rna-TanjilR_01583
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PP228_ARATH (Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E89 PE=2 SV=1) HSP 1 Score: 733.791 bits (1893), Expect = 0.000e+0 Identity = 353/642 (54.98%), Postives = 458/642 (71.34%), Query Frame = 3 Query: 9477 MYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVH-NMNFF--GKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEM 11393
MY K + A LFD MP+RN++S+NS ISGY++ GFYE+A+ F +AR LD++TYAG LG CG CD+ LG+++HGLV+V+GL+ VF+IN LIDMYSKCG +DQA LF+ D VSWNSLI+GYVR+G + L+ +MH G +T+ LG+VLKACC++ N F G +H Y K G++ D+V TALLDMYAK GSL +AI++F P +N V YNAMI+ FLQM I+ E A LF M+R+GL+ S TFS +LKAC A + E G+QIHA I KN+ QS+EFIG++L+++Y+ GS EDG++CF ST K D+ +WTSMI +VQN QLE+A LF QL + +P+E+ +S +MSACA+ AA SGEQIQ YA+KSG+ T V+ S I MYAKSG++ A F E +NPDV ++S MI S AQHG ANEAL +F+ M GI+PN FLGVL AC HGGL+ +GL+YF MKNDY I N KH C+VDLLGR GRL DA+N I SGF+D PV WRALL +CRV+KD+V+GK VA+R++ELEP A+ SYVLL+NIY+D+G A EVR+LM+DRGVKKEP +SWI +GN+ H+F V D SH SQ+IY+ LE M
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER-DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731 HSP 2 Score: 187.193 bits (474), Expect = 7.222e-47 Identity = 149/548 (27.19%), Postives = 260/548 (47.45%), Query Frame = 3 Query: 9507 AHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVEN---FEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLEN-----ALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRY-FYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVH 11123
A F+ + Q +LV+ + R G + L++ CQ + LD Y + V LGK+ HG +I S LN ++++N+L++MY KC + AR LF+ + +S+NSLI+GY ++G Y EL + + FT L C G++LHG +V +GL V L+DMY+K G L A+ +F R+ V +N++I+ ++++ + L+L +M R GL + + S+LKAC N E G IH K ++ + + T+L+DMY+ GS+++ ++ F+ P +VVT+ +MI+G++Q ++ + A LF + G +P S V+ AC+ G QI + K+ + ++ I +YA G + F T D+ SW+ MI Q+ A LF+ + +S I P T +++AC+ + G + Y +K+ +VK S+ + + ++G + A N +F D + A++ + H
Sbjct: 7 AKTFFNNIAQDSLVTLIT-----KRVGLGYRFLSSLCQPKNTA--LDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFD-RMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA-----AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSS--ISMYAKSGNMPLA-NQVFIEVQNPDVATYSAMISSLAQH 538 HSP 3 Score: 144.05 bits (362), Expect = 4.484e-33 Identity = 110/385 (28.57%), Postives = 186/385 (48.31%), Query Frame = 3 Query: 10008 FGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACA---EMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQ-----HGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLR-YFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTV 11135
GK+ HG+M+K L+ + LL+MY K L A Q+F P RN + +N++I+ + QM + A+ LF + R LK KFT++ L C + ++G+ +H + N L F+ L+DMYS G ++ + F+ + D V+W S+I+GYV+ G E L+L ++ G + + SV+ AC G I Y K G+ +V+ + + MYAK+G L A F + +VV+++ MI Q ++EA +LF M G+EP+ TF VL ACS +E G + + + KN++ ++ + +++L G +D F S + D W +++ C V + +
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFY-----EQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF--QSDEFIGSALIELYALMGSTEDGMQ-CFASTSKQDIASWTSMID-CHVQNEQL 440
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 546.584 bits (1407), Expect = 9.440e-168 Identity = 285/750 (38.00%), Postives = 453/750 (60.40%), Query Frame = 3 Query: 9465 TLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFM---CFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAAR-SGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISFNNEK--LLLDISEAQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHF-KEGFCSCKDYW 11693
+L+ Y K +F +FDEM +RN+V++ + ISGY+R ++ L F + + EG + +T+A LGV G VH +V+ +GL+ + V NSLI++Y KCG + +AR+LF+ + V+WNS+I+GY G + + M L+ S + +V+K C F + LH +VK+G D TAL+ Y+K ++ DA+++F C N V + AMI+ FLQ ++ + A+ LF +M+R+G++ ++FT+S IL A + EV HAQ+ K + + + +GT+L+D Y G +E+ + F+ D+V W++M+AGY Q G+ E A+ +F +L G KP+EF SS+++ CA A+ G+Q +A+KS + V ++ + MYAK G+++SA+ F+ + D+VSW+ MI AQHG A +AL +FK M ++ + +TF+GV AC+H GL+EEG +YF +M D IA +H++C+VDL RAG+L+ A I + IWR +L ACRVHK T +G+ A+++I ++P +A+YVLL N+Y ++G+ + ++VRKLM +R VKKEPG SWIEV NK ++FL D SH + IY +LE++ ++ + + + +L DI + + HSE+LA+ FG+I+ PK +P+ ++KNLRVC DCH +KLI+K+E REI++RD+ RFHHF +G CSC D+W
Sbjct: 133 SLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG--NVVSWTAMISGFLQ-----NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLA--QHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868 HSP 2 Score: 225.328 bits (573), Expect = 1.049e-58 Identity = 157/568 (27.64%), Postives = 277/568 (48.77%), Query Frame = 3 Query: 9504 SAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLF-ETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKL-DVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSH-GGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLL----GRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMG----KHVAKRVIELE 11174
+AHNLFD+ P R+ SY S + G+SR G ++A F G +D ++ VL V +CD G+ +H I G V V SL+D Y K R +F E NV V+W +LI+GY R ++V L MRM G ++FT L + G +H +VK+GLD + +L+++Y K G++ A +F ++ V +N+MI+ + ++ AL +F MR ++ S+ +F+S++K C ++ +Q+H + K ++ I T+L+ YS +M D LR F + +VV+WT+MI+G++QN E A+ LF ++ G +P+EF S +++A + S ++ + +K+ + V + + Y K G ++ A F + D+V+WS M+ AQ G A+++F + GI+PN TF +L C+ + +G ++ + + I + + S C+ L + G ++ A+ +F E D V W +++ H + K + KR ++++
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV--VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY-----AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE-VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595 HSP 3 Score: 193.356 bits (490), Expect = 2.117e-48 Identity = 129/454 (28.41%), Postives = 227/454 (50.00%), Query Frame = 3 Query: 9462 NTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVE-NFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNS-QICMYAKSGDLDSAQLTFQETKNPDVVS-WSVMICSSAQH 10814
N+L+ +Y K G+ A LFD+ +++V++NS ISGY+ G +AL F R+ L E ++A V+ +C + +++ + +H V+ G + +L+ YSKC + A LF+ + VSW ++I+G+++ G + +L M G + FT +L A V + + +H +VK + GTALLD Y K G + +A ++F ++ V ++AM+A + Q + +AA+ +F ++ + G+K ++FTFSSIL C A + GKQ H K+ L S+ + ++L+ MY+ G++E F + D+V+W SMI+GY Q+GQ AL +F ++ K D V +AC GE+ ++ T NS + +Y+++G L+ A + NP + W ++ + H
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ-----TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677 HSP 4 Score: 71.2478 bits (173), Expect = 2.053e-10 Identity = 58/239 (24.27%), Postives = 98/239 (41.00%), Query Frame = 3 Query: 9438 IQPSLFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINS-LIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRN 10151
+ SL + LL MYAK G+ SA +F +++LVS+NS ISGY++ G KAL+ F + + +D T+ GV C V+ G+ +++ NS ++D+YS+ G +++A + E W T+L AC VH G++ ++ + D A L +MYA++G + ++ RN
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR-----------------------------------TILAACRVHKKTELGRLAAEKIIAMKPE-DSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 502.286 bits (1292), Expect = 4.007e-152 Identity = 286/770 (37.14%), Postives = 435/770 (56.49%), Query Frame = 3 Query: 9447 SLFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCIC---DVKLGKVVHGLVIVSG-LNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHG-LDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQ-GLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRK-----------PDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNF--IFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISF--NNEKLLLDISEAQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHFKEGFCSCKDYW 11693
S+ NTL+ +Y K GDF + + +FD + +RN VS+NS IS F +E AL AF E +T V+ C + + +GK VH + G LN F+IN+L+ MY K G + +++L S D V+WN++++ + + E + M L G FT+ +VL AC M GK LH Y +K+G LD + G+AL+DMY + ++F R ++NAMIA + Q +EH + AL LF M GL ++ T + ++ AC+ F + IH + K L + F+ +L+DMYS G ++ +R F D+VTW +MI GYV + E+AL L H++ RK P+ + +++ +CA ++A G++I +YA+K+ +A V ++ + MYAK G L ++ F + +V++W+V+I + HG EA+ L ++M+ G++PN +TF+ V ACSH G+++EGLR FYVMK DYG+ + H AC+VDLLGRAGR+++A + F + W +LLGA R+H + +G+ A+ +I+LEP+ A+ YVLL NIY AG A+EVR+ M+++GV+KEPG SWIE G++VH F+ D SH S+ + LE + ++ K + + +L ++ E + I + HSEKLA+ FGI++ +RV KNLRVC+DCH K ISK+ REIILRD RFH FK G CSC DYW
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLL-GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ-----NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF-NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDE--KEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890 HSP 2 Score: 194.897 bits (494), Expect = 9.169e-49 Identity = 150/533 (28.14%), Postives = 252/533 (47.28%), Query Frame = 3 Query: 9579 RFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLN-GMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMN---FFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKN-DLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQL-LAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLM------IASG-----IEPNHITFLGVLTACSHGGLIEEGLR-YFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVH 11123
R +A+ + V G D Y + +L + D++LGK +H V G V V N+L+++Y KCG +F+ + + VSWNSLI+ + E M S+FTL +V+ AC M GK +H Y ++ G +L+ L+ MY K G L + + F R+ V +N +++ Q +E AL +M +G++ +FT SS+L AC +E GK++HA KN L N F+G++LVDMY + G R F+ + W +MIAGY QN + AL LF + + G + ++ V+ AC A E I + +K G+ VQN+ + MY++ G +D A F + ++ D+V+W+ MI +AL L M ++ G ++PN IT + +L +C+ + +G + Y +KN+ +A +V + +VD+ + G LQ ++ +FD + + + W ++ A +H
Sbjct: 74 RSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFD-RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ-----NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRK-VFDQIPQKNVITWNVIIMAYGMH 596 HSP 3 Score: 75.0998 bits (183), Expect = 1.275e-11 Identity = 56/215 (26.05%), Postives = 100/215 (46.51%), Query Frame = 3 Query: 10479 WTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVA-DVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACI---VDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGA 11111
W ++ V++ L A+ + ++ G KPD + +++ A A++ G+QI ++ K G D V N+ + +Y K GD + F + VSW+ +I S AL F+ M+ +EP+ T + V+TACS+ + EGL + + YG+ +S I V + G+ G+L ++ + G D V W +L +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQV-HAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1) HSP 1 Score: 494.582 bits (1272), Expect = 5.796e-150 Identity = 283/766 (36.95%), Postives = 435/766 (56.79%), Query Frame = 3 Query: 9438 IQPSLFFHNTLLLMYAKLGDFNSAHNLFDEMP---QRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSG-LNGMVFVINSLIDMYSKC--GWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKT---GSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQG-LKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISFNNEKLL----LDISEAQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHFKEGFCSCKDYW 11693
I+P +N+L+ +Y+K GD A ++F+ M +R++VS+++ ++ Y G A+ F + G + ++Y Y V+ C V +G+V G ++ +G V V SLIDM+ K + + ++ + S NV V+W +I +++G + + M LSGF FTL +V AC GK LH + ++ GL DV +L+DMYAK GS+ D ++F + + + A+I +++ +++E A++LF +M QG ++ + FTFSS KAC + + VGKQ+ Q FK L SN + S++ M+ MED R F S + ++V++ + + G +N E A L ++ F +S++S A + + R GEQI S +K G++ V N+ I MY+K G +D+A F +N +V+SW+ MI A+HGFA L F MI G++PN +T++ +L+ACSH GL+ EG R+F M D+ I ++H AC+VDLL RAG L DA FI F+ D ++WR LGACRVH +T +GK A++++EL+P+ A+Y+ L NIY AG + ++E+R+ M++R + KE G SWIEVG+K+H F V D +H + IY L+ ++ +I + + + L L+ + + HSEK+AV FG+IS KS PVRV KNLRVC DCH MK IS V REI+LRD RFHHFK+G CSC DYW
Sbjct: 93 IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV--VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATE----AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850 HSP 2 Score: 194.897 bits (494), Expect = 6.405e-49 Identity = 146/520 (28.08%), Postives = 261/520 (50.19%), Query Frame = 3 Query: 9642 LDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETST--ANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHG-LDLDVVAGTALLDMYAK-TGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMY---SFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLEN-ALSLFHQLLAYGR-KPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLR-YFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKH-VAKRVIE 11168
+D T++ +L C D +LGK+VH +I + + NSLI +YSK G +A +FET D VSW++++A Y G D ++ + G + + + V++AC + G++ G+++K G + DV G +L+DM+ K S +A ++F N V + MI R +QM + A+ F M G +S KFT SS+ AC +EN +GKQ+H+ ++ L + + SLVDMY S GS++D + F+ V++WT++I GY++N L A++LF +++ G +P+ F SS AC ++ R G+Q+ A K G+A + V NS I M+ KS ++ AQ F+ ++VS++ + + ++ +A +L + + + TF +L+ ++ G I +G + + V+K G++ N ++ + + G + D + +F+ + + W +++ T KH A RV+E
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG-----FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK--LGLSCNQPVCNALISMYSKCGSI-DTASRVFNFMENRNVISWTSMI--------TGFAKHGFAIRVLE 561 HSP 3 Score: 122.865 bits (307), Expect = 2.997e-26 Identity = 91/321 (28.35%), Postives = 163/321 (50.78%), Query Frame = 3 Query: 10173 IARFLQMQTISSEHGQAALHLFCQMRRQGLKS-SKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFG---SMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTI-VQNSQICMYAK-SGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRA---GRLQDAQNFIFDSGFEDDPVI-WRALL 11105
+A L ++ +++ + A+ M R G++ TFSS+LK+CI +F +GK +HA++ + D++ + + SL+ +YS G ED K DVV+W++M+A Y NG+ +A+ +F + L G P+++ ++V+ AC+ G + +K+G + + V S I M+ K ++A F + +VV+W++MI Q GF EA+R F M+ SG E + T V +AC+ + G + + G+ +V+ S +VD+ + G + D + +FD ED V+ W AL+
Sbjct: 28 VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG-KQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRK-VFDR-MEDHSVMSWTALI 343
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2) HSP 1 Score: 500.36 bits (1287), Expect = 1.667e-149 Identity = 267/747 (35.74%), Postives = 424/747 (56.76%), Query Frame = 3 Query: 9462 NTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLF-ETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISFNNE--KLLLDISEAQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHFKEGFCSCKDYW 11693
N L+ +Y LG+ SA ++F M QR+ V+YN+ I+G S+ G+ EKA+ F + ++G D T A ++ C + G+ +H G + +L+++Y+KC I+ A F ET NV V WN ++ Y L + F + +M + + + +T ++LK C G+ +H ++K L+ + L+DMYAK G L A I + F ++ V + MIA + Q AL F QM +G++S + ++ + AC ++ + G+QIHAQ + S+ +LV +YS G +E+ F T D + W ++++G+ Q+G E AL +F ++ G + F S + A +E A + G+Q+ + K+G T V N+ I MYAK G + A+ F E + VSW+ +I + ++HGF +EAL F MI S + PNH+T +GVL+ACSH GL+++G+ YF M ++YG++ +H C+VD+L RAG L A+ FI + + D ++WR LL AC VHK+ +G+ A ++ELEP +A+YVLL N+Y + R+ M+++GVKKEPG SWIEV N +H+F V D +H ++ I+ +++ + ++I + + LL ++ Q I + HSEKLA++FG++SLP + P+ VMKNLRVC+DCH +K +SKV REII+RD +RFHHF+ G CSCKDYW
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV--VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN-----FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI--HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064 HSP 2 Score: 276.559 bits (706), Expect = 2.319e-74 Identity = 163/554 (29.42%), Postives = 293/554 (52.89%), Query Frame = 3 Query: 9462 NTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVH 11123
N L+ +Y++ G + A +FD + ++ S+ + ISG S+ +A+ FC V G M Y ++ VL C I +++G+ +HGLV+ G + +V N+L+ +Y G + A +F ++ + D V++N+LI G + G EL RMHL G + TL +++ AC F G+ LH Y K G + ALL++YAK + A+ F+ N V++N M+ + + + + + +F QM+ + + +++T+ SILK CI + + E+G+QIH+QI K + Q N ++ + L+DMY+ G ++ DVV+WT+MIAGY Q + AL+ F Q+L G + DE +++ +SACA + A + G+QI + A SG + QN+ + +Y++ G ++ + L F++T+ D ++W+ ++ Q G EALR+F M GI+ N+ TF + A S +++G + V+ G + + ++ + + G + DA+ + +++ V W A++ A H
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF-SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN-----SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKH 771 HSP 3 Score: 224.942 bits (572), Expect = 9.349e-58 Identity = 152/539 (28.20%), Postives = 251/539 (46.57%), Query Frame = 3 Query: 9492 GDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVC-GCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALL 11105
GD A +FDEMP+R + ++N I + + F + E +E T++GVL C G + + +H ++ GL V N LID+YS+ G++D AR +F+ D SW ++I+G + + L M++ G M + + +VL AC G+ LHG ++K G D AL+ +Y G+L A IF R+ V YN +I Q +G+ A+ LF +M GL+ T +S++ AC A G+Q+HA K SN I +L+++Y+ +E L F T +VV W M+ Y L N+ +F Q+ P+++ S++ C + GEQI S +K+ V + I MYAK G LD+A DVVSW+ MI Q+ F ++AL F+ M+ GI + + ++AC+ ++EG + + G ++++ +V L R G+++++ F+ D + W AL+
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG-----YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALV 664 HSP 4 Score: 168.703 bits (426), Expect = 3.515e-40 Identity = 120/471 (25.48%), Postives = 227/471 (48.20%), Query Frame = 3 Query: 9705 GKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNF-FGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLR-YFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGA 11111
G+ +H ++ GL+ + L D Y G + A +F+ +WN +I +VF L +RM + T VL+AC ++ F + +H ++ GL V L+D+Y++ G + A ++F ++ + AMI+ + +E A+ LFC M G+ + + FSS+L AC +E+ E+G+Q+H + K S+ ++ +LV +Y G++ F++ + D VT+ ++I G Q G E A+ LF ++ G +PD ++S++ AC+ G+Q+ +Y K G A ++ + + +YAK D+++A F ET+ +VV W+VM+ + + R+F+ M I PN T+ +L C G +E G + + ++K ++ + A V + ++D+ + G+L A + + + D V W ++
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTI-FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK-----NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565 HSP 5 Score: 157.147 bits (396), Expect = 1.253e-36 Identity = 125/451 (27.72%), Postives = 211/451 (46.78%), Query Frame = 3 Query: 9441 QPSLFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEH--GQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDM-YSFFGSM--EDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVAD-VTIVQNSQICMYAKSGDLDSAQLTFQETKNPDV 10775
Q + + + L+ MYAKLG ++A ++ +++VS+ + I+GY+++ F +KAL F Q G DE + C + +K G+ +H VSG + + N+L+ +YS+CG I+++ L FE + A D+++WN+L++G+ + G + + +RM+ G + FT G+ +KA GK +H + K G D + AL+ MYAK GS++DA + F+ +N+V +NA+I + S+H G AL F QM ++ + T +L AC + LVD ++F SM E GL +PK + + ++ + G L A ++ KPD + +++SAC GE + L+ D T V S +YA S D+ LT Q+ K V
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG-DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY-------SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI--------------------------GLVDKGIAYFESMNSEYGL-----SPKPE--HYVCVVDMLTRAGLLSRAKEFIQEMPI---KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN--LYAVSKKWDARDLTRQKMKEKGV 926 HSP 6 Score: 110.153 bits (274), Expect = 3.345e-22 Identity = 81/290 (27.93%), Postives = 138/290 (47.59%), Query Frame = 3 Query: 10245 MRRQGLKSSKFTFSSILKACIAVE-NFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAA-RSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLR-YFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALL 11105
+ +G++ + T +L+ C+ + + G+++H+QI K L SN + L D Y F G + + F+ P+ + TW MI + LF ++++ P+E S V+ AC + A EQI + L G+ D T+V N I +Y+++G +D A+ F + D SW MI +++ EA+RLF M GI P F VL+AC +E G + + V+K G +++ +V L G L A++ IF + + D V + L+
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK--LGFSSDTYVCNALVSLYFHLGNLISAEH-IFSNMSQRDAVTYNTLI 361
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1) HSP 1 Score: 483.797 bits (1244), Expect = 1.258e-144 Identity = 274/737 (37.18%), Postives = 405/737 (54.95%), Query Frame = 3 Query: 9492 GDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNF-FGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISFNNEK--LLLDISEAQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHFKEGFCSCKDYW 11693
G S N D ++ N +S Y G Y L F D+ T+ +L + + LG+ VH + + GL+ M+ V NSLI+MY K AR +F+ + D +SWNS+IAG + G + L M++ G +T+ +VLKA K +H + +K D TAL+D Y++ + +A +F + + V +NAM+A + Q S G L LF M +QG +S FT +++ K C + GKQ+HA K+ + ++ + ++DMY G M F+S P D V WT+MI+G ++NG+ E A +F Q+ G PDEF I+++ A + + A G QI + ALK + V S + MYAK G +D A F+ + ++ +W+ M+ AQHG E L+LFK M + GI+P+ +TF+GVL+ACSH GL+ E ++ M DYGI ++H +C+ D LGRAG ++ A+N I E ++R LL ACRV DT GK VA +++ELEP +++YVLL N+Y A R +M+ VKK+PG SWIEV NK+H F+VDD S+ ++LIY ++++M+ I + + E L+D+ E + + +HSEKLAV FG++S P S P+RV+KNLRVC DCH MK I+KV REI+LRD RFH FK+G CSC DYW
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER-DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQ-----SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKER--ALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990 HSP 2 Score: 223.787 bits (569), Expect = 1.083e-57 Identity = 135/388 (34.79%), Postives = 203/388 (52.32%), Query Frame = 3 Query: 9450 LFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICD-VKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACA 10610
L N+L+ MY KL F A +FD M +R+L+S+NS I+G ++ G +A+ F Q G D+YT VL + + + L K VH I FV +LID YS+ + +A +LFE N D V+WN+++AGY + + +L MH G FTL TV K C GK +H Y +K G DLD+ + +LDMY K G ++ A F P +DV + MI+ I + + A H+F QMR G+ +FT +++ KA + E G+QIHA K + ++ F+GTSLVDMY+ GS++D F +++ W +M+ G Q+G+ + L LF Q+ + G KPD+ V+SAC+
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH--NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS-----GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730 HSP 3 Score: 187.193 bits (474), Expect = 5.273e-46 Identity = 158/604 (26.16%), Postives = 260/604 (43.05%), Query Frame = 3 Query: 9444 PSLFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFG--FYEKALNAFCQARV---EGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLK-------------------ACCVHNMNFFGKMLHGY---------------MVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIF-MCFPYRNDVMY---NAMIARFLQMQTIS------------------------SEHGQ--AALHLFCQMRRQGLKSSKFTFSSILKACIAV-ENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDA 11045
P F N L+ MY+K G A +FD+MP R+LVS+NS ++ Y++ E AF R+ + T + +L +C V + HG GL+G FV +L+++Y K G + + ++LFE D V WN ++ Y+ +G + +L H SG + TL + + A V + F K L Y MV+ ++ D V +L K SL Q+ M D+M N++I + +++ +++G A+ LF Q+ R GLK ++T +S+LKA ++ E + KQ+H K + S+ F+ T+L+D YS M++ F D+V W +M+AGY Q+ L LF + G + D+F +++V C + A G+Q+ +YA+KSG V + + MY K GD+ +AQ F PD V+W+ MI ++G A +F M G+ P+ T + A S +E+G R + + +VD+ + G + DA
Sbjct: 72 PERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG-RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672 HSP 4 Score: 137.887 bits (346), Expect = 8.883e-31 Identity = 123/481 (25.57%), Postives = 208/481 (43.24%), Query Frame = 3 Query: 9693 DVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVR-----LGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGL---RYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGA 11111
D+ LGK H ++ N F+IN+LI MYSKCG + AR +F+ + D VSWNS++A Y + + F L + S TL +LK C + + HGY K GLD D AL+++Y K G + + +F PYR+ V++N M+ +L+M + A+ L GL ++ T L A I+ ++ + G Q+ + ND S +++ ++ Y+ +GQ L F ++ + D+ +++ ++ + G+Q+ ALK G+ + V NS I MY K A+ F D++SW+ +I AQ+G EA+ LF ++ G++P+ T VL A S + EGL + +V ++ S ++D R +++A+ F D V W A++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFD-KMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG-----FKEEAIDLSSAFHSSGLNPNEITLR--LLARISGDDSDAG-QVKSFANGNDASSVS-----------------------------EIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMAG 491 HSP 5 Score: 94.3597 bits (233), Expect = 2.043e-17 Identity = 57/204 (27.94%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 10293 LKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQ-----LENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITF 10889
L+ I + +GK HA+I + F+ +L+ MYS GS+ R F+ P D+V+W S++A Y Q+ + ++ A LF L +S ++ C + E YA K G+ V + + +Y K G + ++ F+E DVV W++M+ + + GF EA+ L +SG+ PN IT
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 476.093 bits (1224), Expect = 6.066e-144 Identity = 261/751 (34.75%), Postives = 407/751 (54.19%), Query Frame = 3 Query: 9462 NTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQ-ARVEGFML-DEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGL--NGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEP-HAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISF--NNEKLLLDISEAQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHFKEGFCSCKDYW 11693
NT++ + K GD +SA +LFD MP R +V++ + Y+R +++A F Q R L D T+ +L C VH + G N + V N L+ Y + +D A +LFE D V++N+LI GY + G Y + L ++M SG S FT VLKA + G+ LH V G D G +LD Y+K + + +F P + V YN +I+ + Q ++ +A+LH F +M+ G F F+++L + + ++G+Q+H Q S +G SLVDMY+ E+ F S P+ V+WT++I+GYVQ G L LF ++ + D+ ++V+ A A A+ G+Q+ ++ ++SG + + + MYAK G + A F+E + + VSW+ +I + A +G A+ F MI SG++P+ ++ LGVLTACSH G +E+G YF M YGI KH AC++DLLGR GR +A+ + + FE D ++W ++L ACR+HK+ + + A+++ +E AA+YV + NIY AG + +V+K M++RG+KK P SW+EV +K+H F +D +H I ++ E+ +I + + + ++ D+ E + +HSE+LAV F +IS P+ P+ VMKNLR C DCH +KLISK+ +REI +RDT RFHHF EG CSC DYW
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE-EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ-----ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQM--KIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 214.927 bits (546), Expect = 1.463e-55 Identity = 133/455 (29.23%), Postives = 229/455 (50.33%), Query Frame = 3 Query: 9444 PSLFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICM---YAKSGDLDSAQLTFQETK-NPDVVSWSVMI 10796
P L N LL Y ++ + A LF+E+P+++ V++N+ I+GY + G Y ++++ F + R G ++T++GVL + D LG+ +H L + +G + V N ++D YSK + + R+LF+ +D VS+N +I+ Y + Y M GF F T+L + G+ LH + D + G +L+DMYAK +A IF P R V + A+I+ ++Q HG A L LF +MR L++ + TF+++LKA + + +GKQ+HA I ++ N F G+ LVDMY+ GS++D ++ F P + V+W ++I+ + NG E A+ F +++ G +PD I V++AC+ G + + S + +T + CM ++G A+ E PD + WS ++
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD-EMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ----KGLHG-AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY--FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1) HSP 1 Score: 468.389 bits (1204), Expect = 9.767e-142 Identity = 278/756 (36.77%), Postives = 405/756 (53.57%), Query Frame = 3 Query: 9705 GKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFET------------------------------STANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQ--------------------------AALHLFCQMRRQGLKSS-KFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLR---------------------------------CFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETK-NPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISF--NNEKLLLDISEAQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHFKEGFCSCKDYW 11693
++VH VI SGL V+++N+L+++YSK G+ AR LF+ D VSW ++I GY +G Y+ ++ M G + FTL VL + GK +H ++VK GL +V +LL+MYAK G A +F R+ +NAMIA +Q+ + Q AL +F +M R L S +FT +S+L AC +E +GKQIH+ I + + +L+ MYS G +E R F S DVV WT+MI GY Q+G A++LF ++ G++P+ + +++++S + +A+ G+QI A+KSG V N+ I MYAK+G++ SA F + D VSW+ MI + AQHG A EAL LF+ M+ G+ P+HIT++GV +AC+H GL+ +G +YF +MK+ I + H AC+VDL GRAG LQ+AQ FI E D V W +LL ACRVHK+ +GK A+R++ LEP + +Y L N+Y G + A+++RK M+D VKKE G SWIEV +KVH F V+D +H IY ++++ +I K+ + + +L D+ E ++ I + HHSEKLA+ FG+IS P +R+MKNLRVC+DCHT +K ISK+ REII+RDT RFHHFK+GFCSC+DYW
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEE-EVKEQI-LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786 HSP 2 Score: 189.504 bits (480), Expect = 1.634e-47 Identity = 150/528 (28.41%), Postives = 228/528 (43.18%), Query Frame = 3 Query: 9453 FFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFE------------------------------TSTANVDDVSWNSLIAGYVRLGGYN----DVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGL---------------------------------DLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQ--AALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTP-KLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICM---YAKSGDLDSAQLTFQETK-NPDVVSWSVMICSSAQH 10814
F NT+L Y+K GD +S FD++PQR+ VS+ + I GY G Y KA+ EG ++T VL ++ GK VH ++ GL G V V NSL++MY+KCG A+ +F+ A D V+WNS+I+G+ + GY+ D+F ++R L FTL +VL AC GK +H ++V G DL + TALLD Y K G + A IF+ R+ V + AMI + Q HG A++LF M G + + +T +++L ++ + GKQIH K+ + + +L+ MY+ G++ R F+ + D V+WTSMI Q+G E AL LF +L G +PD V SAC G Q + + V + + CM + ++G L AQ ++ PDVV+W ++ + H
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR-GYDLRALDIFSKMLRDSL--LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ-------HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 468.774 bits (1205), Expect = 1.187e-141 Identity = 265/752 (35.24%), Postives = 414/752 (55.05%), Query Frame = 3 Query: 9453 FFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISFNNEKLLL-----DISEAQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHFKEGFCSCKDYW 11693
FF L+ ++ + G + A +F+ + + V Y++ + G+++ +KAL F + R + Y + +L VCG ++++GK +HGL++ SG + +F + L +MY+KC +++AR +F+ D VSWN+++AGY + G E+V M S T+ +VL A + GK +HGY ++ G D V TAL+DMYAK GSL A Q+F RN V +N+MI ++Q +E+ + A+ +F +M +G+K + + L AC + + E G+ IH + L N + SL+ MY ++ F +V+W +MI G+ QNG+ +AL+ F Q+ + KPD F SV++A AE++ + I ++S + V + + MYAK G + A+L F V +W+ MI HGF AL LF+ M I+PN +TFL V++ACSH GL+E GL+ FY+MK +Y I ++ H +VDLLGRAGRL +A +FI + ++ A+LGAC++HK+ + A+R+ EL P +VLL NIY A + +VR M +G++K PG S +E+ N+VH+F +H S+ IY+ LE+++ I + + + L+ D+ E LS HSEKLA++FG+++ + V KNLRVC+DCH K IS V REI++RD RFHHFK G CSC DYW
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER-DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ-----NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLST------HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809 HSP 2 Score: 201.445 bits (511), Expect = 2.872e-51 Identity = 134/469 (28.57%), Postives = 234/469 (49.89%), Query Frame = 3 Query: 9723 LVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQA--ALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVH 11123
LV +GL F L+ ++ + G +D+A +FE + + +V +++++ G+ ++ + + +RM + +LK C GK +HG +VK G LD+ A T L +MYAK + +A ++F P R+ V +N ++A + S++G A AL + M + LK S T S+L A A+ VGK+IH ++ S I T+LVDMY+ GS+E + F+ + +VV+W SMI YVQN + A+ +F ++L G KP + + + ACA++ G I +++ G+ V NS I MY K ++D+A F + ++ +VSW+ MI AQ+G +AL F M + ++P+ T++ V+TA + + ++ + + + NV + +VD+ + G + A+ IFD E W A++ H
Sbjct: 59 LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL-NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY-------SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGYGTH 517 HSP 3 Score: 188.348 bits (477), Expect = 6.126e-47 Identity = 143/476 (30.04%), Postives = 227/476 (47.69%), Query Frame = 3 Query: 9450 LFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQARVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQA--ALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQN--SQICMYAKSGDLDSA-QLTFQETKNPDVVSWSVMICSSAQH---GFANEAL-RLFKL 10850
LF L MYAK N A +FD MP+R+LVS+N+ ++GYS+ G AL E T VL + + +GK +HG + SG + +V + +L+DMY+KCG ++ AR LF+ + VSWNS+I YV+ + + +M G + ++ L AC G+ +H V+ GLD +V +L+ MY K + A +F R V +NAMI F Q +G+ AL+ F QMR + +K FT+ S++ A + K IH + ++ L N F+ T+LVDMY+ G++ F+ + V TW +MI GY +G + AL LF ++ KP+ SV+SAC+ +G + Y +K + + + + + + ++G L+ A Q P V + M+ + H FA +A RLF+L
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD-GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ-------NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC-FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636 HSP 4 Score: 115.161 bits (287), Expect = 6.672e-24 Identity = 79/317 (24.92%), Postives = 149/317 (47.00%), Query Frame = 3 Query: 10170 MIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSS--ILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLR-YFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGA 11111
M ++ +Q T+ + H R + ++ + + +L+ C +++ +QI +FKN L F T LV ++ +GS+++ R F V + +M+ G+ + L+ AL F ++ +P + + ++ C + A R G++I +KSG + MYAK ++ A+ F D+VSW+ ++ +Q+G A AL + K M ++P+ IT + VL A S LI G + Y M++ + N+ S +VD+ + G L+ A+ +FD E + V W +++ A
Sbjct: 1 MSSQLVQFSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI--STALVDMYAKCGSLETARQ-LFDGMLERNVVSWNSMIDA 311
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2) HSP 1 Score: 473.396 bits (1217), Expect = 2.701e-141 Identity = 285/770 (37.01%), Postives = 431/770 (55.97%), Query Frame = 3 Query: 9429 TKLIQPSLFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKA---LNAFCQARVEG-FMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLSGFMFSTFTLGTVLKAC--CVHNMNFFG--KMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLRYFYVMKNDYGIAANVKHSACIVDLLGRAGRLQDAQNFIFDSGFEDDPV-IWRALLGACRVHKDTVMGKHVAKRVIELEPHAAASYVLLYNIYDDAGNEKPASEVRKLMQDRGVKKEPGISWIEVGNKVHTFLVDDHSHEMSQLIYSRLEEMLVKINKISFNNEKLLL--DISE----AQLSGTIGMNHHSEKLAVTFGIISLPKSAPVRVMKNLRVCSDCHTTMKLISKVERREIILRDTFRFHHFKEGFCSCKDYW 11693
T L++ +F N L+ Y G A LFD MP+RNLVS+NS I +S GF E++ L + +G FM D T VL VC ++ LGK VHG + L+ + + N+L+DMYSKCG I A+++F+ + N + VSWN+++ G+ G + F+ V+R L+G T+L A C H +F K LH Y +K + + A + YAK GSL+ A ++F + +NA+I Q S + +L QM+ GL FT S+L AC +++ +GK++H I +N L+ + F+ S++ +Y G + F++ +V+W ++I GY+QNG + AL +F Q++ YG + + V AC+ + + R G + +YALK + D + S I MYAK+G + + F K SW+ MI HG A EA++LF+ M +G P+ +TFLGVLTAC+H GLI EGLRY MK+ +G+ N+KH AC++D+LGRAG+L A + + E+ V IW++LL +CR+H++ MG+ VA ++ ELEP +YVLL N+Y G + +VR+ M + ++K+ G SWIE+ KV +F+V + + + I S + +KI+K+ + + + + D+SE QL G HSEKLA+T+G+I + +RV KNLR+C DCH KLISKV REI++RD RFHHFK G CSC DYW
Sbjct: 216 TGLVE-DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN-NKNVVSWNTMVGGFSAEGDTHGTFD-VLRQMLAGGEDVKADEVTILNAVPVCFHE-SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ-----SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRG------HSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970 HSP 2 Score: 221.476 bits (563), Expect = 5.725e-57 Identity = 162/579 (27.98%), Postives = 275/579 (47.50%), Query Frame = 3 Query: 9414 VTSTSTKLIQPSLFFHNTLLLMYAKLGDFNSAHNLFDEMPQRNLVSYNSFISGYSRFGFYEKALNAFCQA-RVEGFMLDEYTYAGVLGVCGCICDVKLGKVVHGLVIVSGLNGMVFVINSLIDMYSKCGWIDQARLLFETSTANVDDVSWNSLIAGYVRLGGYNDVFELVMRMHLS----GFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHGLDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQMRRQG--LKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRKPDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASGIEPNHITFLGVLTACSHGGLIEEGLR-YFYVMKNDYGIAANVKHSAC-IVDLLGRAGRLQDAQNFIFDSGFEDDPVIWRALLGACRVH 11123
+ S ST+L + ++ MYA G + + +FD + +NL +N+ IS YSR Y++ L F + + D +TY V+ C + DV +G VHGLV+ +GL VFV N+L+ Y G++ A LF+ + VSWNS+I + G + F L+ M FM TL TVL C GK +HG+ VK LD ++V AL+DMY+K G +T+A IF +N V +N M+ F HG + QM G +K+ + T + + C K++H K + NE + + V Y+ GS+ R F+ V +W ++I G+ Q+ +L Q+ G PD F + S++SAC+++ + R G+++ + +++ + V S + +Y G+L + Q F ++ +VSW+ +I Q+GF + AL +F+ M+ GI+ I+ + V ACS + G + Y +K+ + + AC ++D+ + G + + +F+ E W A++ +H
Sbjct: 109 LVSGSTRLRNDDVLC-TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER-NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF---SAEGDTHG--TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH---LLEDDAFIACSLIDMYAKNGSITQSSK-VFNGLKEKSTASWNAMIMGYGIH 676 HSP 3 Score: 123.635 bits (309), Expect = 2.233e-26 Identity = 85/334 (25.45%), Postives = 156/334 (46.71%), Query Frame = 3 Query: 9939 GFMFSTFTLGTVLKACCVHNMNFFGKMLHGYMVKHG-LDLDVVAGTALLDMYAKTGSLTDAIQIFMCFPYRNDVMYNAMIARFLQMQTISSEHGQAALHLFCQM-RRQGLKSSKFTFSSILKACIAVENFEVGKQIHAQIFKNDLQSNEFIGTSLVDMYSFFGSMEDGLRCFNSTPKLDVVTWTSMIAGYVQNGQLENALSLFHQLLAYGRK----PDEFIISSVMSACAEMAAARSGEQIQSYALKSGVADVTIVQNSQICMYAKSGDLDSAQLTFQETKNPDVVSWSVMICSSAQHGFANEALRLFKLMIASG--IEPNHITFLGVLTACSH 10916
F+ LG +L+A G+ +H + L D V T ++ MYA GS D+ +F +N +NA+I+ + + +E L F +M L FT+ ++KAC + + +G +H + K L + F+G +LV Y G + D L+ F+ P+ ++V+W SMI + NG E + L +++ PD + +V+ CA G+ + +A+K + ++ N+ + MY+K G + +AQ+ F+ N +VVSW+ M+ + G + + + M+A G ++ + +T L + C H
Sbjct: 79 AFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR-----NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01583 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01583_La_Tanjil_v1.0 ID=rna-TanjilR_01583_La_Tanjil_v1.0; Name=rna-TanjilR_01583; organism=Lupinus angustifolius; type=mRNA; length=12849bpback to top protein sequence of rna-TanjilR_01583_La_Tanjil_v1.0 >rna-TanjilR_01583_La_Tanjil_v1.0 ID=rna-TanjilR_01583_La_Tanjil_v1.0; Name=rna-TanjilR_01583_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=561bpback to top mRNA from alignment at Chr_LG20-CM007380.1:20691384..20704232- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01583_La_Tanjil_v1.0 ID=rna-TanjilR_01583_La_Tanjil_v1.0; Name=rna-TanjilR_01583; organism=Lupinus angustifolius; type=mRNA; length=12849bp; location=Sequence derived from: Chr_LG20-CM007380.1:20691384..20704232- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG20-CM007380.1:20691384..20704232- >rna-TanjilR_01583_La_Tanjil_v1.0 ID=rna-TanjilR_01583_La_Tanjil_v1.0; Name=rna-TanjilR_01583; organism=Lupinus angustifolius; type=CDS; length=1686bp; location=Sequence derived from: Chr_LG20-CM007380.1:20691384..20704232- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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