rna-TanjilR_01578
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD_SOLTU (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Solanum tuberosum OX=4113 GN=G6PDH PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.556e-30 Identity = 67/138 (48.55%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 5795 MQVLESVVPIKDDEVVLGQYEGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIFKCM 6208 ++VL+S++PI+D+EVVLGQYEGYKDDPTVP+NSNTPTFA+++LR+HNERWEG VPFI+KAGKAL SRKA++RVQFKDVPGDIF+C Sbjct: 296 VKVLQSMLPIEDEEVVLGQYEGYKDDPTVPNNSNTPTFATMVLRIHNERWEG-----------------------------------------------------VPFIMKAGKALNSRKAEIRVQFKDVPGDIFRCQ 380 HSP 2 Score: 103.605 bits (257), Expect = 4.247e-28 Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 4086 ADLGGWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 +DLGGWTR VVEKPFGKDL S+EQLS+QIG+LFDEPQIYRIDHYLGKELVQN++V Sbjct: 166 SDLGGWTRTVVEKPFGKDLASSEQLSSQIGELFDEPQIYRIDHYLGKELVQNLLV 220 HSP 3 Score: 46.595 bits (109), Expect = 4.247e-28 Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANVQV 4404 LVLRFANR FLPLWNRDNI N+Q+ Sbjct: 219 LVLRFANRFFLPLWNRDNIDNIQI 242 HSP 4 Score: 105.145 bits (261), Expect = 1.087e-25 Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 1 Query: 7816 QASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPPTL 7983 +A+W+IFTPLLHRID GE K IPY+PGSRGPA+ADELL+ AGYVQTHGYIWIPPTL Sbjct: 456 KAAWEIFTPLLHRIDNGEVKPIPYKPGSRGPAEADELLQNAGYVQTHGYIWIPPTL 511 HSP 5 Score: 36.965 bits (84), Expect = 1.087e-25 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 7685 SIRGDQQHFVRRDELKV 7735 +IRGDQQHFVRRDELK Sbjct: 441 TIRGDQQHFVRRDELKA 457 HSP 6 Score: 73.1738 bits (178), Expect = 2.181e-11 Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 2 Query: 2777 KYVSGSYDSEDGFRLLDKXXXXXXXXXXXXXXXXRRLFYFALPPSVYPSVSKMIKACCVNKC 2962 KYVSGSYDS +GF LDK ISEHE SKNS+EGSSRRLFYFALPPSVYPSV +MIK+ C+NK Sbjct: 105 KYVSGSYDSAEGFTSLDKAISEHEFSKNSTEGSSRRLFYFALPPSVYPSVCRMIKSYCMNKS 166 HSP 7 Score: 72.7886 bits (177), Expect = 2.853e-11 Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 2 Query: 7202 KQPGLEMSTVQSELDLSYRQRYQGATIPEAYERLILDT 7315 K+PGLEMSTVQSELDLSY QRYQG IPEAYERLILDT Sbjct: 404 KKPGLEMSTVQSELDLSYGQRYQGVVIPEAYERLILDT 441 HSP 8 Score: 70.4774 bits (171), Expect = 1.285e-10 Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 7 SSEWHIEKRSISPNESPSFRDLANLEITSETGSLSIVVLGASGDLAKKKTFPALYHLYRQ 186 ++ W IEKR N+S FRD N+ ETG LSI+VLGASGDLAKKKTFPAL++LYRQ Sbjct: 2 AASWCIEKRGSIRNDS--FRDNDNI---PETGCLSIIVLGASGDLAKKKTFPALFNLYRQ 56 HSP 9 Score: 67.781 bits (164), Expect = 1.002e-9 Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 1511 SSEWHIEKRSISPNESPSFRDLANLEITSETGSLSIVVLGASGDLAKKKTFPALYHLYRQ 1690 ++ W IEKR N+S FRD N+ ETG LSI+VLGASGDLAKKKTFPAL++LYRQ Sbjct: 2 AASWCIEKRGSIRNDS--FRDNDNI---PETGCLSIIVLGASGDLAKKKTFPALFNLYRQ 56
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD5_ARATH (Glucose-6-phosphate 1-dehydrogenase 5, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=G6PD5 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.922e-30 Identity = 67/139 (48.20%), Postives = 82/139 (58.99%), Query Frame = 2 Query: 5792 NMQVLESVVPIKDDEVVLGQYEGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIFKCM 6208 ++VL+SV+PIKD+EVVLGQYEGY+DDPTVP++SNTPTFA+ ILR++NERWEG VPFILKAGKA+ S+KAD+R+QFKDVPGDIFKC Sbjct: 300 KVKVLQSVIPIKDEEVVLGQYEGYRDDPTVPNDSNTPTFATTILRINNERWEG-----------------------------------------------------VPFILKAGKAMSSKKADIRIQFKDVPGDIFKCQ 385 HSP 2 Score: 104.76 bits (260), Expect = 1.368e-25 Identity = 45/56 (80.36%), Postives = 54/56 (96.43%), Query Frame = 1 Query: 7816 QASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPPTL 7983 +A+W+IFTPLLHRIDKGE KS+PY+ GSRGPA+AD+LL+KAGY+QTHGYIWIPPTL Sbjct: 461 KAAWEIFTPLLHRIDKGEVKSVPYKQGSRGPAEADQLLKKAGYMQTHGYIWIPPTL 516 HSP 3 Score: 37.3502 bits (85), Expect = 1.368e-25 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 7685 SIRGDQQHFVRRDELKV 7735 +IRGDQQHFVRRDELK Sbjct: 446 TIRGDQQHFVRRDELKA 462 HSP 4 Score: 110.153 bits (274), Expect = 3.891e-23 Identity = 55/71 (77.46%), Postives = 60/71 (84.51%), Query Frame = 3 Query: 4086 ADLGGWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVVNCYILACLLFAHELCL 4298 +DLGGWTRIVVEKPFGKDLESAEQLS+QIG LF+EPQIYRIDHYLGKELVQNM+V L FA+ L L Sbjct: 171 SDLGGWTRIVVEKPFGKDLESAEQLSSQIGALFEEPQIYRIDHYLGKELVQNMLV-------LRFANRLFL 234 HSP 5 Score: 76.6406 bits (187), Expect = 1.471e-12 Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 2 Query: 2777 KYVSGSYDSEDGFRLLDKXXXXXXXXXXXXXXXXRRLFYFALPPSVYPSVSKMIKACCVNKC 2962 KYVSG YDSE+GF+ LDK I EHE SK ++EGSSRRLFY ALPPSVYP VSKMIKA C NK Sbjct: 110 KYVSGPYDSEEGFKRLDKAILEHEISKKTAEGSSRRLFYLALPPSVYPPVSKMIKAWCTNKS 171 HSP 6 Score: 73.559 bits (179), Expect = 1.317e-11 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 1 MGSSEWHIEKRSISPNESPSFRDLANLEITSETGSLSIVVLGASGDLAKKKTFPALYHLYRQVWQPP 201 MGS +WH+EKRS N+S + +ETGSLSI+VLGASGDLAKKKTFPAL++L+ Q + P Sbjct: 1 MGSGQWHMEKRSTLKNDSF----VKEYNPVTETGSLSIIVLGASGDLAKKKTFPALFNLFHQGFLNP 63 HSP 7 Score: 73.559 bits (179), Expect = 1.593e-11 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 1505 MGSSEWHIEKRSISPNESPSFRDLANLEITSETGSLSIVVLGASGDLAKKKTFPALYHLYRQVWQPPICV 1714 MGS +WH+EKRS N+S F + +ETGSLSI+VLGASGDLAKKKTFPAL++L+ Q + P V Sbjct: 1 MGSGQWHMEKRSTLKNDS--F--VKEYNPVTETGSLSIIVLGASGDLAKKKTFPALFNLFHQGFLNPDEV 66 HSP 8 Score: 72.4034 bits (176), Expect = 3.470e-11 Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 2 Query: 7202 KQPGLEMSTVQSELDLSYRQRYQGATIPEAYERLILDT 7315 KQPGLEM TVQSELDLSY+QRYQ +IPEAYERLILDT Sbjct: 409 KQPGLEMQTVQSELDLSYKQRYQDVSIPEAYERLILDT 446
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD_MEDSA (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Medicago sativa OX=3879 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.176e-30 Identity = 69/138 (50.00%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 5792 NMQVLESVVPIKDDEVVLGQYEGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIFKC 6205 ++VLESV+PI+DDEVVLGQYEGY DDPTVPD+SNTPTFA+ ILR+HNERWEG VPFI+KAGKAL SRKA++RVQFKDVPGDIF+ Sbjct: 299 KVKVLESVLPIRDDEVVLGQYEGYTDDPTVPDDSNTPTFATTILRIHNERWEG-----------------------------------------------------VPFIVKAGKALNSRKAEIRVQFKDVPGDIFRS 383 HSP 2 Score: 106.686 bits (265), Expect = 2.066e-27 Identity = 48/55 (87.27%), Postives = 55/55 (100.00%), Query Frame = 3 Query: 4086 ADLGGWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 +DLGGWTR+VVEKPFG+DLESAE+LSTQIG+LF+EPQIYRIDHYLGKELVQNM+V Sbjct: 170 SDLGGWTRVVVEKPFGRDLESAEELSTQIGELFEEPQIYRIDHYLGKELVQNMLV 224 HSP 3 Score: 41.5874 bits (96), Expect = 2.066e-27 Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANVQV 4404 LVLRFANR FLPLWN ++I NVQ+ Sbjct: 223 LVLRFANRFFLPLWNHNHIDNVQI 246 HSP 4 Score: 103.605 bits (257), Expect = 3.066e-25 Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 1 Query: 7816 QASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPPTL 7983 +ASW+IFTPLLH+ID+GE K +PY PGSRGPA+ADELLEKAGYVQT GYIWIPPTL Sbjct: 460 KASWQIFTPLLHKIDRGELKPVPYNPGSRGPAEADELLEKAGYVQTPGYIWIPPTL 515 HSP 5 Score: 36.965 bits (84), Expect = 3.066e-25 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 7685 SIRGDQQHFVRRDELKV 7735 +IRGDQQHFVRRDELK Sbjct: 445 TIRGDQQHFVRRDELKA 461 HSP 6 Score: 85.8853 bits (211), Expect = 2.465e-19 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 2 Query: 2777 KYVSGSYDSEDGFRLLDKXXXXXXXXXXXXXXXXRRLFYFALPPSVYPSVSKMIKACCVNK 2959 KYVSG YDSEDGFRLLDKEISEHE KNS EGSSRRLFY ALPPSVYPSV KMIK CC+NK Sbjct: 109 KYVSGPYDSEDGFRLLDKEISEHEYLKNSKEGSSRRLFYLALPPSVYPSVCKMIKTCCMNK 169 HSP 7 Score: 35.039 bits (79), Expect = 2.465e-19 Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = 1 Query: 2593 SYLVQDKDASPEQLDVLSKFLHLV 2664 SYLV +K ASP+QLD +SKFL LV Sbjct: 85 SYLVPEKGASPKQLDDVSKFLQLV 108 HSP 8 Score: 82.8037 bits (203), Expect = 1.738e-14 Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 2 Query: 1505 MGSSEWHIEKRSISPNESPSFRDLANLEITSETGSLSIVVLGASGDLAKKKTFPALYHLYRQVWQPP 1705 MG++EWH+E+R ESP R++ ETG+LSIVVLGASGDLAKKKTFPAL+HLY+Q PP Sbjct: 1 MGTNEWHVERRDSIGTESPVAREVL------ETGTLSIVVLGASGDLAKKKTFPALFHLYKQELLPP 61 HSP 9 Score: 82.8037 bits (203), Expect = 1.739e-14 Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 1 MGSSEWHIEKRSISPNESPSFRDLANLEITSETGSLSIVVLGASGDLAKKKTFPALYHLYRQVWQPP 201 MG++EWH+E+R ESP R++ ETG+LSIVVLGASGDLAKKKTFPAL+HLY+Q PP Sbjct: 1 MGTNEWHVERRDSIGTESPVAREVL------ETGTLSIVVLGASGDLAKKKTFPALFHLYKQELLPP 61 HSP 10 Score: 73.9442 bits (180), Expect = 1.124e-11 Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = 2 Query: 7202 KQPGLEMSTVQSELDLSYRQRYQGATIPEAYERLILDT 7315 KQPGLEMS VQSELDLSY QRYQG TIPEAYERLILDT Sbjct: 408 KQPGLEMSAVQSELDLSYGQRYQGITIPEAYERLILDT 445 HSP 11 Score: 55.0694 bits (131), Expect = 2.967e-10 Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 1 Query: 1273 KYVSGSYDSEDGFRLLDKEISEHESSKNS 1359 KYVSG YDSEDGFRLLDKEISEHE KNS Sbjct: 109 KYVSGPYDSEDGFRLLDKEISEHEYLKNS 137 HSP 12 Score: 35.039 bits (79), Expect = 2.967e-10 Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = 3 Query: 1089 SYLVQDKDASPEQLDVLSKFLHLV 1160 SYLV +K ASP+QLD +SKFL LV Sbjct: 85 SYLVPEKGASPKQLDDVSKFLQLV 108
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD6_ARATH (Glucose-6-phosphate 1-dehydrogenase 6, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=G6PD6 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.054e-29 Identity = 68/139 (48.92%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 5792 NMQVLESVVPIKDDEVVLGQYEGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIFKCM 6208 ++VL+SVVPI DDEVVLGQYEGY+DD TVP++SNTPTFA+ ILR+HNERWEG VPFILKAGKAL SRKA++R+QFKDVPGDIF+C Sbjct: 299 KVKVLQSVVPISDDEVVLGQYEGYRDDDTVPNDSNTPTFATTILRIHNERWEG-----------------------------------------------------VPFILKAGKALNSRKAEIRIQFKDVPGDIFRCQ 384 HSP 2 Score: 106.686 bits (265), Expect = 2.078e-29 Identity = 50/55 (90.91%), Postives = 54/55 (98.18%), Query Frame = 3 Query: 4086 ADLGGWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 +DLGGWTRIVVEKPFGKDLESAEQLS+QIG+LFDE QIYRIDHYLGKELVQNM+V Sbjct: 170 SDLGGWTRIVVEKPFGKDLESAEQLSSQIGELFDESQIYRIDHYLGKELVQNMLV 224 HSP 3 Score: 48.1358 bits (113), Expect = 2.078e-29 Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANVQV 4404 LVLRFANR FLPLWNRDNI NVQ+ Sbjct: 223 LVLRFANRFFLPLWNRDNIENVQI 246 HSP 4 Score: 106.301 bits (264), Expect = 5.577e-26 Identity = 46/56 (82.14%), Postives = 53/56 (94.64%), Query Frame = 1 Query: 7816 QASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPPTL 7983 + +W+IFTPLLHRIDKGE KSIPY+PGSRGP +AD+LLEKAGY+QTHGYIWIPPTL Sbjct: 460 KVAWEIFTPLLHRIDKGEVKSIPYKPGSRGPKEADQLLEKAGYLQTHGYIWIPPTL 515 HSP 5 Score: 36.965 bits (84), Expect = 5.577e-26 Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2 Query: 7685 SIRGDQQHFVRRDELKV 7735 +I+GDQQHFVRRDELKV Sbjct: 445 TIKGDQQHFVRRDELKV 461 HSP 6 Score: 78.9518 bits (193), Expect = 3.209e-13 Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 2 Query: 2777 KYVSGSYDSEDGFRLLDKXXXXXXXXXXXXXXXXRRLFYFALPPSVYPSVSKMIKACCVNK 2959 KYVSG YD+E+GF+ LDK ISEHE SKNS+EGSSRRLFY ALPPSVYPSV KMIK CC+NK Sbjct: 109 KYVSGPYDAEEGFQRLDKAISEHEISKNSTEGSSRRLFYLALPPSVYPSVCKMIKTCCMNK 169 HSP 7 Score: 78.1814 bits (191), Expect = 5.895e-13 Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 1505 MGSSEWHIEKRSISPNESPSFRDLANLEITSETGSLSIVVLGASGDLAKKKTFPALYHLYRQVWQPP 1705 MGS +WH+EKRS N+S + I ETG LSI+VLGASGDLAKKKTFPAL++LYRQ + P Sbjct: 1 MGSGQWHVEKRSTFRNDSF----VREYGIVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLNP 63 HSP 8 Score: 78.1814 bits (191), Expect = 5.898e-13 Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 1 MGSSEWHIEKRSISPNESPSFRDLANLEITSETGSLSIVVLGASGDLAKKKTFPALYHLYRQVWQPP 201 MGS +WH+EKRS N+S + I ETG LSI+VLGASGDLAKKKTFPAL++LYRQ + P Sbjct: 1 MGSGQWHVEKRSTFRNDSF----VREYGIVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLNP 63 HSP 9 Score: 71.633 bits (174), Expect = 6.068e-11 Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 2 Query: 7202 KQPGLEMSTVQSELDLSYRQRYQGATIPEAYERLILDT 7315 KQPGL+M+TVQSELDLSY QRYQG IPEAYERLILDT Sbjct: 408 KQPGLDMNTVQSELDLSYGQRYQGVAIPEAYERLILDT 445
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD1_MOUSE (Glucose-6-phosphate 1-dehydrogenase X OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 6.007e-20 Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 3 Query: 4098 GWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 GW RI+VEKPFG+DL+S+ QLS I LF E QIYRIDHYLGKE+VQN++V Sbjct: 163 GWNRIIVEKPFGRDLQSSNQLSNHISSLFREDQIYRIDHYLGKEMVQNLMV 213 HSP 2 Score: 40.0466 bits (92), Expect = 6.007e-20 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANV 4398 +VLRFANR+F P+WNRDNIA V Sbjct: 212 MVLRFANRIFGPIWNRDNIACV 233 HSP 3 Score: 78.5666 bits (192), Expect = 4.058e-13 Identity = 51/146 (34.93%), Postives = 64/146 (43.84%), Query Frame = 2 Query: 5795 MQVLESVVPIKDDEVVLGQY-----------EGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIF 6199 ++VL+ + ++ D VVLGQY GY DDPTVP S T TFA+ +L V NERW+G VPFIL+ GKAL RKA+VR+QF+DV GDIF Sbjct: 289 VKVLKCISEVETDNVVLGQYVGNPNGEGEAANGYLDDPTVPHGSTTATFAAAVLYVENERWDG-----------------------------------------------------VPFILRCGKALNERKAEVRLQFRDVAGDIF 381 HSP 4 Score: 63.929 bits (154), Expect = 1.633e-8 Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 1 Query: 7795 LYFVSS--YQASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPP 7977 ++FV S + +W+IFTPLLH+ID+ + + IPY GSRGP +ADEL+++ G+ Y W+ P Sbjct: 450 MHFVRSDELREAWRIFTPLLHKIDREKPQPIPYVYGSRGPTEADELMKRVGFQYEGTYKWVNP 512
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD_RAT (Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 6.259e-20 Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 3 Query: 4098 GWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 GW RI+VEKPFG+DL+S+ QLS I LF E QIYRIDHYLGKE+VQN++V Sbjct: 163 GWNRIIVEKPFGRDLQSSNQLSNHISSLFREDQIYRIDHYLGKEMVQNLMV 213 HSP 2 Score: 40.0466 bits (92), Expect = 6.259e-20 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANV 4398 +VLRFANR+F P+WNRDNIA V Sbjct: 212 MVLRFANRIFGPIWNRDNIACV 233 HSP 3 Score: 78.5666 bits (192), Expect = 4.543e-13 Identity = 51/146 (34.93%), Postives = 64/146 (43.84%), Query Frame = 2 Query: 5795 MQVLESVVPIKDDEVVLGQY-----------EGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIF 6199 ++VL+ + ++ D VVLGQY GY DDPTVP S T TFA+ +L V NERW+G VPFIL+ GKAL RKA+VR+QF+DV GDIF Sbjct: 289 VKVLKCISEVETDNVVLGQYVGNPSGEGEATNGYLDDPTVPHGSTTATFAAAVLYVENERWDG-----------------------------------------------------VPFILRCGKALNERKAEVRLQFRDVAGDIF 381 HSP 4 Score: 63.929 bits (154), Expect = 1.633e-8 Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 1 Query: 7795 LYFVSS--YQASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPP 7977 ++FV S + +W+IFTPLLH+ID+ + + IPY GSRGP +ADEL+++ G+ Y W+ P Sbjct: 450 MHFVRSDELREAWRIFTPLLHKIDREKPQPIPYVYGSRGPTEADELMKRVGFQYEGTYKWVNP 512
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD_CRIGR (Glucose-6-phosphate 1-dehydrogenase OS=Cricetulus griseus OX=10029 GN=G6PD PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 6.468e-20 Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 3 Query: 4098 GWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 GW RI+VEKPFG+DL+S+ QLS I LF E QIYRIDHYLGKE+VQN++V Sbjct: 163 GWNRIIVEKPFGRDLQSSNQLSNHISSLFREDQIYRIDHYLGKEMVQNLMV 213 HSP 2 Score: 40.0466 bits (92), Expect = 6.468e-20 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANV 4398 +VLRFANR+F P+WNRDNIA V Sbjct: 212 MVLRFANRIFGPIWNRDNIACV 233 HSP 3 Score: 75.8702 bits (185), Expect = 2.762e-12 Identity = 50/146 (34.25%), Postives = 63/146 (43.15%), Query Frame = 2 Query: 5795 MQVLESVVPIKDDEVVLGQY-----------EGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIF 6199 ++VL+ + ++ VVLGQY GY DDPTVP S T TFA+ +L V NERW+G VPFIL+ GKAL RKA+VR+QF+DV GDIF Sbjct: 289 VKVLKCISEVETSNVVLGQYVGNPNGEGEATNGYLDDPTVPRGSTTATFAAAVLYVENERWDG-----------------------------------------------------VPFILRCGKALNERKAEVRLQFRDVAGDIF 381 HSP 4 Score: 63.1586 bits (152), Expect = 2.344e-8 Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 1 Query: 7795 LYFVSS--YQASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPP 7977 ++FV S + +W+IFTPLLH+ID+ + + IPY GSRGP +ADEL+++ G+ Y W+ P Sbjct: 450 MHFVRSDELREAWRIFTPLLHKIDQEKPQPIPYVYGSRGPTEADELMKRVGFQYEGTYKWVNP 512
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD_HUMAN (Glucose-6-phosphate 1-dehydrogenase OS=Homo sapiens OX=9606 GN=G6PD PE=1 SV=4) HSP 1 Score: 81.6481 bits (200), Expect = 1.067e-19 Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 3 Query: 4098 GWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 GW RI+VEKPFG+DL+S+++LS I LF E QIYRIDHYLGKE+VQN++V Sbjct: 163 GWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMV 213 HSP 2 Score: 40.0466 bits (92), Expect = 1.067e-19 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANV 4398 +VLRFANR+F P+WNRDNIA V Sbjct: 212 MVLRFANRIFGPIWNRDNIACV 233 HSP 3 Score: 77.411 bits (189), Expect = 8.866e-13 Identity = 51/146 (34.93%), Postives = 65/146 (44.52%), Query Frame = 2 Query: 5795 MQVLESVVPIKDDEVVLGQY-----------EGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIF 6199 ++VL+ + ++ + VVLGQY +GY DDPTVP S T TFA+V+L V NERW+G VPFIL+ GKAL RKA+VR+QF DV GDIF Sbjct: 289 VKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDG-----------------------------------------------------VPFILRCGKALNERKAEVRLQFHDVAGDIF 381 HSP 4 Score: 60.4622 bits (145), Expect = 1.781e-7 Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 7795 LYFVSS--YQASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPP 7977 ++FV S + +W+IFTPLLH+I+ + K IPY GSRGP +ADEL+++ G+ Y W+ P Sbjct: 450 MHFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELMKRVGFQYEGTYKWVNP 512
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD_TAKRU (Glucose-6-phosphate 1-dehydrogenase OS=Takifugu rubripes OX=31033 GN=g6pd PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.310e-19 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 3 Query: 4080 FVADLGGWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 F GW R++VEKPFG DL+S+E+LST + LF E QIYRIDHYLGKE+VQN++V Sbjct: 172 FCMSAKGWNRVIVEKPFGHDLQSSEELSTHLSSLFTEDQIYRIDHYLGKEMVQNLMV 228 HSP 2 Score: 38.5058 bits (88), Expect = 1.310e-19 Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANV 4398 +VLRF NR+F P+WNRDN+A V Sbjct: 227 MVLRFGNRIFGPIWNRDNVACV 248 HSP 3 Score: 84.7297 bits (208), Expect = 5.643e-15 Identity = 54/148 (36.49%), Postives = 66/148 (44.59%), Query Frame = 2 Query: 5792 NMQVLESVVPIKDDEVVLGQYEG-----------YKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIFK 6202 ++VL+ +VP +VVLGQY G Y DDPTVP S TFA+V+L VHNERW+G VPFIL+ GKAL RKA+VR+QF DVPGDIF+ Sbjct: 303 KVKVLKCIVPASMSDVVLGQYVGDPEGEGDAKLGYLDDPTVPKGSTQATFATVVLYVHNERWDG-----------------------------------------------------VPFILRCGKALNERKAEVRLQFTDVPGDIFR 397 HSP 4 Score: 64.3142 bits (155), Expect = 1.031e-8 Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 7795 LYFVSS--YQASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPP 7977 ++FV+S + +W+IFTPLLH+I+K + K IPY+ GSRGPA+ADEL ++ G+ Y W+ P Sbjct: 465 MHFVASDELREAWRIFTPLLHQIEKEKPKPIPYKYGSRGPAEADELEKRVGFRYEGTYKWVNP 527
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Match: G6PD_MACRO (Glucose-6-phosphate 1-dehydrogenase OS=Macropus robustus OX=9319 GN=G6PD PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.896e-19 Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 3 Query: 4098 GWTRIVVEKPFGKDLESAEQLSTQIGKLFDEPQIYRIDHYLGKELVQNMVV 4250 GW R++VEKPFGKDL+S+++LS I LF E QIYRIDHYLGKE+VQN++V Sbjct: 163 GWNRVIVEKPFGKDLQSSDKLSNHISSLFHEDQIYRIDHYLGKEMVQNLMV 213 HSP 2 Score: 39.2762 bits (90), Expect = 1.896e-19 Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 1 Query: 4333 LVLRFANRMFLPLWNRDNIANV 4398 +VLRF NR+F P+WNRDNIA V Sbjct: 212 MVLRFGNRIFGPIWNRDNIACV 233 HSP 3 Score: 79.337 bits (194), Expect = 2.368e-13 Identity = 51/148 (34.46%), Postives = 67/148 (45.27%), Query Frame = 2 Query: 5792 NMQVLESVVPIKDDEVVLGQY-----------EGYKDDPTVPDNSNTPTFASVILRVHNERWEGMRISLEINIIVHIHSWARTCLYYFLLSAIYFCEFDRLNHNWHILMASLSYVSGVPFILKAGKALGSRKADVRVQFKDVPGDIFK 6202 ++VL+ + ++ +VVLGQY +GY DDPTVP S T TFA+V+L V NERW+G VPFIL+ GKAL RKA+VR+QF+DV GDIF+ Sbjct: 288 KVKVLKCISEVRATDVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDG-----------------------------------------------------VPFILRCGKALNERKAEVRLQFRDVAGDIFQ 382 HSP 4 Score: 59.3066 bits (142), Expect = 4.579e-7 Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 7795 LYFVSS--YQASWKIFTPLLHRIDKGEFKSIPYEPGSRGPAQADELLEKAGYVQTHGYIWIPP 7977 ++FV S + +W+IFTPLLH I+K + + I Y GSRGP +ADEL+++ G+ Y W+ P Sbjct: 450 MHFVRSDELREAWRIFTPLLHHIEKEKTQPIAYVYGSRGPPEADELMKRVGFQYEGTYKWVNP 512 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01578 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01578_La_Tanjil_v1.0 ID=rna-TanjilR_01578_La_Tanjil_v1.0; Name=rna-TanjilR_01578; organism=Lupinus angustifolius; type=mRNA; length=7986bpback to top protein sequence of rna-TanjilR_01578_La_Tanjil_v1.0 >rna-TanjilR_01578_La_Tanjil_v1.0 ID=rna-TanjilR_01578_La_Tanjil_v1.0; Name=rna-TanjilR_01578_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=694bpback to top mRNA from alignment at Chr_LG20-CM007380.1:20742628..20750613+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01578_La_Tanjil_v1.0 ID=rna-TanjilR_01578_La_Tanjil_v1.0; Name=rna-TanjilR_01578; organism=Lupinus angustifolius; type=mRNA; length=7986bp; location=Sequence derived from: Chr_LG20-CM007380.1:20742628..20750613+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG20-CM007380.1:20742628..20750613+ >rna-TanjilR_01578_La_Tanjil_v1.0 ID=rna-TanjilR_01578_La_Tanjil_v1.0; Name=rna-TanjilR_01578; organism=Lupinus angustifolius; type=CDS; length=2085bp; location=Sequence derived from: Chr_LG20-CM007380.1:20742628..20750613+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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