rna-TanjilR_01649
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GT7_ARATH (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=B3GALT7 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.958e-49 Identity = 81/154 (52.60%), Postives = 87/154 (56.49%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQ 1865
S TSNSILD+ ID E+AQHKDFLRL EHVEGYHELSAKTKIFFSTAVAKWDA+FY+KVDDDVHVNLGM L + L H RSKPRVYIGCMKSGPVL+Q
Sbjct: 166 SATSNSILDRAIDSEDAQHKDFLRL----------------------------EHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGM-----LASTLARH---------------------------RSKPRVYIGCMKSGPVLAQ 259 HSP 2 Score: 84.7297 bits (208), Expect = 2.958e-49 Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 1960 RDVKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
R VKYHEPE+WKFGE GNKYF HATGQIYAISKDLA YISINQ
Sbjct: 266 RTVKYHEPEYWKFGEDGNKYFRHATGQIYAISKDLANYISINQ 308 HSP 3 Score: 81.6481 bits (200), Expect = 1.167e-14 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 3
Query: 2463 RPILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGTPP 2573
+PILH+YANEDVSLG+WFIGLEVEHIDDR+ CCGTPP
Sbjct: 308 QPILHKYANEDVSLGSWFIGLEVEHIDDRNFCCGTPP 344 HSP 4 Score: 80.4925 bits (197), Expect = 2.463e-14 Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 2911 DCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAVWSYVL 3057
DC WKA+AG+VCVASF+WSCSGIC +VE +K VH C EG+ AVW+ +L
Sbjct: 345 DCRWKAEAGDVCVASFEWSCSGICKSVERMKIVHEVCSEGEGAVWNTLL 393 HSP 5 Score: 66.2402 bits (160), Expect = 9.488e-10 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 805 LNHSGSTLSSGLSPRDPY-------RKKVFIVIGINTAFSSRMRRDSVRATWMPQGKTV 960
L+ S STLSS S ++ RKKVF+V+GINTAFSSR RRDSVR TWMPQG+ +
Sbjct: 90 LDKSVSTLSSTRSSQEMVDGSETNPRKKVFMVMGINTAFSSRKRRDSVRETWMPQGEKL 148
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GT6_ARATH (Beta-1,6-galactosyltransferase GALT31A OS=Arabidopsis thaliana OX=3702 GN=GALT31A PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.307e-45 Identity = 71/155 (45.81%), Postives = 83/155 (53.55%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQK 1868
S++ +LD TI+ EE QHKDF RL H+EGYHELS+KT+I+FS+AVAKWDADFY+KVDDDVHVNLGM L + L H RSKPRVYIGCMKSGPVL+QK
Sbjct: 178 SSSPGGVLDHTIEAEEEQHKDFFRL----------------------------NHIEGYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGM-----LGSTLARH---------------------------RSKPRVYIGCMKSGPVLAQK 272 HSP 2 Score: 83.5741 bits (205), Expect = 1.307e-45 Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 1
Query: 1960 RDVKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
+ VKYHEPE+WKFGE+GNKYF HATGQIYAISKDLATYIS+N+
Sbjct: 272 KGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVNR 314 HSP 3 Score: 82.8037 bits (203), Expect = 4.447e-15 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 2908 LDCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAVW 3045
LDCEWK QAGN C ASFDWSCSGIC +V+ + VH +CGEGD A+W
Sbjct: 350 LDCEWKGQAGNPCAASFDWSCSGICKSVDRMLEVHQRCGEGDGAIW 395 HSP 4 Score: 75.8702 bits (185), Expect = 9.354e-13 Identity = 31/38 (81.58%), Postives = 36/38 (94.74%), Query Frame = 3
Query: 2457 VCRPILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGTP 2570
V R +LH+YANEDVSLG+WFIGL+VEHIDDRS+CCGTP
Sbjct: 312 VNRQLLHKYANEDVSLGSWFIGLDVEHIDDRSLCCGTP 349 HSP 5 Score: 63.1586 bits (152), Expect = 9.470e-9 Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 727 VRSLDNQISVFQKELAASRSPHEPGILNHSGSTLSSGLSPRDPYRKKVFIVIGINTAFSSRMRRDSVRATWMPQG 951
+++LD IS + ELA +R+ G ++ ++ + R ++F V+GI TAFSSR RRDS+R TW+P+G
Sbjct: 85 IKTLDKTISSLEVELATARAARSDG--RDGSPAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRRDSIRGTWLPKG 157
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GT5_ARATH (Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=B3GALT5 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 7.371e-42 Identity = 70/155 (45.16%), Postives = 83/155 (53.55%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQK 1868
S+T NS+LD+ ID E+AQ+ DF RL +HVEGY+ LSAKTK FFS+AVAKWDA+FYVK+DDDVHVNLG L + L H RSKPRVYIGCMKSGPVL++K
Sbjct: 174 SSTPNSMLDKEIDSEDAQYNDFFRL----------------------------DHVEGYYNLSAKTKSFFSSAVAKWDAEFYVKIDDDVHVNLG-----TLASTLASH---------------------------RSKPRVYIGCMKSGPVLTKK 268 HSP 2 Score: 80.1073 bits (196), Expect = 7.371e-42 Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 1960 RDVKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
+ KY EPEFWKFGE+GNKYF HATGQIYAISKDLATYIS NQ
Sbjct: 268 KTAKYREPEFWKFGEEGNKYFRHATGQIYAISKDLATYISNNQ 310 HSP 3 Score: 78.5666 bits (192), Expect = 1.178e-13 Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 3
Query: 2463 RPILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGTPP 2573
+PILH+YANEDV+LG+WFIGLEVE IDDR+ CCGTPP
Sbjct: 310 QPILHKYANEDVTLGSWFIGLEVEQIDDRNFCCGTPP 346 HSP 4 Score: 76.6406 bits (187), Expect = 4.671e-13 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 727 VRSLDNQISVFQKELAASRSPHEPGILNHSGSTLSSGLSPRDPYRKKVFIVIGINTAFSSRMRRDSVRATWMPQG 951
+ SLD +S+ QK+L+A+ SP + I+N S + S+ + KVF+VIGINTAFSSR RRDS+R TWMPQG
Sbjct: 85 IESLDKSVSMLQKQLSATHSPQQ--IVNVSATNSST----EGNQKNKVFMVIGINTAFSSRKRRDSLRETWMPQG 153 HSP 5 Score: 70.8626 bits (172), Expect = 3.409e-11 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 2911 DCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAVW 3045
DCE +A+AG +CVA+FDW CSG+C +V+ + VH CGEG +AVW
Sbjct: 347 DCEMRAEAGEMCVATFDWKCSGVCRSVDRMWMVHVMCGEGSKAVW 391
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GT8_ARATH (Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana OX=3702 GN=B3GALT8 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 8.770e-42 Identity = 63/155 (40.65%), Postives = 81/155 (52.26%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQK 1868
S T +LD+ ID E+++HKDFLRL +H+EGYH+LS KT+++FSTA A +DA+FYVKVDDDVHVNLGM ++ T + S+PR+YIGCMKSGPVLSQK
Sbjct: 172 SATPGGVLDKAIDEEDSEHKDFLRL----------------------------KHIEGYHQLSTKTRLYFSTATAMYDAEFYVKVDDDVHVNLGM----LVTTLARYQ----------------------------SRPRIYIGCMKSGPVLSQK 266 HSP 2 Score: 85.8853 bits (211), Expect = 8.770e-42 Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 1
Query: 1960 RDVKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
+ VKYHEPEFWKFGE+GNKYF HATGQIYAISKDLATYIS NQ
Sbjct: 266 KGVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISTNQ 308 HSP 3 Score: 76.2554 bits (186), Expect = 5.613e-13 Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 2911 DCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAVWSY 3051
DC+WKAQAGNVC ASFDWSCSGIC +V+ + VH C EGD + ++
Sbjct: 345 DCQWKAQAGNVCAASFDWSCSGICKSVDRMARVHRACAEGDTPLANF 391 HSP 4 Score: 75.485 bits (184), Expect = 1.117e-12 Identity = 31/35 (88.57%), Postives = 34/35 (97.14%), Query Frame = 3
Query: 2469 ILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGTPP 2573
ILHRYANEDVSLGAW +GLEVEH+D+RSMCCGTPP
Sbjct: 310 ILHRYANEDVSLGAWMLGLEVEHVDERSMCCGTPP 344 HSP 5 Score: 65.0846 bits (157), Expect = 2.316e-9 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 694 IIGVFPFFLGHVRSLDNQISVFQKELAASRSPHEPGILNHSGSTLSSGLSPRDPYR-KKVFIVIGINTAFSSRMRRDSVRATWMPQG 951
IIG V+SL+ +S + ELAA+R+ + S S S ++ R +KVF VIGINTAFSS+ RRDSVR TWMP G
Sbjct: 72 IIGEVSRTHQAVKSLERTMSTLEMELAAART-------SDRSSEFWSERSAKNQSRLQKVFAVIGINTAFSSKKRRDSVRQTWMPTG 151
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GT2_ARATH (Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=B3GALT2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.520e-40 Identity = 67/155 (43.23%), Postives = 76/155 (49.03%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQK 1868
S T+ ILD+ I+ E+ +H DFLRL +HVEGY ELS KTK +FSTA + WDADFYVKVDDDVHVN+ L LV H R KPRVYIGCMKSGPVLSQK
Sbjct: 186 SATTGGILDRAIEAEDRKHGDFLRL----------------------------DHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIA-----TLGETLVRH---------------------------RKKPRVYIGCMKSGPVLSQK 280 HSP 2 Score: 83.5741 bits (205), Expect = 1.520e-40 Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 1
Query: 1966 VKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
V+YHEPE+WKFGE GNKYF HATGQ+YAIS+DLA+YISINQ
Sbjct: 282 VRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISINQ 322 HSP 3 Score: 82.0333 bits (201), Expect = 8.754e-15 Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 1
Query: 2911 DCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAVWS 3048
DCEWKAQAGN+CVASFDWSCSGIC + + IK VH +CGEG++A+WS
Sbjct: 359 DCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWS 404 HSP 4 Score: 74.7146 bits (182), Expect = 1.857e-12 Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 727 VRSLDNQISVFQKELAASRSPHEPGILNHSGSTLSSGLSPRDPYRKKVFI-VIGINTAFSSRMRRDSVRATWMPQGK 954
+++LD IS + ELAA+RS E +G+ LS + + P ++ F+ V+GINTAFSSR RRDS+RATWMPQG+
Sbjct: 93 LQTLDKTISSLEMELAAARSVQES---LQNGAPLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGE 166 HSP 5 Score: 74.7146 bits (182), Expect = 2.121e-12 Identity = 28/35 (80.00%), Postives = 34/35 (97.14%), Query Frame = 3
Query: 2469 ILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGTPP 2573
+LH+YANEDVSLGAWFIG++V+HIDDR +CCGTPP
Sbjct: 324 VLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPP 358
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GT3_ARATH (Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=B3GALT3 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.861e-39 Identity = 66/155 (42.58%), Postives = 78/155 (50.32%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQK 1868
S T+ ILD++I+ E+ +H DFLRL +HVEGY ELS KTK +FSTAV+KWDA+FYVKVDDDVHVN+ L LV H R K RVY+GCMKSGPVLSQK
Sbjct: 188 SATAGGILDRSIEAEDKKHGDFLRL----------------------------DHVEGYLELSGKTKTYFSTAVSKWDAEFYVKVDDDVHVNIA-----TLGETLVRH---------------------------RKKHRVYLGCMKSGPVLSQK 282 HSP 2 Score: 82.4185 bits (202), Expect = 1.861e-39 Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 1
Query: 1966 VKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
V+YHEPE+WKFGE GNKYF HATGQ+YAIS+DLA+YIS+NQ
Sbjct: 284 VRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISLNQ 324 HSP 3 Score: 77.411 bits (189), Expect = 3.288e-13 Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 1
Query: 2911 DCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAVW 3045
DCEWKAQAGN+CVASFDW+CSGIC + + IK VH +CGE + A+W
Sbjct: 361 DCEWKAQAGNICVASFDWTCSGICRSADRIKEVHKRCGEPENAIW 405 HSP 4 Score: 73.559 bits (179), Expect = 5.359e-12 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 3
Query: 2469 ILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGTPP 2573
+LH+YANEDV+LGAWFIGL+V HIDDR +CCGTPP
Sbjct: 326 VLHKYANEDVTLGAWFIGLDVTHIDDRRLCCGTPP 360 HSP 5 Score: 71.2478 bits (173), Expect = 2.960e-11 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 727 VRSLDNQISVFQKELAASRSPHEPGILNHSGSTLSSGLSPRD-PYRKKVFIVIGINTAFSSRMRRDSVRATWMPQG 951
+++LD IS + ELAA+RS E + +G+ +S+ + + P +++ +V+GINTAFSSR RRDSVR TWMP G
Sbjct: 95 IQTLDKTISSLEMELAAARSAQESLV---NGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRKRRDSVRTTWMPSG 167
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GT4_ARATH (Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=B3GALT4 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.547e-39 Identity = 65/155 (41.94%), Postives = 76/155 (49.03%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQK 1868
S+T ILD+ I EE++H DFLRL +HVEGY ELSAKTK +F+TA A WDADFYVKVDDDVHVN+ L L + + KPRVYIGCMKSGPVL+QK
Sbjct: 187 SSTPGGILDRAIQAEESKHGDFLRL----------------------------DHVEGYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNIA-----TLGAELARYRM---------------------------KPRVYIGCMKSGPVLAQK 281 HSP 2 Score: 80.1073 bits (196), Expect = 3.547e-39 Identity = 33/41 (80.49%), Postives = 40/41 (97.56%), Query Frame = 1
Query: 1966 VKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
V+YHEPE+WKFGE+GNKYF HATGQ+YAIS++LA+YISINQ
Sbjct: 283 VRYHEPEYWKFGEEGNKYFRHATGQLYAISRELASYISINQ 323 HSP 3 Score: 81.6481 bits (200), Expect = 1.322e-14 Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 1
Query: 2911 DCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAV 3042
DCEWKAQAGN+CVASFDWSCSGIC + + +K VH +CGEG++A+
Sbjct: 359 DCEWKAQAGNICVASFDWSCSGICRSADRMKDVHRRCGEGEKAL 402 HSP 4 Score: 69.707 bits (169), Expect = 8.533e-11 Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 727 VRSLDNQISVFQKELAASRSPHEPGILNHSGSTLSSGLS-PRDPYRKKVFIVIGINTAFSSRMRRDSVRATWMPQG 951
+++LD IS + ELA +R+ E I+N GS +S P ++K +V+G+NTAFSSR RRDSVRATWMP G
Sbjct: 94 IQTLDKTISKLETELADARAAQE-SIMN--GSPVSDDFKLPETVTKRKYLMVVGVNTAFSSRKRRDSVRATWMPPG 166 HSP 5 Score: 65.4698 bits (158), Expect = 2.108e-9 Identity = 24/33 (72.73%), Postives = 31/33 (93.94%), Query Frame = 3
Query: 2469 ILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGT 2567
+LH+Y NEDVSLG+WF+GL+VEH+DDR +CCGT
Sbjct: 325 VLHKYVNEDVSLGSWFLGLDVEHVDDRRLCCGT 357
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GT1_ARATH (Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=B3GALT1 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 4.100e-38 Identity = 63/155 (40.65%), Postives = 75/155 (48.39%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQK 1868
S S+ ILD+ I+ EE H DFLRL EH EGY +LSAKTK FF+TAV+ WDA+FY+KVDDDVHVNL L L H +KPRVY+GCMKSGPVL++K
Sbjct: 163 SVLSHGILDKAIEAEEKTHGDFLRL----------------------------EHTEGYMKLSAKTKTFFATAVSLWDAEFYIKVDDDVHVNLAS-----LKKALSAHQ---------------------------NKPRVYVGCMKSGPVLARK 257 HSP 2 Score: 82.0333 bits (201), Expect = 4.100e-38 Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 1960 RDVKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
+ VKYHEPE+WKFGE GNKYF HATGQ YAISKDLATYI INQ
Sbjct: 257 KSVKYHEPEYWKFGEVGNKYFRHATGQFYAISKDLATYILINQ 299 HSP 3 Score: 66.2402 bits (160), Expect = 1.051e-9 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 2911 DCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAVWS 3048
DCE KA G+VC ASFDW CSGIC + E + VH +CGE A+W+
Sbjct: 336 DCELKAMMGHVCAASFDWKCSGICRSAERMADVHERCGEPQNALWT 381 HSP 4 Score: 63.929 bits (154), Expect = 5.346e-9 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 736 LDNQISVFQKELAASRSPHEPGILNHSGSTLSSGLS-PRDPYRKKVFIVIGINTAFSSRMRRDSVRATWMPQGKTV 960
LD IS + +L A+R+ E +LS + + ++K F+VIGINTAFSSR RRDSVR+TWMPQG+ +
Sbjct: 79 LDKSISNLEMKLVAARAERE---------SLSGKFNISNEAKKRKYFMVIGINTAFSSRKRRDSVRSTWMPQGENL 145 HSP 5 Score: 61.6178 bits (148), Expect = 2.878e-8 Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 3
Query: 2469 ILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGT 2567
+LH+YANEDVSLG+WFIGL VEH+D++ +CC T
Sbjct: 301 LLHKYANEDVSLGSWFIGLNVEHVDEKRLCCST 333
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GTA_ARATH (Hydroxyproline O-galactosyltransferase HPGT2 OS=Arabidopsis thaliana OX=3702 GN=HPGT2 PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.046e-15 Identity = 50/156 (32.05%), Postives = 62/156 (39.74%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL-GMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQK 1868
S LD+ ID E KDFL IL H E EL K K F+S AV WDA+FYVKVDD+V ++L GM I L S+ RS+ YIGCMKSG V++++
Sbjct: 165 SANRGDSLDRKIDEENRATKDFL---------------------------ILENHEEAQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEGM--------------IALLESR-------------------RSQDGAYIGCMKSGDVITEE 260 HSP 2 Score: 47.7506 bits (112), Expect = 1.046e-15 Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 1969 KYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISIN 2085
+++EPE+WKFG+ YF HATG + +SK+LA Y++IN
Sbjct: 263 QWYEPEWWKFGDD-KSYFRHATGSLVILSKNLAQYVNIN 300
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Match: B3GTB_ARATH (Hydroxyproline O-galactosyltransferase HPGT1 OS=Arabidopsis thaliana OX=3702 GN=HPTG1 PE=1 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 8.034e-15 Identity = 44/154 (28.57%), Postives = 58/154 (37.66%), Query Frame = 3
Query: 1404 STTSNSILDQTIDLEEAQHKDFLRLVIYHNN*LCGKKLDNLAGI*HCFFNIL*EHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMCYLRILNTFLVFHAIFFLTSKVYSNNCFXXXXXXXXXXXXXSKPRVYIGCMKSGPVLSQ 1865
S +D++ID E +Q DF+ IL + VE E S K K+FF+ A +WDA FY K D+++VN+ L T L H PR YIGCMKSG V S+
Sbjct: 158 SANKGDSMDKSIDTENSQTDDFI---------------------------ILDDVVEAPEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDA-----LGTTLAAH---------------------------LENPRAYIGCMKSGEVFSE 252 HSP 2 Score: 46.595 bits (109), Expect = 8.034e-15 Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 1969 KYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQ 2088
K++EPE+WKFG++ YF HA G++Y I+ LA ++SIN+
Sbjct: 256 KWYEPEWWKFGDK-KAYFRHAYGEMYVITHALARFVSINR 294 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01649 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01649_La_Tanjil_v1.0 ID=rna-TanjilR_01649_La_Tanjil_v1.0; Name=rna-TanjilR_01649; organism=Lupinus angustifolius; type=mRNA; length=4499bpback to top protein sequence of rna-TanjilR_01649_La_Tanjil_v1.0 >rna-TanjilR_01649_La_Tanjil_v1.0 ID=rna-TanjilR_01649_La_Tanjil_v1.0; Name=rna-TanjilR_01649_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=471bpback to top mRNA from alignment at Chr_LG09-CM007369.1:18394485..18398983- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01649_La_Tanjil_v1.0 ID=rna-TanjilR_01649_La_Tanjil_v1.0; Name=rna-TanjilR_01649; organism=Lupinus angustifolius; type=mRNA; length=4499bp; location=Sequence derived from: Chr_LG09-CM007369.1:18394485..18398983- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:18394485..18398983- >rna-TanjilR_01649_La_Tanjil_v1.0 ID=rna-TanjilR_01649_La_Tanjil_v1.0; Name=rna-TanjilR_01649; organism=Lupinus angustifolius; type=CDS; length=1416bp; location=Sequence derived from: Chr_LG09-CM007369.1:18394485..18398983- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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