rna-TanjilR_24200

Transcript Overview
Namerna-TanjilR_24200
Unique Namerna-TanjilR_24200_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length9625
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG15-CM007375.1supercontigChr_LG15-CM007375.1:18930536..18940160 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL262Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR300Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR308Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0419Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0420Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0431Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0376Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0381Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0383Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0501Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0452Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0459Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0326Pisum sativum Cameor genome v1aPisum sativum
anpsR0330Pisum sativum Cameor genome v1aPisum sativum
anpsR0349Pisum sativum Cameor genome v1aPisum sativum
anpvR0406Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0448Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0363Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0370Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0422Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0447Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0394Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0379Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0389Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0379Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0391Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0357Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0375Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0330Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0332Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0351Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0420Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0436Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0335Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0342Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0396Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0418Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0432Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0368Cicer arietinum
ancarR0383Cicer arietinum
anccaR0336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0357Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0414Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0423Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0437Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0406Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0407Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0416Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0423Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0424Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0432Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0444Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0431Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0444Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anpvfR0420Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0343Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0351Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0463Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Psat06G0095300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun09g196900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
XM_058868762.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_03G01354.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun09g196900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.03G193900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va07G053130.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.3g197960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.02G095700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.model.Chr08.2014Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_14645.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_022780798.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.2g155160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_12074.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.02G073400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr09.1733Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.3g163200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0083600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr09.1000674Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_11272.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_011424Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_08498.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cc_v2.0_06839.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
jg55581.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat6g033680.1Pisum sativum Cameor genome v1aPisum sativum
Vum_02G00785.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058929122.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_23899Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_09791.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_01876Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg35912.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_012715213.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.2g192040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigst.03G122300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va04G061540.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.009G105200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_004501136.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_32944Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_24200gene-TanjilG_24200_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_24200rna-TanjilR_24200_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_24200_La_Tanjil_v1.0rna-TanjilR_24200_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18930536..18930880rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18930536..18930880Lupinus angustifoliusexon
rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18931894..18932065rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18931894..18932065Lupinus angustifoliusexon
rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18932152..18933152rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18932152..18933152Lupinus angustifoliusexon
rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18936563..18936655rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18936563..18936655Lupinus angustifoliusexon
rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18939759..18939905rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18939759..18939905Lupinus angustifoliusexon
rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18940014..18940160rna-TanjilR_24200_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18940014..18940160Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18930536..18930880rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18930536..18930880Lupinus angustifoliusCDS
rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18931894..18932065rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18931894..18932065Lupinus angustifoliusCDS
rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18932152..18933152rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18932152..18933152Lupinus angustifoliusCDS
rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18936563..18936655rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18936563..18936655Lupinus angustifoliusCDS
rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18939759..18939905rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18939759..18939905Lupinus angustifoliusCDS
rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18940014..18940160rna-TanjilR_24200_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18940014..18940160Lupinus angustifoliusCDS


Homology
BLAST of rna-TanjilR_24200 vs. DB:Swiss
Match: ASI1_ARATH (Protein ANTI-SILENCING 1 OS=Arabidopsis thaliana OX=3702 GN=ASI1 PE=4 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.865e-23
Identity = 59/96 (61.46%), Postives = 69/96 (71.88%), Query Frame = 1
Query:   76 DVQFYESFRYDGVDYKRYDSVYFYKEGEP---EPFIGKIIKIWENADKS--KKVKVLWFFRPCEILNFLEGI-ETLENELFLAYGDGLGLANINPL 345
            DVQFYESF YDG +Y+ YD V      EP   EPFIG IIKIWE+A+K   KKVK+LWFF+P EI  +LEG+   L NE+FLA G+GLGLAN N L
Sbjct:   26 DVQFYESFTYDGDEYRLYDCVLVGNASEPDSTEPFIGMIIKIWEHANKHIPKKVKLLWFFKPSEIAPYLEGVPNVLANEVFLASGEGLGLANTNQL 121          

HSP 2 Score: 71.2478 bits (173), Expect = 1.143e-10
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 3
Query: 1359 EAISGKCNVVCIAKDSRNPQVSDEEFQDAEFVFSRFFDVGKRNILDRIDDDKIADIEGT*FLWNKC 1556
            EAI GKC+V+CI+KD RNPQ SDE+F  A+FVF R FDVG   ++D I DDKIA ++   F++N+ 
Sbjct:  122 EAIGGKCSVLCISKDKRNPQPSDEKFNSADFVFCRAFDVGSCKVVDTI-DDKIAGVDVK-FIFNRA 185          

HSP 3 Score: 63.1586 bits (152), Expect = 4.203e-8
Identity = 36/106 (33.96%), Postives = 49/106 (46.23%), Query Frame = 2
Query: 9260 GSPLVGSIGRPCFPEKKPIFYGHHVVDQHRTHMQREMVRYLTFLYIFFAKCFNFYVS*IDGLFSLVCFILFTQKDAVSTSHCSQPNNIEYEMALEWCLLQERGDKA 9577
            G PLV S  +   P K  +F GH  +  H+T  +REM                                    +DAV+TSH SQPNN+E++MA+EWCL Q R ++A
Sbjct:  559 GRPLVASFAKITPPGKPSLFSGH--IKLHKTQTRREM------------------------------------RDAVATSHSSQPNNLEFDMAMEWCLHQARHEQA 626          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_24200 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
ASI1_ARATH5.865e-2361.46Protein ANTI-SILENCING 1 OS=Arabidopsis thaliana O... [more]
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001025Bromo adjacent homology (BAH) domainSMARTSM00439BAH_4coord: 38..164
e-value: 1.1E-5
score: 34.9
IPR001025Bromo adjacent homology (BAH) domainPFAMPF01426BAHcoord: 39..154
e-value: 1.5E-11
score: 44.2
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 38..163
score: 16.358
NoneNo IPR availableGENE3D2.30.30.490coord: 8..176
e-value: 1.4E-31
score: 111.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..480

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_24200_La_Tanjil_v1.0 ID=rna-TanjilR_24200_La_Tanjil_v1.0; Name=rna-TanjilR_24200; organism=Lupinus angustifolius; type=mRNA; length=9625bp
ATGGTAGAAGGAGGTGGTGAAGAAGAACCCGAATTCAAGTGGGGGATAAA
GGGAATGTTAGGTGGTAAAAAGAAGGATGTGCAATTTTATGAATCGTTTC
GATACGATGGTGTTGATTACAAACGTTATGATTCTGTGTATTTTTACAAG
GAAGGTGAACCTGAACCTTTTATTGGAAAAATCATAAAGATATGGGAGAA
TGCTGATAAGTCTAAGAAAGTGAAGGTTTTATGGTTTTTTCGACCTTGCg
agattttgaattttttggaaGGGATTGAGACACTTGAGAATGAGTTGTTC
TTAGCATATGGTGATGGCTTAGGGCTTGCAAATATCAATCCTCTGGTAAC
TAGAACTATCCTTGTTATGATTAGGaagtagtatattttttatacttatg
tTGATTTTGATCAATTAGAATCATGTTGGATGATAGGTGTTGTTTATGTG
TTCCTTTTTAtggtttttaaatttttctaattttgtgttttttggGGGTC
AAAGCTAGATACGATAAGGTTTTATAGAGCTACGGTTACACAATGCTTTT
TGGACAGTGGAAAAAATTGCATGGTCAAGTAATAGATTCCCACTACCCAG
TGTATATTTCCTGGGTTTTTTTGGTGATGATATGATATATAACTATTGAT
GTTAGTTAATATTGCTTGGGATTTTGTACTGTTCTGGTTCATTGTTTTAA
AGATGGTGCTGCTAGTGGCATGAGTGTTATGGTTATCTCAATTCCTTGCA
TGATATACAACAATACCAAGCCTTAATCTCAGTAGGTGAAGTTGGCTACA
TGGGTCGAACGACAccataatactctatcataagTCATGTTCATTGGCAA
AGTATCGATCGCtacatcatttataattgtttcgcctatgatttttcttg
ccCTCTTGTGCGAAGTGTGAATACTTTTttattagaagaagaaaaataag
actTATCAAAGAAGAGAAGAGTAAAAAGGAATAACATAAGATATTCTATT
AGAAAGTTTGAAATGTCAAGCATCGTAAGTGACCTCTTCATGTTGGTGAC
TGAAGTGTGGGAGTTGTTTCTAGAGATGATTTTTGTGATAGGGAAATACG
TGTTAGGTTACTCATGTGCGTTGGTCCAAGTGGAAGGGAATCGGTTCCCC
TTAAGTATGTTCTCTTGGATTTCATCCTTGGCTTCATGTTTATGGAAAAA
CACGGCTCCTAGGAAAAACATGTTTATGGAAAAATGTGTGCCTTTGGTGA
TGAAAACACCATCTAAGtacaaatatgatttttttctacCTATTTTTGCA
CTGACTAGTAAAATATAACTTCAATCAAGTTGGCTTTGTATTTGTTTATT
TGCATCAGGAAGCTATTTCTGGGAAGTGCAATGTTGTTTGTATTGCTAAG
GATAGTAGGAATCCTCAGGTATCAGATGAAGAATTTCAAGATGCTGAATT
TGTATTCTCTCGCTTCTTTGATGTTGGGAAGCGTAATATATTGGATAGGA
TAGATGATGATAAGATTGCTGACATTGAAGGTACGTGATTCTTATggaat
aagtgtaattttgtcTAGTTTTAAATTGTTGAGTATCTTATGGAACTATT
TCTTTAATTGTTgcagttaaaaatatttttaacaatttagATAGTCAAAA
GGCCGTTGGTGTTGTGAAACTTGATTTAGACAAGAAAGAAGGTAGTGGGA
AAGTCAGGACGAGTAATGAAGTTGTGGATCTTCCGAATCAAAAAAATAGC
CAGCCCGTAATGGGAAAGGCGAATGGTAAGGGTTTTGCCACGTTAGTTAG
AGAAAATCTCGTGTCTAAGCCTTCGTCTGGAGAAAAACCAATCTCTCGCA
ATGGTGTAATTGAAGCAAGTAAATCTGGTGACAAGACCATGCCTCAAGCT
AAAGTAAAAGGGAATGGGATTTCTAATGCATCTTTGGTTAAGCAAAAATC
ATCTACTAAACCATCATATGGTTCTAATGACTGTGGAATGAAGAGAATAA
CTAAGTCGAATGATAAACAAGGAAATATCTCTGGTGAGAAGACCCCGTCA
AGGTctaaggttgattcagaaaagggTGAATGCAATGTTGTTGGGGGTCT
TGTTGGGAATATCAACAAGGGATCCACCGAGGCCAATATAGAGAAGGAAA
AATCTAGTAATTCTATTAAAGTCTCTAACGAGAAGTTAAAACGTGACTTG
CAAAATCAGAGACTTGTTTCCAATGATGGTGATATGAACAAAATATCTCC
ATCTCCATCTAAGTCTGATTCAGAAAAGGGTGGATGCAAGGTTGGCAATC
TTGTTCGGAAAATTAACAAGGGATCAATTGATGAAAAGGGGAAGCAAAAA
TGTGGCGATTCTAACTTGCAAAGTCGAAGAATTGTTTCCAATGATGATGC
GAAGAAAGTAGCCACGTCTTCATCAAAAGATAAATACAAGCTTCAACGTG
AAAAGGATTTTTCTGATGGAGAGGATGTTCCTTCAAAGAAGTTAAAGCTT
GACCATAAGCCAATGAGACTATCTGATGATAAATTGCGCAAAAAACCtac
agattctttgaatttggAACAAAAGTTAAATCGATGTGCAAATGATGTTA
CTAGACGACCTGACACTGTAAGTTGCATCACAAGAACCCTCACCTTGCCT
TGatagttcttgttcttttgaCTACCCTACACCTTAATACTCCaacaaat
aaccaaataaacaaGATAAAGATATGTTCAACCTAAAAGCATTTCCTTTG
GCTCATCATGTATTTAAAGCTTGGCTTAAACAATGATCTTGTTGCTCTTG
TATTTCACCTCTACTAAGCCTGATCCACCTCAATGGTTGGGCTAGTCTTA
TTGGCATGACCATTGGGTTTGCTTGTGTTGGGTTGTAATCCTCAGAAACC
AAAAAAGAGAGTATAGATCCATAAAAAATCTAAATGCTTGTGCAATATCA
ACAAAACAAGAAATTAGCATGCCACTAGAGTTATTAGCATTTGGTTTAGT
TACTAAGTTAACCATTCAAAGTTTGGAGATATTCAAATAGGTCCTtgaac
atataaaaaatgtgtactTGAGTTCTTCATGCACACCtttgtttctttca
aatttCCACGAACTTTACTAAAACATATATGGATTTGTTAGAATTCCCCA
AAAGGTTCATGGACCCACCAATGGACAAGTGACATATTGGGATTGAGTGG
GACATATGGGATGGAAAGTGAAGGCAAGTgtttgaacaaaatattttcaa
tttattattttctttgctATATAATACTCCTAGACAATGGAACCTTAACT
TACCCCCTTCCATTCCATTCTATTTCCATTTGCTTCATGCTCCTAACATA
ACATTAAGGTGGAAGCCTCGTACATTAGGCTAcacctttttttaatttta
agtggaTATATCAAACTTATTCATTGTAAATCTTTCGTAATGGTAGTTTC
ATTAACTCACAATTTGGCTAACTTTCCTTGCATTTTTGTTGATTTAAGTT
TCTCTAAATCCAtctatacaataaaaaatacaagaatGAATTTTGATTTG
TTGTCTAAATCTAAAAATGAAATCATTGTATTTTACACACATGATGTAAC
ACAACTTGATGATATCTCTACCTCTATAAGTTTTGGGACGATACCTCTGC
TAGTCCGGACTCTTTTTCTTGTggctatttttatttatttagtttgtGAT
TCCTAAAAACTCCTTATTCAACTTTGGACGATTTGGCTCTTGTGAAGTAA
CTAAGATCTTATGTTGTGCTCATGCTCTATCTACGTCTCTACGCTATTAT
GTGGTGCTTATGGTGGAAAGGAATGCTATAGCTTTAAGGAACcttatttt
acaatattttacTAGGGAGATGGTTTTTTGGCTTCTCTTTGATGTTTTGG
ACATGGCCTCTTTGGTTGTGGGGTATTTTTTGGTAAACAAAAGTTTAGAA
TAGGGGATGCCATTCCCATGTCCAAGGCCAGAGAAGACCACCAACCTAAA
CGAGGATTTATAATGAAATTTGCATATCGCCTACCAACATGGTAATATTT
AGGATTGAACCCAACCAACATAGAATGTTGAGTAGAAGACTTAGCCAGGT
GTGCATGTAAAGAGATTCAAATACTTTGTTGATATGCCTTGACCTCCTAT
CTTTTTAACTTGTTCTTGGATGTGGGATTGTTTTAGCAAATCCAATAGCC
AATGCCACAACACTGGCCTTTTATAGATGGTATTGTCCTTGTTTAAGAGT
CGAGAGAATAAATGTTAAGTTGGAGACATGTAGACAAAGCTTGAAGAGTA
CATAATTTTCAAGTATATGAAATATGAGATTAGAAGGAGGTGTACCGATT
ATATCCTAGAGCTTGAAATTGGTGATTGTAGGATTCAAGTGGGTCATCAT
AAGATGGcgggaaaaaaatataaactataggATTCAAGTGGTGCAAATAA
AATGGGGGAATGAGTTTGTTGTTATTTGTGATAGAGAAGTAGTGCTCATG
TTTAAGGGCACAACTATAACTTGTGATGTTGTATAAGATTGAATGTGGTG
GTAAAACATCAGAAAGAGGATAAAAAGCTCAATGTAGCAAAGATGGAAAT
GTTGCATTAGATGAGTTGACTTAGTAGAAAAGTTAGAATGAGGAACAAAT
GTATACAAAATTAGGGTTACacatattgtagaaaagatgataaaatCTCA
TCTGAGATGGTTAGAGCATACGTGAAGGCCAATACAAGCCTCAGTAAGAA
GAGTAGATGGAGCCACTGTAGGTGAAACCGTTGAGAAGGATTTAGattta
taaatatgatttatgatagggCATCATTTGGTCCATTTAGAAAACCCCAT
CCAAAGGAACATGATTACTCTTGTGAGGATGTCTTATCCTTTGTTTTTGA
ATTATTGTCATCAAAtactatttatattaaaaaagaatacCTAAAAAACT
TTTTTCCAAGTTATGATCTTCATGTTAATTAGGATTTTCACTTTTGTAAA
TTGCTGTTGTTCAGGGCTATGGATTGATTAAAATGAATGGAATATAATTG
CATGATACTAGGTTCTATTGTTTGGATTGTTTACAGTGGGATGGAATGGA
ACCAACTTTTAATTTACTCCATACAGCTCCACTCTATCATAAAGTATCTA
AACATATGATACCTTCGTTTCATTCCATTCCATTGTGTTCTATTCCATCT
GCTCCACCCATTACTAAATATCCATACATAGCTTAAGGAGTTTAGTGTTT
GATGATCTTTTATGTTTCCACTCGTGTCTACTGATTTGTCTACTGCACAT
TGAACTCCTTTGGAGGGTAATTGAATCCATGAAGTTAgagaaattatgaa
aaaatgtgTGCATGCGTTGAGAGAGATGTATGTAGGAAAAATGTAATTCA
GAATACAAATAGTTAGGGTTCTGGCAGTTCTACATACTTTTGGCATGGAA
CATGTTGTATAGATGACTTGGATAGTTGGTTTGTTTGTATGAGTTTTGAA
GAGGATAAAGGAAGGAGGATTATTGAGATTGGCCTCTATAGATTGAGAGT
AACTGAAGAAGTTTTGGGTTATGTATTCTAATTTATCATGCTGTGGGATA
CAATTTTCCATTGCgcttatatatgattttcaaatgATGGTATTTACAGT
GGGGAATCTCATACATTCTAAACTGAAGTCATAGattatataaattgttt
tatttagtaAGTTTAGGCAATTATTGTCctcaaattttattcttaatttc
gGAAGATTTGGTTGACTGCATGCTTATAGTTCTTGAAATCCATTCAGCAG
TTTAGTCTTCTGATGCATTCTGTTTTTTCACCTGATGACAGGATAGAAGC
AGGTGGTTTAAGGGATTTGTAAGTTCTTTTTTCTCTGTTCTACTTTAGCA
AACCTTGATTTAACTTCATGTTTGTTGGTTCCAATGAATTTCGTATCTAA
TATTCATATTGCCTTTTTCTGAAAAGTAAATCAAGACTGACCTATGTATC
AAtggttatattttatttcattttcagcCTTGGGAAGAAAGAATGAAGTC
TGCTTATGAGCAAGGAACACTTGTGTTACTTAAGAACTTGGATCCATCTC
TAACTTCAGGAGAGGTAGAGGTAATGATCATTCTGAATTTCTTGAACCTA
ATAGATTATtcgaatattttgatttttgagtaAAGTAACAACATCCCGTA
AAAGGACTTGCATGCCATTAGTGTGTTTAATCCTGCTGTGGTGTGATTAA
TTCTTTCCTTCTGCACTGGTTAATTCTTGCCTTCAGCGCTTGTAAATTTT
CCTAGATATTGGTTTGGTATATGATATATTTGGATCATACACTGTTTAAT
TTTTCCTAAGGCTTTTAATTTATGTGGTTTCCTGGCCTTATGGTAGGTTT
TTCTGGACTAAGTTTTGAGTAGTTATGTTGTTTCAAATTATAATTGATAA
CCATTTTCTTGCTAAGCTCAAGTCATATAAATTTGCCATAATGTTCATGA
TGTGCTGTCAAATGTTGTTTTCGTCCTGTTTGTTGTTTTTATGGGTTCCA
TCTCCCTCTGTCTCTTTGTTAACCATTTTCTTGTTATTTATTGTCCAAGT
CATATAATTTTGTGTTGAATCATTGCTGATACAGGCTGTTGTGTTTATGA
TGTGCTGTCAACTATTGTTTTTTGTCCAGTTTGTGGTATTTAATATGTTC
TTTCTCTCACATGCACTCCCTTTCACTCATATACTTTACATGTTCTGTAT
TAGAGTATGCTATTTGGCATGCATGACTTTTTAGAaagttgttctctctc
tttCGCTCTCTCGCTCATGTACTTTATATGTTCTTTATCACAGGATATTA
TTTGGAATGGCTTTAATGAAAGTTGCACTGCAAAGATGATCCAGAGAACT
GCATTTTCTAGCCCTCATTCTGGTTAGTACTTGACTCATCTTTTTCCATA
AGCTAGTTAAGAGCAAATACGCATTATTCCCTCATTGGCCCATGAATTGC
AGATGTTTTGaggataatattttaaacacaCCTCATACAACTGACAATGa
attgataatttatttatgatttaggTCAAGCTTTTGTTATATTCAAAAAA
AGGGATGCAGCGGAGTTGGTTGCTAAAAAATTAGACAAGGGGTGTTTCTT
AATGTCAAATGGACGGTATGGACTTAGCCTAACTACATGATAATTGCGTT
GTTAAATTGTATACTTCCTAATATGATTTAATCATCTACGAGACAAATTC
GAAAGACATTTTGTGTCAACTCTCTTTTCCCTTGTTATGGACTCTCACTT
AAGTGTGGATTATTGGAATTGAAATAGGTAAAATGTGGggggagcacatc
ttctgtccTAAAAAGTGTACTACTTCATGTGTCATTCACTTCATcacttg
tgattggttgaaaaaatatataagtcaaaaatttaataattaagtatttt
tccgACCAATTACATGTGGTGGCACAGTTTTTGGGACAGAAGTCATCCCA
AGTCTCTCTCACATTAAACAAGAATGGGCAAGATGAAGACCATATATAAT
GGAAGGATCCACTATCCTGTAATACTTTAAGCCTTTATGGTTTGGATTAA
GATGTAATGTTGTGGCTCTTTGTATGTCCTTTGTGATATATCACCGATGT
TTTGGGCTTCTTGAGAGTTCTAACTTAAATAAGGGGTATCAAATGCAATG
CTTTTGGTTGGTTTGGATTAGTGTTGGTGAAGCAGTGGTGTTATAAATGA
TGGTATGAGTAGGTATCCTAATGAGATGAGGATAAGTGGCTTAGTGAGCG
GTGGAGGGTGGTAAAACAAGTGACACGACTCTTAAAAAATTGATCCAGGT
GATGAGTGGTAACTGTTTAAGACATAACATTGGTGATATCTGACTCTTTT
AATAGTAGGTCTGACGTTCTTAAAAACTCGCAAGTGACTGTGTTCTCCGG
AAAATGAGCTCACCCTTGTGGGGATATTGTTGAGTGAAAGTAGCTTCAAG
TGAAGAAGTCCCTCACATTGGCTTGGAATGGACAAGATGGGGAGCATATA
TTTCTGAATGATGATGAGTTTTGTCTTCTAATTTAACTTAAGTAGGTGTG
AGTGAAGAAGTCTCTCAGATTACCTAATATCTTCTAACACTCCCCACAAG
TTTAAGCTTACCAAAGATTATTATGTTGCAATCCTTTAAATTGAAATGAA
GAATACAGATTTCTAAAACAGAAGAAATAAGTAAGTTTCCCCTTGAATAA
CAGTCTTGGCAACATCCTGGCCATATATCTCCAGTTCTCCATGCTTGTCC
TAAGTAAGTCACAAGCATTTAGACTTCTATTTTAGTCTTCACCTTTGTCT
TCAGTGGCCTCCCAAAGTGGTCTACAAAACATGTAGTCAAGTATTATACC
AATGAAGAGTGACCTCTAACCGGGTCTCTAAGAAGGCCGGATCAGATATC
ATACCAAACAGTACCACTCATGATCGTCCTGTACTAGTGTCCCAGGTCTT
CAATTTGCAATTCCCTCCATTATTCCAAATTACTGAAATTGCAAAGTTAG
TTTAAAGCCTCAAAGGGAGACTAAACATACGCATACCAGTAACAACCCAA
GTCAAAGTTATGAAGAACAATAATCAACCAGAACATCTTTGCATTGACCA
AATTCTGGGCTTCATAGCAATAGCAGCTAAACATGGCAGTGGCACTCGCA
ACCCACCCAAATGTGGTCAGCAATGACAACCCAGCCTCACTTTTCATCCt
caaataggatgaggatccaTAACTGTTAGCCAATGGTTGGAACCGTATAC
TAGATAAGAAAGTAAACAGACTATTCACAACACTCCAAAATTACAATCAG
AAGGGCCTAATGTGCCTGAATTCTGTGCTTATGGTACCACAAATAAAAGG
ATGTAGAAGTTCATTCAAATCCACTAAAAGGAGAATGTAAAATAGACACA
TAGAAGAGGAAAGCACCAAACGCTGTGTGGAAGAGAAAACACTCCAACCT
TTGTGCTTATTAAGCGTGACCTTACTATTTGTGCCAAGATTGTTGTGTGT
TTATACCCTCTTCTGTCTGTAGAATCTTGACATCAGCAACCTTGCTAACG
GGCTAACACTCTAGTGGTTATGTACACAAACTCATTGTACTGGTCAAACA
TGTACTTATTACTTATGTATTAACTTTGCCTGCAAGTGGTTATGTAATTT
GATTGAAGTGTTATCTCTTTAAGCATGTTTCACTGAGAGATTATTATATT
CCATTACCTGGTAGCCCGCTTGTTGGAAGCATTGGACGTCCCTGCTTTCC
AGAAAAGAAGCCAATATTTTATGGTCATCATGTTGTCGATCAACATAGAA
CACATATGCAACGTGAGATGGTGCGGTATCTAACTttcttgtatatattt
tttgccaaatgttttaatttttatgtcaGTTGAATAGATGGTTTATTTTC
ACTTGTTTGCTTTATTTTGTTTACACAGAAAGATGCTGTGTCTACTTCAC
ATTGTTCTCAGCCCAATAATATTGAATATGAGATGGCCTTGGAATGGTGT
TTGCTACAAGAAAGAGGAGACAAAGCATGGAGTAGATTGTTTAAGGTATA
TATTGTCTGTGTAATGTGGCattaa
back to top

protein sequence of rna-TanjilR_24200_La_Tanjil_v1.0

>rna-TanjilR_24200_La_Tanjil_v1.0 ID=rna-TanjilR_24200_La_Tanjil_v1.0; Name=rna-TanjilR_24200_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=634bp
MVEGGGEEEPEFKWGIKGMLGGKKKDVQFYESFRYDGVDYKRYDSVYFYK
EGEPEPFIGKIIKIWENADKSKKVKVLWFFRPCEILNFLEGIETLENELF
LAYGDGLGLANINPLEAISGKCNVVCIAKDSRNPQVSDEEFQDAEFVFSR
FFDVGKRNILDRIDDDKIADIEVKNIFNNLDSQKAVGVVKLDLDKKEGSG
KVRTSNEVVDLPNQKNSQPVMGKANGKGFATLVRENLVSKPSSGEKPISR
NGVIEASKSGDKTMPQAKVKGNGISNASLVKQKSSTKPSYGSNDCGMKRI
TKSNDKQGNISGEKTPSRSKVDSEKGECNVVGGLVGNINKGSTEANIEKE
KSSNSIKVSNEKLKRDLQNQRLVSNDGDMNKISPSPSKSDSEKGGCKVGN
LVRKINKGSIDEKGKQKCGDSNLQSRRIVSNDDAKKVATSSSKDKYKLQR
EKDFSDGEDVPSKKLKLDHKPMRLSDDKLRKKPTDSLNLEQKLNRCANDV
TRRPDTPWEERMKSAYEQGTLVLLKNLDPSLTSGEVEHVSLRDYYIPLPG
SPLVGSIGRPCFPEKKPIFYGHHVVDQHRTHMQREMKDAVSTSHCSQPNN
IEYEMALEWCLLQERGDKAWSRLFKVYIVCVMWH
back to top

mRNA from alignment at Chr_LG15-CM007375.1:18930536..18940160+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_24200_La_Tanjil_v1.0 ID=rna-TanjilR_24200_La_Tanjil_v1.0; Name=rna-TanjilR_24200; organism=Lupinus angustifolius; type=mRNA; length=9625bp; location=Sequence derived from: Chr_LG15-CM007375.1:18930536..18940160+ (Lupinus angustifolius
ATGGTAGAAGGAGGTGGTGAAGAAGAACCCGAATTCAAGTGGGGGATAAA GGGAATGTTAGGTGGTAAAAAGAAGGATGTGCAATTTTATGAATCGTTTC GATACGATGGTGTTGATTACAAACGTTATGATTCTGTGTATTTTTACAAG GAAGGTGAACCTGAACCTTTTATTGGAAAAATCATAAAGATATGGGAGAA TGCTGATAAGTCTAAGAAAGTGAAGGTTTTATGGTTTTTTCGACCTTGCg agattttgaattttttggaaGGGATTGAGACACTTGAGAATGAGTTGTTC TTAGCATATGGTGATGGCTTAGGGCTTGCAAATATCAATCCTCTGGTAAC TAGAACTATCCTTGTTATGATTAGGaagtagtatattttttatacttatg tTGATTTTGATCAATTAGAATCATGTTGGATGATAGGTGTTGTTTATGTG TTCCTTTTTAtggtttttaaatttttctaattttgtgttttttggGGGTC AAAGCTAGATACGATAAGGTTTTATAGAGCTACGGTTACACAATGCTTTT TGGACAGTGGAAAAAATTGCATGGTCAAGTAATAGATTCCCACTACCCAG TGTATATTTCCTGGGTTTTTTTGGTGATGATATGATATATAACTATTGAT GTTAGTTAATATTGCTTGGGATTTTGTACTGTTCTGGTTCATTGTTTTAA AGATGGTGCTGCTAGTGGCATGAGTGTTATGGTTATCTCAATTCCTTGCA TGATATACAACAATACCAAGCCTTAATCTCAGTAGGTGAAGTTGGCTACA TGGGTCGAACGACAccataatactctatcataagTCATGTTCATTGGCAA AGTATCGATCGCtacatcatttataattgtttcgcctatgatttttcttg ccCTCTTGTGCGAAGTGTGAATACTTTTttattagaagaagaaaaataag actTATCAAAGAAGAGAAGAGTAAAAAGGAATAACATAAGATATTCTATT AGAAAGTTTGAAATGTCAAGCATCGTAAGTGACCTCTTCATGTTGGTGAC TGAAGTGTGGGAGTTGTTTCTAGAGATGATTTTTGTGATAGGGAAATACG TGTTAGGTTACTCATGTGCGTTGGTCCAAGTGGAAGGGAATCGGTTCCCC TTAAGTATGTTCTCTTGGATTTCATCCTTGGCTTCATGTTTATGGAAAAA CACGGCTCCTAGGAAAAACATGTTTATGGAAAAATGTGTGCCTTTGGTGA TGAAAACACCATCTAAGtacaaatatgatttttttctacCTATTTTTGCA CTGACTAGTAAAATATAACTTCAATCAAGTTGGCTTTGTATTTGTTTATT TGCATCAGGAAGCTATTTCTGGGAAGTGCAATGTTGTTTGTATTGCTAAG GATAGTAGGAATCCTCAGGTATCAGATGAAGAATTTCAAGATGCTGAATT TGTATTCTCTCGCTTCTTTGATGTTGGGAAGCGTAATATATTGGATAGGA TAGATGATGATAAGATTGCTGACATTGAAGGTACGTGATTCTTATggaat aagtgtaattttgtcTAGTTTTAAATTGTTGAGTATCTTATGGAACTATT TCTTTAATTGTTgcagttaaaaatatttttaacaatttagATAGTCAAAA GGCCGTTGGTGTTGTGAAACTTGATTTAGACAAGAAAGAAGGTAGTGGGA AAGTCAGGACGAGTAATGAAGTTGTGGATCTTCCGAATCAAAAAAATAGC CAGCCCGTAATGGGAAAGGCGAATGGTAAGGGTTTTGCCACGTTAGTTAG AGAAAATCTCGTGTCTAAGCCTTCGTCTGGAGAAAAACCAATCTCTCGCA ATGGTGTAATTGAAGCAAGTAAATCTGGTGACAAGACCATGCCTCAAGCT AAAGTAAAAGGGAATGGGATTTCTAATGCATCTTTGGTTAAGCAAAAATC ATCTACTAAACCATCATATGGTTCTAATGACTGTGGAATGAAGAGAATAA CTAAGTCGAATGATAAACAAGGAAATATCTCTGGTGAGAAGACCCCGTCA AGGTctaaggttgattcagaaaagggTGAATGCAATGTTGTTGGGGGTCT TGTTGGGAATATCAACAAGGGATCCACCGAGGCCAATATAGAGAAGGAAA AATCTAGTAATTCTATTAAAGTCTCTAACGAGAAGTTAAAACGTGACTTG CAAAATCAGAGACTTGTTTCCAATGATGGTGATATGAACAAAATATCTCC ATCTCCATCTAAGTCTGATTCAGAAAAGGGTGGATGCAAGGTTGGCAATC TTGTTCGGAAAATTAACAAGGGATCAATTGATGAAAAGGGGAAGCAAAAA TGTGGCGATTCTAACTTGCAAAGTCGAAGAATTGTTTCCAATGATGATGC GAAGAAAGTAGCCACGTCTTCATCAAAAGATAAATACAAGCTTCAACGTG AAAAGGATTTTTCTGATGGAGAGGATGTTCCTTCAAAGAAGTTAAAGCTT GACCATAAGCCAATGAGACTATCTGATGATAAATTGCGCAAAAAACCtac agattctttgaatttggAACAAAAGTTAAATCGATGTGCAAATGATGTTA CTAGACGACCTGACACTGTAAGTTGCATCACAAGAACCCTCACCTTGCCT TGatagttcttgttcttttgaCTACCCTACACCTTAATACTCCaacaaat aaccaaataaacaaGATAAAGATATGTTCAACCTAAAAGCATTTCCTTTG GCTCATCATGTATTTAAAGCTTGGCTTAAACAATGATCTTGTTGCTCTTG TATTTCACCTCTACTAAGCCTGATCCACCTCAATGGTTGGGCTAGTCTTA TTGGCATGACCATTGGGTTTGCTTGTGTTGGGTTGTAATCCTCAGAAACC AAAAAAGAGAGTATAGATCCATAAAAAATCTAAATGCTTGTGCAATATCA ACAAAACAAGAAATTAGCATGCCACTAGAGTTATTAGCATTTGGTTTAGT TACTAAGTTAACCATTCAAAGTTTGGAGATATTCAAATAGGTCCTtgaac atataaaaaatgtgtactTGAGTTCTTCATGCACACCtttgtttctttca aatttCCACGAACTTTACTAAAACATATATGGATTTGTTAGAATTCCCCA AAAGGTTCATGGACCCACCAATGGACAAGTGACATATTGGGATTGAGTGG GACATATGGGATGGAAAGTGAAGGCAAGTgtttgaacaaaatattttcaa tttattattttctttgctATATAATACTCCTAGACAATGGAACCTTAACT TACCCCCTTCCATTCCATTCTATTTCCATTTGCTTCATGCTCCTAACATA ACATTAAGGTGGAAGCCTCGTACATTAGGCTAcacctttttttaatttta agtggaTATATCAAACTTATTCATTGTAAATCTTTCGTAATGGTAGTTTC ATTAACTCACAATTTGGCTAACTTTCCTTGCATTTTTGTTGATTTAAGTT TCTCTAAATCCAtctatacaataaaaaatacaagaatGAATTTTGATTTG TTGTCTAAATCTAAAAATGAAATCATTGTATTTTACACACATGATGTAAC ACAACTTGATGATATCTCTACCTCTATAAGTTTTGGGACGATACCTCTGC TAGTCCGGACTCTTTTTCTTGTggctatttttatttatttagtttgtGAT TCCTAAAAACTCCTTATTCAACTTTGGACGATTTGGCTCTTGTGAAGTAA CTAAGATCTTATGTTGTGCTCATGCTCTATCTACGTCTCTACGCTATTAT GTGGTGCTTATGGTGGAAAGGAATGCTATAGCTTTAAGGAACcttatttt acaatattttacTAGGGAGATGGTTTTTTGGCTTCTCTTTGATGTTTTGG ACATGGCCTCTTTGGTTGTGGGGTATTTTTTGGTAAACAAAAGTTTAGAA TAGGGGATGCCATTCCCATGTCCAAGGCCAGAGAAGACCACCAACCTAAA CGAGGATTTATAATGAAATTTGCATATCGCCTACCAACATGGTAATATTT AGGATTGAACCCAACCAACATAGAATGTTGAGTAGAAGACTTAGCCAGGT GTGCATGTAAAGAGATTCAAATACTTTGTTGATATGCCTTGACCTCCTAT CTTTTTAACTTGTTCTTGGATGTGGGATTGTTTTAGCAAATCCAATAGCC AATGCCACAACACTGGCCTTTTATAGATGGTATTGTCCTTGTTTAAGAGT CGAGAGAATAAATGTTAAGTTGGAGACATGTAGACAAAGCTTGAAGAGTA CATAATTTTCAAGTATATGAAATATGAGATTAGAAGGAGGTGTACCGATT ATATCCTAGAGCTTGAAATTGGTGATTGTAGGATTCAAGTGGGTCATCAT AAGATGGcgggaaaaaaatataaactataggATTCAAGTGGTGCAAATAA AATGGGGGAATGAGTTTGTTGTTATTTGTGATAGAGAAGTAGTGCTCATG TTTAAGGGCACAACTATAACTTGTGATGTTGTATAAGATTGAATGTGGTG GTAAAACATCAGAAAGAGGATAAAAAGCTCAATGTAGCAAAGATGGAAAT GTTGCATTAGATGAGTTGACTTAGTAGAAAAGTTAGAATGAGGAACAAAT GTATACAAAATTAGGGTTACacatattgtagaaaagatgataaaatCTCA TCTGAGATGGTTAGAGCATACGTGAAGGCCAATACAAGCCTCAGTAAGAA GAGTAGATGGAGCCACTGTAGGTGAAACCGTTGAGAAGGATTTAGattta taaatatgatttatgatagggCATCATTTGGTCCATTTAGAAAACCCCAT CCAAAGGAACATGATTACTCTTGTGAGGATGTCTTATCCTTTGTTTTTGA ATTATTGTCATCAAAtactatttatattaaaaaagaatacCTAAAAAACT TTTTTCCAAGTTATGATCTTCATGTTAATTAGGATTTTCACTTTTGTAAA TTGCTGTTGTTCAGGGCTATGGATTGATTAAAATGAATGGAATATAATTG CATGATACTAGGTTCTATTGTTTGGATTGTTTACAGTGGGATGGAATGGA ACCAACTTTTAATTTACTCCATACAGCTCCACTCTATCATAAAGTATCTA AACATATGATACCTTCGTTTCATTCCATTCCATTGTGTTCTATTCCATCT GCTCCACCCATTACTAAATATCCATACATAGCTTAAGGAGTTTAGTGTTT GATGATCTTTTATGTTTCCACTCGTGTCTACTGATTTGTCTACTGCACAT TGAACTCCTTTGGAGGGTAATTGAATCCATGAAGTTAgagaaattatgaa aaaatgtgTGCATGCGTTGAGAGAGATGTATGTAGGAAAAATGTAATTCA GAATACAAATAGTTAGGGTTCTGGCAGTTCTACATACTTTTGGCATGGAA CATGTTGTATAGATGACTTGGATAGTTGGTTTGTTTGTATGAGTTTTGAA GAGGATAAAGGAAGGAGGATTATTGAGATTGGCCTCTATAGATTGAGAGT AACTGAAGAAGTTTTGGGTTATGTATTCTAATTTATCATGCTGTGGGATA CAATTTTCCATTGCgcttatatatgattttcaaatgATGGTATTTACAGT GGGGAATCTCATACATTCTAAACTGAAGTCATAGattatataaattgttt tatttagtaAGTTTAGGCAATTATTGTCctcaaattttattcttaatttc gGAAGATTTGGTTGACTGCATGCTTATAGTTCTTGAAATCCATTCAGCAG TTTAGTCTTCTGATGCATTCTGTTTTTTCACCTGATGACAGGATAGAAGC AGGTGGTTTAAGGGATTTGTAAGTTCTTTTTTCTCTGTTCTACTTTAGCA AACCTTGATTTAACTTCATGTTTGTTGGTTCCAATGAATTTCGTATCTAA TATTCATATTGCCTTTTTCTGAAAAGTAAATCAAGACTGACCTATGTATC AAtggttatattttatttcattttcagcCTTGGGAAGAAAGAATGAAGTC TGCTTATGAGCAAGGAACACTTGTGTTACTTAAGAACTTGGATCCATCTC TAACTTCAGGAGAGGTAGAGGTAATGATCATTCTGAATTTCTTGAACCTA ATAGATTATtcgaatattttgatttttgagtaAAGTAACAACATCCCGTA AAAGGACTTGCATGCCATTAGTGTGTTTAATCCTGCTGTGGTGTGATTAA TTCTTTCCTTCTGCACTGGTTAATTCTTGCCTTCAGCGCTTGTAAATTTT CCTAGATATTGGTTTGGTATATGATATATTTGGATCATACACTGTTTAAT TTTTCCTAAGGCTTTTAATTTATGTGGTTTCCTGGCCTTATGGTAGGTTT TTCTGGACTAAGTTTTGAGTAGTTATGTTGTTTCAAATTATAATTGATAA CCATTTTCTTGCTAAGCTCAAGTCATATAAATTTGCCATAATGTTCATGA TGTGCTGTCAAATGTTGTTTTCGTCCTGTTTGTTGTTTTTATGGGTTCCA TCTCCCTCTGTCTCTTTGTTAACCATTTTCTTGTTATTTATTGTCCAAGT CATATAATTTTGTGTTGAATCATTGCTGATACAGGCTGTTGTGTTTATGA TGTGCTGTCAACTATTGTTTTTTGTCCAGTTTGTGGTATTTAATATGTTC TTTCTCTCACATGCACTCCCTTTCACTCATATACTTTACATGTTCTGTAT TAGAGTATGCTATTTGGCATGCATGACTTTTTAGAaagttgttctctctc tttCGCTCTCTCGCTCATGTACTTTATATGTTCTTTATCACAGGATATTA TTTGGAATGGCTTTAATGAAAGTTGCACTGCAAAGATGATCCAGAGAACT GCATTTTCTAGCCCTCATTCTGGTTAGTACTTGACTCATCTTTTTCCATA AGCTAGTTAAGAGCAAATACGCATTATTCCCTCATTGGCCCATGAATTGC AGATGTTTTGaggataatattttaaacacaCCTCATACAACTGACAATGa attgataatttatttatgatttaggTCAAGCTTTTGTTATATTCAAAAAA AGGGATGCAGCGGAGTTGGTTGCTAAAAAATTAGACAAGGGGTGTTTCTT AATGTCAAATGGACGGTATGGACTTAGCCTAACTACATGATAATTGCGTT GTTAAATTGTATACTTCCTAATATGATTTAATCATCTACGAGACAAATTC GAAAGACATTTTGTGTCAACTCTCTTTTCCCTTGTTATGGACTCTCACTT AAGTGTGGATTATTGGAATTGAAATAGGTAAAATGTGGggggagcacatc ttctgtccTAAAAAGTGTACTACTTCATGTGTCATTCACTTCATcacttg tgattggttgaaaaaatatataagtcaaaaatttaataattaagtatttt tccgACCAATTACATGTGGTGGCACAGTTTTTGGGACAGAAGTCATCCCA AGTCTCTCTCACATTAAACAAGAATGGGCAAGATGAAGACCATATATAAT GGAAGGATCCACTATCCTGTAATACTTTAAGCCTTTATGGTTTGGATTAA GATGTAATGTTGTGGCTCTTTGTATGTCCTTTGTGATATATCACCGATGT TTTGGGCTTCTTGAGAGTTCTAACTTAAATAAGGGGTATCAAATGCAATG CTTTTGGTTGGTTTGGATTAGTGTTGGTGAAGCAGTGGTGTTATAAATGA TGGTATGAGTAGGTATCCTAATGAGATGAGGATAAGTGGCTTAGTGAGCG GTGGAGGGTGGTAAAACAAGTGACACGACTCTTAAAAAATTGATCCAGGT GATGAGTGGTAACTGTTTAAGACATAACATTGGTGATATCTGACTCTTTT AATAGTAGGTCTGACGTTCTTAAAAACTCGCAAGTGACTGTGTTCTCCGG AAAATGAGCTCACCCTTGTGGGGATATTGTTGAGTGAAAGTAGCTTCAAG TGAAGAAGTCCCTCACATTGGCTTGGAATGGACAAGATGGGGAGCATATA TTTCTGAATGATGATGAGTTTTGTCTTCTAATTTAACTTAAGTAGGTGTG AGTGAAGAAGTCTCTCAGATTACCTAATATCTTCTAACACTCCCCACAAG TTTAAGCTTACCAAAGATTATTATGTTGCAATCCTTTAAATTGAAATGAA GAATACAGATTTCTAAAACAGAAGAAATAAGTAAGTTTCCCCTTGAATAA CAGTCTTGGCAACATCCTGGCCATATATCTCCAGTTCTCCATGCTTGTCC TAAGTAAGTCACAAGCATTTAGACTTCTATTTTAGTCTTCACCTTTGTCT TCAGTGGCCTCCCAAAGTGGTCTACAAAACATGTAGTCAAGTATTATACC AATGAAGAGTGACCTCTAACCGGGTCTCTAAGAAGGCCGGATCAGATATC ATACCAAACAGTACCACTCATGATCGTCCTGTACTAGTGTCCCAGGTCTT CAATTTGCAATTCCCTCCATTATTCCAAATTACTGAAATTGCAAAGTTAG TTTAAAGCCTCAAAGGGAGACTAAACATACGCATACCAGTAACAACCCAA GTCAAAGTTATGAAGAACAATAATCAACCAGAACATCTTTGCATTGACCA AATTCTGGGCTTCATAGCAATAGCAGCTAAACATGGCAGTGGCACTCGCA ACCCACCCAAATGTGGTCAGCAATGACAACCCAGCCTCACTTTTCATCCt caaataggatgaggatccaTAACTGTTAGCCAATGGTTGGAACCGTATAC TAGATAAGAAAGTAAACAGACTATTCACAACACTCCAAAATTACAATCAG AAGGGCCTAATGTGCCTGAATTCTGTGCTTATGGTACCACAAATAAAAGG ATGTAGAAGTTCATTCAAATCCACTAAAAGGAGAATGTAAAATAGACACA TAGAAGAGGAAAGCACCAAACGCTGTGTGGAAGAGAAAACACTCCAACCT TTGTGCTTATTAAGCGTGACCTTACTATTTGTGCCAAGATTGTTGTGTGT TTATACCCTCTTCTGTCTGTAGAATCTTGACATCAGCAACCTTGCTAACG GGCTAACACTCTAGTGGTTATGTACACAAACTCATTGTACTGGTCAAACA TGTACTTATTACTTATGTATTAACTTTGCCTGCAAGTGGTTATGTAATTT GATTGAAGTGTTATCTCTTTAAGCATGTTTCACTGAGAGATTATTATATT CCATTACCTGGTAGCCCGCTTGTTGGAAGCATTGGACGTCCCTGCTTTCC AGAAAAGAAGCCAATATTTTATGGTCATCATGTTGTCGATCAACATAGAA CACATATGCAACGTGAGATGGTGCGGTATCTAACTttcttgtatatattt tttgccaaatgttttaatttttatgtcaGTTGAATAGATGGTTTATTTTC ACTTGTTTGCTTTATTTTGTTTACACAGAAAGATGCTGTGTCTACTTCAC ATTGTTCTCAGCCCAATAATATTGAATATGAGATGGCCTTGGAATGGTGT TTGCTACAAGAAAGAGGAGACAAAGCATGGAGTAGATTGTTTAAGGTATA TATTGTCTGTGTAATGTGGCattaa
back to top

Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:18930536..18940160+

>rna-TanjilR_24200_La_Tanjil_v1.0 ID=rna-TanjilR_24200_La_Tanjil_v1.0; Name=rna-TanjilR_24200; organism=Lupinus angustifolius; type=CDS; length=1905bp; location=Sequence derived from: Chr_LG15-CM007375.1:18930536..18940160+ (Lupinus angustifolius
ATGGTAGAAGGAGGTGGTGAAGAAGAACCCGAATTCAAGTGGGGGATAAA
GGGAATGTTAGGTGGTAAAAAGAAGGATGTGCAATTTTATGAATCGTTTC
GATACGATGGTGTTGATTACAAACGTTATGATTCTGTGTATTTTTACAAG
GAAGGTGAACCTGAACCTTTTATTGGAAAAATCATAAAGATATGGGAGAA
TGCTGATAAGTCTAAGAAAGTGAAGGTTTTATGGTTTTTTCGACCTTGCg
agattttgaattttttggaaGGGATTGAGACACTTGAGAATGAGTTGTTC
TTAGCATATGGTGATGGCTTAGGGCTTGCAAATATCAATCCTCTGGAAGC
TATTTCTGGGAAGTGCAATGTTGTTTGTATTGCTAAGGATAGTAGGAATC
CTCAGGTATCAGATGAAGAATTTCAAGATGCTGAATTTGTATTCTCTCGC
TTCTTTGATGTTGGGAAGCGTAATATATTGGATAGGATAGATGATGATAA
GATTGCTGACATTGAAGttaaaaatatttttaacaatttagATAGTCAAA
AGGCCGTTGGTGTTGTGAAACTTGATTTAGACAAGAAAGAAGGTAGTGGG
AAAGTCAGGACGAGTAATGAAGTTGTGGATCTTCCGAATCAAAAAAATAG
CCAGCCCGTAATGGGAAAGGCGAATGGTAAGGGTTTTGCCACGTTAGTTA
GAGAAAATCTCGTGTCTAAGCCTTCGTCTGGAGAAAAACCAATCTCTCGC
AATGGTGTAATTGAAGCAAGTAAATCTGGTGACAAGACCATGCCTCAAGC
TAAAGTAAAAGGGAATGGGATTTCTAATGCATCTTTGGTTAAGCAAAAAT
CATCTACTAAACCATCATATGGTTCTAATGACTGTGGAATGAAGAGAATA
ACTAAGTCGAATGATAAACAAGGAAATATCTCTGGTGAGAAGACCCCGTC
AAGGTctaaggttgattcagaaaagggTGAATGCAATGTTGTTGGGGGTC
TTGTTGGGAATATCAACAAGGGATCCACCGAGGCCAATATAGAGAAGGAA
AAATCTAGTAATTCTATTAAAGTCTCTAACGAGAAGTTAAAACGTGACTT
GCAAAATCAGAGACTTGTTTCCAATGATGGTGATATGAACAAAATATCTC
CATCTCCATCTAAGTCTGATTCAGAAAAGGGTGGATGCAAGGTTGGCAAT
CTTGTTCGGAAAATTAACAAGGGATCAATTGATGAAAAGGGGAAGCAAAA
ATGTGGCGATTCTAACTTGCAAAGTCGAAGAATTGTTTCCAATGATGATG
CGAAGAAAGTAGCCACGTCTTCATCAAAAGATAAATACAAGCTTCAACGT
GAAAAGGATTTTTCTGATGGAGAGGATGTTCCTTCAAAGAAGTTAAAGCT
TGACCATAAGCCAATGAGACTATCTGATGATAAATTGCGCAAAAAACCta
cagattctttgaatttggAACAAAAGTTAAATCGATGTGCAAATGATGTT
ACTAGACGACCTGACACTcCTTGGGAAGAAAGAATGAAGTCTGCTTATGA
GCAAGGAACACTTGTGTTACTTAAGAACTTGGATCCATCTCTAACTTCAG
GAGAGGTAGAGCATGTTTCACTGAGAGATTATTATATTCCATTACCTGGT
AGCCCGCTTGTTGGAAGCATTGGACGTCCCTGCTTTCCAGAAAAGAAGCC
AATATTTTATGGTCATCATGTTGTCGATCAACATAGAACACATATGCAAC
GTGAGATGAAAGATGCTGTGTCTACTTCACATTGTTCTCAGCCCAATAAT
ATTGAATATGAGATGGCCTTGGAATGGTGTTTGCTACAAGAAAGAGGAGA
CAAAGCATGGAGTAGATTGTTTAAGGTATATATTGTCTGTGTAATGTGGC
attaa
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001025BAH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding