rna-TanjilR_06542

Transcript Overview
Namerna-TanjilR_06542
Unique Namerna-TanjilR_06542_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length707
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG13-CM007373.1supercontigChr_LG13-CM007373.1:3526105..3526811 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananR246Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR250Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaR0263Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0268Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0339Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0340Cajanus cajan Asha genome v1.0Cajanus cajan
anpsR0255Pisum sativum Cameor genome v1aPisum sativum
anpvR0320Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0322Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0331Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0258Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0274Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0290Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0290Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0298Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0305Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0343Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0350Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0281Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0298Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0261Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0262Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0301Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0303Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0277Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0242Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0289Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0304Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0258Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0319Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0321Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancarR0264Cicer arietinum
ancarR0295Cicer arietinum
anccaR0238Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0256Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0284Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0322Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0324Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0340Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0284Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0301Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0311Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0292Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0289Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0317Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0319Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0316Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0318Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0335Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0334Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR0243Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0320Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0326Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0331Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0262Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0339Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigun11g104900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_014638768.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_06G00881.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg5701.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
PvulFLAVERTChr11.1000760Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058877135.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Hedin2.R1.6g006560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan08g107200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.06G133800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.model.Chr11.1024Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.011G117200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun11g104900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.06G131300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Tiffany.R1.6g004680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_06542gene-TanjilG_06542_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06542rna-TanjilR_06542_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_06542_La_Tanjil_v1.0rna-TanjilR_06542_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06542_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3526568..3526811rna-TanjilR_06542_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3526568..3526811Lupinus angustifoliusCDS
rna-TanjilR_06542_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3526105..3526337rna-TanjilR_06542_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3526105..3526337Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06542_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3526568..3526811rna-TanjilR_06542_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3526568..3526811Lupinus angustifoliusexon
rna-TanjilR_06542_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3526105..3526337rna-TanjilR_06542_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3526105..3526337Lupinus angustifoliusexon


Homology
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06542 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.630.30coord: 16..155
e-value: 1.1E-32
score: 115.0
NoneNo IPR availableCDDcd04301NAT_SFcoord: 52..114
e-value: 4.20403E-12
score: 56.13
IPR000182GNAT domainPFAMPF00583Acetyltransf_1coord: 22..131
e-value: 2.8E-18
score: 66.3
IPR000182GNAT domainPROSITEPS51186GNATcoord: 4..155
score: 22.014
IPR016181Acyl-CoA N-acyltransferaseSUPERFAMILY55729Acyl-CoA N-acyltransferases (Nat)coord: 20..154

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_06542_La_Tanjil_v1.0 ID=rna-TanjilR_06542_La_Tanjil_v1.0; Name=rna-TanjilR_06542; organism=Lupinus angustifolius; type=mRNA; length=707bp
ATGGCGAGTGTGGCGATAGTTGAGCTTCACAGAAACTCAGGAAATTGTAT
TAAGACAGTGGAAGAGATTGTGAAATTGGAGAGAAAGATATTTCCCAAAC
ACGAATCACTCGCTACCTTCTTTGATGATGAACTAAGAAAGAAGAACACT
GGATTGCTTTGTCTCCACGTTGATGGAGAACTTGCAGGCTATGCAATGTA
TTCTTGGCCTTCTTCATTGTTCGCTTCTATCACCAAACTCGCAGGTTCCA
ATCACCCACTTCATTTCTTTAGTACTTTTTAGTATCCTTGTAAATATAAG
CCATGCCCATAAACTGTTTGATGAAATTACCCAATGAAAAAAGATTGAAA
TTTGTTTGTTTGGTCTTCTGGGTGGTCCTTATTACTTATAATTAGTGATT
TTTTTGTATTGAAGCTTCAATATTTTGGTTTTTGACAAGATGGGTATTCT
TCCATATTCTTTTGGTTTAAATAGTGAAGGAGCAATGGAGGGGGAAAGGG
CATGGAGAAGCTCTGCTGAAAGCAGCAATAGAGAAATGCAGGACAAGGAA
AGTTTCACGCATAATGCTTCACGTGGATCCTATGAGGACACCTGCACTCA
ATCTTTATAAGAAACATGGTTTCCAAGTTGACTGCTTGATTGAAAGATAC
TACTCTTCAGATCGAAATGCTTATAGAATGTACTTGGACTTTGATGAATC
CAAGTGA
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protein sequence of rna-TanjilR_06542_La_Tanjil_v1.0

>rna-TanjilR_06542_La_Tanjil_v1.0 ID=rna-TanjilR_06542_La_Tanjil_v1.0; Name=rna-TanjilR_06542_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=158bp
MASVAIVELHRNSGNCIKTVEEIVKLERKIFPKHESLATFFDDELRKKNT
GLLCLHVDGELAGYAMYSWPSSLFASITKLAVKEQWRGKGHGEALLKAAI
EKCRTRKVSRIMLHVDPMRTPALNLYKKHGFQVDCLIERYYSSDRNAYRM
YLDFDESK
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mRNA from alignment at Chr_LG13-CM007373.1:3526105..3526811-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_06542_La_Tanjil_v1.0 ID=rna-TanjilR_06542_La_Tanjil_v1.0; Name=rna-TanjilR_06542; organism=Lupinus angustifolius; type=mRNA; length=707bp; location=Sequence derived from: Chr_LG13-CM007373.1:3526105..3526811- (Lupinus angustifolius
ATGGCGAGTGTGGCGATAGTTGAGCTTCACAGAAACTCAGGAAATTGTAT
TAAGACAGTGGAAGAGATTGTGAAATTGGAGAGAAAGATATTTCCCAAAC
ACGAATCACTCGCTACCTTCTTTGATGATGAACTAAGAAAGAAGAACACT
GGATTGCTTTGTCTCCACGTTGATGGAGAACTTGCAGGCTATGCAATGTA
TTCTTGGCCTTCTTCATTGTTCGCTTCTATCACCAAACTCGCAGGTTCCA
ATCACCCACTTCATTTCTTTAGTACTTTTTAGTATCCTTGTAAATATAAG
CCATGCCCATAAACTGTTTGATGAAATTACCCAATGAAAAAAGATTGAAA
TTTGTTTGTTTGGTCTTCTGGGTGGTCCTTATTACTTATAATTAGTGATT
TTTTTGTATTGAAGCTTCAATATTTTGGTTTTTGACAAGATGGGTATTCT
TCCATATTCTTTTGGTTTAAATAGTGAAGGAGCAATGGAGGGGGAAAGGG
CATGGAGAAGCTCTGCTGAAAGCAGCAATAGAGAAATGCAGGACAAGGAA
AGTTTCACGCATAATGCTTCACGTGGATCCTATGAGGACACCTGCACTCA
ATCTTTATAAGAAACATGGTTTCCAAGTTGACTGCTTGATTGAAAGATAC
TACTCTTCAGATCGAAATGCTTATAGAATGTACTTGGACTTTGATGAATC
CAAGTGA
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Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3526105..3526811-

>rna-TanjilR_06542_La_Tanjil_v1.0 ID=rna-TanjilR_06542_La_Tanjil_v1.0; Name=rna-TanjilR_06542; organism=Lupinus angustifolius; type=CDS; length=477bp; location=Sequence derived from: Chr_LG13-CM007373.1:3526105..3526811- (Lupinus angustifolius
ATGGCGAGTGTGGCGATAGTTGAGCTTCACAGAAACTCAGGAAATTGTAT
TAAGACAGTGGAAGAGATTGTGAAATTGGAGAGAAAGATATTTCCCAAAC
ACGAATCACTCGCTACCTTCTTTGATGATGAACTAAGAAAGAAGAACACT
GGATTGCTTTGTCTCCACGTTGATGGAGAACTTGCAGGCTATGCAATGTA
TTCTTGGCCTTCTTCATTGTTCGCTTCTATCACCAAACTCGCAGTGAAGG
AGCAATGGAGGGGGAAAGGGCATGGAGAAGCTCTGCTGAAAGCAGCAATA
GAGAAATGCAGGACAAGGAAAGTTTCACGCATAATGCTTCACGTGGATCC
TATGAGGACACCTGCACTCAATCTTTATAAGAAACATGGTTTCCAAGTTG
ACTGCTTGATTGAAAGATACTACTCTTCAGATCGAAATGCTTATAGAATG
TACTTGGACTTTGATGAATCCAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000182GNAT_dom
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0008080N-acetyltransferase activity