rna-TanjilR_28472

Transcript Overview
Namerna-TanjilR_28472
Unique Namerna-TanjilR_28472_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1579
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG15-CM007375.1supercontigChr_LG15-CM007375.1:18423471..18425049 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL142Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL262Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR287Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR288Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR290Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR300Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0415Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0434Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0452Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0370Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0383Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0410Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0420Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0445Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0446Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0477Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0502Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0441Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0464Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0319Pisum sativum Cameor genome v1aPisum sativum
anpsR0330Pisum sativum Cameor genome v1aPisum sativum
anpvR0428Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0433Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0439Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0352Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0357Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0373Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0422Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0462Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0359Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0365Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0375Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0360Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0370Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0361Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0372Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0387Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0324Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0338Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0420Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0354Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0437Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0448Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0330Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0342Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0370Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0386Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0396Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0425Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0364Cicer arietinum
ancarR0383Cicer arietinum
ancarR0400Cicer arietinum
anccaR0336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0349Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0362Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0394Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0414Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0431Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0405Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0401Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0405Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0423Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0413Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0424Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0439Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0439Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR0337Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0433Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0442Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0447Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0453Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0354Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.01G152400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va07G027700.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg55762.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_11782.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun09g186700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.2g197120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
XM_058924734.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_01G02167.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cr_12749.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.10G072700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_14670.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
PvulFLAVERTChr03.1001657Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr08.1160Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.02G083300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_014645291.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun08g111500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_02G00889.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr09.1830Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_11531Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr08.1707Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.2g160120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr03.3035Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr02.1000842Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_004501003.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.009G145800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigan.03G142600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
LR48_mrnaVigan04g201700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.008G184800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_04981Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_13719.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014648671.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_012677Cajanus cajan Asha genome v1.0Cajanus cajan
Va04G059670.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.003G286400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr09.979Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Psat05G0059800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigan.02G108300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun08g111500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.03G096900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va01G065840.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan07g130200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun03g226600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_037359Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun09g186700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigan.01G292000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_03G01081.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_20678Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_12590Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_14953Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_28472gene-TanjilG_28472_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28472rna-TanjilR_28472_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_28472_La_Tanjil_v1.0rna-TanjilR_28472_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28472_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18423471..18424034rna-TanjilR_28472_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18423471..18424034Lupinus angustifoliusexon
rna-TanjilR_28472_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424269..18424427rna-TanjilR_28472_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424269..18424427Lupinus angustifoliusexon
rna-TanjilR_28472_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424540..18424704rna-TanjilR_28472_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424540..18424704Lupinus angustifoliusexon
rna-TanjilR_28472_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424999..18425049rna-TanjilR_28472_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424999..18425049Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28472_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18423471..18424034rna-TanjilR_28472_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18423471..18424034Lupinus angustifoliusCDS
rna-TanjilR_28472_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424269..18424427rna-TanjilR_28472_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424269..18424427Lupinus angustifoliusCDS
rna-TanjilR_28472_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424540..18424704rna-TanjilR_28472_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424540..18424704Lupinus angustifoliusCDS
rna-TanjilR_28472_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424999..18425049rna-TanjilR_28472_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18424999..18425049Lupinus angustifoliusCDS


Homology
[Close]
BLAST of rna-TanjilR_28472 vs. DB:Swiss
Match: BH093_ARATH (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.969e-28
Identity = 39/59 (66.10%), Postives = 51/59 (86.44%), Query Frame = 2 
Query: 1061 SLQFKVER-NLDTKVEICCAGKPSLLLSTVKTLEALGLEIQQCAISCFNDFSMQASCTE 1234
            S +F+++R + DT+V+ICC+ KP LLLSTV TLE LGLEI+QC ISCF+DFS+QASC+E
Sbjct:  265 SPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSE 323

HSP 2 Score: 63.1586 bits (152), Expect = 6.969e-28
Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 1 
Query:  793 SQMDRTSIVGDTIDYMKELLDKINNLQ---QEIDVDAN-----MAGIFKDVKPNEIFIRNSPKVK 963
            S+MDRTSI+GD IDYMKELLDKIN LQ   QE+    N     + G  KD+  NE  +RNSPK +
Sbjct:  205 SKMDRTSILGDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFE 269

HSP 3 Score: 62.7734 bits (151), Expect = 2.286e-9
Identity = 36/40 (90.00%), Postives = 40/40 (100.00%), Query Frame = 1 
Query:  448 RAKKLQGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKV 567
            ++KKL+GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISK+
Sbjct:  168 KSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKM 207
[Close]
BLAST of rna-TanjilR_28472 vs. DB:Swiss
Match: BH061_ARATH (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.400e-25
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 2 
Query: 1061 SLQFKVE-RNLDTKVEICCAGKPSLLLSTVKTLEALGLEIQQCAISCFNDFSMQASCTEV 1237
            SL+F+V+ R ++T ++ICC  KP L++STV TLE LGLEI+QC ISCF+DFS+QASC EV
Sbjct:  229 SLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEV 288

HSP 2 Score: 55.4546 bits (132), Expect = 8.400e-25
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 1 
Query:  793 SQMDRTSIVGDTIDYMKELLDKINNLQ---QEIDVDANMAGIFKDVKPNEIFIRNSPK 957
            ++MDRTSI+GD IDYMKELLDKIN LQ   QE+  +++++ +      NE  +RNS K
Sbjct:  178 TKMDRTSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTLIT----NESMVRNSLK 231

HSP 3 Score: 60.077 bits (144), Expect = 1.656e-8
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 1 
Query:  424 ETSLDRNNRAKKLQGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKV 567
            ET+  R+N  KKL+GQPSKNLMAERRRRKRLNDRLS+LRSIVPKI+K+
Sbjct:  135 ETNKKRSN--KKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKM 180
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_28472 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
BH093_ARATH6.969e-2866.10Transcription factor bHLH93 OS=Arabidopsis thalian... [more]
BH061_ARATH8.400e-2563.33Transcription factor bHLH61 OS=Arabidopsis thalian... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..222
NoneNo IPR availableCDDcd04873ACT_UUR-ACR-likecoord: 250..291
e-value: 0.00285193
score: 33.6757
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 162..211
e-value: 8.7E-11
score: 51.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 162..205
e-value: 2.4E-9
score: 37.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 156..205
score: 15.021
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 163..205
e-value: 6.5076E-4
score: 35.2675
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 147..220
e-value: 9.4E-13
score: 49.9
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 160..218

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_28472_La_Tanjil_v1.0 ID=rna-TanjilR_28472_La_Tanjil_v1.0; Name=rna-TanjilR_28472; organism=Lupinus angustifolius; type=mRNA; length=1579bp
atggAGCTCTATGACCATGATTTCTTGGAGGAGTTAATGGCTCTAAGAAG
AGAAACATGGGACACTATTCCAAACACAGAAGAAAATCAGTTATTCTCTA
ATAGTTATAGTTTTGATCAAAACTCTTTACCTTTTCTCCCAAACAACACT
TCTTGTGGTCAAGAATTTCCTCAAAGTTACAACAATGACTACAACACCTT
CAGTGAAATCTATGGCTCATTACTTGATGAACCATCATATTATAACACAT
TTCATATTCCACATAACACCCCTCCATTTCTTGCTCAAGAAGATTTCCCA
TTGTCCCTGATGGAAGAAGTGGATAATACATGTTTGCTTGGTGAAGAGCT
TCAGAATTTGGAACTGCAAACCACATGCAAAATGGATCCAACACAATCAC
CAGAAAAGCCAGTTTTAAACATGGAAACAAGTCTAGATAGAAATAATCGA
GCAAAGAAGCTCCAAGGGCAACCCTCCAAGAATCTTATGGctgaaaggag
aagaagaaagaggtTAAATGACCGCCTCTCTATGCTAAGGTCAATTGTCC
CTAAGATAAGTAAGGTATGCACCATAACCCTATCATAGAGATtcaataaa
gttttatgttgacTATCGAGTAACTGTGTAACAAAACCTTCACATTTTAT
CCGGGCTTAAGACCGACTATGTATAGTATTAAGCATACATAGGTAGGTTT
AGAGTCATTAATTCAATCGTACTAAAAATTACAGAACTACTATAATTTGT
GTTATATGTAGATctaatttgttttgttaaaaTGCTAATTCATCACAGAT
GGACAGAACATCTATTGTTGGAGACACTATTGATTACATGAAAGAGCTTC
TGGACAAGATCAACAACTTGCAACAAGAAATAGATGTAGATGCAAATATG
GCTGGCATTTTCAAAGATGTAAAGCCAAATGAAATCTTCATTAGAAATTC
TCCTAAGGTGAAAAAAATTCCTAATAGTATCACCTACTAAGCATGTGATT
GAAGGGTAGCATTTGTGATCACTTCATTTCTGCATTGGTTTtgtttttaa
catgtttttgtCTTTGCAGTTTAAGGTGGAGAGGAATTTGGACACCAAGG
TTGAAATTTGCTGTGCTGGGAAGCCAAGCTTGTTGCTTTCTACAGTAAAG
ACCCTTGAAGCATTAGGCTTAGAGATTCAACAATGTGCTATTAGCTGTTT
CAATGATTTCTCAATGCAGGCTTCTTGCACTGAGGTACATCAATTAGTAT
CAGAATCATGCATGTTATTTGTACAATAAAGTCTAacaatttatcttttt
attgtGCAAACTTTACTAATTATTCAAACTCGACTTATAAAAATTTGTCA
AGAATTGATGTGCACAAAACATTTTTCTTAGTATCATTAGTTCTTGATGT
GCACAAAACATTAGTTCTTATTTAGttgcaatttttttattcattcatct
tGCCTTTCTAATAGAAATTGGAGCAAAGGACAATGTTGAGTTCTGAAGAT
ATAAAACAAGTATTATTTAGAAGTGCAGGATATGGAGGAAAGTGTTTgtg
agaaaaagaagaagaaagcatTGCAATAG
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protein sequence of rna-TanjilR_28472_La_Tanjil_v1.0

>rna-TanjilR_28472_La_Tanjil_v1.0 ID=rna-TanjilR_28472_La_Tanjil_v1.0; Name=rna-TanjilR_28472_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=312bp
MELYDHDFLEELMALRRETWDTIPNTEENQLFSNSYSFDQNSLPFLPNNT
SCGQEFPQSYNNDYNTFSEIYGSLLDEPSYYNTFHIPHNTPPFLAQEDFP
LSLMEEVDNTCLLGEELQNLELQTTCKMDPTQSPEKPVLNMETSLDRNNR
AKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSIVGDTID
YMKELLDKINNLQQEIDVDANMAGIFKDVKPNEIFIRNSPKFKVERNLDT
KVEICCAGKPSLLLSTVKTLEALGLEIQQCAISCFNDFSMQASCTEDMEE
SVCEKKKKKALQ
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mRNA from alignment at Chr_LG15-CM007375.1:18423471..18425049+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_28472_La_Tanjil_v1.0 ID=rna-TanjilR_28472_La_Tanjil_v1.0; Name=rna-TanjilR_28472; organism=Lupinus angustifolius; type=mRNA; length=1579bp; location=Sequence derived from: Chr_LG15-CM007375.1:18423471..18425049+ (Lupinus angustifolius
atggAGCTCTATGACCATGATTTCTTGGAGGAGTTAATGGCTCTAAGAAG
AGAAACATGGGACACTATTCCAAACACAGAAGAAAATCAGTTATTCTCTA
ATAGTTATAGTTTTGATCAAAACTCTTTACCTTTTCTCCCAAACAACACT
TCTTGTGGTCAAGAATTTCCTCAAAGTTACAACAATGACTACAACACCTT
CAGTGAAATCTATGGCTCATTACTTGATGAACCATCATATTATAACACAT
TTCATATTCCACATAACACCCCTCCATTTCTTGCTCAAGAAGATTTCCCA
TTGTCCCTGATGGAAGAAGTGGATAATACATGTTTGCTTGGTGAAGAGCT
TCAGAATTTGGAACTGCAAACCACATGCAAAATGGATCCAACACAATCAC
CAGAAAAGCCAGTTTTAAACATGGAAACAAGTCTAGATAGAAATAATCGA
GCAAAGAAGCTCCAAGGGCAACCCTCCAAGAATCTTATGGctgaaaggag
aagaagaaagaggtTAAATGACCGCCTCTCTATGCTAAGGTCAATTGTCC
CTAAGATAAGTAAGGTATGCACCATAACCCTATCATAGAGATtcaataaa
gttttatgttgacTATCGAGTAACTGTGTAACAAAACCTTCACATTTTAT
CCGGGCTTAAGACCGACTATGTATAGTATTAAGCATACATAGGTAGGTTT
AGAGTCATTAATTCAATCGTACTAAAAATTACAGAACTACTATAATTTGT
GTTATATGTAGATctaatttgttttgttaaaaTGCTAATTCATCACAGAT
GGACAGAACATCTATTGTTGGAGACACTATTGATTACATGAAAGAGCTTC
TGGACAAGATCAACAACTTGCAACAAGAAATAGATGTAGATGCAAATATG
GCTGGCATTTTCAAAGATGTAAAGCCAAATGAAATCTTCATTAGAAATTC
TCCTAAGGTGAAAAAAATTCCTAATAGTATCACCTACTAAGCATGTGATT
GAAGGGTAGCATTTGTGATCACTTCATTTCTGCATTGGTTTtgtttttaa
catgtttttgtCTTTGCAGTTTAAGGTGGAGAGGAATTTGGACACCAAGG
TTGAAATTTGCTGTGCTGGGAAGCCAAGCTTGTTGCTTTCTACAGTAAAG
ACCCTTGAAGCATTAGGCTTAGAGATTCAACAATGTGCTATTAGCTGTTT
CAATGATTTCTCAATGCAGGCTTCTTGCACTGAGGTACATCAATTAGTAT
CAGAATCATGCATGTTATTTGTACAATAAAGTCTAacaatttatcttttt
attgtGCAAACTTTACTAATTATTCAAACTCGACTTATAAAAATTTGTCA
AGAATTGATGTGCACAAAACATTTTTCTTAGTATCATTAGTTCTTGATGT
GCACAAAACATTAGTTCTTATTTAGttgcaatttttttattcattcatct
tGCCTTTCTAATAGAAATTGGAGCAAAGGACAATGTTGAGTTCTGAAGAT
ATAAAACAAGTATTATTTAGAAGTGCAGGATATGGAGGAAAGTGTTTgtg
agaaaaagaagaagaaagcatTGCAATAG
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Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:18423471..18425049+

>rna-TanjilR_28472_La_Tanjil_v1.0 ID=rna-TanjilR_28472_La_Tanjil_v1.0; Name=rna-TanjilR_28472; organism=Lupinus angustifolius; type=CDS; length=939bp; location=Sequence derived from: Chr_LG15-CM007375.1:18423471..18425049+ (Lupinus angustifolius
atggAGCTCTATGACCATGATTTCTTGGAGGAGTTAATGGCTCTAAGAAG
AGAAACATGGGACACTATTCCAAACACAGAAGAAAATCAGTTATTCTCTA
ATAGTTATAGTTTTGATCAAAACTCTTTACCTTTTCTCCCAAACAACACT
TCTTGTGGTCAAGAATTTCCTCAAAGTTACAACAATGACTACAACACCTT
CAGTGAAATCTATGGCTCATTACTTGATGAACCATCATATTATAACACAT
TTCATATTCCACATAACACCCCTCCATTTCTTGCTCAAGAAGATTTCCCA
TTGTCCCTGATGGAAGAAGTGGATAATACATGTTTGCTTGGTGAAGAGCT
TCAGAATTTGGAACTGCAAACCACATGCAAAATGGATCCAACACAATCAC
CAGAAAAGCCAGTTTTAAACATGGAAACAAGTCTAGATAGAAATAATCGA
GCAAAGAAGCTCCAAGGGCAACCCTCCAAGAATCTTATGGctgaaaggag
aagaagaaagaggtTAAATGACCGCCTCTCTATGCTAAGGTCAATTGTCC
CTAAGATAAGTAAGATGGACAGAACATCTATTGTTGGAGACACTATTGAT
TACATGAAAGAGCTTCTGGACAAGATCAACAACTTGCAACAAGAAATAGA
TGTAGATGCAAATATGGCTGGCATTTTCAAAGATGTAAAGCCAAATGAAA
TCTTCATTAGAAATTCTCCTAAGTTTAAGGTGGAGAGGAATTTGGACACC
AAGGTTGAAATTTGCTGTGCTGGGAAGCCAAGCTTGTTGCTTTCTACAGT
AAAGACCCTTGAAGCATTAGGCTTAGAGATTCAACAATGTGCTATTAGCT
GTTTCAATGATTTCTCAATGCAGGCTTCTTGCACTGAGGATATGGAGGAA
AGTGTTTgtgagaaaaagaagaagaaagcatTGCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity