rna-TanjilR_19698

Transcript Overview
Namerna-TanjilR_19698
Unique Namerna-TanjilR_19698_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1623
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG13-CM007373.1supercontigChr_LG13-CM007373.1:3873965..3875587 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL074Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR238Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR246Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR250Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0309Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0311Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0263Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0306Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0335Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0330Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0342Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0255Pisum sativum Cameor genome v1aPisum sativum
anpsR0270Pisum sativum Cameor genome v1aPisum sativum
anpvR0322Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0331Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0258Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0274Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0292Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0343Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0281Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0295Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0261Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0262Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0301Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0308Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0303Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0310Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0277Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0295Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0242Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0289Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0308Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0258Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ancanR0237Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0269Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0283Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0324Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0264Cicer arietinum
ancarR0295Cicer arietinum
anccaR0238Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0256Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0324Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0340Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0301Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0319Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0318Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0335Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0334Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR0243Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0320Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0331Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0262Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr11.1000645Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.model.Chr11.1157Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va08G056800.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_004506213.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vum_06G01005.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.011G102100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_030062Cajanus cajan Asha genome v1.0Cajanus cajan
jg7400.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.6g014120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat07G0546100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan08g128300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun11g118900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun11g118900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
XM_058877280.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat7g203400.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.6g010480.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigan.06G153700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014637955.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_03114Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_19698gene-TanjilG_19698_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_19698rna-TanjilR_19698_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_19698_La_Tanjil_v1.0rna-TanjilR_19698_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_19698_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3873965..3874831rna-TanjilR_19698_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3873965..3874831Lupinus angustifoliusexon
rna-TanjilR_19698_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3875315..3875587rna-TanjilR_19698_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3875315..3875587Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_19698_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3873965..3874831rna-TanjilR_19698_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3873965..3874831Lupinus angustifoliusCDS
rna-TanjilR_19698_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3875315..3875587rna-TanjilR_19698_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3875315..3875587Lupinus angustifoliusCDS


Homology
[Close]
BLAST of rna-TanjilR_19698 vs. DB:Swiss
Match: SLAH4_ARATH (S-type anion channel SLAH4 OS=Arabidopsis thaliana OX=3702 GN=SLAH4 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 7.432e-80
Identity = 159/246 (64.63%), Postives = 189/246 (76.83%), Query Frame = 1 
Query:  133 HAGYFRXXXXXXXXXXXXXXXXEPIQDAHALRPLFSVIPSTALILLWSLALFTLVTLSFLYVLKCVFHFKMVKDEFLDHVGVNYLFVPWICCXXXXXXXXXXXXXXXYYQILWWVFVAPILVLDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQVAAQMGWKESAICMFSLGIAHYLVLFVTLYQRLPGNNNLPPMLRPVFFLFFAAPSMASLAWNSICGKFDTGSKMXXXXXXXXXICLV 870
            HAGYFRISLSL SQALL KI++           L S +PS A  LLW LAL T V+L FLY  KC+F F MVK+EF  ++GVNYL+ P I CLLLL+S+P++ P ++ YQ L+W+F  P+L LD K+YGQWFT  KRFLS +ANP SQ+SVI NLV A+ AA+MGWKE A+C+FSLG+ HYLV+FVTLYQRLPG NN P  LRPVFFLFFAAP+ ASLAWNSICG FDT +KM FFLSLF+FI LV
Sbjct:   42 HAGYFRISLSLCSQALLWKIMVH----------LHSELPSMAYYLLWYLALATQVSLCFLYAFKCIFLFDMVKEEFSHYIGVNYLYAPSISCLLLLQSAPMIEPHSVLYQTLFWIFAVPVLTLDTKLYGQWFTTEKRFLSIMANPASQVSVIANLVAARGAAEMGWKECALCLFSLGMVHYLVIFVTLYQRLPGGNNFPTTLRPVFFLFFAAPATASLAWNSICGNFDTIAKMLFFLSLFIFISLV 277

HSP 2 Score: 62.003 bits (149), Expect = 4.642e-9
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 1 
Query: 1318 LYIFLAFLNKQVSRPMLFKKSMKKFSVAWWAYSFPLTALALASTQYALEVDGVMAHATM 1494
            L+IF++     V RP L KKS+K+F+VAWWAYSFP+T LAL S QYA EV   +A   M
Sbjct:  270 LFIFISL----VCRPNLLKKSIKRFNVAWWAYSFPITFLALNSVQYAQEVKDHVASVLM 324
[Close]
BLAST of rna-TanjilR_19698 vs. DB:Swiss
Match: SLAH1_ARATH (S-type anion channel SLAH1 OS=Arabidopsis thaliana OX=3702 GN=SLAH1 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 8.073e-80
Identity = 147/233 (63.09%), Postives = 182/233 (78.11%), Query Frame = 1 
Query:  133 HAGYFRXXXXXXXXXXXXXXXXEPIQDAHALRPLFSVIPSTALILLWSLALFTLVTLSFLYVLKCVFHFKMVKDEFLDHVGVNYLFVPWICCXXXXXXXXXXXXXXXYYQILWWVFVAPILVLDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQVAAQMGWKESAICMFSLGIAHYLVLFVTLYQRLPGNNNLPPMLRPVFFLFFAAPSMASLAWNSICGKFDTGSKM 831
            HAGYFRISLSL SQALL KI+I P  ++ ++  + S +PS A  LLW LAL T V+L FLY LKC+F F  VK+EFL ++GVNYL+ P I  LL+L+S+P++ P ++ YQ L+W+F  P+L LD+K+YGQWFT  KRFLS +ANP SQ+SVI NLV A+ AA+MGW E A+CMFSLG+ HYLV+FVTLYQRLPG NN P  LRP+FFLF AAP+MASLAWNSICG FD  +KM
Sbjct:   42 HAGYFRISLSLCSQALLWKIMIAP--ESPSMSHMHSKLPSMAFHLLWYLALVTQVSLCFLYALKCIFFFDKVKEEFLHYIGVNYLYAPSISWLLMLQSAPMMEPNSVLYQTLFWIFAVPVLTLDIKLYGQWFTTEKRFLSMLANPASQVSVIANLVAARGAAEMGWNECALCMFSLGMVHYLVIFVTLYQRLPGGNNFPAKLRPIFFLFVAAPAMASLAWNSICGTFDAVAKM 272

HSP 2 Score: 66.2402 bits (160), Expect = 2.453e-10
Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1 
Query: 1318 LYIFLAFLNKQVSRPMLFKKSMKKFSVAWWAYSFPLTALALASTQYALEVDGVMAHATM 1494
            L+IF++     V RP LFKKSMK+F+VAWWAYSFPLT LAL S QYA EV   +    M
Sbjct:  278 LFIFMSL----VCRPNLFKKSMKRFNVAWWAYSFPLTFLALDSVQYAQEVKDPVGSGLM 332
[Close]
BLAST of rna-TanjilR_19698 vs. DB:Swiss
Match: SLAH3_ARATH (S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.094e-46
Identity = 90/188 (47.87%), Postives = 128/188 (68.09%), Query Frame = 1 
Query:  268 LWSLALFTLVTLSFLYVLKCVFHFKMVKDEFLDHVGVNYLFVPWICCXXXXXXXXXXXXXXXYYQILWWVFVAPILVLDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQVAAQMGWKESAICMFSLGIAHYLVLFVTLYQRLPGNNNLPPMLRPVFFLFFAAPSMASLAWNSICGKFDTGSKM 831
            LW +++  ++T++ +Y+LK +  F+ V+ E+   + +N+ F P+I  L L    P    T L +  LW++ + P + L++KIYGQW + G+R LS VANPT+ LSV+GN VGA + A MG +E  I  +++G+AHYLVLFVTLYQRLP N  LP  L PVFFLF AAPS+AS+AW  + G FD GSK+
Sbjct:  298 LWFISVALILTIATIYLLKIILFFEAVRREYYHPIRINFFFAPFISLLFLALGVPPSIITDLPH-FLWYLLMFPFICLELKIYGQWMSGGQRRLSRVANPTNHLSVVGNFVGALLGASMGLREGPIFFYAVGMAHYLVLFVTLYQRLPTNETLPKDLHPVFFLFVAAPSVASMAWAKVTGSFDYGSKV 484
[Close]
BLAST of rna-TanjilR_19698 vs. DB:Swiss
Match: SLAH2_ARATH (S-type anion channel SLAH2 OS=Arabidopsis thaliana OX=3702 GN=SLAH2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.260e-45
Identity = 92/189 (48.68%), Postives = 123/189 (65.08%), Query Frame = 1 
Query:  265 LLWSLALFTLVTLSFLYVLKCVFHFKMVKDEFLDHVGVNYLFVPWICCXXXXXXXXXXXXXXXYYQILWWVFVAPILVLDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQVAAQMGWKESAICMFSLGIAHYLVLFVTLYQRLPGNNNLPPMLRPVFFLFFAAPSMASLAWNSICGKFDTGSKM 831
            +LW ++L  L+ +S  Y+ K +  F+ V+ EF   + VN+ F P I  L L    P    + L    LW+  +APIL L++KIYGQW + G+R LS VANPT+ LS++GN  GA + A MG KE  I  F++G+A+YLVLFVTLYQRLP N  LP  L PVFFLF AAP++AS+AW  I   FD GS++
Sbjct:  182 VLWWISLLLLLAVSITYLFKTILFFEAVRREFRHPIRVNFFFAPLISILFLALGIPHSIISHLP-STLWYFLMAPILFLEMKIYGQWMSGGQRRLSKVANPTNHLSIVGNFAGALLGASMGLKEGPIFFFAIGLAYYLVLFVTLYQRLPTNETLPKELHPVFFLFVAAPAVASMAWTKISASFDLGSRL 369
[Close]
BLAST of rna-TanjilR_19698 vs. DB:Swiss
Match: SLAC1_ARATH (Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.000e-45
Identity = 94/191 (49.21%), Postives = 132/191 (69.11%), Query Frame = 1 
Query:  262 ILLWSLALFTLVTLSFLYVLKCVFHFKMVKDEFLDHVGVNYLFVPWICCXXXXXXXXXXXXXXXYY--QILWWVFVAPILVLDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQVAAQMGWKESAICMFSLGIAHYLVLFVTLYQRLPGNNNLPPMLRPVFFLFFAAPSMASLAWNSICGKFDTGSK 828
            +++W  +L  LV++SF Y+LKC+F+F+ VK E+   V VN+ F PW+ C+ L  S P +      Y    +W VF+ P   L++KIYGQW + GKR L  VANP+S LSV+GN VGA +A+++GW E A  ++++G AHYLV+FVTLYQRLP +  LP  L PV+ +F AAPS AS+AWN+I G+FD  S+
Sbjct:  226 LVVWLFSLVVLVSVSFTYILKCIFYFEAVKREYFHPVRVNFFFAPWVVCMFLAISVPPMFSPNRKYLHPAIWCVFMGPYFFLELKIYGQWLSGGKRRLCKVANPSSHLSVVGNFVGAILASKVGWDEVAKFLWAVGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIAAPSAASIAWNTIYGQFDGCSR 416
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_19698 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
SLAH4_ARATH7.432e-8064.63S-type anion channel SLAH4 OS=Arabidopsis thaliana... [more]
SLAH1_ARATH8.073e-8063.09S-type anion channel SLAH1 OS=Arabidopsis thaliana... [more]
SLAH3_ARATH8.094e-4647.87S-type anion channel SLAH3 OS=Arabidopsis thaliana... [more]
SLAH2_ARATH1.260e-4548.68S-type anion channel SLAH2 OS=Arabidopsis thaliana... [more]
SLAC1_ARATH2.000e-4549.21Guard cell S-type anion channel SLAC1 OS=Arabidops... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004695Voltage-dependent anion channelPFAMPF03595SLAC1coord: 44..355
e-value: 7.4E-44
score: 150.3
IPR038665Voltage-dependent anion channel superfamilyGENE3D1.50.10.150coord: 39..362
e-value: 3.7E-67
score: 228.7
NoneNo IPR availableCDDcd09323TDT_SLAC1_likecoord: 82..355
e-value: 4.70569E-67
score: 212.022

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_19698_La_Tanjil_v1.0 ID=rna-TanjilR_19698_La_Tanjil_v1.0; Name=rna-TanjilR_19698; organism=Lupinus angustifolius; type=mRNA; length=1623bp
ATGGATAGCAGTGAGGAACAATCACAACCACATATAGTACTAGCAATAGA
TGTTCCTGTGACAAATACTGAAACAATTTGCAAGTCTCAAATCTATATCC
AATCTTCATTATCCTCATTTCTAGCACTATTCCATGCAGGGTACTTTAGG
ATTAGTTTATCTCTTTCTAGCCAAGCCTTATTATTGAAGATCCTGATTGA
GCCAATCCAAGATGCACATGCTCTTAGGCCTTTATTTTCAGTAATACCCT
CAACAGCTTTAATTCTCTTATGGTCACTGGCCTTATTCACATTAGTCACG
CTCTCTTTTCTCTATGTCCTAAAATGTGtgtttcattttaaaatggttAA
GGATGAATTCTTAGACCATGTTGGAGTAAACTACCTATTTGTTCCATGGA
TTTGTTGTCTACTTTTGCTAGAATCTTCACCACTCCTTCACCCAACAACA
CTTTATTACCAAATACTTTGGTGGGTGTTTGTGGCTCCAATATTGGTGCT
TGATGTAAAGATATATGGTCAGTGGTTTACAAAAGGGAAGAGGTTCCTAT
CAACAGTGGCAAATCCAACAAGTCAATTATCTGTGATTGGAAACTTGGTT
GGTGCACAGGTTGCTGCACAAATGGGTTGGAAGGAGAGTGCAATATGCAT
GTTTTCTTTGGGTATTGCACATTATTTGGTGCTTTTCGTGACACTGTATC
AGAGATTGCCAGGAAATAATAATCTACCTCCAATGCTACGTCCAGTGTTC
TTTTTGTTCTTTGCAGCACCTAGCATGGCAAGCTTAGCTTGGAACTCCAT
TTGTGGCAAGTTTGATACTGGTTCCAAGATGTTTTTCTTCCTCTCCCTCT
TTCTCTTCATATGCCTGgtaacttttctttctttaatgTAAGATATCAAA
GTGAAGTAAAAGAACTGATTGAATTCCAAGGAAAGCTTAATCATTTTGCT
TAATCATTTTGCTTGGAACTAATTGAATTCCAAGGAAAGCTTCAAGCTGT
TACTTgtacaataattttttacaaaatattcacatttctctatatatatt
aacatgtgatatctcaatatccactCACACTCATATTATACATATCTAAA
GTAACATAAATCAATTATATGTAGACAATAATTACAATATGCATGTTTTT
ATGTTCAACCATCtcttttatttcaatatattatgCATATCTAGCTAGTT
TTTGCTCATGCAATTTTGGAGGGAAGAGCTTGATTAGGTAAAGTAATTCA
AGTGTcaactttaatattataaaaaatgttaaataaaataaaataaaaat
catgcaTGGTTAgataactatatatttttcttgCATTTTTGAACAAACAG
GTTTCAAGGCCTATGCTATTTAAGAAGTCGATGAAGAAGTTCAGTGTAGC
ATGGTGGGCTTATTCTTTTCCTCTGACGGCTTTGGCACTAGCTTCAACAC
AATATGCACTAGAGGTTGATGGAGTCATGGCTCATGCTACTATGTTGCTG
TTATCAACACTTTCTGTTTTGGTGTCTCTTATCTTAATAATTTTCACTTC
TCTCAACATCAGAATGCCCTTACCTGCTCAAAACTTTGACTTGACAAAGA
AAAGCAATTGTGAAGCAACATGA
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protein sequence of rna-TanjilR_19698_La_Tanjil_v1.0

>rna-TanjilR_19698_La_Tanjil_v1.0 ID=rna-TanjilR_19698_La_Tanjil_v1.0; Name=rna-TanjilR_19698_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=379bp
MDSSEEQSQPHIVLAIDVPVTNTETICKSQIYIQSSLSSFLALFHAGYFR
ISLSLSSQALLLKILIEPIQDAHALRPLFSVIPSTALILLWSLALFTLVT
LSFLYVLKCVFHFKMVKDEFLDHVGVNYLFVPWICCLLLLESSPLLHPTT
LYYQILWWVFVAPILVLDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLV
GAQVAAQMGWKESAICMFSLGIAHYLVLFVTLYQRLPGNNNLPPMLRPVF
FLFFAAPSMASLAWNSICGKFDTGSKMFFFLSLFLFICLVSRPMLFKKSM
KKFSVAWWAYSFPLTALALASTQYALEVDGVMAHATMLLLSTLSVLVSLI
LIIFTSLNIRMPLPAQNFDLTKKSNCEAT
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mRNA from alignment at Chr_LG13-CM007373.1:3873965..3875587+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_19698_La_Tanjil_v1.0 ID=rna-TanjilR_19698_La_Tanjil_v1.0; Name=rna-TanjilR_19698; organism=Lupinus angustifolius; type=mRNA; length=1623bp; location=Sequence derived from: Chr_LG13-CM007373.1:3873965..3875587+ (Lupinus angustifolius
ATGGATAGCAGTGAGGAACAATCACAACCACATATAGTACTAGCAATAGA
TGTTCCTGTGACAAATACTGAAACAATTTGCAAGTCTCAAATCTATATCC
AATCTTCATTATCCTCATTTCTAGCACTATTCCATGCAGGGTACTTTAGG
ATTAGTTTATCTCTTTCTAGCCAAGCCTTATTATTGAAGATCCTGATTGA
GCCAATCCAAGATGCACATGCTCTTAGGCCTTTATTTTCAGTAATACCCT
CAACAGCTTTAATTCTCTTATGGTCACTGGCCTTATTCACATTAGTCACG
CTCTCTTTTCTCTATGTCCTAAAATGTGtgtttcattttaaaatggttAA
GGATGAATTCTTAGACCATGTTGGAGTAAACTACCTATTTGTTCCATGGA
TTTGTTGTCTACTTTTGCTAGAATCTTCACCACTCCTTCACCCAACAACA
CTTTATTACCAAATACTTTGGTGGGTGTTTGTGGCTCCAATATTGGTGCT
TGATGTAAAGATATATGGTCAGTGGTTTACAAAAGGGAAGAGGTTCCTAT
CAACAGTGGCAAATCCAACAAGTCAATTATCTGTGATTGGAAACTTGGTT
GGTGCACAGGTTGCTGCACAAATGGGTTGGAAGGAGAGTGCAATATGCAT
GTTTTCTTTGGGTATTGCACATTATTTGGTGCTTTTCGTGACACTGTATC
AGAGATTGCCAGGAAATAATAATCTACCTCCAATGCTACGTCCAGTGTTC
TTTTTGTTCTTTGCAGCACCTAGCATGGCAAGCTTAGCTTGGAACTCCAT
TTGTGGCAAGTTTGATACTGGTTCCAAGATGTTTTTCTTCCTCTCCCTCT
TTCTCTTCATATGCCTGgtaacttttctttctttaatgTAAGATATCAAA
GTGAAGTAAAAGAACTGATTGAATTCCAAGGAAAGCTTAATCATTTTGCT
TAATCATTTTGCTTGGAACTAATTGAATTCCAAGGAAAGCTTCAAGCTGT
TACTTgtacaataattttttacaaaatattcacatttctctatatatatt
aacatgtgatatctcaatatccactCACACTCATATTATACATATCTAAA
GTAACATAAATCAATTATATGTAGACAATAATTACAATATGCATGTTTTT
ATGTTCAACCATCtcttttatttcaatatattatgCATATCTAGCTAGTT
TTTGCTCATGCAATTTTGGAGGGAAGAGCTTGATTAGGTAAAGTAATTCA
AGTGTcaactttaatattataaaaaatgttaaataaaataaaataaaaat
catgcaTGGTTAgataactatatatttttcttgCATTTTTGAACAAACAG
GTTTCAAGGCCTATGCTATTTAAGAAGTCGATGAAGAAGTTCAGTGTAGC
ATGGTGGGCTTATTCTTTTCCTCTGACGGCTTTGGCACTAGCTTCAACAC
AATATGCACTAGAGGTTGATGGAGTCATGGCTCATGCTACTATGTTGCTG
TTATCAACACTTTCTGTTTTGGTGTCTCTTATCTTAATAATTTTCACTTC
TCTCAACATCAGAATGCCCTTACCTGCTCAAAACTTTGACTTGACAAAGA
AAAGCAATTGTGAAGCAACATGA
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Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3873965..3875587+

>rna-TanjilR_19698_La_Tanjil_v1.0 ID=rna-TanjilR_19698_La_Tanjil_v1.0; Name=rna-TanjilR_19698; organism=Lupinus angustifolius; type=CDS; length=1140bp; location=Sequence derived from: Chr_LG13-CM007373.1:3873965..3875587+ (Lupinus angustifolius
ATGGATAGCAGTGAGGAACAATCACAACCACATATAGTACTAGCAATAGA
TGTTCCTGTGACAAATACTGAAACAATTTGCAAGTCTCAAATCTATATCC
AATCTTCATTATCCTCATTTCTAGCACTATTCCATGCAGGGTACTTTAGG
ATTAGTTTATCTCTTTCTAGCCAAGCCTTATTATTGAAGATCCTGATTGA
GCCAATCCAAGATGCACATGCTCTTAGGCCTTTATTTTCAGTAATACCCT
CAACAGCTTTAATTCTCTTATGGTCACTGGCCTTATTCACATTAGTCACG
CTCTCTTTTCTCTATGTCCTAAAATGTGtgtttcattttaaaatggttAA
GGATGAATTCTTAGACCATGTTGGAGTAAACTACCTATTTGTTCCATGGA
TTTGTTGTCTACTTTTGCTAGAATCTTCACCACTCCTTCACCCAACAACA
CTTTATTACCAAATACTTTGGTGGGTGTTTGTGGCTCCAATATTGGTGCT
TGATGTAAAGATATATGGTCAGTGGTTTACAAAAGGGAAGAGGTTCCTAT
CAACAGTGGCAAATCCAACAAGTCAATTATCTGTGATTGGAAACTTGGTT
GGTGCACAGGTTGCTGCACAAATGGGTTGGAAGGAGAGTGCAATATGCAT
GTTTTCTTTGGGTATTGCACATTATTTGGTGCTTTTCGTGACACTGTATC
AGAGATTGCCAGGAAATAATAATCTACCTCCAATGCTACGTCCAGTGTTC
TTTTTGTTCTTTGCAGCACCTAGCATGGCAAGCTTAGCTTGGAACTCCAT
TTGTGGCAAGTTTGATACTGGTTCCAAGATGTTTTTCTTCCTCTCCCTCT
TTCTCTTCATATGCCTGGTTTCAAGGCCTATGCTATTTAAGAAGTCGATG
AAGAAGTTCAGTGTAGCATGGTGGGCTTATTCTTTTCCTCTGACGGCTTT
GGCACTAGCTTCAACACAATATGCACTAGAGGTTGATGGAGTCATGGCTC
ATGCTACTATGTTGCTGTTATCAACACTTTCTGTTTTGGTGTCTCTTATC
TTAATAATTTTCACTTCTCTCAACATCAGAATGCCCTTACCTGCTCAAAA
CTTTGACTTGACAAAGAAAAGCAATTGTGAAGCAACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004695SLAC1/Mae1/Ssu1/TehA
IPR038665Voltage-dep_anion_channel_sf
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane