rna-TanjilR_28918

Transcript Overview
Namerna-TanjilR_28918
Unique Namerna-TanjilR_28918_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length3116
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG15-CM007375.1supercontigChr_LG15-CM007375.1:5753149..5756264 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananR299Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0464Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0394Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR0462Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0324Pisum sativum Cameor genome v1aPisum sativum
anpsR0335Pisum sativum Cameor genome v1aPisum sativum
anpvR0424Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0456Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0375Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0406Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0413Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0424Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0378Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0386Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0386Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0371Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0357Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0425Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0354Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0393Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0400Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0405Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0388Cicer arietinum
anccaR0335Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0343Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0417Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0400Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0408Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0409Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0427Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0427Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anpvfR0437Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0356Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0470Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr09.1001026Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Tiffany.R1.2g072840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigst.02G160500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr09.112Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg52839.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014645134.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.009G171700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_07432Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
LR48_mrnaVigan04g069600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vum_02G01810.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat5g117760.1Pisum sativum Cameor genome v1aPisum sativum
Va04G018980.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_05786.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_012716270.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.2g088640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun09g095900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
XM_058931426.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.02G233300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cr_12588.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat05G0347500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_13313.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun09g095900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_28918gene-TanjilG_28918_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28918rna-TanjilR_28918_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_28918_La_Tanjil_v1.0rna-TanjilR_28918_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28918_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5755883..5756264rna-TanjilR_28918_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5755883..5756264Lupinus angustifoliusCDS
rna-TanjilR_28918_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5754782..5755348rna-TanjilR_28918_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5754782..5755348Lupinus angustifoliusCDS
rna-TanjilR_28918_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5753149..5753879rna-TanjilR_28918_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5753149..5753879Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28918_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5755883..5756264rna-TanjilR_28918_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5755883..5756264Lupinus angustifoliusexon
rna-TanjilR_28918_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5754782..5755348rna-TanjilR_28918_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5754782..5755348Lupinus angustifoliusexon
rna-TanjilR_28918_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5753149..5753879rna-TanjilR_28918_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5753149..5753879Lupinus angustifoliusexon


Homology
[Close]
BLAST of rna-TanjilR_28918 vs. DB:Swiss
Match: GLOX1_ARATH (Aldehyde oxidase GLOX1 OS=Arabidopsis thaliana OX=3702 GN=GLOX1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.077e-43
Identity = 99/235 (42.13%), Postives = 130/235 (55.32%), Query Frame = 3 
Query: 2400 WEMEYMPEPRLVHNMLILPTSHILFINGAKLGCAGYDNAKNASLEPYLYNPYKRLGTRITILESTNIARMYHSSAILLPDGRVLVGGGNPHGRYLFRNVSYPTELRLQAFIPHYMDKRFNSFRPSNLTIESYGGGKSYGIVYGREFEVRFMVGKFVSNNNEVKFSAYAPPFTTHGLSMNQRMLKLRCKRMVQKISGGWVTAVLEAPPSPHVAPAGYYLLTVVNGAIPSMSEWIQF 3104
            W+ E MP  R++ + +ILP   IL INGAK G +G+  AK  +  P LY P K LG R   L  + I R+YHS AI LPDG+VLVGG N +  Y F NV YPTELR++ F P Y+D    + RP  +   +        I YG+ F+V+  + +       V  +  AP FTTH +SMN R+L L     V+ + G        APPS  +AP GYYLL  V   +PS+ EWIQ 
Sbjct:  387 WKTETMPTSRVMSDTVILPNGEILIINGAKRGSSGWHLAKEPNFAPLLYKPNKPLGQRFKELAPSTIPRVYHSIAIALPDGKVLVGGSNTNNGYQF-NVEYPTELRIEKFSPPYLDPALANMRPRIVNTAT-----PKQIKYGQMFDVKIELKQQNVAKENVMVTMLAPSFTTHSVSMNMRLLMLGINN-VKNVGGDNHQIQAVAPPSGKLAPPGYYLLFAVYNGVPSVGEWIQI 614

HSP 2 Score: 118.627 bits (296), Expect = 3.611e-26
Identity = 80/197 (40.61%), Postives = 113/197 (57.36%), Query Frame = 1 
Query:  916 GGYGKGAKRIRYYTPCGKNRQCDWNESKNYLSDERWYASTQTLSNDRAIIVGGRRVFTYEFV-PKMGYGEKSYNLPFLQQTYDKSAKGNNLYPFLHLSSDGNLFIFANRDSILLNPRLNKVIKTFPRIPXXXXXXXXXXXXXVMLPLD---HRDNFQKVEVMVCGGAATGALRNAGKGRFIE-GLRSCGRMVITGIK 1491
            GG+  GA   RY + C     C W E    L+  RWY++  TL +   I+VGGR    YE++ P+    +K Y+   L+QT D   + NNLYPF+ L++DGNLFIFAN  SILL+P+ NKV+K FP++P  G+R+YP S SS +LP+            +V+VCGGA   A   A + +  +  L+ C R+ I   K
Sbjct:  194 GGFQGGANTARYLSTC---ENCVWIEYPKALAARRWYSTQATLPDGTFIVVGGRDALNYEYILPEGQNNKKLYDSQLLRQTDD--PEENNLYPFVWLNTDGNLFIFANNRSILLSPKTNKVLKEFPQLP-GGARNYPGSASSALLPIRLYVQNPAIIPADVLVCGGAKQDAYFRAERLKIYDWALKDCARLNINSAK 384

HSP 3 Score: 65.855 bits (159), Expect = 1.452e-9
Identity = 37/103 (35.92%), Postives = 51/103 (49.51%), Query Frame = 1 
Query:   79 GKWQFLLKNTGVVSMHMALT-YKNTVIMFDEIGAGPSRYPLRKRFGSGRRCTRRAKDLMDSTCFAHSVEYDISANSLRPLRLDTDPWCSSGSFLSNGTILGTG 384
            G+W+  +KN+GV +MH  L    N V  +D      S+     +   G  C           C+AHSV  DI+   ++PL L TD WCSSG    NGT++ TG
Sbjct:   96 GQWELFMKNSGVSAMHAILMPLINKVQFYDATIWRISQI----KLPPGVPCHVFDAKKNKVDCWAHSVLVDINTGDIKPLALTTDTWCSSGGLTVNGTLVSTG 194
[Close]
BLAST of rna-TanjilR_28918 vs. DB:Swiss
Match: GLOX_VITPS (Aldehyde oxidase GLOX OS=Vitis pseudoreticulata OX=231512 GN=GLOX PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 8.874e-40
Identity = 92/235 (39.15%), Postives = 129/235 (54.89%), Query Frame = 3 
Query: 2400 WEMEYMPEPRLVHNMLILPTSHILFINGAKLGCAGYDNAKNASLEPYLYNPYKRLGTRITILESTNIARMYHSSAILLPDGRVLVGGGNPHGRYLFRNVSYPTELRLQAFIPHYMDKRFNSFRPSNLTIESYGGGKSYGIVYGREFEVRFMVGKFVSNNNEVKFSAYAPPFTTHGLSMNQRMLKLRCKRMVQKISGGWVTAVLEAPPSPHVAPAGYYLLTVVNGAIPSMSEWIQF 3104
            WEME MP  R++ +M++LPT  +L INGA+ G  G++ A +    P LY P + LG R   L    + RMYHS+A LLPDGRVL+ G NPH  Y F    +PTELR++AF P Y+     + RP  +  ES        + +G +F+V   V   V  + EV  ++   PF TH  S  QR++KL     V      +   V  APP   +AP GYY++  VN  +PS++ W+Q 
Sbjct:  298 WEMEDMPFGRIMGDMVMLPTGDVLIINGAQAGSQGFELASSPCFFPLLYRPNQPLGLRFMTLTPGTVPRMYHSTANLLPDGRVLIAGSNPHYFYKFA-AEFPTELRIEAFSPEYLFADKANIRP--VIDES-----PEMVRFGEQFDVFVSVSLPVVGSMEVNLASA--PFATHSFSQGQRLVKLTVSPTVPDADERY-RIVCTAPPGGKIAPPGYYMMFAVNLGVPSVARWVQL 521

HSP 2 Score: 112.464 bits (280), Expect = 2.215e-24
Identity = 79/190 (41.58%), Postives = 109/190 (57.37%), Query Frame = 1 
Query:  916 GGYGKGAKRIRYYTPCGKNRQCDWNESKNY-LSDERWYASTQTLSNDRAIIVGGRRVFTYEFVPKMGYGEKSYNLPFLQQTYDKSAKGNNLYPFLHLSSDGNLFIFANRDSILLNPRLNKVIKTFPRIPXXXXXXXXXXXXXVMLPLDHRDNFQKVEVMVCGGAATGALRNAGKGRFIEGLRSCGRMVIT 1482
            GG   G K+IR + PCG +  CDW E K+  L   RWYA+ Q L +   IIVGGR   + E+ P    G  +  LPFL    DK  + +NLYP++HL  +G+LFIFAN  +++ +   NKV+  +P +   G R+YPS+GSSVML L+   ++    ++VCGGA  GA           G  SCGR+V T
Sbjct:  112 GGDLDGVKKIRKFVPCGPHGFCDWEELKDVELETGRWYATNQILPDGSVIIVGGRAANSVEYYPPRKGG--AVQLPFLSDVEDK--QMDNLYPYVHLLPNGHLFIFANNKAVMYDYTSNKVMLEYPPL-DGGPRNYPSAGSSVMLALE--GDYSMAIIVVCGGAQFGAFIQKSTDTPAHG--SCGRIVAT 292

HSP 3 Score: 92.4337 bits (228), Expect = 4.940e-18
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 1 
Query:   58 ISLEGSKGKWQFLLKNTGVVSMHMALTYKNTVIMFDEIGAGPSRYPLRKRFGSGRRCTRRAKD-LMDSTCFAHSVEYDISANSLRPLRLDTDPWCSSGSFLSNGTILGTG 384
            ++L    G W+ ++ N G+ SMH A+T   TV++ D    GPSR  L K       C    KD ++   C+AHSV  D++ N +RPL++ TD WCSSG FL +G++L TG
Sbjct:    8 VALADLPGTWELIVPNAGIASMHTAVTRYGTVVLLDRTNIGPSRKMLPKG-----HCRYDPKDEVLKRDCYAHSVILDLNTNKIRPLKILTDTWCSSGQFLPDGSLLQTG 112
[Close]
BLAST of rna-TanjilR_28918 vs. DB:Swiss
Match: WSCD1_ARTBC (WSC domain-containing protein ARB_07867 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_07867 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 8.613e-29
Identity = 77/238 (32.35%), Postives = 125/238 (52.52%), Query Frame = 3 
Query: 2391 NHKWEMEYMPEPRLVHNMLILPTSHILFINGAKLGCAGYDNAKNASLEPYLYNPYKRLGTRITILESTNIARMYHSSAILLPDGRVLVGGGNPHGRYLFRNVSYPTELRLQAFIPHYMDKRFNSFRPSNLTIESYGGGKSYGIVYGREFEVRFMVGKFVSNNNEVKFSAYAPPFTTHGLSMNQRMLKLRCKRMVQKISGGWVTAVLEAPPSPHVAPAGYYLLTVVNGAIPSMSEWIQF 3104
            N +W +E MP  R++  M  LP    L +NGA+ G AG+  A++ +L   LY+P K +  R++I+ +T IARMYHS AIL+ DGRVLV G +P       +  +P E R++ F+P Y+    +  R    TI +    K +   YG +++++   G    N + +K S      +THG S   R +           S  + T  + APP  H  P G+++L V++G  PS++ +++ 
Sbjct:  692 NAEWVIERMPSKRVLTCMAGLPDGTFLILNGARKGVAGFGLAEDPNLGAVLYDPSKPVNQRMSIMANTTIARMYHSEAILMADGRVLVSGSDPQ------DPRFPQERRVEVFLPPYI---LSGARRPTFTIAN----KDW--AYGGKYKIKITSG----NQSRIKISLMGMVSSTHGNSFGSRTI-------FPAFSCSFGTCTITAPPDSHTCPPGWFMLFVLDGPTPSVASFVRI 903

HSP 2 Score: 63.5438 bits (153), Expect = 9.194e-9
Identity = 51/181 (28.18%), Postives = 81/181 (44.75%), Query Frame = 1 
Query:  907 NLAGGYGKGAKRIRYYTP---CGKNRQCDWNESKN--YLSDERWYASTQTLSNDRAIIVGGRR------VFTYEFVPKMGYGEKSYNLPFLQQTYDKSAKGNNLYPFLHLSSDGNLFIFANRDSILLNPRLNKVIKTFPRIPXXXXXXXXXXX---XXVMLPLDHRDNF-QKVEVMVCGGA 1404
             + G  G   + +R Y P    GK    DW+ES +   L + RWY +  T+SN   ++VGG        V T E +P++G        P L   + K    NNLYP+L     GN+      ++ +L+ R    +KT P IPG  +             M+ L  +  + + + V++CGG+
Sbjct:  500 TVGGWSGISTEGVRLYWPDGSPGKPGVNDWHESPDDLRLQNGRWYPTAMTMSNGSILVVGGEEGSNGAPVPTLEILPRVG--------PVLFMDWLKRTDPNNLYPYLTPLPGGNILAAYYNEARILDERTFDTVKTLPNIPGAVNNDAGGRTYPLEGTMVLLPQKAPYTEPLGVLICGGS 672
[Close]
BLAST of rna-TanjilR_28918 vs. DB:Swiss
Match: GLOX_PHACH (Aldehyde oxidase GLOX OS=Phanerochaete chrysosporium OX=5306 GN=GLX PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.326e-14
Identity = 66/234 (28.21%), Postives = 107/234 (45.73%), Query Frame = 3 
Query: 2385 GNNHKWEMEYMPEPRLVHNMLILPTSHILFINGAKLGCA---------GYDNAKNASLEPYLYNPYKRLGTRITI--LESTNIARMYHSSAILLPDGRVLVGGGNPHGRYL---FRNVSYPTELRLQAFIPHYMDKRFNSFRPSNLTIESYGGGKSYGIVYGREFEVRFMVGKFVSNNNEVKFSAYAPPFTTHGLSMNQRMLKLRCKRMVQKISGGWVTAVLEAPPSPHVAPAG 3044
            G    W++E+M E R++  ++ +P   IL  NGA  G A         G  NA +  L P LY P   LG RI+   + +T I RMYHS+  L   G   +GG NP+  +       + +P+ELR++   P +M   F S RP+ LT+          + +G++  V   +   +   ++V+ +     F++H    + R++      M   IS    +    APP+  V P G
Sbjct:  313 GIKAGWQVEHMLEARMMPELVHVPNGQILITNGAGTGFAALSAVADPVGNSNADHPVLTPSLYTPDAPLGKRISNAGMPTTTIPRMYHSTVTLTQQGNFFIGGNNPNMNFTPPGTPGIKFPSELRIETLDPPFM---FRS-RPALLTMPEK-------LKFGQKVTVPITIPSDL-KASKVQVALMDLGFSSHAFHSSARLV-----FMESSISADRKSLTFTAPPNGRVFPPG 529
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_28918 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
GLOX1_ARATH1.077e-4342.13Aldehyde oxidase GLOX1 OS=Arabidopsis thaliana OX=... [more]
GLOX_VITPS8.874e-4039.15Aldehyde oxidase GLOX OS=Vitis pseudoreticulata OX... [more]
WSCD1_ARTBC8.613e-2932.35WSC domain-containing protein ARB_07867 OS=Arthrod... [more]
GLOX_PHACH5.326e-1428.21Aldehyde oxidase GLOX OS=Phanerochaete chrysospori... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037293Galactose oxidase, central domain superfamilyGENE3D2.130.10.80coord: 24..442
e-value: 1.5E-47
score: 164.6
IPR015202Galactose oxidase-like, Early set domainPFAMPF09118DUF1929coord: 461..555
e-value: 2.0E-20
score: 72.9
IPR015202Galactose oxidase-like, Early set domainCDDcd02851E_set_GO_Ccoord: 440..555
e-value: 2.77411E-25
score: 98.0798
IPR009880Glyoxal oxidase, N-terminalPFAMPF07250Glyoxal_oxid_Ncoord: 41..289
e-value: 2.8E-98
score: 327.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 460..558
e-value: 1.4E-9
score: 39.9
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 460..556
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 94..436

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_28918_La_Tanjil_v1.0 ID=rna-TanjilR_28918_La_Tanjil_v1.0; Name=rna-TanjilR_28918; organism=Lupinus angustifolius; type=mRNA; length=3116bp
ATGATCACTATCTTTTTCTTCTTGCTTTGCCTTGGAGTTAGTGATGGTAC
CAGAGGTATATCCTTAGAAGGAAGCAAAGGGAAGTGGCAATTCCTTCTTA
AAAACACTGGTGTTGTTAGCATGCATATGGCATTAACCTATAAAAACACG
GTCATAATGTTTGATGAAATCGGAGCTGGCCCATCTCGTTACCCACTTAG
AAAGCGCTTCGGTAGTGGAAGAAGGTGCACTAGAAGGGCTAAGGATCTGA
TGGACTCAACATGCTTTGCTCATTCTGTAGAGTATGACATTAGTGCTAAT
AGTCTGAGACCATTGAGGCTTGACACTGATCCTTGGTGTTCTTCCGGTTC
TTTTCTAAGTAATGGGACAATTCTCGGAACAGGTGAATGATTTAAATTAT
GGTCGTAATTATGATCACAGTTGTGGTTATTGTTATTGTGGTCGTTTCAA
TAGGATTGCGGCTAATATAGTGTGAATTATTTATAATTAAAAAAATATTT
TTTAATTTGATGAACATAACCCGAATGATCCTTTGCAACTGTGCGATGAC
CTGATATGATTGTATTATTGTGATTCGGTGTCACCTGTCAAATTTCAGTA
TGATAAGACTGTCACCACAACCACAATTTTAAAGTAGCGTCACGTGATTT
TGTTCAAAATTTGAATTACCGATAGAGACAAATCCAAGGGAAGGCTAGAG
GGGTCGCTTGTGGCCCTCGTATAACAACAACCAAACCTTAGTGATAATAG
GTCGATTGCATAGATTGAAATGAAAATTGAAACTCAATTTTAAAAAACAT
TATATGGCCAATTGTCATGGTCTCATCTTTAATTAAAATTAAGAAAATAT
ATTATACAATAGTATATGATGAATGTTCAGAATCTCCTTCCATGATTTTT
GACCCTAACCTTGCAGGTGGATATGGCAAAGGTGCCAAAAGGATAAGATA
TTATACACCCTGTGGAAAGAATCGCCAATGTGATTGGAACGAATCAAAGA
ATTACTTATCTGATGAGAGGTGGTATGCATCTACTCAAACACTATCCAAT
GATAGGGCAATTATTGTAGGTGGAAGAAGGGTTTTCACATATGAATTTGT
ACCAAAAATGGGTTATGGAGAAAAATCTTATAACCTTCCATTCTTGCAAC
AAACCTATGATAAGAGTGCAAAAGGGAACAATCTTTATCCCTTCCTTCAC
CTTTCATCAGATGGAAACTTGTTCATTTTTGCAAACCGTGATTCCATTCT
TCTAAACCCGAGATTAAACAAAGTGATCAAGACCTTTCCTCGGATTCCAG
GAGATGGATCAAGAAGCTACCCAAGTTCTGGTTCATCTGTAATGCTACCA
TTAGATCACAGAGATAACTTTCAGAAGGTGGAAGTTATGGTGTGTGGAGG
TGCAGCCACTGGAGCACTTAGAAATGCTGGTAAGGGCAGGTTCATTGAAG
GCTTAAGATCTTGTGGGAGAATGGTGATCACAGGTATAAAAAATTATATT
TGCACGTAAAAGTTTTTCCTTCTTATACTTAATTATGAGAAAAATAGTTA
TAGTATAAGATTATAAGTACATCGAAATTTGAAATTGTATTTAAAAAAAA
GAAGAGTTTTAAGTATATGTATATTTTTTCAATTAGCAAAAAGAAAAGTG
ACATATGAATAATTTATATTTTTATGCATGATTAAAAAAGGGATTCCCTA
AAAGATCAATTTGTTAAACCATAGGAAATTAAATAATTGCATTGATTTAT
TGGTATAAGACCTCATTAAATTTATATGTATGTTTGATTTTTTGGAATAT
CACTTATTAAATCCGAAATGAACTAATTCATTAGCTACAAGGGGCCGAGA
TACTTTTGCTTATACACAAAAAAAGCTGTGGACATAAACTAAATGATGAC
CCTCTTTATGCAACTCAAACTATGTTTCAAATTATGTTCTACATCAATGA
TAATAGAGGAGATATCCAATGGTTTGATAGTAAGTGAATCTAAATCATTA
GATATCCTTAAAATTGATAGTTAAGATAATGAGTAAATTTAAAAAACGTA
TTCTTAGAGTAAGTGGATCTTCACTTATGATAATAAAACAAAAATTGAAA
AATAATAAATGTTTAAATTTTTTAATTGATACGTGACTTTGTTACCTCAT
GCACTCCACTTTGCCTTGTTTTATTTTCCTTCACAATCTCGGTGTGGTAT
TCTATGACTTTCCTTGGACAAAAATGACATTCCTGTATCAAAATTTTGTA
TTATTTTTATTCTTCGACTTTATTTGGGAAAAAAGGTGGAGAAATTTTTT
CAAATATGTATTCTTTCATTTACTACTAAAAAAAGAAAGTAACATAAGTA
TGATGTAGATTGACATATATATAATTACTACGCAGGCAACAATCACAAGT
GGGAAATGGAGTACATGCCAGAACCACGTCTTGTACATAACATGTTAATT
CTCCCAACCAGCCACATCCTCTTTATCAATGGAGCTAAACTTGGTTGTGC
AGGATATGACAATGCAAAAAACGCTTCTCTTGAACCTTATCTATATAACC
CTTACAAAAGACTAGGAACAAGGATTACAATCCTTGAATCCACTAACATA
GCTAGAATGTACCACTCATCGGCAATTCTTCTTCCTGATGGAAGGGTCCT
TGTTGGGGGTGGTAACCCTCATGGAAGGTACCTCTTTCGCAATGTGTCAT
ACCCTACAGAGCTAAGACTCCAAGCATTCATTCCACACTACATGGACAAG
AGGTTCAATAGCTTTAGGCCAAGTAACTTGACTATAGAATCATATGGTGG
TGGTAAAAGCTATGGAATTGTGTATGGGAGAGAGTTTGAAGTAAGGTTTA
TGGTAGGGAAGTTTGTTAGCAATAATAATGAGGTAAAGTTTAGTGCTTAT
GCACCACCCTTTACTACACATGGCCTTTCAATGAATCAGAGAATGTTGAA
GCTGAGGTGCAAGAGAATGGTGCAGAAAATTAGTGGTGGGTGGGTAACTG
CAGTGTTAGAAGCTCCACCATCACCTCATGTTGCACCAGCTGGGTATTAT
TTGCTCACTGTTGTGAATGGTGCAATTCCAAGCATGTCTGAGTGGATTCA
GTTTAGAAATGCCTAG
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protein sequence of rna-TanjilR_28918_La_Tanjil_v1.0

>rna-TanjilR_28918_La_Tanjil_v1.0 ID=rna-TanjilR_28918_La_Tanjil_v1.0; Name=rna-TanjilR_28918_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=559bp
MITIFFFLLCLGVSDGTRGISLEGSKGKWQFLLKNTGVVSMHMALTYKNT
VIMFDEIGAGPSRYPLRKRFGSGRRCTRRAKDLMDSTCFAHSVEYDISAN
SLRPLRLDTDPWCSSGSFLSNGTILGTGGYGKGAKRIRYYTPCGKNRQCD
WNESKNYLSDERWYASTQTLSNDRAIIVGGRRVFTYEFVPKMGYGEKSYN
LPFLQQTYDKSAKGNNLYPFLHLSSDGNLFIFANRDSILLNPRLNKVIKT
FPRIPGDGSRSYPSSGSSVMLPLDHRDNFQKVEVMVCGGAATGALRNAGK
GRFIEGLRSCGRMVITGNNHKWEMEYMPEPRLVHNMLILPTSHILFINGA
KLGCAGYDNAKNASLEPYLYNPYKRLGTRITILESTNIARMYHSSAILLP
DGRVLVGGGNPHGRYLFRNVSYPTELRLQAFIPHYMDKRFNSFRPSNLTI
ESYGGGKSYGIVYGREFEVRFMVGKFVSNNNEVKFSAYAPPFTTHGLSMN
QRMLKLRCKRMVQKISGGWVTAVLEAPPSPHVAPAGYYLLTVVNGAIPSM
SEWIQFRNA
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mRNA from alignment at Chr_LG15-CM007375.1:5753149..5756264-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_28918_La_Tanjil_v1.0 ID=rna-TanjilR_28918_La_Tanjil_v1.0; Name=rna-TanjilR_28918; organism=Lupinus angustifolius; type=mRNA; length=3116bp; location=Sequence derived from: Chr_LG15-CM007375.1:5753149..5756264- (Lupinus angustifolius
ATGATCACTATCTTTTTCTTCTTGCTTTGCCTTGGAGTTAGTGATGGTAC
CAGAGGTATATCCTTAGAAGGAAGCAAAGGGAAGTGGCAATTCCTTCTTA
AAAACACTGGTGTTGTTAGCATGCATATGGCATTAACCTATAAAAACACG
GTCATAATGTTTGATGAAATCGGAGCTGGCCCATCTCGTTACCCACTTAG
AAAGCGCTTCGGTAGTGGAAGAAGGTGCACTAGAAGGGCTAAGGATCTGA
TGGACTCAACATGCTTTGCTCATTCTGTAGAGTATGACATTAGTGCTAAT
AGTCTGAGACCATTGAGGCTTGACACTGATCCTTGGTGTTCTTCCGGTTC
TTTTCTAAGTAATGGGACAATTCTCGGAACAGGTGAATGATTTAAATTAT
GGTCGTAATTATGATCACAGTTGTGGTTATTGTTATTGTGGTCGTTTCAA
TAGGATTGCGGCTAATATAGTGTGAATTATTTATAATTAAAAAAATATTT
TTTAATTTGATGAACATAACCCGAATGATCCTTTGCAACTGTGCGATGAC
CTGATATGATTGTATTATTGTGATTCGGTGTCACCTGTCAAATTTCAGTA
TGATAAGACTGTCACCACAACCACAATTTTAAAGTAGCGTCACGTGATTT
TGTTCAAAATTTGAATTACCGATAGAGACAAATCCAAGGGAAGGCTAGAG
GGGTCGCTTGTGGCCCTCGTATAACAACAACCAAACCTTAGTGATAATAG
GTCGATTGCATAGATTGAAATGAAAATTGAAACTCAATTTTAAAAAACAT
TATATGGCCAATTGTCATGGTCTCATCTTTAATTAAAATTAAGAAAATAT
ATTATACAATAGTATATGATGAATGTTCAGAATCTCCTTCCATGATTTTT
GACCCTAACCTTGCAGGTGGATATGGCAAAGGTGCCAAAAGGATAAGATA
TTATACACCCTGTGGAAAGAATCGCCAATGTGATTGGAACGAATCAAAGA
ATTACTTATCTGATGAGAGGTGGTATGCATCTACTCAAACACTATCCAAT
GATAGGGCAATTATTGTAGGTGGAAGAAGGGTTTTCACATATGAATTTGT
ACCAAAAATGGGTTATGGAGAAAAATCTTATAACCTTCCATTCTTGCAAC
AAACCTATGATAAGAGTGCAAAAGGGAACAATCTTTATCCCTTCCTTCAC
CTTTCATCAGATGGAAACTTGTTCATTTTTGCAAACCGTGATTCCATTCT
TCTAAACCCGAGATTAAACAAAGTGATCAAGACCTTTCCTCGGATTCCAG
GAGATGGATCAAGAAGCTACCCAAGTTCTGGTTCATCTGTAATGCTACCA
TTAGATCACAGAGATAACTTTCAGAAGGTGGAAGTTATGGTGTGTGGAGG
TGCAGCCACTGGAGCACTTAGAAATGCTGGTAAGGGCAGGTTCATTGAAG
GCTTAAGATCTTGTGGGAGAATGGTGATCACAGGTATAAAAAATTATATT
TGCACGTAAAAGTTTTTCCTTCTTATACTTAATTATGAGAAAAATAGTTA
TAGTATAAGATTATAAGTACATCGAAATTTGAAATTGTATTTAAAAAAAA
GAAGAGTTTTAAGTATATGTATATTTTTTCAATTAGCAAAAAGAAAAGTG
ACATATGAATAATTTATATTTTTATGCATGATTAAAAAAGGGATTCCCTA
AAAGATCAATTTGTTAAACCATAGGAAATTAAATAATTGCATTGATTTAT
TGGTATAAGACCTCATTAAATTTATATGTATGTTTGATTTTTTGGAATAT
CACTTATTAAATCCGAAATGAACTAATTCATTAGCTACAAGGGGCCGAGA
TACTTTTGCTTATACACAAAAAAAGCTGTGGACATAAACTAAATGATGAC
CCTCTTTATGCAACTCAAACTATGTTTCAAATTATGTTCTACATCAATGA
TAATAGAGGAGATATCCAATGGTTTGATAGTAAGTGAATCTAAATCATTA
GATATCCTTAAAATTGATAGTTAAGATAATGAGTAAATTTAAAAAACGTA
TTCTTAGAGTAAGTGGATCTTCACTTATGATAATAAAACAAAAATTGAAA
AATAATAAATGTTTAAATTTTTTAATTGATACGTGACTTTGTTACCTCAT
GCACTCCACTTTGCCTTGTTTTATTTTCCTTCACAATCTCGGTGTGGTAT
TCTATGACTTTCCTTGGACAAAAATGACATTCCTGTATCAAAATTTTGTA
TTATTTTTATTCTTCGACTTTATTTGGGAAAAAAGGTGGAGAAATTTTTT
CAAATATGTATTCTTTCATTTACTACTAAAAAAAGAAAGTAACATAAGTA
TGATGTAGATTGACATATATATAATTACTACGCAGGCAACAATCACAAGT
GGGAAATGGAGTACATGCCAGAACCACGTCTTGTACATAACATGTTAATT
CTCCCAACCAGCCACATCCTCTTTATCAATGGAGCTAAACTTGGTTGTGC
AGGATATGACAATGCAAAAAACGCTTCTCTTGAACCTTATCTATATAACC
CTTACAAAAGACTAGGAACAAGGATTACAATCCTTGAATCCACTAACATA
GCTAGAATGTACCACTCATCGGCAATTCTTCTTCCTGATGGAAGGGTCCT
TGTTGGGGGTGGTAACCCTCATGGAAGGTACCTCTTTCGCAATGTGTCAT
ACCCTACAGAGCTAAGACTCCAAGCATTCATTCCACACTACATGGACAAG
AGGTTCAATAGCTTTAGGCCAAGTAACTTGACTATAGAATCATATGGTGG
TGGTAAAAGCTATGGAATTGTGTATGGGAGAGAGTTTGAAGTAAGGTTTA
TGGTAGGGAAGTTTGTTAGCAATAATAATGAGGTAAAGTTTAGTGCTTAT
GCACCACCCTTTACTACACATGGCCTTTCAATGAATCAGAGAATGTTGAA
GCTGAGGTGCAAGAGAATGGTGCAGAAAATTAGTGGTGGGTGGGTAACTG
CAGTGTTAGAAGCTCCACCATCACCTCATGTTGCACCAGCTGGGTATTAT
TTGCTCACTGTTGTGAATGGTGCAATTCCAAGCATGTCTGAGTGGATTCA
GTTTAGAAATGCCTAG
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Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:5753149..5756264-

>rna-TanjilR_28918_La_Tanjil_v1.0 ID=rna-TanjilR_28918_La_Tanjil_v1.0; Name=rna-TanjilR_28918; organism=Lupinus angustifolius; type=CDS; length=1680bp; location=Sequence derived from: Chr_LG15-CM007375.1:5753149..5756264- (Lupinus angustifolius
ATGATCACTATCTTTTTCTTCTTGCTTTGCCTTGGAGTTAGTGATGGTAC
CAGAGGTATATCCTTAGAAGGAAGCAAAGGGAAGTGGCAATTCCTTCTTA
AAAACACTGGTGTTGTTAGCATGCATATGGCATTAACCTATAAAAACACG
GTCATAATGTTTGATGAAATCGGAGCTGGCCCATCTCGTTACCCACTTAG
AAAGCGCTTCGGTAGTGGAAGAAGGTGCACTAGAAGGGCTAAGGATCTGA
TGGACTCAACATGCTTTGCTCATTCTGTAGAGTATGACATTAGTGCTAAT
AGTCTGAGACCATTGAGGCTTGACACTGATCCTTGGTGTTCTTCCGGTTC
TTTTCTAAGTAATGGGACAATTCTCGGAACAGGTGGATATGGCAAAGGTG
CCAAAAGGATAAGATATTATACACCCTGTGGAAAGAATCGCCAATGTGAT
TGGAACGAATCAAAGAATTACTTATCTGATGAGAGGTGGTATGCATCTAC
TCAAACACTATCCAATGATAGGGCAATTATTGTAGGTGGAAGAAGGGTTT
TCACATATGAATTTGTACCAAAAATGGGTTATGGAGAAAAATCTTATAAC
CTTCCATTCTTGCAACAAACCTATGATAAGAGTGCAAAAGGGAACAATCT
TTATCCCTTCCTTCACCTTTCATCAGATGGAAACTTGTTCATTTTTGCAA
ACCGTGATTCCATTCTTCTAAACCCGAGATTAAACAAAGTGATCAAGACC
TTTCCTCGGATTCCAGGAGATGGATCAAGAAGCTACCCAAGTTCTGGTTC
ATCTGTAATGCTACCATTAGATCACAGAGATAACTTTCAGAAGGTGGAAG
TTATGGTGTGTGGAGGTGCAGCCACTGGAGCACTTAGAAATGCTGGTAAG
GGCAGGTTCATTGAAGGCTTAAGATCTTGTGGGAGAATGGTGATCACAGG
CAACAATCACAAGTGGGAAATGGAGTACATGCCAGAACCACGTCTTGTAC
ATAACATGTTAATTCTCCCAACCAGCCACATCCTCTTTATCAATGGAGCT
AAACTTGGTTGTGCAGGATATGACAATGCAAAAAACGCTTCTCTTGAACC
TTATCTATATAACCCTTACAAAAGACTAGGAACAAGGATTACAATCCTTG
AATCCACTAACATAGCTAGAATGTACCACTCATCGGCAATTCTTCTTCCT
GATGGAAGGGTCCTTGTTGGGGGTGGTAACCCTCATGGAAGGTACCTCTT
TCGCAATGTGTCATACCCTACAGAGCTAAGACTCCAAGCATTCATTCCAC
ACTACATGGACAAGAGGTTCAATAGCTTTAGGCCAAGTAACTTGACTATA
GAATCATATGGTGGTGGTAAAAGCTATGGAATTGTGTATGGGAGAGAGTT
TGAAGTAAGGTTTATGGTAGGGAAGTTTGTTAGCAATAATAATGAGGTAA
AGTTTAGTGCTTATGCACCACCCTTTACTACACATGGCCTTTCAATGAAT
CAGAGAATGTTGAAGCTGAGGTGCAAGAGAATGGTGCAGAAAATTAGTGG
TGGGTGGGTAACTGCAGTGTTAGAAGCTCCACCATCACCTCATGTTGCAC
CAGCTGGGTATTATTTGCTCACTGTTGTGAATGGTGCAATTCCAAGCATG
TCTGAGTGGATTCAGTTTAGAAATGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR037293Gal_Oxidase_central_sf
IPR015202GO-like_E_set
IPR009880Glyoxal_oxidase_N
IPR013783Ig-like_fold
IPR014756Ig_E-set
IPR011043Gal_Oxase/kelch_b-propeller