rna-TanjilR_06538
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana OX=3702 GN=PLT4 PE=2 SV=1) HSP 1 Score: 618.616 bits (1594), Expect = 0.000e+0 Identity = 331/462 (71.65%), Postives = 386/462 (83.55%), Query Frame = 2 Query: 779 SLHDLFCEFADVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQAVGLAN-YEEQPVWRELLYPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFFGQGPIVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIEIMFQNEHQSQRRETELGDVEQLVHNK 2161 SL+++ + DVGVMSGAV+FI++DLKI EVQ E LIG LSI+SL GSL GGRTSD IGRKWTMALAA+VFQ GA M +APS+ VLMIGR +AG+GIG GVMI+P+YIAEISP V+RG T+FPEIFIN+GILLGYVSNYAFSG S HISWRIMLAVGILPS FIGFAL VIPESPRWLVM+ R+D AR VL+KTNE + EAEERLAEIQ A E++PVWRELL PSP +R+MLI G GIQCFQQI+GIDA+VYYSPEI AGI++++K L ATVAVG+TKT+FIL A LID +GRKPLL +STIGMT+CLF + LTF GQG + I L++LFVCGNVAFFS+G+GPVCWVLTSEIFPLR+RAQASALGAVGNRVCSG+VAMSFLSV+R IT GG FF+FS VSAL+++FVY LVPET GKSLEQIE+MFQ + + E ELGD E+LV + Sbjct: 63 SLNNVLLGY-DVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRIMLAVGILPSVFIGFALCVIPESPRWLVMKGRVDSAREVLMKTNERDDEAEERLAEIQLAAAHTEGSEDRPVWRELLSPSPVVRKMLIVGFGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGMTLCLFCLSFTLTFLGQGTLGITLALLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTFFVFSLVSALSVIFVYVLVPETSGKSLEQIELMFQGGLERKDGEVELGDAERLVRKE 523 HSP 2 Score: 60.4622 bits (145), Expect = 3.226e-8 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 7 IQENGNGELGLSGIPLGT----KNKYKRMNSELHEDNDDILQAQEDKRNS-TWKYVLACAIFASLNNVLLGYGMLSLKKSQIF 240 + E GNG G SG P + KNKY+RM+S+ E + + + RNS T KYV+ACA FASLNNVLLGY + + + +F Sbjct: 5 LPEVGNG--GGSGFPAVSVGNKKNKYQRMDSDAEESQN---HREAEARNSRTRKYVMACAFFASLNNVLLGYDVGVMSGAVLF 82
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana OX=3702 GN=PLT5 PE=1 SV=2) HSP 1 Score: 417.542 bits (1072), Expect = 5.174e-137 Identity = 226/468 (48.29%), Postives = 316/468 (67.52%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQAVGLA-------------NYEEQPVWRELL-YPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFFGQGPI----VIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIEIMFQNEHQSQRRETELGDVEQLVHN 2158 D+GVMSGA+I+IK DLKIN++Q+ L G L+I SL+GS GRTSD IGR++T+ LA +F AGA+ M L+P+Y LM GR +AG+G+G+ +MI+P+Y AE+SP SRG L +FPE+FIN GI+LGYVSN AFS + WR+ML +G +PS + + +PESPRWLVMQ R+ +A+ VL KT++ EA RL +I+ A G+ N + VWRELL P+PA+RR++I IGI FQQ SGIDA V +SP IF AG++ + L+ATVAVG+ KT FILVA L+D++GR+PLLL S GM + L ++G LT Q + ++I V VA FS+G GP+ WV +SEIFPLR+R+Q S++G V NRV SG++++SFL +++ +T GGAF+LF G++ +A VF YT +PET+G+ LE ++ +F + G+ E+ V N Sbjct: 53 DIGVMSGAMIYIKRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSNLPLKVGWRLMLGIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVLDKTSDSPTEATLRLEDIKHAAGIPADCHDDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYTFLPETQGRMLEDMDELFSGFRWRDSKSKPKGNPEKTVPN 520
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=3 SV=1) HSP 1 Score: 400.979 bits (1029), Expect = 4.334e-131 Identity = 225/464 (48.49%), Postives = 319/464 (68.75%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQAVGLAN-------------YEEQPVWRELL-YPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFFGQGP-----IVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIEIMFQNEHQSQRRETELGDVE 2143 D+GVMSGA IFIK+DLK+++VQ+E L+GIL+I SL+GS GRTSD +GR++T+ LA F GAL M A +Y +M+GR VAG+G+G+ +MI+P+Y AE++P SRG LT+FPEIFIN+GILLGYVSNY FS H+ WR ML VG +PS F+ + +PESPRWLV+Q R+ +A VL KT+ ++EA RL +I++AVG+ + + VW++LL P+P++R +LI +GI QQ SGIDA V YSP IF AG+++K+ L+ATVAVG+ KT+FI+V ++D+ GR+ LLL S GM + L ++G LT + P I L++ V VA FS+G GPV WV SEIFP+R+RAQ ++LG + NR+ SGI+ M+FLS+++ +T GGAF LF+GV+A A VF +T +PET+G LE++E +F + +++ + D E Sbjct: 43 DIGVMSGASIFIKDDLKLSDVQLEILMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPSVFLAIGVLAMPESPRWLVLQGRLGDAFKVLDKTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFTFLPETRGIPLEEMETLFGSYTANKKNNSMSKDNE 506
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=3 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 8.970e-130 Identity = 225/470 (47.87%), Postives = 319/470 (67.87%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQAVGLAN-------------YEEQPVWRELL-YPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFFGQGP-----IVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIEIMFQNEHQSQRRETELGDVEQLVHNK 2161 D+GVMSGA IFIK+DLK+++VQ+E L+GIL+I SL+GS GRTSD IGR++T+ LA F GAL M A +Y +M+GR VAG+G+G+ +MI+P+Y E++P SRG L++FPEIFIN+GILLGYVSNY F+ HI WR ML +G +PS F+ + +PESPRWLVMQ R+ +A VL KT+ ++EA RL +I++AVG+ + + VW++LL P+P++R +LI +GI QQ SGIDA V YSP IF AG+++K+ L+ATVAVG+ KT+FI+V L+D+ GR+ LLL S GM L ++G LT + P I L++ V VA FS+G GPV WV SEIFP+R+RAQ ++LG + NR+ SGI+ M+FLS+++ +T GGAF LF+GV+ A VF +T +PET+G LE+IE +F + + ++ + +Q+V + Sbjct: 43 DIGVMSGAAIFIKDDLKLSDVQLEILMGILNIYSLIGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPASSRGFLSSFPEIFINIGILLGYVSNYFFAKLPEHIGWRFMLGIGAVPSVFLAIGVLAMPESPRWLVMQGRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAVAAWVFFFTFLPETRGVPLEEIESLF-GSYSANKKNNVMSKGKQVVDEQ 511
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana OX=3702 GN=PLT6 PE=2 SV=2) HSP 1 Score: 388.267 bits (996), Expect = 2.401e-126 Identity = 217/457 (47.48%), Postives = 303/457 (66.30%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQAVGL-------------ANYEEQPVWREL-LYPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFF----GQGPIVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIEIMFQNEHQSQRRET 2125 D GVMSGA++FI+EDLK N+VQ+E L GIL++ +L+GSL GRTSDIIGR++T+ LA+++F G++ M P+Y VL+ GR AG+G+GF +M++P+Y AEI+ RG L + P + I++GILLGY+ NY FS HI WR+ML + +PS + F + +PESPRWL+MQ R+ E + +L + +EAE R +I+ A G+ + VW+EL L P+PA+RR+L+T +GI FQ SGI+A + Y P IF AGI K K + T+ VGI KT FI A +L+DK+GR+ LLL S GM + L +G LT G+ + LSI+ VAFFS+GLGP+ WV +SE+FPL++RAQ ++LG NRV + V+MSFLS+T IT GGAFF+F+GV+A+A F + L+PETKGKSLE+IE +FQ + R E Sbjct: 34 DTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLASLPHLCISIGILLGYIVNYFFSKLPMHIGWRLMLGIAAVPSLVLAFGILKMPESPRWLIMQGRLKEGKEILELVSNSPEEAELRFQDIKAAAGIDPKCVDDVVKMEGKKTHGEGVWKELILRPTPAVRRVLLTALGIHFFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFFFLLPETKGKSLEEIEALFQRDGDKVRGEN 490
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana OX=3702 GN=PLT3 PE=3 SV=1) HSP 1 Score: 384.03 bits (985), Expect = 1.613e-124 Identity = 219/445 (49.21%), Postives = 309/445 (69.44%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQA--VGLANYEE-----------QPVWREL-LYPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTF---FGQGPIVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIEIMF 2092 D GVMSGA IFI++DLKIN+ Q+E L GIL++ +L+GSL G+TSD+IGR++T+AL+AV+F G++ M P+Y VLM+GR +AGVG+GF +MI+P+Y AEIS RG LT+ PE+ I++GILLGYVSNY F + + WR+ML + PS + F + +PESPRWLVMQ R++EA+ +++ + E+EAEER +I A V + +E + VWREL + P PA+R +LI +GI F+ +GI+A V YSP IF AG+ +K K L+ATV VG+TK FI++A L+DK+GR+ LLL ST GM L S+ V LT FG+ ++LSI+ VAFFS+GLGP+ WV +SEIFPLR+RAQ +++G NR+ + V+MSFLS+T+ IT GG FF+F+G++ A F + ++PETKG LE++E +F Sbjct: 39 DTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSASHRGFLTSLPELCISLGILLGYVSNYCFGKLTLKLGWRLMLGIAAFPSLILAFGITRMPESPRWLVMQGRLEEAKKIMVLVSNTEEEAEERFRDILTAAEVDVTEIKEVGGGVKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRFGRLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFAGIAVAAWWFFFFMLPETKGLPLEEMEKLF 483
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: XYLT_LACBR (D-xylose transporter OS=Lactobacillus brevis OX=1580 GN=xylT PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.267e-64 Identity = 140/439 (31.89%), Postives = 247/439 (56.26%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXX-XXIQQAVGLANYEEQPVWRELLYPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFFGQGPIVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIEIMFQNEHQSQRRE 2122 D GV+SGA++FI++ + + Q +++ + + ++LG+ G +SD GR+ + L+A++F GAL +P + L+I RI+ G+ +G + P Y+AE++P+ RG++++ ++ + GILL Y++NY+FSGF + WR ML +P+A + ++PESPR+LV +DEAR VL N+ ++ A + +IQ++ + + ++ +++ PS LI GIG+ FQQ+ G + +YY+P IF G S L+A + +GI I +A+ ++DK+ RK ++ I +GM + LF + + + F G +S++ + +AFFS GPV WV+ E+FPL +R ++ +V N + IV+++F S+ G F + + +I FV V ET+ +SLE IE + + E Sbjct: 23 DTGVISGAILFIQKQMNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILLAYITNYSFSGF--YTGWRWMLGFAAIPAALLFLGGLILPESPRFLVKSGHLDEARHVLDTMNKHDQVAVNKEINDIQESAKIVSGGWSELFGKMVRPS------LIIGIGLAIFQQVMGCNTVLYYAPTIFTDVGF-GVSAALLAHIGIGIFNVIVTAIAVAIMDKIDRKKIVNIGAVGMGISLFVMSIGMKFSGGSQTAAIISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTFPSLLDFFGTGSLFIGYGILCFASIWFVQKKVFETRNRSLEDIEATLRAKTGEDAAE 452
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: YWTG_BACSU (Putative metabolite transport protein YwtG OS=Bacillus subtilis (strain 168) OX=224308 GN=ywtG PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.556e-64 Identity = 140/432 (32.41%), Postives = 239/432 (55.32%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQAVGLANYEEQPVWRELLYPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFFGQGPIVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIEIMFQNEH 2104 D GV+SGA++F+K++L +N ++ L + ++LGS G+ +D GRK + AA++F G L + LAP+ V+++ RI+ G+ +G I P+Y++E++P RG+L++ ++ I VGILL Y+ NY F+ A WR ML + +PS + + +PESPRWL +A+ +L K + +E + A +++ +EL P +R LI G+G+ QQ G + +YY+P+ F G N S ++ TV +G + LVA+ +IDK+GRKPLLL GM + L + ++ FF P +++ + + F+V GPV WV+ E+FPL VR + + + V + IV++++ + I F +++ + +A +FV V ETKG+SLE+IE ++++ Sbjct: 23 DTGVISGAILFMKKELGLNAFTEGLVVSSLLVGAILGSGAAGKLTDRFGRKKAIMAAALLFCIGGLGVALAPNTGVMVLFRIILGLAVGTSTTIVPLYLSELAPKHKRGALSSLNQLMITVGILLSYIVNYIFADAEA---WRWMLGLAAVPSLLLLIGILFMPESPRWLFTNGEESKAKKILEKLRGTKDIDQEI-----HDIKEAEKQDEGGLKELF--DPWVRPALIAGLGLAFLQQFIGTNTIIYYAPKTFTNVGFGN-SASILGTVGIGTVNVLMTLVAIKIIDKIGRKPLLLFGNAGMVISLIVLALVNLFFDNTPAASWTTVICLGVFIVVFAVSWGPVVWVMLPELFPLHVRGIGTGVSTLMLHVGTLIVSLTYPILMEAIGISYLFLIYAAIGIMAFLFVRFKVTETKGRSLEEIEQDLRDKN 443
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: CSBC_BACSU (Probable metabolite transport protein CsbC OS=Bacillus subtilis (strain 168) OX=224308 GN=csbC PE=1 SV=3) HSP 1 Score: 211.846 bits (538), Expect = 9.735e-60 Identity = 133/425 (31.29%), Postives = 232/425 (54.59%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQAVGLANYEEQPVWRELLYPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFFGQGPIVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIE 2083 D GV+SGA++FI D+ + + ++ +L + ++ GS G SD GR+ + + +++F GAL + + +L+ R++ G+ +G + P+Y++E++P RG+L T + I GILL Y+ NY F+ F A WR M+ + +P+ + + +PESPRWLV + +EAR ++ N + + + G A +E + + + +R ML+ G+G+ FQQ GI+ +YY+P IF AG+ + L T+ +GI I + A+ILID++GRK LL+ ++G+T+ L ++ +L G ++++F+ + F+ GPV WVL E+FP + R A+ + + IV++ F + + F +FS + L+ F + +VPETKGKSLE+IE Sbjct: 24 DTGVISGALLFINNDIPLTTLTEGLVVSMLLLGAIFGSALSGTCSDRWGRRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVPVYLSEMAPTKIRGTLGTMNNLMIVTGILLAYIVNYLFTPFEA---WRWMVGLAAVPAVLLLIGIAFMPESPRWLVKRGSEEEARRIM---NITHDPKDIEMELAEMKQGEAEKKETTLG---VLKAKWIRPMLLIGVGLAIFQQAVGINTVIYYAPTIFTKAGLGTSASAL-GTMGIGILNVIMCITAMILIDRVGRKKLLIWGSVGITLSLAALSGVLLTLGLSASTAWMTVVFLGVYIVFYQATWGPVVWVLMPELFPSKARGAATGFTTLVLSAANLIVSLVFPLMLSAMGIAWVFMVFSVICLLSFFFAFYMVPETKGKSLEEIE 438
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) OX=83333 GN=galP PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 5.735e-58 Identity = 139/429 (32.40%), Postives = 243/429 (56.64%), Query Frame = 2 Query: 809 DVGVMSGAVIFIKEDLKINEVQVEFXXXXXXXXXXXXXXXXXRTSDIIGRKWTMALAAVVFQAGALTMTLAPSYVVLMIGRIVAGVGIGFGVMISPIYIAEISPNVSRGSLTTFPEIFINVGILLGYVSNYAFSGFSAHISWRIMLAVGILPSAFIGFALFVIPESPRWLVMQNRIDEARAVLLKTNXXXXXXXXXXXXIQQAVGLANYEEQPVWRELLYPSPALRRMLITGIGIQCFQQISGIDASVYYSPEIFIAAGIENKSKGLVATVAVGITKTIFILVALILIDKLGRKPLLLISTIGMTVCLFSIGVILTFFGQGP----IVIALSILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVGNRVCSGIVAMSFLSVTRTITFGGAFFLFSGVSALAIVFVYTLVPETKGKSLEQIE 2083 D+GV++GA+ FI ++ +I E+++ + + +G++G G S +GRK ++ + A++F AG+L AP+ VL++ R++ G+ +G +P+Y++EI+P RGS+ + ++ I +GIL Y+S+ AFS A WR ML V I+P+ + +F +P+SPRW + R +A VLL+ + EA+ L EI++++ + +Q W L + RR + G+ +Q QQ +G++ +YY+P+IF AG N ++ + TV VG+T + +A+ L+D+ GRKP L + + M + +G ++ P IA+ ++F+ G F++ GP+ WVL SEI PL+ R N + + IV +FL++ T+ F++++ ++ L I+ LVPETK SLE IE Sbjct: 32 DIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGA---WRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLQV----KQSGW-ALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAMLLMFIVG----FAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIE 448 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06538 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_06538_La_Tanjil_v1.0 ID=rna-TanjilR_06538_La_Tanjil_v1.0; Name=rna-TanjilR_06538; organism=Lupinus angustifolius; type=mRNA; length=2179bpback to top protein sequence of rna-TanjilR_06538_La_Tanjil_v1.0 >rna-TanjilR_06538_La_Tanjil_v1.0 ID=rna-TanjilR_06538_La_Tanjil_v1.0; Name=rna-TanjilR_06538_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=525bpback to top mRNA from alignment at Chr_LG13-CM007373.1:3539754..3541932- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_06538_La_Tanjil_v1.0 ID=rna-TanjilR_06538_La_Tanjil_v1.0; Name=rna-TanjilR_06538; organism=Lupinus angustifolius; type=mRNA; length=2179bp; location=Sequence derived from: Chr_LG13-CM007373.1:3539754..3541932- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3539754..3541932- >rna-TanjilR_06538_La_Tanjil_v1.0 ID=rna-TanjilR_06538_La_Tanjil_v1.0; Name=rna-TanjilR_06538; organism=Lupinus angustifolius; type=CDS; length=1578bp; location=Sequence derived from: Chr_LG13-CM007373.1:3539754..3541932- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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