Transcript Overview
| Name | rna-TanjilR_01573 |
|---|
| Unique Name | rna-TanjilR_01573_La_Tanjil_v1.0 |
|---|
| Type | mRNA |
|---|
| Organism | Lupinus angustifolius (blue lupin) |
|---|
| Sequence length | 4075 |
|---|
| Product | hypothetical protein |
|---|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_01573 | rna-TanjilR_01573_La_Tanjil_v1.0-protein | Lupinus angustifolius | polypeptide |
| rna-TanjilR_01573_La_Tanjil_v1.0 | rna-TanjilR_01573_La_Tanjil_v1.0 | Lupinus angustifolius | polypeptide |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793540..20793881 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793540..20793881 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793112..20793187 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793112..20793187 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792645..20792850 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792645..20792850 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792420..20792506 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792420..20792506 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792247..20792339 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792247..20792339 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20791199..20791353 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20791199..20791353 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790976..20791060 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790976..20791060 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790803..20790889 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790803..20790889 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790601..20790720 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790601..20790720 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790242..20790343 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790242..20790343 | Lupinus angustifolius | CDS |
| rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20789807..20789974 | rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20789807..20789974 | Lupinus angustifolius | CDS |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793540..20793881 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793540..20793881 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793112..20793187 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793112..20793187 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792645..20792850 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792645..20792850 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792420..20792506 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792420..20792506 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792247..20792339 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792247..20792339 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20791199..20791353 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20791199..20791353 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790976..20791060 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790976..20791060 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790803..20790889 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790803..20790889 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790601..20790720 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790601..20790720 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790242..20790343 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790242..20790343 | Lupinus angustifolius | exon |
| rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20789807..20789974 | rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20789807..20789974 | Lupinus angustifolius | exon |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR015353 | Rubisco LSMT, substrate-binding domain | PFAM | PF09273 | Rubis-subs-bind | coord: 354..475
e-value: 2.3E-20
score: 73.6 |
| IPR036464 | Rubisco LSMT, substrate-binding domain superfamily | GENE3D | 3.90.1420.10 | | coord: 337..489
e-value: 3.2E-27
score: 97.3 |
| IPR036464 | Rubisco LSMT, substrate-binding domain superfamily | SUPERFAMILY | 81822 | RuBisCo LSMT C-terminal, substrate-binding domain | coord: 332..497 |
| None | No IPR available | GENE3D | 3.90.1410.10 | | coord: 44..335
e-value: 2.3E-45
score: 157.1 |
| None | No IPR available | SUPERFAMILY | 82199 | SET domain | coord: 73..341 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01573_La_Tanjil_v1.0 ID=rna-TanjilR_01573_La_Tanjil_v1.0; Name=rna-TanjilR_01573; organism=Lupinus angustifolius; type=mRNA; length=4075bp
ATGGAACTTTCGCGTCTCTCGATTCCATTCTCCGACGAACACTTCTTCTC
CCATCCAATCCGTTGTTCTCCTTCATTACCCTCCTTCTTCCCCCTATCAC
TCCGTAAGAGCCACCGTGCCCTCCGCCGGAGAAGCTACTGCTCCGCCTCC
AACCCAGAAACATTGGTCGCCGGCACCAAAACCGTCGCCGTTTCTGGCAA
GAAAGAAGAAGAGCAAGGTGACTTGAAATCTTGGATGCACAAGCATGGTC
TTCCTCCATGTAAGGTTGTTCTGAAAGATAGGCCTTCTCATGATAATACC
CATAAGCCTATACATTATGTTGCTGCCAGTGAAGATCTTCAGGTTCAGGA
AAAATAGTTTAATTTAGAGTAAATATTCATTTCAGTCTATTATGTTTTTT
GACCTTATCGATTCGGTGCCTCCAAAATTTGAAAAACCTAAAATGTTAAT
AAAAAATTCATATGTGGGTCAAACTAGTCCTTTTTATGATCAAATTAGTT
GTAAAATATGCTAAAAAGAACTAATTTGAGCACATTTGAAATTTCTGGGA
ACCAAATTTTTTCAGTTTTTGAGGGACCAAAATGTAAGTTCGGAAAAATG
TGAGACTGAAATGAGTATCATTTAAGGTTTTTGCTTTTCATTAGTTCTTG
ATTGATTCTGTAATGGGTTTTGTGACGGTTTTCTTTTGTTGTAGGCGGGC
GATGTTGCATTCTCTGTTCCAAATTCGTTGGTTGTCACATTAGAGAGGGT
ATTGGGAAATGAGACTATTGGTAATTCAATGTTCTTGTGATTTTTATGAT
AAGTATTGTGTCTCTTGTGAAATTTATTTGCAGGTTGCATTTCTTTCTTT
TTAACTTTGCCAATTTATGTCCTAAGAAATTAGAATAGAATTGGAAGGTA
TCTTTTTTTGTGAACACAAAATACATTTAACATACTTGGAGTGAATAGGA
GTGTTTTGTATTAACAGATTGGAGGCGTATTGAAGCATTTCAAATTTTGA
GTTTATACGTGGTGCTTTATCATTTTTGCAGCTGAGCTATTGACCACAAA
CAAATTGTCTGAATTGGCATGCTTGGCATTGTATCTGATGTATGAGAAAA
AACAAGGGAAGAAGTCTTTCTGGTATCCATACATCAGGGAGCTTGATCGT
CAACGAGGTAGGGGTCAGCTGGCTGTTGAATCGCCTCTTCTATGGTCAGA
ATCTGAGCTTGCTTACCTTACCGGAAGTCCTACTAAGGTTTTCCTTCTCT
CTCGCTCCCGATTACAGATGAACATATGTATTATTACTGATAAATAAATG
ATAACCTTATAATGGTGTAAAAATAGTTGTTACTTCTAAATATAGCCAAA
CTAAGTTTTGTTGGCTGTGATTTAGGCTGATGTTCTTCAAAGATCTGAAG
GAATAAAAAGAGAGTACAATGAACTTGACACAGTCTGGTTTATGGCTGGT
TCTCTGTTTCAGGTAATTAAACATGCAGTAGACAAAATGAAATTGTTATT
TATATTATGCCATTTAGTGCTTACACTATATGCATGATGCAGCAATACCC
ATATGACATTCCTACAGAGGCTTTTTCATATGAGATTTTCAAACAAGCCT
TTGTTGCAGTTCAGTCTTGTGTGGTGCATTTACAGGTAAAATTTCCTTCT
TACCTGGTATGTTTTTGTGTGTAGGGGGGGGTATGCAAAAAAGCATTCTA
ACTAAATGGAGCTTGATTATATATTAGTTACACAGTTACCATATCATATG
TAGCCATGGAATTAGCTGAATCTTAAGTTTTATACAATTATCAGTAAACA
CCCAATTTGGCCCCTCGAGAAATTTGTGTGCTTCAATTTGGTCCCTAAAG
AATTAAAAGTCCAAATTGGTCCTTAAAGATCTCAAGTTTTAGGGACTAAT
TTGACCACAAATTGAAATCTTTGGGGACTAATTTGTATTGGGAGGGGATC
CACTTACTCTAGGAATAAGTTAAAAAAAACTTACTTCACATCTTAGCTGT
CCATTCTATGAAAATCAAATGGTTCAGATATACTGACTAATTCAAATCAT
GTGAACCATTAGATTTTCATAGAATGGATGACTAAGATGTGGAGTAGGCT
TTATTAACTTACTTCCGGAATAAGTGGACCCCCTTTCATTTGTATTTCCC
AAATCTTAAGGGATCAAATTGGTTCACACGAATATTTTAGGGACCAAATT
TTGGTTGTTTAATCTACAATTAAATGTCAGGCCACAGTGCTTTACAACAC
AATTTATTATTCAATCTAGTTTGTAATATTTTGATTGATTTGTAGTTTGT
AGATGAAGTGGCAATAAGCTAATCCAAATAGAAAATCTTACTAGTTACTA
CTGGGACTATTGAATTTGCATGATATTTTAACGCAAATGAATATTTTATT
GATATTATTTCTTACTTTTACACAAGGCACTAATTTCCTTGAAATGTTTG
GATCGTCGTTGCCCTTTTTTTAATTCTTTTTCTTTCAACAAAGTGTGCAA
ATTGATTTTTTGTCCTTTTTGAAATCAGAAAGTCAGTTTAGCTCGGAGAT
TTGCTTTGGTTCCCCTGGGGCCTCCTTTGCTGACCTATGGAAGTAAGTGC
AAGGCAATGTTAACTGCTGTTGATGATGCTGTTGAGCTAGTGGTTGATCG
CCCATATAAAGCTGGTGACCCAATTGTTGTCTGGTATAATGTTTTTCATT
TGACATCTTCGAACTGAGCAAAAATATTTCTCACATAAGCTTCTGCTAAT
TTGGAATTGACTTAGTAGTTTTTACCCATTTCAGTAGCTTCATCACGAGC
TTTAAAGTTGGCCATTTTCAGGTGTGGTCCACAGCCTAATTCAAAGTTAC
TTATAAACTATGGTTTTGTTGATGAAGATAATTCTAATGACCGTCTAGTA
GTTGAGGTACAAGGTGGACATATACTTCTTTTTCATTCCGGTGTTTTGTT
GTTTCTATTTTACCTTCCTGATACATGATACATCTGTCTCAGGCAGCTTT
GAGCACTGAAGATCCACAGTATCAAGAGAAAAGAATGGTTGCTCAAAGAA
ATGGAAAGTTATCAATTCAAGTTTTCCATGTACTAATATCGAATTCTTAA
TGTTACTGCATGTTTTTGAGTGATTTTGCTCTTTAATTTCCTTATTTCAA
CCTTGGTGTAGGTTAATGTTGGGAAGGAGAGGGAAGCTGTCTTAGATATG
CTTCCTTATTTACGTTTGGGCTTTCTTTCAGATCCTTCTGAGATGCAATC
TGTCATCTCCTCTCAAGGTCCAGTTTGTCCTGTAAGTTTGTGAATATGGT
ATTTGAAATTTGTCAAAGCTCTTACGAACCCATATCTGTCCACCTGCACA
AAAGTAAAATCAAGTTCTCATGATTTCCTCCCCACCTCCTTATTTCATAT
TTTGCTTTCTTAAGGCTCTTATCATGAAATAATTTGATAAATTTAGAATC
TACTATTTTATTTTGTTCTTTTTTTCTTTGATCTTATTGAATTAATTGGA
CAGTAAATCTTGAATCTGACTCCCATTATATATTATAGATAAGCCCCTGT
ATGGAGCGGGCTGTGTTAGACCAGCTTGCTGATTATTTCAAGACTAGGCT
GGCTGGCTATCCCACTACCTTAGCTGAAGATGAGTCTATGGTACTGTTTA
ATCAAAATAGAAGTTTACTGTATTGTAATCCAGAGGAATTCATTGGTACC
CATCTTTTTCTATGGTACGGTGCAGCAGGCGAATTGTCAAGAATTTGATG
GGCTATTTATTATTTTGAAATTTATCATGAAATCAACATTCTATAAATGC
TTGACAATTCATCCGGGGACCGGGGTACCATACACATCAGGCACCATATA
ATTTCCTGTAAGGTGTGACTTTTCAACCTTCCACTGATAATCTATATTGT
ACACTAGTTGACAGATGATAATCTAAATCCAAAGAAGCGAGTTGCTACTC
AACTTGTTAGACTGGAAAAGAAAATGCTTCATGCATGTTTGCAGGCAACC
ATCGATTTCATAAATCAGCTACCAGATCACACTGTATCTCCATGCCCTGC
TCCTTATGCACCTACTTTGAAATGA back to topprotein sequence of rna-TanjilR_01573_La_Tanjil_v1.0 >rna-TanjilR_01573_La_Tanjil_v1.0 ID=rna-TanjilR_01573_La_Tanjil_v1.0; Name=rna-TanjilR_01573_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=506bp
MELSRLSIPFSDEHFFSHPIRCSPSLPSFFPLSLRKSHRALRRRSYCSAS
NPETLVAGTKTVAVSGKKEEEQGDLKSWMHKHGLPPCKVVLKDRPSHDNT
HKPIHYVAASEDLQAGDVAFSVPNSLVVTLERVLGNETIAELLTTNKLSE
LACLALYLMYEKKQGKKSFWYPYIRELDRQRGRGQLAVESPLLWSESELA
YLTGSPTKADVLQRSEGIKREYNELDTVWFMAGSLFQQYPYDIPTEAFSY
EIFKQAFVAVQSCVVHLQKVSLARRFALVPLGPPLLTYGSKCKAMLTAVD
DAVELVVDRPYKAGDPIVVWCGPQPNSKLLINYGFVDEDNSNDRLVVEAA
LSTEDPQYQEKRMVAQRNGKLSIQVFHVNVGKEREAVLDMLPYLRLGFLS
DPSEMQSVISSQGPVCPISPCMERAVLDQLADYFKTRLAGYPTTLAEDES
MLTDDNLNPKKRVATQLVRLEKKMLHACLQATIDFINQLPDHTVSPCPAP
YAPTLK back to topmRNA from alignment at Chr_LG20-CM007380.1:20789807..20793881- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >rna-TanjilR_01573_La_Tanjil_v1.0 ID=rna-TanjilR_01573_La_Tanjil_v1.0; Name=rna-TanjilR_01573; organism=Lupinus angustifolius; type=mRNA; length=4075bp; location=Sequence derived from: Chr_LG20-CM007380.1:20789807..20793881- (Lupinus angustifolius
ATGGAACTTTCGCGTCTCTCGATTCCATTCTCCGACGAACACTTCTTCTC
CCATCCAATCCGTTGTTCTCCTTCATTACCCTCCTTCTTCCCCCTATCAC
TCCGTAAGAGCCACCGTGCCCTCCGCCGGAGAAGCTACTGCTCCGCCTCC
AACCCAGAAACATTGGTCGCCGGCACCAAAACCGTCGCCGTTTCTGGCAA
GAAAGAAGAAGAGCAAGGTGACTTGAAATCTTGGATGCACAAGCATGGTC
TTCCTCCATGTAAGGTTGTTCTGAAAGATAGGCCTTCTCATGATAATACC
CATAAGCCTATACATTATGTTGCTGCCAGTGAAGATCTTCAGGTTCAGGA
AAAATAGTTTAATTTAGAGTAAATATTCATTTCAGTCTATTATGTTTTTT
GACCTTATCGATTCGGTGCCTCCAAAATTTGAAAAACCTAAAATGTTAAT
AAAAAATTCATATGTGGGTCAAACTAGTCCTTTTTATGATCAAATTAGTT
GTAAAATATGCTAAAAAGAACTAATTTGAGCACATTTGAAATTTCTGGGA
ACCAAATTTTTTCAGTTTTTGAGGGACCAAAATGTAAGTTCGGAAAAATG
TGAGACTGAAATGAGTATCATTTAAGGTTTTTGCTTTTCATTAGTTCTTG
ATTGATTCTGTAATGGGTTTTGTGACGGTTTTCTTTTGTTGTAGGCGGGC
GATGTTGCATTCTCTGTTCCAAATTCGTTGGTTGTCACATTAGAGAGGGT
ATTGGGAAATGAGACTATTGGTAATTCAATGTTCTTGTGATTTTTATGAT
AAGTATTGTGTCTCTTGTGAAATTTATTTGCAGGTTGCATTTCTTTCTTT
TTAACTTTGCCAATTTATGTCCTAAGAAATTAGAATAGAATTGGAAGGTA
TCTTTTTTTGTGAACACAAAATACATTTAACATACTTGGAGTGAATAGGA
GTGTTTTGTATTAACAGATTGGAGGCGTATTGAAGCATTTCAAATTTTGA
GTTTATACGTGGTGCTTTATCATTTTTGCAGCTGAGCTATTGACCACAAA
CAAATTGTCTGAATTGGCATGCTTGGCATTGTATCTGATGTATGAGAAAA
AACAAGGGAAGAAGTCTTTCTGGTATCCATACATCAGGGAGCTTGATCGT
CAACGAGGTAGGGGTCAGCTGGCTGTTGAATCGCCTCTTCTATGGTCAGA
ATCTGAGCTTGCTTACCTTACCGGAAGTCCTACTAAGGTTTTCCTTCTCT
CTCGCTCCCGATTACAGATGAACATATGTATTATTACTGATAAATAAATG
ATAACCTTATAATGGTGTAAAAATAGTTGTTACTTCTAAATATAGCCAAA
CTAAGTTTTGTTGGCTGTGATTTAGGCTGATGTTCTTCAAAGATCTGAAG
GAATAAAAAGAGAGTACAATGAACTTGACACAGTCTGGTTTATGGCTGGT
TCTCTGTTTCAGGTAATTAAACATGCAGTAGACAAAATGAAATTGTTATT
TATATTATGCCATTTAGTGCTTACACTATATGCATGATGCAGCAATACCC
ATATGACATTCCTACAGAGGCTTTTTCATATGAGATTTTCAAACAAGCCT
TTGTTGCAGTTCAGTCTTGTGTGGTGCATTTACAGGTAAAATTTCCTTCT
TACCTGGTATGTTTTTGTGTGTAGGGGGGGGTATGCAAAAAAGCATTCTA
ACTAAATGGAGCTTGATTATATATTAGTTACACAGTTACCATATCATATG
TAGCCATGGAATTAGCTGAATCTTAAGTTTTATACAATTATCAGTAAACA
CCCAATTTGGCCCCTCGAGAAATTTGTGTGCTTCAATTTGGTCCCTAAAG
AATTAAAAGTCCAAATTGGTCCTTAAAGATCTCAAGTTTTAGGGACTAAT
TTGACCACAAATTGAAATCTTTGGGGACTAATTTGTATTGGGAGGGGATC
CACTTACTCTAGGAATAAGTTAAAAAAAACTTACTTCACATCTTAGCTGT
CCATTCTATGAAAATCAAATGGTTCAGATATACTGACTAATTCAAATCAT
GTGAACCATTAGATTTTCATAGAATGGATGACTAAGATGTGGAGTAGGCT
TTATTAACTTACTTCCGGAATAAGTGGACCCCCTTTCATTTGTATTTCCC
AAATCTTAAGGGATCAAATTGGTTCACACGAATATTTTAGGGACCAAATT
TTGGTTGTTTAATCTACAATTAAATGTCAGGCCACAGTGCTTTACAACAC
AATTTATTATTCAATCTAGTTTGTAATATTTTGATTGATTTGTAGTTTGT
AGATGAAGTGGCAATAAGCTAATCCAAATAGAAAATCTTACTAGTTACTA
CTGGGACTATTGAATTTGCATGATATTTTAACGCAAATGAATATTTTATT
GATATTATTTCTTACTTTTACACAAGGCACTAATTTCCTTGAAATGTTTG
GATCGTCGTTGCCCTTTTTTTAATTCTTTTTCTTTCAACAAAGTGTGCAA
ATTGATTTTTTGTCCTTTTTGAAATCAGAAAGTCAGTTTAGCTCGGAGAT
TTGCTTTGGTTCCCCTGGGGCCTCCTTTGCTGACCTATGGAAGTAAGTGC
AAGGCAATGTTAACTGCTGTTGATGATGCTGTTGAGCTAGTGGTTGATCG
CCCATATAAAGCTGGTGACCCAATTGTTGTCTGGTATAATGTTTTTCATT
TGACATCTTCGAACTGAGCAAAAATATTTCTCACATAAGCTTCTGCTAAT
TTGGAATTGACTTAGTAGTTTTTACCCATTTCAGTAGCTTCATCACGAGC
TTTAAAGTTGGCCATTTTCAGGTGTGGTCCACAGCCTAATTCAAAGTTAC
TTATAAACTATGGTTTTGTTGATGAAGATAATTCTAATGACCGTCTAGTA
GTTGAGGTACAAGGTGGACATATACTTCTTTTTCATTCCGGTGTTTTGTT
GTTTCTATTTTACCTTCCTGATACATGATACATCTGTCTCAGGCAGCTTT
GAGCACTGAAGATCCACAGTATCAAGAGAAAAGAATGGTTGCTCAAAGAA
ATGGAAAGTTATCAATTCAAGTTTTCCATGTACTAATATCGAATTCTTAA
TGTTACTGCATGTTTTTGAGTGATTTTGCTCTTTAATTTCCTTATTTCAA
CCTTGGTGTAGGTTAATGTTGGGAAGGAGAGGGAAGCTGTCTTAGATATG
CTTCCTTATTTACGTTTGGGCTTTCTTTCAGATCCTTCTGAGATGCAATC
TGTCATCTCCTCTCAAGGTCCAGTTTGTCCTGTAAGTTTGTGAATATGGT
ATTTGAAATTTGTCAAAGCTCTTACGAACCCATATCTGTCCACCTGCACA
AAAGTAAAATCAAGTTCTCATGATTTCCTCCCCACCTCCTTATTTCATAT
TTTGCTTTCTTAAGGCTCTTATCATGAAATAATTTGATAAATTTAGAATC
TACTATTTTATTTTGTTCTTTTTTTCTTTGATCTTATTGAATTAATTGGA
CAGTAAATCTTGAATCTGACTCCCATTATATATTATAGATAAGCCCCTGT
ATGGAGCGGGCTGTGTTAGACCAGCTTGCTGATTATTTCAAGACTAGGCT
GGCTGGCTATCCCACTACCTTAGCTGAAGATGAGTCTATGGTACTGTTTA
ATCAAAATAGAAGTTTACTGTATTGTAATCCAGAGGAATTCATTGGTACC
CATCTTTTTCTATGGTACGGTGCAGCAGGCGAATTGTCAAGAATTTGATG
GGCTATTTATTATTTTGAAATTTATCATGAAATCAACATTCTATAAATGC
TTGACAATTCATCCGGGGACCGGGGTACCATACACATCAGGCACCATATA
ATTTCCTGTAAGGTGTGACTTTTCAACCTTCCACTGATAATCTATATTGT
ACACTAGTTGACAGATGATAATCTAAATCCAAAGAAGCGAGTTGCTACTC
AACTTGTTAGACTGGAAAAGAAAATGCTTCATGCATGTTTGCAGGCAACC
ATCGATTTCATAAATCAGCTACCAGATCACACTGTATCTCCATGCCCTGC
TCCTTATGCACCTACTTTGAAATGA back to topCoding sequence (CDS) from alignment at Chr_LG20-CM007380.1:20789807..20793881- >rna-TanjilR_01573_La_Tanjil_v1.0 ID=rna-TanjilR_01573_La_Tanjil_v1.0; Name=rna-TanjilR_01573; organism=Lupinus angustifolius; type=CDS; length=1521bp; location=Sequence derived from: Chr_LG20-CM007380.1:20789807..20793881- (Lupinus angustifolius
ATGGAACTTTCGCGTCTCTCGATTCCATTCTCCGACGAACACTTCTTCTC
CCATCCAATCCGTTGTTCTCCTTCATTACCCTCCTTCTTCCCCCTATCAC
TCCGTAAGAGCCACCGTGCCCTCCGCCGGAGAAGCTACTGCTCCGCCTCC
AACCCAGAAACATTGGTCGCCGGCACCAAAACCGTCGCCGTTTCTGGCAA
GAAAGAAGAAGAGCAAGGTGACTTGAAATCTTGGATGCACAAGCATGGTC
TTCCTCCATGTAAGGTTGTTCTGAAAGATAGGCCTTCTCATGATAATACC
CATAAGCCTATACATTATGTTGCTGCCAGTGAAGATCTTCAGGCGGGCGA
TGTTGCATTCTCTGTTCCAAATTCGTTGGTTGTCACATTAGAGAGGGTAT
TGGGAAATGAGACTATTGCTGAGCTATTGACCACAAACAAATTGTCTGAA
TTGGCATGCTTGGCATTGTATCTGATGTATGAGAAAAAACAAGGGAAGAA
GTCTTTCTGGTATCCATACATCAGGGAGCTTGATCGTCAACGAGGTAGGG
GTCAGCTGGCTGTTGAATCGCCTCTTCTATGGTCAGAATCTGAGCTTGCT
TACCTTACCGGAAGTCCTACTAAGGCTGATGTTCTTCAAAGATCTGAAGG
AATAAAAAGAGAGTACAATGAACTTGACACAGTCTGGTTTATGGCTGGTT
CTCTGTTTCAGCAATACCCATATGACATTCCTACAGAGGCTTTTTCATAT
GAGATTTTCAAACAAGCCTTTGTTGCAGTTCAGTCTTGTGTGGTGCATTT
ACAGAAAGTCAGTTTAGCTCGGAGATTTGCTTTGGTTCCCCTGGGGCCTC
CTTTGCTGACCTATGGAAGTAAGTGCAAGGCAATGTTAACTGCTGTTGAT
GATGCTGTTGAGCTAGTGGTTGATCGCCCATATAAAGCTGGTGACCCAAT
TGTTGTCTGGTGTGGTCCACAGCCTAATTCAAAGTTACTTATAAACTATG
GTTTTGTTGATGAAGATAATTCTAATGACCGTCTAGTAGTTGAGGCAGCT
TTGAGCACTGAAGATCCACAGTATCAAGAGAAAAGAATGGTTGCTCAAAG
AAATGGAAAGTTATCAATTCAAGTTTTCCATGTTAATGTTGGGAAGGAGA
GGGAAGCTGTCTTAGATATGCTTCCTTATTTACGTTTGGGCTTTCTTTCA
GATCCTTCTGAGATGCAATCTGTCATCTCCTCTCAAGGTCCAGTTTGTCC
TATAAGCCCCTGTATGGAGCGGGCTGTGTTAGACCAGCTTGCTGATTATT
TCAAGACTAGGCTGGCTGGCTATCCCACTACCTTAGCTGAAGATGAGTCT
ATGTTGACAGATGATAATCTAAATCCAAAGAAGCGAGTTGCTACTCAACT
TGTTAGACTGGAAAAGAAAATGCTTCATGCATGTTTGCAGGCAACCATCG
ATTTCATAAATCAGCTACCAGATCACACTGTATCTCCATGCCCTGCTCCT
TATGCACCTACTTTGAAATGA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR015353 | Rubisco_LSMT_subst-bd |
| IPR036464 | Rubisco_LSMT_subst-bd_sf |
|
