rna-TanjilR_28916
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_ORYSJ (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0688000 PE=2 SV=1) HSP 1 Score: 476.478 bits (1225), Expect = 2.372e-169 Identity = 214/320 (66.88%), Postives = 256/320 (80.00%), Query Frame = 1 Query: 1 MGSANGLATAQGRPPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQSAVKEWNTHQKHKFVVNFGDIVDGFCPKDQSLNTIKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELLPLLNIRTLDDRAYYDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPNEDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHFNP 960 M NG+ A R PLFSFG+I+DVQYADIPDGRSFLGVPRYYRHSI VLQ AV WN KF +NFGDI+DG+CPKD+SL ++KV+DEFE F GP YHM GNHCLYNLPR +L+ LL + T DRAYYDFSP PEYRFVVLD YD SA+GWP DHP T EA+ FL EKNPN DKNSP+GLVG++RRF+MFNG VGKEQ+ WL+ VL +AS Q V++C HLP+ PGSA+ AL+WN+DEVM ++ +Y CVK C AGH+HKGG+S+DSHGVHHR LEAALECPPGT AFG+++VY D++ L+G+DKM T+M F P Sbjct: 2 MAVTNGVIHASSREPLFSFGVIADVQYADIPDGRSFLGVPRYYRHSISVLQRAVSTWNKQHNIKFSINFGDIIDGYCPKDKSLWAVQKVLDEFEKFDGPTYHMFGNHCLYNLPRGKLVSLLKMPTDSDRAYYDFSPCPEYRFVVLDAYDFSALGWPRDHPVTAEAMKFLEEKNPNSDKNSPDGLVGVDRRFVMFNGGVGKEQLSWLNDVLQDASARRQNVILCSHLPMDPGSASFAALMWNYDEVMAIVRQYKCVKACFAGHDHKGGHSVDSHGVHHRTLEAALECPPGTSAFGHIEVYPDKLLLVGSDKMADTEMCFEP 321
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_ARATH (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Arabidopsis thaliana OX=3702 GN=At4g24730 PE=2 SV=1) HSP 1 Score: 447.203 bits (1149), Expect = 5.273e-158 Identity = 218/316 (68.99%), Postives = 254/316 (80.38%), Query Frame = 1 Query: 1 MGSANGLATAQGRPPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQSAVKEWNTHQKHKFVVNFGDIVDGFCPKDQSLNTIKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELLPLLNIRTLDDRAYYDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPNEDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDM 948 MGSA R PLFSFG+I+DVQYADI DGRSFLGVPRYYR+SILVLQ AV+ WN H KFV+N GDIVDGFCPKDQSL KK+V EFE F GP+YHMIGNHCLYNLPR ELLPLL I D AYYDFSP PEYR VVLDGYDISA+GWP +HP T AL L EKNPN DKNSP GL + RRF+ +NG VG++Q+ WLD VL +AS Q+V+VC H+P+ PG A+ ALLWNFDEVM++IH+Y+ VKVCL+GH+HKGGY +DSHGVHHR LEAALECPPGT +FGY+DVYD+++SL+GTD+M+STD Sbjct: 1 MGSA-------ARQPLFSFGVIADVQYADISDGRSFLGVPRYYRNSILVLQRAVETWNQHGNLKFVINMGDIVDGFCPKDQSLAATKKLVHEFEKFNGPVYHMIGNHCLYNLPREELLPLLKIPGRDGNAYYDFSPTPEYRVVVLDGYDISAVGWPQEHPNTIAALKILEEKNPNTDKNSPAGLEDVARRFVKYNGGVGEKQLQWLDSVLQDASNSNQRVIVCGHVPMSPGVASKAALLWNFDEVMNIIHKYDSVKVCLSGHDHKGGYFVDSHGVHHRSLEAALECPPGTYSFGYIDVYDNKLSLVGTDRMQSTDF 309
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_BOVIN (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Bos taurus OX=9913 GN=ADPRM PE=2 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 4.583e-78 Identity = 128/320 (40.00%), Postives = 192/320 (60.00%), Query Frame = 1 Query: 46 LFSFGLISDVQYADIPDGRSFLG-VPRYYRHSILVLQSAVKEWNTHQKH-KFVVNFGDIVDGFCPK-DQSLNTIKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELL-PLLNIRTLDDRAY-------------YDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPNEDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHF 954 LFSFG+I+D+QYAD+ DG +F G RYYRHS+L LQ A++ WN + + V+ GDI+DG+ + S ++++V++ F+M + P++H GNH YN R L LN + L+D+ Y F P P++RF++LD YD+S +G PK Q+ L LRE NPN + NSP GL E +F+ FNG EQ+ WL+ VL+ + + ++KVV+ HLP++P ++ V L WN+ + + +I + CV AGH H GGYS D +GVHH +E +E P + AFG V VY D++ L G ++ M++ Sbjct: 17 LFSFGVIADIQYADLEDGYNFQGNRRRYYRHSLLHLQGAIEHWNQERSPPRCVLQLGDIIDGYNAQYKASEKSLERVMNTFQMLRVPVHHTWGNHEFYNFSRDYLTNSKLNTKFLEDQIAHHPETVPSEDYYAYHFVPFPKFRFILLDAYDMSVLGVDQSSPKYQQCLKILREHNPNTELNSPQGLR--EPQFVQFNGGFSPEQLNWLNAVLTFSDRNQEKVVIVSHLPIYPEASDSVCLAWNYRDALAVIWSHKCVVCFFAGHTHDGGYSEDPYGVHHVNIEGVIETAPDSQAFGTVHVYPDKMMLEGRGRVPHRIMNY 334
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_XENLA (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Xenopus laevis OX=8355 GN=adprm PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 3.161e-77 Identity = 128/338 (37.87%), Postives = 196/338 (57.99%), Query Frame = 1 Query: 19 LATAQGRPPLFSFGLISDVQYADIPDGRSFLGVP-RYYRHSILVLQSAVKEWNTHQ-KHKFVVNFGDIVDGFCPKDQSLN-TIKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELL-PLLNIRTLDDRA------------------YYDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPNEDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHF-NPK 963 + + + P F+FG+I+D+QYAD + ++L RYYR+S+ L+ A+KEW T K KF++ GDI+DG KD S +++V++E + +H+ GNH YN R L LN R ++R Y FSP P++RF+++DGYD+S IG K + N L+EKNPNED NSP GL E +F++FNG + Q+ W+ +L+ + K E+KV V HLP+HP +A + L+WN+ EV+ ++ + CV LAGHNH+G Y +D G+HH +E PP + AFG + VY+D++ L G ++ +H+ +PK Sbjct: 15 VQSKRMEEPYFTFGIIADIQYADKDNRLNYLKTSMRYYRNSLTQLKVAIKEWATESIKPKFILQLGDIIDGVNTKDNSSTIALERVLEEMDKLPIQFHHVWGNHEFYNFSREYLNGSKLNSRARENRIDQQVGTSESGETNDESFYAYHFSPFPKFRFLLIDGYDLSPIGREKTSLKYDISFNLLKEKNPNEDLNSPTGLE--EEQFVLFNGGISPSQLDWIQSILTSSDKKEEKVFVVSHLPVHPDAADTMCLIWNYPEVLSMLQSHPCVVGYLAGHNHEGRYCMDPSGIHHMTFSGVIETPPESQAFGTMYVYEDKMVLKGRGLVEDRTLHYRDPK 350
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_XENTR (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Xenopus tropicalis OX=8364 GN=adprm PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 7.882e-77 Identity = 129/338 (38.17%), Postives = 200/338 (59.17%), Query Frame = 1 Query: 19 LATAQGRPPLFSFGLISDVQYADIPDGRSFLGVP-RYYRHSILVLQSAVKEWNTHQ-KHKFVVNFGDIVDGFCPKDQSLNT-IKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELL-PLLNIRTLDDRA------------------YYDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPNEDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHF-NPK 963 + + + P F+FG+I+D+QYAD+ + ++L RYYR+S+ L++AV+EW K F++ GDI+DG KD+S T +++V+ E + +H+ GNH YN R L LN + DR Y FSP P++RF+++DGYD+S IG PK ALN L+EKNPNED NSP GL E +F++FNG + Q+ W++ VL+ + + E+ V V HLP+HP +A P+ L+WN+ EV+ ++ + CV LAGHNH+G Y +D +G+HH +E PP + AFG + VY+D++ L G ++ +++ +PK Sbjct: 1 MESKRMEEPYFTFGIIADIQYADMDNRFNYLKTSMRYYRNSLTQLKAAVEEWAMESIKPAFILQLGDIIDGINTKDKSSKTALERVLVEMDKLPIQFHHVWGNHEFYNFSREYLNGSKLNSQARGDRIDRGGGTSENGEFNDESFYAYHFSPCPKFRFLLIDGYDLSPIGREKTSPKYDIALNLLKEKNPNEDLNSPTGLE--EVQFVLFNGGISPSQLDWMERVLTSSDEKEENVFVVSHLPVHPDAADPMCLVWNYPEVLSVLQSHPCVVGYLAGHNHEGRYCMDPYGIHHLTFSGVIETPPESRAFGTMYVYEDKMVLKGRGLVEDRTLYYRDPK 336
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_HUMAN (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Homo sapiens OX=9606 GN=ADPRM PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.678e-75 Identity = 129/331 (38.97%), Postives = 192/331 (58.01%), Query Frame = 1 Query: 13 NGLATAQGRPPLFSFGLISDVQYADIPDGRSFLGVPR-YYRHSILVLQSAVKEWNTHQKHKF-VVNFGDIVDGFCPK-DQSLNTIKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELL-PLLNIRTLDDRAY-------------YDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPNEDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHF 954 N A + LFSFG+I+DVQ+AD+ DG +F G R YYRHS+L LQ A+++WN V+ GDI+DG+ + + S +++ V+D F+ K P++H GNH YN R L LN + L+D+ Y F P P++RF++LD YD+S +G PK ++ + LRE NPN + NSP GL E +F+ FNG +EQ+ WL+ VL+ + ++KVV+ HLP++P ++ V L WN+ + + +I + CV AGH H GGYS D GV+H LE +E P + AFG V VY D++ L G ++ M++ Sbjct: 6 NPEALSDSSERLFSFGVIADVQFADLEDGFNFQGTRRRYYRHSLLHLQGAIEDWNNESSMPCCVLQLGDIIDGYNAQYNASKKSLELVMDMFKRLKVPVHHTWGNHEFYNFSREYLTHSKLNTKFLEDQIVHHPETMPSEDYYAYHFVPFPKFRFILLDAYDLSVLGVDQSSPKYEQCMKILREHNPNTELNSPQGLS--EPQFVQFNGGFSQEQLNWLNEVLTFSDTNQEKVVIVSHLPIYPDASDNVCLAWNYRDALAVIWSHECVVCFFAGHTHDGGYSEDPFGVYHVNLEGVIETAPDSQAFGTVHVYPDKMMLKGRGRVPDRIMNY 334
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_RAT (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Rattus norvegicus OX=10116 GN=Adprm PE=1 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 8.135e-71 Identity = 127/328 (38.72%), Postives = 190/328 (57.93%), Query Frame = 1 Query: 22 ATAQGRPPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILV-LQSAVKEWNTHQKHKF-VVNFGDIVDGFCPKDQ-SLNTIKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELL-PLLNIRTLDDRA-------------YYDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPNEDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHF 954 + A G PLFSFG+I+D+QYAD+ DG +F R Y LV LQ A+++WN V+ GDI+DG+ + + S +++ V++ F+M K P++H GNH YN R L LN + L+D+ Y F P P++RF++LD YD+S +G PK ++ + LRE NPN + NSP GL E +++ FNG +EQ+ WL+ VL+ + ++KVV+ HLP++P ++ V L WN+ + + +I + CV LAGH H GGYS D GVHH LE +E P + AFG V VY D++ L G ++ M++ Sbjct: 9 SPADGPEPLFSFGVIADIQYADLEDGYNFQRSRRRYYRHSLVHLQGAIEDWNKESSMPCCVLQLGDIIDGYNAQYKVSEKSLELVMNTFQMLKVPVHHTWGNHEFYNFSRDYLANSKLNSKFLEDQIPQHPETTPSENYYAYHFVPFPKFRFILLDSYDLSVLGIDQFSPKYEQCMKILREHNPNVELNSPQGLS--EPQYVQFNGGFSQEQLNWLNEVLTFSDANQEKVVIVSHLPIYPEASDSVCLAWNYVDALSIIWSHQCVVCFLAGHTHDGGYSEDPFGVHHVNLEGVIETAPDSQAFGTVHVYPDKMLLKGRGRVPDRIMNY 334
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_MOUSE (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Mus musculus OX=10090 GN=Adprm PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.744e-70 Identity = 125/334 (37.43%), Postives = 193/334 (57.78%), Query Frame = 1 Query: 22 ATAQGRPPLFSFGLISDVQYADIPDGRSFLGVPRYYR-HSILVLQSAVKEWNTHQKHKF-VVNFGDIVDGFCPKDQ-SLNTIKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELLPL-LNIRTLDDRAY-------------YDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPNEDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHFNPKVTL 972 + A PLFSFG+I+D+QYAD+ DG ++ R Y HS++ LQ A+++WN V+ GDI+DG+ + + S +++ V++ F+M K P++H GNH YN R L LN + L+D+ Y F P P++RF++LD YD+S +G PK ++ + LRE NPN + NSP GL E +++ FNG +EQ+ WL+ VL+ + ++KVV+ HLP++P ++ V L WN+ + + +I + CV LAGH H GGYS D GVHH LE +E P + AFG V V+ D++ L G ++ M++ + L Sbjct: 9 SPADASEPLFSFGVIADIQYADLEDGYNYQRSRRRYYRHSLIHLQGAIEDWNKESSMPCCVLQLGDIIDGYNAQYKVSEKSLELVMNTFQMLKVPVHHTWGNHEFYNFSRDYLASSKLNSKFLEDQIAQHPETTPSENYYAYHFVPFPKFRFILLDSYDLSVLGIDPSSPKYEQCMKMLREHNPNVELNSPQGLS--EPQYVQFNGGFSQEQLNWLNEVLTFSDTNQEKVVIVSHLPIYPEASDSVCLAWNYVDALSIIWSHKCVVCFLAGHTHDGGYSEDPFGVHHVNLEGVIETAPDSQAFGTVHVFPDKMLLKGRGRVPDRIMNYKREEAL 340
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Match: ADPRM_DANRE (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Danio rerio OX=7955 GN=adprm PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.214e-61 Identity = 117/320 (36.56%), Postives = 179/320 (55.94%), Query Frame = 1 Query: 43 PLFSFGLISDVQYADIPDGRSFLGVPRYYRH-SILVLQSAVKEWNTHQKHKFVVNFGDIVDGFCPK-DQSLNTIKKVVDEFEMFKGPIYHMIGNHCLYNLPRSELLP-LLNIRTL-----------DDRAYYDFSPVPEYRFVVLDGYDISAIGWPNDHPKTQEALNFLREKNPN-EDKNSPNGLVGIERRFLMFNGAVGKEQMGWLDGVLSEASKLEQKVVVCCHLPLHPGSATPVALLWNFDEVMDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHFN 957 P+F+FGLI+DVQYADI DG ++L R Y S +L+ AV +W ++ + VV GDI+DG + D S + V+ E + ++H+ GNH YN R LL LN DD Y+FSP P +RFV+LD YD+S IG + K + L + N N +D N P VG+E+RF+ FNG ++Q+ WLD VL+ + +++V++ HLP+HP +A P+ L WN + V+ ++ + V +AGH+H GG DS G H LE +E PP + AF +Y+DR+ + G +++ + ++ Sbjct: 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWR-RERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETPPHSHAFATAYLYEDRMVMKGRGRVEDLTITYS 322 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_28916 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 9
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_28916_La_Tanjil_v1.0 ID=rna-TanjilR_28916_La_Tanjil_v1.0; Name=rna-TanjilR_28916; organism=Lupinus angustifolius; type=mRNA; length=975bpback to top protein sequence of rna-TanjilR_28916_La_Tanjil_v1.0 >rna-TanjilR_28916_La_Tanjil_v1.0 ID=rna-TanjilR_28916_La_Tanjil_v1.0; Name=rna-TanjilR_28916_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=324bpback to top mRNA from alignment at Chr_LG15-CM007375.1:5725999..5726973- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_28916_La_Tanjil_v1.0 ID=rna-TanjilR_28916_La_Tanjil_v1.0; Name=rna-TanjilR_28916; organism=Lupinus angustifolius; type=mRNA; length=975bp; location=Sequence derived from: Chr_LG15-CM007375.1:5725999..5726973- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:5725999..5726973- >rna-TanjilR_28916_La_Tanjil_v1.0 ID=rna-TanjilR_28916_La_Tanjil_v1.0; Name=rna-TanjilR_28916; organism=Lupinus angustifolius; type=CDS; length=975bp; location=Sequence derived from: Chr_LG15-CM007375.1:5725999..5726973- (Lupinus angustifoliusback to top |