rna-TanjilR_13884

Transcript Overview
Namerna-TanjilR_13884
Unique Namerna-TanjilR_13884_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1955
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG09-CM007369.1supercontigChr_LG09-CM007369.1:17967197..17969151 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL183Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL284Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL467Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccR1504Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1554Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1205Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1412Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR1028Pisum sativum Cameor genome v1aPisum sativum
anpvR1419Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1204Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1205Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1209Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1330Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR1359Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1178Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1231Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1217Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1153Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1162Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1158Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1163Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1336Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR1095Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1300Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1323Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1328Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1156Cicer arietinum
anccaR1149Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1162Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1323Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1327Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1331Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1249Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR1323Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1317Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1327Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1321Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1325Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1331Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR1165Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1168Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1172Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1448Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1463Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_11567.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigst.03G123900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_03G01368.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.03G196800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_032777Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr08.1995Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va07G054190.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun08g087400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun08g087400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_05039Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_13884gene-TanjilG_13884_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_13884rna-TanjilR_13884_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_13884_La_Tanjil_v1.0rna-TanjilR_13884_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_13884_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17969076..17969151rna-TanjilR_13884_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17969076..17969151Lupinus angustifoliusCDS
rna-TanjilR_13884_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17968711..17968996rna-TanjilR_13884_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17968711..17968996Lupinus angustifoliusCDS
rna-TanjilR_13884_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17967197..17967329rna-TanjilR_13884_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17967197..17967329Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_13884_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17969076..17969151rna-TanjilR_13884_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17969076..17969151Lupinus angustifoliusexon
rna-TanjilR_13884_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17968711..17968996rna-TanjilR_13884_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17968711..17968996Lupinus angustifoliusexon
rna-TanjilR_13884_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17967197..17967329rna-TanjilR_13884_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17967197..17967329Lupinus angustifoliusexon


Homology
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.521e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122

HSP 2 Score: 62.3882 bits (150), Expect = 4.482e-10
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct:  121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL2_ARATH (V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.665e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122

HSP 2 Score: 62.3882 bits (150), Expect = 4.397e-10
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct:  121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL4_ARATH (V-type proton ATPase subunit c4 OS=Arabidopsis thaliana OX=3702 GN=VHA-c4 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.665e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   29 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 123

HSP 2 Score: 62.3882 bits (150), Expect = 4.801e-10
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct:  122 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana OX=23013 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.733e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122

HSP 2 Score: 64.3142 bits (155), Expect = 1.126e-10
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct:  121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL_VIGRR (V-type proton ATPase 16 kDa proteolipid subunit OS=Vigna radiata var. radiata OX=3916 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.878e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   27 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

HSP 2 Score: 64.3142 bits (155), Expect = 1.103e-10
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct:  120 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL5_ARATH (V-type proton ATPase subunit c5 OS=Arabidopsis thaliana OX=3702 GN=VHA-c5 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   27 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

HSP 2 Score: 62.3882 bits (150), Expect = 4.265e-10
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct:  120 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL3_ARATH (V-type proton ATPase subunit c3 OS=Arabidopsis thaliana OX=3702 GN=VHA-c3 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   27 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

HSP 2 Score: 62.3882 bits (150), Expect = 4.265e-10
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct:  120 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL1_ARATH (V-type proton ATPase subunit c1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   27 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

HSP 2 Score: 62.3882 bits (150), Expect = 4.265e-10
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct:  120 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum OX=3544 GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.118e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122

HSP 2 Score: 63.929 bits (154), Expect = 1.148e-10
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct:  121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
[Close]
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris OX=161934 GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.118e-38
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 2 
Query:  158 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 442
            MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122

HSP 2 Score: 63.929 bits (154), Expect = 1.148e-10
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 1818 VRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 1952
            VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct:  121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_13884 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
VATL_GOSHI1.521e-38100.00V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH1.665e-38100.00V-type proton ATPase subunit c2 OS=Arabidopsis tha... [more]
VATL4_ARATH1.665e-38100.00V-type proton ATPase subunit c4 OS=Arabidopsis tha... [more]
VATL_KALDA1.733e-38100.00V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_VIGRR1.878e-38100.00V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL5_ARATH1.935e-38100.00V-type proton ATPase subunit c5 OS=Arabidopsis tha... [more]
VATL3_ARATH1.935e-38100.00V-type proton ATPase subunit c3 OS=Arabidopsis tha... [more]
VATL1_ARATH1.935e-38100.00V-type proton ATPase subunit c1 OS=Arabidopsis tha... [more]
VATL_MESCR2.118e-38100.00V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU2.118e-38100.00V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000245V-ATPase proteolipid subunitPRINTSPR00122VACATPASEcoord: 29..53
score: 82.74
coord: 106..132
score: 85.77
coord: 133..156
score: 82.68
coord: 55..79
score: 71.05
NoneNo IPR availableGENE3D1.20.120.610coord: 10..161
e-value: 3.3E-60
score: 204.0
NoneNo IPR availableCDDcd18175ATP-synt_Vo_c_ATP6C_rpt1coord: 12..79
e-value: 3.23813E-31
score: 105.31
NoneNo IPR availableCDDcd18176ATP-synt_Vo_c_ATP6C_rpt2coord: 88..155
e-value: 6.08373E-31
score: 104.51
IPR011555V-ATPase proteolipid subunit C, eukaryoticTIGRFAMTIGR01100TIGR01100coord: 12..120
e-value: 7.2E-52
score: 172.2
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 96..154
e-value: 3.1E-20
score: 72.3
coord: 16..75
e-value: 6.0E-14
score: 52.1
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 12..76
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 86..155

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_13884_La_Tanjil_v1.0 ID=rna-TanjilR_13884_La_Tanjil_v1.0; Name=rna-TanjilR_13884; organism=Lupinus angustifolius; type=mRNA; length=1955bp
ATGACAGGTTTCAGCGGCGATGAAACTGCTCCGTTCTTCGGCTTCCTCGG
CGCTGCCGCGGCTCTCGTTTTCTCATGTGAGTCACAACTTTTTCCGATAA
CTAAATCGATGAAATTTCATTTCATTTCATTGATTTTGATTTTGATTTGT
TATAGGTATGGGTGCTGCATATGGAACTGCAAAGAGTGGTGTTGGAGTGG
CATCTATGGGTGTGATGAGACCTGAGTTAGTTATGAAATCAATTGTTCCT
GTTGTTATGGCTGGAGTTCTTGGAATTTATGGATTGATTATTGCAGTTAT
TATTAGTACTGGTATTAACCCTAAGGCTAAATCTTATTATCTATTTGATG
GCTATGCTCACTTGTCTTCTGGTCTTGCTTGTGGTCTTGCTGGTCTATCT
GCTGGTATGGCTATTGGTATTGTTGGTGATGCTGGTGTCAGGTATCTTTT
CTTTTTATTTATTATCTGTTGTGCTGTGTTTTGAAAAAAAAAATGGAGTA
GTTGTATAAATAATTGATTATGATAGAATGATTGTTTTGTTTGGATATGT
TTGCTGAGAAGTGATTTTGAGATAATTTGTTTCATTTGAGATGTATCAAA
ATTCACTTTTGTATAGGAAATTACAACAAAGGATATGAAGTTGTTTGTAT
ATATTAATATTATGGTGCTTGTTTGGCAGATAGTTCAGCCGGGTTGAAAC
CTGATTGATTTATAGGAATCAGATTGTTTTTTTAAATAAGTTTGAAACTT
CAAGGTTAATGAAATGTGATTGATTTCATAGGAATCAGATTGTTTTTTTT
AAACTTCAAGGTTAATGTACCAAAACCCCCTCTTTTTCGTAATACAATCA
GGTTTGCCAAACATTTCAAATTGGACCTGAAACAATGTTTTTTTGTTTAT
ACAGTTTTGATCTTTATCAATTACCGAAGGAGCTCTTAGTTGCTACTCTA
TTTTTTCGTACTCTTATTCTTAATTGTAGTAAAGCTTGTGTGAACAGTGC
CTGAATGCATCATTGGGGTAAGACTAAGAAATAGTAAAATAAAATAAAAT
AGAAGTAATTGCTTGATATAAATGAAGCATGTAAATAATATGAAATGCAA
TGTTAACTGAGTTTGGTTTCCGACACAAGTTCAACTAATCAATCCCTTAT
CTTCCAATGTAATGTGTTGATAATTGGGTCAATTTTGATCTTGAAAAAAT
ATGCAGTGTTCAAGTAGTGCTTTAAACTAACAAACTTGTTATTCTTTGGA
TAAACTGTCATGTTGTTTCATGGACTTGGAAATGTATTAAGTTGCAATTT
GATTTGTTTAGTTATATAATTCAGTTTTTAAACTATTCAACATTCAATTC
CAACCAAATTATATGGCGAGCGAGAGATATTTTCAAGGGCCAATTTTACT
CCTATTTAAAATTTTCAAGTTGAATATGTCAAATACGTTACAAATTATGT
TATCTATCTTGGCTTATGAACACTTATTTCTTTACGGCTTTACCCACTTA
CTCCATTGAAGTTTTTTTGTTGCTTTGGAACTTAAGCTTTATTTCATATA
GTTTTGTTTCAAAGAAATGTTGATTTTCAGACACTTATCTGGTTTCTTAG
GGCTTGTCCATTTAATGGTTAATTTATTCCCTTTTGGCTGTTTAACTATG
TTATATTTTGTAAATGTCTTCTCATCTTGGTTTATTTACATTTTTTGTGC
ATGTGTGTTCATGCTTCTCATACTAAACTATCATATTAATATTATCCTTG
AATCTTTGCAATATACATGTTATTTGTTTACTGAATGCTTCGACACTGAG
TAAGGTGATTCCCTTTTGTCAGGGCTAATGCGCAGCAGCCGAAGCTGTTT
GTCGGTATGATTCTTATCTTGATTTTTGCTGAAGCTCTTGCTCTCTATGG
CCTCATTGTGGGTATCATCCTCTCATCCCGAGCAGGGCAATCCCGTGCTG
ACTAA
back to top

protein sequence of rna-TanjilR_13884_La_Tanjil_v1.0

>rna-TanjilR_13884_La_Tanjil_v1.0 ID=rna-TanjilR_13884_La_Tanjil_v1.0; Name=rna-TanjilR_13884_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=164bp
MTGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPEL
VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLA
CGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIV
GIILSSRAGQSRAD
back to top

mRNA from alignment at Chr_LG09-CM007369.1:17967197..17969151-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_13884_La_Tanjil_v1.0 ID=rna-TanjilR_13884_La_Tanjil_v1.0; Name=rna-TanjilR_13884; organism=Lupinus angustifolius; type=mRNA; length=1955bp; location=Sequence derived from: Chr_LG09-CM007369.1:17967197..17969151- (Lupinus angustifolius
ATGACAGGTTTCAGCGGCGATGAAACTGCTCCGTTCTTCGGCTTCCTCGG
CGCTGCCGCGGCTCTCGTTTTCTCATGTGAGTCACAACTTTTTCCGATAA
CTAAATCGATGAAATTTCATTTCATTTCATTGATTTTGATTTTGATTTGT
TATAGGTATGGGTGCTGCATATGGAACTGCAAAGAGTGGTGTTGGAGTGG
CATCTATGGGTGTGATGAGACCTGAGTTAGTTATGAAATCAATTGTTCCT
GTTGTTATGGCTGGAGTTCTTGGAATTTATGGATTGATTATTGCAGTTAT
TATTAGTACTGGTATTAACCCTAAGGCTAAATCTTATTATCTATTTGATG
GCTATGCTCACTTGTCTTCTGGTCTTGCTTGTGGTCTTGCTGGTCTATCT
GCTGGTATGGCTATTGGTATTGTTGGTGATGCTGGTGTCAGGTATCTTTT
CTTTTTATTTATTATCTGTTGTGCTGTGTTTTGAAAAAAAAAATGGAGTA
GTTGTATAAATAATTGATTATGATAGAATGATTGTTTTGTTTGGATATGT
TTGCTGAGAAGTGATTTTGAGATAATTTGTTTCATTTGAGATGTATCAAA
ATTCACTTTTGTATAGGAAATTACAACAAAGGATATGAAGTTGTTTGTAT
ATATTAATATTATGGTGCTTGTTTGGCAGATAGTTCAGCCGGGTTGAAAC
CTGATTGATTTATAGGAATCAGATTGTTTTTTTAAATAAGTTTGAAACTT
CAAGGTTAATGAAATGTGATTGATTTCATAGGAATCAGATTGTTTTTTTT
AAACTTCAAGGTTAATGTACCAAAACCCCCTCTTTTTCGTAATACAATCA
GGTTTGCCAAACATTTCAAATTGGACCTGAAACAATGTTTTTTTGTTTAT
ACAGTTTTGATCTTTATCAATTACCGAAGGAGCTCTTAGTTGCTACTCTA
TTTTTTCGTACTCTTATTCTTAATTGTAGTAAAGCTTGTGTGAACAGTGC
CTGAATGCATCATTGGGGTAAGACTAAGAAATAGTAAAATAAAATAAAAT
AGAAGTAATTGCTTGATATAAATGAAGCATGTAAATAATATGAAATGCAA
TGTTAACTGAGTTTGGTTTCCGACACAAGTTCAACTAATCAATCCCTTAT
CTTCCAATGTAATGTGTTGATAATTGGGTCAATTTTGATCTTGAAAAAAT
ATGCAGTGTTCAAGTAGTGCTTTAAACTAACAAACTTGTTATTCTTTGGA
TAAACTGTCATGTTGTTTCATGGACTTGGAAATGTATTAAGTTGCAATTT
GATTTGTTTAGTTATATAATTCAGTTTTTAAACTATTCAACATTCAATTC
CAACCAAATTATATGGCGAGCGAGAGATATTTTCAAGGGCCAATTTTACT
CCTATTTAAAATTTTCAAGTTGAATATGTCAAATACGTTACAAATTATGT
TATCTATCTTGGCTTATGAACACTTATTTCTTTACGGCTTTACCCACTTA
CTCCATTGAAGTTTTTTTGTTGCTTTGGAACTTAAGCTTTATTTCATATA
GTTTTGTTTCAAAGAAATGTTGATTTTCAGACACTTATCTGGTTTCTTAG
GGCTTGTCCATTTAATGGTTAATTTATTCCCTTTTGGCTGTTTAACTATG
TTATATTTTGTAAATGTCTTCTCATCTTGGTTTATTTACATTTTTTGTGC
ATGTGTGTTCATGCTTCTCATACTAAACTATCATATTAATATTATCCTTG
AATCTTTGCAATATACATGTTATTTGTTTACTGAATGCTTCGACACTGAG
TAAGGTGATTCCCTTTTGTCAGGGCTAATGCGCAGCAGCCGAAGCTGTTT
GTCGGTATGATTCTTATCTTGATTTTTGCTGAAGCTCTTGCTCTCTATGG
CCTCATTGTGGGTATCATCCTCTCATCCCGAGCAGGGCAATCCCGTGCTG
ACTAA
back to top

Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:17967197..17969151-

>rna-TanjilR_13884_La_Tanjil_v1.0 ID=rna-TanjilR_13884_La_Tanjil_v1.0; Name=rna-TanjilR_13884; organism=Lupinus angustifolius; type=CDS; length=495bp; location=Sequence derived from: Chr_LG09-CM007369.1:17967197..17969151- (Lupinus angustifolius
ATGACAGGTTTCAGCGGCGATGAAACTGCTCCGTTCTTCGGCTTCCTCGG
CGCTGCCGCGGCTCTCGTTTTCTCATGTATGGGTGCTGCATATGGAACTG
CAAAGAGTGGTGTTGGAGTGGCATCTATGGGTGTGATGAGACCTGAGTTA
GTTATGAAATCAATTGTTCCTGTTGTTATGGCTGGAGTTCTTGGAATTTA
TGGATTGATTATTGCAGTTATTATTAGTACTGGTATTAACCCTAAGGCTA
AATCTTATTATCTATTTGATGGCTATGCTCACTTGTCTTCTGGTCTTGCT
TGTGGTCTTGCTGGTCTATCTGCTGGTATGGCTATTGGTATTGTTGGTGA
TGCTGGTGTCAGGGCTAATGCGCAGCAGCCGAAGCTGTTTGTCGGTATGA
TTCTTATCTTGATTTTTGCTGAAGCTCTTGCTCTCTATGGCCTCATTGTG
GGTATCATCCTCTCATCCCGAGCAGGGCAATCCCGTGCTGACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000245ATPase_proteolipid_csu
IPR011555ATPase_proteolipid_su_C_euk
IPR002379ATPase_proteolipid_c-like_dom
IPR035921F/V-ATP_Csub_sf
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0033179proton-transporting V-type ATPase, V0 domain
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain