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAG 3460
N+LF+E+PVGVGFSYTN S D+ +LGD +T A DS F+INWF +FP+FRS EFYI+GESYAG
Sbjct: 129 ANMLFLEAPVGVGFSYTNNSMDLQKLGDEVT----------------------------------ASDSLAFLINWFMKFPEFRSSEFYISGESYAG 191 HSP 4 Score: 74.7146 bits (182), Expect = 3.889e-12 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 64 AEQEADRVHGLPGQPTVKFKQYAGYVTVNKTHG-RALFYWFFESTEKSQDKPLLLWLNGG 240
+E D V GLPGQP V FK YAGYV + +ALFYWFFE+ + S +PL+LWLNGG
Sbjct: 33 GRKEDDLVTGLPGQPPVNFKHYAGYVNLGPEQKQKALFYWFFEAQQNSSRRPLVLWLNGG 92 HSP 5 Score: 58.151 bits (139), Expect = 5.712e-7 Identity = 27/46 (58.70%), Postives = 31/46 (67.39%), Query Frame = 3
Query: 4497 DGWHKIAAAGYDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHC 4634
D W K A GYDPC Y E Y NR +VQ ALHANVT +PYP++ C
Sbjct: 319 DLWDKFPA-GYDPCTESYAENYFNRKDVQVALHANVTNLPYPYSPC 363
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana OX=3702 GN=SCPL24 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.827e-17 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 7 LICLTKHVLSSSYLSHDVVAEQEADRVHGLPGQPTVKFKQYAGYVTVNKTHGRALFYWFFESTEKS-QDKPLLLWLNGG 240
+ L +LS+++ S EQE DR+ LPGQP V F QY+GYV VN++HGRALFYW ES+ S KPLLLWLNGG
Sbjct: 7 IFLLLVALLSTTFPSSSSSREQEKDRIKALPGQPKVAFSQYSGYVNVNQSHGRALFYWLTESSSPSPHTKPLLLWLNGG 85 HSP 2 Score: 60.077 bits (144), Expect = 3.423e-12 Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFD-VYKLIDMYSLYAPRCFSNQ 3961
+GNA+ D++ D G + Y W HA+ISD Y +I CNF++ SD C ++ + + ID YS+Y P C + Q
Sbjct: 213 VGNAVTDNQYDSIGTVTYWWTHAIISDKSYKSILKYCNFTVERVSDDCDNAVNYAMNHEFGDIDQYSIYTPTCVAAQ 289 HSP 3 Score: 36.1946 bits (82), Expect = 3.423e-12 Identity = 27/60 (45.00%), Postives = 33/60 (55.00%), Query Frame = 3
Query: 3486 HLISL*NNIFAFGLYIYDDDYISG-----HYVPQLSELILDNNHNPTKEDYINFKGFLVN 3650
+LI L + F Y Y D YI+G HYVPQL++ I D N +K IN KGFLV
Sbjct: 156 NLIFLIKWLSRFPQYKYRDFYIAGESYAGHYVPQLAKKINDYNKAFSKP-IINLKGFLVG 214 HSP 4 Score: 72.4034 bits (176), Expect = 1.994e-11 Identity = 40/96 (41.67%), Postives = 50/96 (52.08%), Query Frame = 2
Query: 3173 NLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAG 3460
NLLF+ESP GVG+SYTNTSSD+ + GD T A+D+ F+I W RFPQ++ +FYIAGESYAG
Sbjct: 123 NLLFLESPAGVGYSYTNTSSDLKDSGDERT----------------------------------AQDNLIFLIKWLSRFPQYKYRDFYIAGESYAG 184 HSP 5 Score: 64.6994 bits (156), Expect = 4.629e-9 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 5497 VGGWTIVYDGLTFVTIRGAGHQVPTFAPKQALQLIQHFLDNNKLP 5631
VGGWT VY GLTF T+RGAGH+VP F PK+AL L + FL +LP
Sbjct: 418 VGGWTEVYKGLTFATVRGAGHEVPLFEPKRALILFRSFLAGKELP 462 HSP 6 Score: 59.6918 bits (143), Expect = 1.725e-7 Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 3
Query: 4521 AGYDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHC 4634
+GYDPC Y E Y NRP+VQ+A+HANVT I Y WT C
Sbjct: 312 SGYDPCTESYAEKYFNRPDVQRAMHANVTGIRYKWTAC 349
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana OX=3702 GN=SCPL31 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 7.352e-17 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 4 VLICLTKHVLSSSYLSHDVVAEQEADRVHGLPGQPTVKFKQYAGYVTVNKTHGRALFYWFFESTEKSQDKPLLLWLNGG 240
V+IC +H S S + E D V GLPGQP V F+ YAGYV V++++GRA+FYWFFE+ + ++KPL+LWLNGG
Sbjct: 27 VVICTRQHRFDSPKRS---LLANEQDLVTGLPGQPDVSFRHYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGG 102 HSP 2 Score: 76.2554 bits (186), Expect = 1.221e-12 Identity = 40/97 (41.24%), Postives = 53/97 (54.64%), Query Frame = 2
Query: 3170 TNLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAG 3460
N+LF+ESPVGVGFSY+NTSSD +LGD T A+D++ F+ NWF++FP+ + + FYIAGESYAG
Sbjct: 139 ANMLFLESPVGVGFSYSNTSSDYQKLGDDFT----------------------------------ARDAYTFLCNWFEKFPEHKENTFYIAGESYAG 201 HSP 3 Score: 63.929 bits (154), Expect = 2.307e-10 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPN--SSDACTMELDKYFDVYKLIDMYSLYAPRCFSNQSSTT 3973
+GN D D +G +DYAW HAVISD + IT CNFS N S+D C + + Y ID+YS+Y C + + ++
Sbjct: 234 LGNPETSDAEDWRGWVDYAWSHAVISDETHRIITRTCNFSSDNTWSNDECNEAVAEVLKQYHEIDIYSIYTSVCIGDSARSS 315 HSP 4 Score: 25.7942 bits (55), Expect = 2.307e-10 Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 3
Query: 3525 LYIYDDDYISGHYVPQLSELILDNNHNPTKED---YINFKGFLVN 3650
YI + Y +G YVP+L+E++ DNN+N K +IN KG L+
Sbjct: 192 FYIAGESY-AGKYVPELAEVVYDNNNNNKKNGSSFHINLKGILLG 235
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana OX=3702 GN=SCPL30 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 2.629e-16 Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 70 QEADRVHGLPGQPTVKFKQYAGYVTVNKTHGRALFYWFFESTEKSQDKPLLLWLNGG 240
+EAD V LPGQP V FK YAGYV V+K++GRALFYWFFE+ + ++KPL+LWLNGG
Sbjct: 40 KEADLVTNLPGQPDVSFKHYAGYVPVDKSNGRALFYWFFEAMDLPKEKPLVLWLNGG 96 HSP 2 Score: 72.7886 bits (177), Expect = 1.451e-11 Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 2
Query: 3170 TNLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAGI 3463
N+LF+ESPVGVGFSY+NTSSD L D +FA KD++ F+ NWF++FP+ + +EFYIAGESYAGI
Sbjct: 133 VNMLFLESPVGVGFSYSNTSSDYLNLDD----HFA------------------------------KKDAYTFLCNWFEKFPEHKGNEFYIAGESYAGI 196 HSP 3 Score: 59.3066 bits (142), Expect = 3.351e-11 Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPN--SSDACTMELDKYFDVYKLIDMYSLYAPRCFSNQSSTT 3973
+GN + + D +G +DYAW HAVISD + NI CNFS + ++D C + + Y ID+YSLY C + + ++
Sbjct: 226 LGNPDISNPDDWRGWVDYAWSHAVISDETHRNINRLCNFSSDDVWNNDKCNEAIAEVDKQYNEIDIYSLYTSACKGDSAKSS 307 HSP 4 Score: 33.113 bits (74), Expect = 3.351e-11 Identity = 20/42 (47.62%), Postives = 27/42 (64.29%), Query Frame = 3
Query: 3525 LYIYDDDYISGHYVPQLSELILDNNH-NPTKEDYINFKGFLV 3647
YI + Y +G YVP+L+EL+ DNN N +IN KGFL+
Sbjct: 186 FYIAGESY-AGIYVPELAELVYDNNEKNNDLSLHINLKGFLL 226
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana OX=3702 GN=SCPL23 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 3.050e-16 Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 67 EQEADRVHGLPGQPTVKFKQYAGYVTVNKTHGRALFYWFFESTEKSQDKPLLLWLNGG 240
EQE D + LPGQP V F Q++GYVTVN++HGR+LFYW ES S KPLLLWLNGG
Sbjct: 25 EQEEDMIKALPGQPQVGFSQFSGYVTVNESHGRSLFYWLTESPSSSHTKPLLLWLNGG 82 HSP 2 Score: 70.0922 bits (170), Expect = 9.364e-11 Identity = 39/99 (39.39%), Postives = 50/99 (50.51%), Query Frame = 2
Query: 3164 TATNLLFVESPVGVGFSYTNTSSDINELGDTITGNFAICLTIISYISFSYLVI*FLDVKLYNQCLCPAKDSHNFVINWFKRFPQFRSHEFYIAGESYAG 3460
T N+LF+ESP GVGFSYTNTSSD+ + GD T A+++ F+I W RFPQ++ +FYI GESYAG
Sbjct: 117 TEANILFLESPAGVGFSYTNTSSDLKDSGDERT----------------------------------AQENLIFLIKWMSRFPQYQYRDFYIVGESYAG 181 HSP 3 Score: 64.6994 bits (156), Expect = 5.566e-9 Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 5497 VGGWTIVYDGLTFVTIRGAGHQVPTFAPKQALQLIQHFLDNNKLP 5631
VGGWT VY+GLTF TIRGAGH+VP P++AL L++ FL +LP
Sbjct: 407 VGGWTEVYEGLTFATIRGAGHEVPVLQPERALTLLRSFLAGKELP 451 HSP 4 Score: 59.6918 bits (143), Expect = 1.709e-7 Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 3
Query: 4527 YDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHCRF 4640
YDPC Y E+Y NRP+VQ+A+HAN+T IPY WT C
Sbjct: 303 YDPCTESYAEIYYNRPDVQRAMHANLTSIPYKWTLCNM 340 HSP 5 Score: 58.5362 bits (140), Expect = 4.276e-7 Identity = 27/79 (34.18%), Postives = 42/79 (53.16%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFDVYKLIDMYSLYAPRCFSNQSST 3970
+GN +D D+ G YAW HA+ISD Y +I C+F+ +SD C L + + ++ YS+Y+P C + T
Sbjct: 211 VGNGDMDKHYDRLGAAMYAWSHAMISDKTYKSILKHCSFTADKTSDKCNWALYFAYREFGKVNGYSIYSPSCVHQTNQT 289
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana OX=3702 GN=SCPL22 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.575e-16 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 67 EQEADRVHGLPGQPTVKFKQYAGYVTVNKTHGRALFYWFFESTEKS-QDKPLLLWLNGG 240
EQE DR+ LPGQP V F Q++GYVTVN++HGR+LFYW ES+ S KPLLLWLNGG
Sbjct: 25 EQEEDRIKALPGQPKVGFSQFSGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGG 83 HSP 2 Score: 56.6102 bits (135), Expect = 3.411e-11 Identity = 28/81 (34.57%), Postives = 40/81 (49.38%), Query Frame = 2
Query: 3734 IGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFDVYKLIDMYSLYAPRCFSNQSSTTR 3976
+GN +D D+ G I Y W HA+ISD Y+ I C+F+ S C + + ID YS+Y P+C Q T +
Sbjct: 211 VGNPEMDKNNDRLGTITYWWSHAMISDASYNRILKNCDFTADRFSKECDSAIYVAAADFGDIDQYSIYTPKCVPPQDQTNQ 291 HSP 3 Score: 36.1946 bits (82), Expect = 3.411e-11 Identity = 26/61 (42.62%), Postives = 34/61 (55.74%), Query Frame = 3
Query: 3486 HLISL*NNIFAFGLYIYDDDYI-----SGHYVPQLSELILDNNHNPTKEDYINFKGFLVNK 3653
+LI L + + F Y Y D YI +GHYVPQL++ I + N N K IN KGF+V
Sbjct: 154 NLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQLAQKIHEYN-NAYKNPVINLKGFMVGN 213 HSP 4 Score: 59.6918 bits (143), Expect = 1.707e-7 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 5497 VGGWTIVYDGLTFVTIRGAGHQVPTFAPKQALQLIQHFLDNNKL 5628
VGG T VY+GLTFVT+RGAGH+VP F P+ AL L++ FL N+L
Sbjct: 417 VGGRTEVYEGLTFVTVRGAGHEVPFFQPQSALILLRSFLAGNEL 460 HSP 5 Score: 59.6918 bits (143), Expect = 1.766e-7 Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 3
Query: 4527 YDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHC 4634
YDPC +Y E+Y NRPEVQ+A+HAN T IPY WT C
Sbjct: 311 YDPCTENYAEIYYNRPEVQRAMHANHTAIPYKWTAC 346 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23403 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23403_La_Tanjil_v1.0 ID=rna-TanjilR_23403_La_Tanjil_v1.0; Name=rna-TanjilR_23403; organism=Lupinus angustifolius; type=mRNA; length=5646bpback to top protein sequence of rna-TanjilR_23403_La_Tanjil_v1.0 >rna-TanjilR_23403_La_Tanjil_v1.0 ID=rna-TanjilR_23403_La_Tanjil_v1.0; Name=rna-TanjilR_23403_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=468bpback to top mRNA from alignment at Chr_LG08-CM007368.1:24952390..24958035+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23403_La_Tanjil_v1.0 ID=rna-TanjilR_23403_La_Tanjil_v1.0; Name=rna-TanjilR_23403; organism=Lupinus angustifolius; type=mRNA; length=5646bp; location=Sequence derived from: Chr_LG08-CM007368.1:24952390..24958035+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24952390..24958035+ >rna-TanjilR_23403_La_Tanjil_v1.0 ID=rna-TanjilR_23403_La_Tanjil_v1.0; Name=rna-TanjilR_23403; organism=Lupinus angustifolius; type=CDS; length=1407bp; location=Sequence derived from: Chr_LG08-CM007368.1:24952390..24958035+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|