rna-TanjilR_12382

Transcript Overview
Namerna-TanjilR_12382
Unique Namerna-TanjilR_12382_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1844
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG14-CM007374.1supercontigChr_LG14-CM007374.1:15694051..15695894 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL076Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR262Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR270Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR280Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0386Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0327Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0339Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0427Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0389Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0399Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0297Pisum sativum Cameor genome v1aPisum sativum
anpsR0304Pisum sativum Cameor genome v1aPisum sativum
anpvR0361Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0389Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0393Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0318Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0321Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0363Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0334Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0344Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0321Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0339Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0321Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0344Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0314Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0335Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0292Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0359Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0305Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0384Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0391Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0288Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0301Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0349Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0366Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0328Cicer arietinum
ancarR0332Cicer arietinum
anccaR0297Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0307Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0351Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0366Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0375Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0342Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0365Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0356Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0368Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0359Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0372Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0380Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0382Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anpvfR0365Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0302Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0382Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0307Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0399Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0404Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.03G179600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cc_v2.0_10891.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun08g016100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.3g230160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_10817Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.03G280900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_004499090.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Tiffany.R1.3g187320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
XM_058866273.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_01G02497.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg35190.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.001G014800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va07G069920.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr08.569.1.6211316dVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vum_03G01979.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat06G0021000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigan.01G334600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
jg17035.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
PvulFLAVERTChr03.1530Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_014649290.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
PvulFLAVERTChr01.1000117Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.01G228200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat6g006800.1Pisum sativum Cameor genome v1aPisum sativum
Vigun08g016100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_14711Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_24438Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_12382gene-TanjilG_12382_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_12382rna-TanjilR_12382_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_12382_La_Tanjil_v1.0rna-TanjilR_12382_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694051..15694119rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694051..15694119Lupinus angustifoliusexon
rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694504..15694680rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694504..15694680Lupinus angustifoliusexon
rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694782..15694880rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694782..15694880Lupinus angustifoliusexon
rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15695231..15695476rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15695231..15695476Lupinus angustifoliusexon
rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15695592..15695894rna-TanjilR_12382_La_Tanjil_v1.0-exon-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15695592..15695894Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694051..15694119rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694051..15694119Lupinus angustifoliusCDS
rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694504..15694680rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694504..15694680Lupinus angustifoliusCDS
rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694782..15694880rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15694782..15694880Lupinus angustifoliusCDS
rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15695231..15695476rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15695231..15695476Lupinus angustifoliusCDS
rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15695592..15695894rna-TanjilR_12382_La_Tanjil_v1.0-CDS-Chr_LG14-CM007374.1_La_Tanjil_v1.0-1579734366:15695592..15695894Lupinus angustifoliusCDS


Homology
[Close]
BLAST of rna-TanjilR_12382 vs. DB:Swiss
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.409e-13
Identity = 41/98 (41.84%), Postives = 55/98 (56.12%), Query Frame = 2 
Query: 1148 SKKKTKCMLL----QNTSSIENQIRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSLRSSVPIKSAKETASILQNHYPERLAIAFLYNPPWVFETFWKV 1429
             K    C+ L    QNT +   QIRHLV+ LE A+  +PPG E ++ LI+F   S RS+  +   KE  +ILQ HY ERL  A + N PW    F+K+
Sbjct:  691 DKDGRPCLYLYPARQNTKTSPLQIRHLVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIPWAVWGFFKL 788

HSP 2 Score: 28.4906 bits (62), Expect = 9.409e-13
Identity = 14/55 (25.45%), Postives = 28/55 (50.91%), Query Frame = 3 
Query: 1539 QIVKYFLDTKTFQKVKFVYPKNKDSMELMNSYFDEENLPKELGGKSKLDYNHEEF 1703
            +++  F+D  T +K+KF  P        ++ Y  ++ L    GG    +Y+HE++
Sbjct:  787 KLISPFIDPITREKLKFNEP--------LDRYVPKDQLDSNFGGSLHFEYHHEKY 833
[Close]
BLAST of rna-TanjilR_12382 vs. DB:Swiss
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR16 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.707e-12
Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = 2 
Query: 1178 QNTSSIENQIRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSLRSSVP-------IKSAKETASILQNHYPERLAIAFLYNPPWVFETFWKV 1429
            QNT +   Q++HLV++LE  +  +P GQ+ ++ LIDF  +     VP       I   KE   ILQ HYPERL  A L N PW+  TF K+
Sbjct:  165 QNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKL 255
[Close]
BLAST of rna-TanjilR_12382 vs. DB:Swiss
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR17 PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.847e-8
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 2 
Query: 1178 QNTSSIENQIRHLVYLLENAMLNLPPGQEQMSWLIDFT-----GWSLRSSVPIKSAKETASILQNHYPERLAIAFLYNPPWVFETFWKV 1429
            QNT S   Q++ LVY++E A    P G E+++ L+DF      G     + PI  A+   +++Q+HYPERLA   L N PW    F K+
Sbjct:  169 QNTESSFRQVQELVYMMETATTVAPQGVEKITVLVDFKSYKEPGIITDKAPPISIARMCLNVMQDHYPERLAKCVLINIPWFAWAFLKM 257
[Close]
BLAST of rna-TanjilR_12382 vs. DB:Swiss
Match: PITC_DICDI (Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1)

HSP 1 Score: 42.743 bits (99), Expect = 2.497e-7
Identity = 26/87 (29.89%), Postives = 47/87 (54.02%), Query Frame = 2 
Query: 1175 LQNTSSIENQIRHLVYLLENAM--LNLPPGQEQMSWLIDFTGWSLRSSVPIKSAKETASILQNHYPERLAIAFLYNPPWVFETFWKV 1429
            L+N  S E + ++LVY LE     ++ P G EQ  +++D+  +    ++ +K+  E    L +H PER+  +   +PP +F   WK+
Sbjct:  146 LKNVPS-ELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFG-SGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKI 230

HSP 2 Score: 35.039 bits (79), Expect = 2.497e-7
Identity = 23/61 (37.70%), Postives = 33/61 (54.10%), Query Frame = 3 
Query: 1539 QIVKYFLDTKTFQKVKFVYPKNKDS----MELMNSYFDEENLPKELGGKSKLDYNHEEFSK 1709
            +I+  FL+  T  KV+F+  K  D      EL+  Y D ENL + LGG    +YN +E+ K
Sbjct:  229 KIISPFLNEVTLSKVRFINSKKVDGKRTFAELL-EYVDIENLEQNLGGNLDYNYNIDEYLK 288
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_12382 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
YJX4_SCHPO9.409e-1341.84CRAL-TRIO domain-containing protein C23B6.04c OS=S... [more]
PDR16_YEAST6.707e-1241.76Phosphatidylinositol transfer protein PDR16 OS=Sac... [more]
PDR17_YEAST1.847e-838.20Phosphatidylinositol transfer protein PDR17 OS=Sac... [more]
PITC_DICDI2.497e-729.89Phosphatidylinositol transfer protein 3 OS=Dictyos... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011074CRAL/TRIO, N-terminal domainSMARTSM01100CRAL_TRIO_N_2coord: 43..68
e-value: 8.2E-7
score: 38.6
IPR011074CRAL/TRIO, N-terminal domainPFAMPF03765CRAL_TRIO_Ncoord: 44..67
e-value: 4.5E-6
score: 26.8
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 88..243
e-value: 2.6E-51
score: 186.5
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 89..241
e-value: 7.8E-39
score: 132.9
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 82..246
score: 20.95
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 100..241
e-value: 2.16837E-46
score: 151.769
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 3..276
e-value: 3.5E-84
score: 284.6
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 82..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
IPR036273CRAL/TRIO, N-terminal domain superfamilySUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 11..84

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_12382_La_Tanjil_v1.0 ID=rna-TanjilR_12382_La_Tanjil_v1.0; Name=rna-TanjilR_12382; organism=Lupinus angustifolius; type=mRNA; length=1844bp
ATGTTTCACCGCAAGAGTAATTCACAGCATGAAAACGAAGGTCACGAGCA
GCTTCAGAACGAATCCAAGGTATCGAGTTGAGTTTGTTTTGCTTTGCTTT
GCCGTGGCGGTTTTGAATTGCGGTTCACAACTGCGGCCACATTGATCGCA
TATTCCCGCAATTGTCCTTAATCGGACTCGATACGATGAAATTGCGGCCA
TGACCGTAACCGCTATTTAAAACCTAAGATGTAAAAAAAAGTGGCCTAAT
ACACGAGACTCTCACTTAGTGGGTTTGGAGATTATATCTGTACGCAGTCT
GACCCCGGCAAACAGACACATTGTTTACGGGATTTGAAACCATGACCTCA
TCGTCACTAAGTAGCAACAACTTTAATGTTGCATCAAACTCACCTTTTAG
ATGTAAATATGTGATATTAAGGTTTGTGctgaatatgaaaattgtatgtG
CAGATTAAAGAGCTTGAGGATGCAATTGGACCCTTATCTGGGAACAGCTT
AAAGTACTGCACTGCTGCTTGTTTGAGGAGATATCTGGAAGCTCGCAACT
GGAATGTAGACAAGTCCAAGAAGATGTTGGAGGACACACTCAGGTGGAGA
TCAACCTATAAGCCCGAGTATATCCGCTGGGTAAGCTTTGCTTTGTAATT
TGTAGTATTTGGTCCCTGTATTTGGTGATTTGATGTTATATCATATGGTC
TGAAATGCTGTGAGGTAATGTCATTTCTCAGAATGAGGTTGCTGGGGAAG
GAGAGACCGGAAAACTGTACAGAGCAAATTTTCATGACCGACAAGGAAGG
ACAGTTCTTATATTGAGGCCTGGAAAGCAGGTACCGTAGTTTTGACATTT
TACTTTCACATTAATTTCCGAAGAGTTCTTGTGTGAGCTAAATAATTGCT
GGTCCGGTGTTTTCAACTAGAGTCTGCCAAACCGAATCTGgtgaatgaat
tgaataattcTTTTTACTAATGGGTGTGTATTAACTTAGCTGTAgcatta
ataatgtaatagAAATGGGAAACAAACAGTTATGGCTCACATAGCAGAGA
TGGTACATATCATAATCAGAAAATTTTCTTGTTCCATGAGCATGCACTAT
GTTTGCCCATTTACTATTTCATAATGTTGTCGAGCTACAATGAGGTCtca
aaaaagaaaactaaatgTATGTTGTTGCAGAACACATCTTCAATTGAGAA
TCAGATTCGGCATCTGGTGTATCTTCTGGAAAATGCTATGCTTAACCTTC
CACCAGGTCAGGAACAAATGTCATGGTTAATAGACTTCACTGGATGGTCA
TTGAGAAGCAGTGTGCCCATTAAATCAGCCAAAGAGACTGCCAGCATCTT
ACAGAACCACTATCCCGAGAGGCTTGCCATAGCATTTCTTTACAACCCCC
CTTGggtttttgaaactttttggaAGGTTTGTAATCTCTGCTAGCATCTG
TAAAATCTTCCTTGCCCCAATGATCACTAAAATTGGTAGTGATCCCATTT
AAGTACTTAAGAAGTTACCGGTTCTACTTATCTTAATGCAGATAGTGAAG
TATTTCTTGGATACTAAGACATTTCAGAAGGTGAAGTTTGTTTACCCCAA
AAACAAAGATAGTATGGAGCTCATGAATTCTTATTTTGATGAGGAGAATC
TACCCAAAGAACTAGGAGGAAAAAGCAAATTGGACTACAACCATGAGGAA
TTTTCCAAATTAATGACTCAGGATGATTTGAAATCTGCAGCCTTTTGGGG
ATCTGATGACAAGCTCCCAAGCTACGTTGGTAACGGGCGTTCGGGAGCAG
AGGTAGCCCCAGATCCAGCTTGCCATGAAACTGCGGCGACCTGA
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protein sequence of rna-TanjilR_12382_La_Tanjil_v1.0

>rna-TanjilR_12382_La_Tanjil_v1.0 ID=rna-TanjilR_12382_La_Tanjil_v1.0; Name=rna-TanjilR_12382_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=297bp
MFHRKSNSQHENEGHEQLQNESKIKELEDAIGPLSGNSLKYCTAACLRRY
LEARNWNVDKSKKMLEDTLRWRSTYKPEYIRWNEVAGEGETGKLYRANFH
DRQGRTVLILRPGKQNTSSIENQIRHLVYLLENAMLNLPPGQEQMSWLID
FTGWSLRSSVPIKSAKETASILQNHYPERLAIAFLYNPPWVFETFWKIVK
YFLDTKTFQKVKFVYPKNKDSMELMNSYFDEENLPKELGGKSKLDYNHEE
FSKLMTQDDLKSAAFWGSDDKLPSYVGNGRSGAEVAPDPACHETAAT
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mRNA from alignment at Chr_LG14-CM007374.1:15694051..15695894+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_12382_La_Tanjil_v1.0 ID=rna-TanjilR_12382_La_Tanjil_v1.0; Name=rna-TanjilR_12382; organism=Lupinus angustifolius; type=mRNA; length=1844bp; location=Sequence derived from: Chr_LG14-CM007374.1:15694051..15695894+ (Lupinus angustifolius
ATGTTTCACCGCAAGAGTAATTCACAGCATGAAAACGAAGGTCACGAGCA
GCTTCAGAACGAATCCAAGGTATCGAGTTGAGTTTGTTTTGCTTTGCTTT
GCCGTGGCGGTTTTGAATTGCGGTTCACAACTGCGGCCACATTGATCGCA
TATTCCCGCAATTGTCCTTAATCGGACTCGATACGATGAAATTGCGGCCA
TGACCGTAACCGCTATTTAAAACCTAAGATGTAAAAAAAAGTGGCCTAAT
ACACGAGACTCTCACTTAGTGGGTTTGGAGATTATATCTGTACGCAGTCT
GACCCCGGCAAACAGACACATTGTTTACGGGATTTGAAACCATGACCTCA
TCGTCACTAAGTAGCAACAACTTTAATGTTGCATCAAACTCACCTTTTAG
ATGTAAATATGTGATATTAAGGTTTGTGctgaatatgaaaattgtatgtG
CAGATTAAAGAGCTTGAGGATGCAATTGGACCCTTATCTGGGAACAGCTT
AAAGTACTGCACTGCTGCTTGTTTGAGGAGATATCTGGAAGCTCGCAACT
GGAATGTAGACAAGTCCAAGAAGATGTTGGAGGACACACTCAGGTGGAGA
TCAACCTATAAGCCCGAGTATATCCGCTGGGTAAGCTTTGCTTTGTAATT
TGTAGTATTTGGTCCCTGTATTTGGTGATTTGATGTTATATCATATGGTC
TGAAATGCTGTGAGGTAATGTCATTTCTCAGAATGAGGTTGCTGGGGAAG
GAGAGACCGGAAAACTGTACAGAGCAAATTTTCATGACCGACAAGGAAGG
ACAGTTCTTATATTGAGGCCTGGAAAGCAGGTACCGTAGTTTTGACATTT
TACTTTCACATTAATTTCCGAAGAGTTCTTGTGTGAGCTAAATAATTGCT
GGTCCGGTGTTTTCAACTAGAGTCTGCCAAACCGAATCTGgtgaatgaat
tgaataattcTTTTTACTAATGGGTGTGTATTAACTTAGCTGTAgcatta
ataatgtaatagAAATGGGAAACAAACAGTTATGGCTCACATAGCAGAGA
TGGTACATATCATAATCAGAAAATTTTCTTGTTCCATGAGCATGCACTAT
GTTTGCCCATTTACTATTTCATAATGTTGTCGAGCTACAATGAGGTCtca
aaaaagaaaactaaatgTATGTTGTTGCAGAACACATCTTCAATTGAGAA
TCAGATTCGGCATCTGGTGTATCTTCTGGAAAATGCTATGCTTAACCTTC
CACCAGGTCAGGAACAAATGTCATGGTTAATAGACTTCACTGGATGGTCA
TTGAGAAGCAGTGTGCCCATTAAATCAGCCAAAGAGACTGCCAGCATCTT
ACAGAACCACTATCCCGAGAGGCTTGCCATAGCATTTCTTTACAACCCCC
CTTGggtttttgaaactttttggaAGGTTTGTAATCTCTGCTAGCATCTG
TAAAATCTTCCTTGCCCCAATGATCACTAAAATTGGTAGTGATCCCATTT
AAGTACTTAAGAAGTTACCGGTTCTACTTATCTTAATGCAGATAGTGAAG
TATTTCTTGGATACTAAGACATTTCAGAAGGTGAAGTTTGTTTACCCCAA
AAACAAAGATAGTATGGAGCTCATGAATTCTTATTTTGATGAGGAGAATC
TACCCAAAGAACTAGGAGGAAAAAGCAAATTGGACTACAACCATGAGGAA
TTTTCCAAATTAATGACTCAGGATGATTTGAAATCTGCAGCCTTTTGGGG
ATCTGATGACAAGCTCCCAAGCTACGTTGGTAACGGGCGTTCGGGAGCAG
AGGTAGCCCCAGATCCAGCTTGCCATGAAACTGCGGCGACCTGA
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Coding sequence (CDS) from alignment at Chr_LG14-CM007374.1:15694051..15695894+

>rna-TanjilR_12382_La_Tanjil_v1.0 ID=rna-TanjilR_12382_La_Tanjil_v1.0; Name=rna-TanjilR_12382; organism=Lupinus angustifolius; type=CDS; length=894bp; location=Sequence derived from: Chr_LG14-CM007374.1:15694051..15695894+ (Lupinus angustifolius
ATGTTTCACCGCAAGAGTAATTCACAGCATGAAAACGAAGGTCACGAGCA
GCTTCAGAACGAATCCAAGATTAAAGAGCTTGAGGATGCAATTGGACCCT
TATCTGGGAACAGCTTAAAGTACTGCACTGCTGCTTGTTTGAGGAGATAT
CTGGAAGCTCGCAACTGGAATGTAGACAAGTCCAAGAAGATGTTGGAGGA
CACACTCAGGTGGAGATCAACCTATAAGCCCGAGTATATCCGCTGGAATG
AGGTTGCTGGGGAAGGAGAGACCGGAAAACTGTACAGAGCAAATTTTCAT
GACCGACAAGGAAGGACAGTTCTTATATTGAGGCCTGGAAAGCAGAACAC
ATCTTCAATTGAGAATCAGATTCGGCATCTGGTGTATCTTCTGGAAAATG
CTATGCTTAACCTTCCACCAGGTCAGGAACAAATGTCATGGTTAATAGAC
TTCACTGGATGGTCATTGAGAAGCAGTGTGCCCATTAAATCAGCCAAAGA
GACTGCCAGCATCTTACAGAACCACTATCCCGAGAGGCTTGCCATAGCAT
TTCTTTACAACCCCCCTTGggtttttgaaactttttggaAGATAGTGAAG
TATTTCTTGGATACTAAGACATTTCAGAAGGTGAAGTTTGTTTACCCCAA
AAACAAAGATAGTATGGAGCTCATGAATTCTTATTTTGATGAGGAGAATC
TACCCAAAGAACTAGGAGGAAAAAGCAAATTGGACTACAACCATGAGGAA
TTTTCCAAATTAATGACTCAGGATGATTTGAAATCTGCAGCCTTTTGGGG
ATCTGATGACAAGCTCCCAAGCTACGTTGGTAACGGGCGTTCGGGAGCAG
AGGTAGCCCCAGATCCAGCTTGCCATGAAACTGCGGCGACCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011074CRAL/TRIO_N_dom
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf
IPR036273CRAL/TRIO_N_dom_sf