rna-TanjilR_01573

Transcript Overview
Namerna-TanjilR_01573
Unique Namerna-TanjilR_01573_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length4075
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG20-CM007380.1supercontigChr_LG20-CM007380.1:20789807..20793881 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL086Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR489Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR500Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0780Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0784Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0667Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0833Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0861Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0554Pisum sativum Cameor genome v1aPisum sativum
anpvR0776Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0651Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0664Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0746Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0799Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0637Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0658Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0656Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0623Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0653Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0620Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0632Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0732Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0614Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0698Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0749Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0757Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0651Cicer arietinum
anccaR0682Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0688Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0762Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0777Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0784Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0721Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR0744Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0755Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0761Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0770Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0766Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0778Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR0624Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0632Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0787Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0811Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
jg45904.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004489536.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun04g083000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.1g119760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr04.321Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cr_14785.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigan.11G081200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat1g084760.1Pisum sativum Cameor genome v1aPisum sativum
Cc_v2.0_18629.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
evm.model.Chr04.729.1.6211316cVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_14661Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_11G00523.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Tiffany.R1.1g089920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_04663.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun04g083000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan10g212800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat01G0217900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va10G052220.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014654933.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigst.11G042100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.004G056200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_06039Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_01573gene-TanjilG_01573_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01573rna-TanjilR_01573_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_01573_La_Tanjil_v1.0rna-TanjilR_01573_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793540..20793881rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793540..20793881Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793112..20793187rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793112..20793187Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792645..20792850rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792645..20792850Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792420..20792506rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792420..20792506Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792247..20792339rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792247..20792339Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20791199..20791353rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20791199..20791353Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790976..20791060rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790976..20791060Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790803..20790889rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790803..20790889Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790601..20790720rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790601..20790720Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790242..20790343rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790242..20790343Lupinus angustifoliusCDS
rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20789807..20789974rna-TanjilR_01573_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20789807..20789974Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793540..20793881rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793540..20793881Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793112..20793187rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20793112..20793187Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792645..20792850rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792645..20792850Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792420..20792506rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792420..20792506Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792247..20792339rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20792247..20792339Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20791199..20791353rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20791199..20791353Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790976..20791060rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790976..20791060Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790803..20790889rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790803..20790889Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790601..20790720rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790601..20790720Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790242..20790343rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20790242..20790343Lupinus angustifoliusexon
rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20789807..20789974rna-TanjilR_01573_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20789807..20789974Lupinus angustifoliusexon


Homology
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01573 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015353Rubisco LSMT, substrate-binding domainPFAMPF09273Rubis-subs-bindcoord: 354..475
e-value: 2.3E-20
score: 73.6
IPR036464Rubisco LSMT, substrate-binding domain superfamilyGENE3D3.90.1420.10coord: 337..489
e-value: 3.2E-27
score: 97.3
IPR036464Rubisco LSMT, substrate-binding domain superfamilySUPERFAMILY81822RuBisCo LSMT C-terminal, substrate-binding domaincoord: 332..497
NoneNo IPR availableGENE3D3.90.1410.10coord: 44..335
e-value: 2.3E-45
score: 157.1
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 73..341

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_01573_La_Tanjil_v1.0 ID=rna-TanjilR_01573_La_Tanjil_v1.0; Name=rna-TanjilR_01573; organism=Lupinus angustifolius; type=mRNA; length=4075bp
ATGGAACTTTCGCGTCTCTCGATTCCATTCTCCGACGAACACTTCTTCTC
CCATCCAATCCGTTGTTCTCCTTCATTACCCTCCTTCTTCCCCCTATCAC
TCCGTAAGAGCCACCGTGCCCTCCGCCGGAGAAGCTACTGCTCCGCCTCC
AACCCAGAAACATTGGTCGCCGGCACCAAAACCGTCGCCGTTTCTGGCAA
GAAAGAAGAAGAGCAAGGTGACTTGAAATCTTGGATGCACAAGCATGGTC
TTCCTCCATGTAAGGTTGTTCTGAAAGATAGGCCTTCTCATGATAATACC
CATAAGCCTATACATTATGTTGCTGCCAGTGAAGATCTTCAGGTTCAGGA
AAAATAGTTTAATTTAGAGTAAATATTCATTTCAGTCTATTATGTTTTTT
GACCTTATCGATTCGGTGCCTCCAAAATTTGAAAAACCTAAAATGTTAAT
AAAAAATTCATATGTGGGTCAAACTAGTCCTTTTTATGATCAAATTAGTT
GTAAAATATGCTAAAAAGAACTAATTTGAGCACATTTGAAATTTCTGGGA
ACCAAATTTTTTCAGTTTTTGAGGGACCAAAATGTAAGTTCGGAAAAATG
TGAGACTGAAATGAGTATCATTTAAGGTTTTTGCTTTTCATTAGTTCTTG
ATTGATTCTGTAATGGGTTTTGTGACGGTTTTCTTTTGTTGTAGGCGGGC
GATGTTGCATTCTCTGTTCCAAATTCGTTGGTTGTCACATTAGAGAGGGT
ATTGGGAAATGAGACTATTGGTAATTCAATGTTCTTGTGATTTTTATGAT
AAGTATTGTGTCTCTTGTGAAATTTATTTGCAGGTTGCATTTCTTTCTTT
TTAACTTTGCCAATTTATGTCCTAAGAAATTAGAATAGAATTGGAAGGTA
TCTTTTTTTGTGAACACAAAATACATTTAACATACTTGGAGTGAATAGGA
GTGTTTTGTATTAACAGATTGGAGGCGTATTGAAGCATTTCAAATTTTGA
GTTTATACGTGGTGCTTTATCATTTTTGCAGCTGAGCTATTGACCACAAA
CAAATTGTCTGAATTGGCATGCTTGGCATTGTATCTGATGTATGAGAAAA
AACAAGGGAAGAAGTCTTTCTGGTATCCATACATCAGGGAGCTTGATCGT
CAACGAGGTAGGGGTCAGCTGGCTGTTGAATCGCCTCTTCTATGGTCAGA
ATCTGAGCTTGCTTACCTTACCGGAAGTCCTACTAAGGTTTTCCTTCTCT
CTCGCTCCCGATTACAGATGAACATATGTATTATTACTGATAAATAAATG
ATAACCTTATAATGGTGTAAAAATAGTTGTTACTTCTAAATATAGCCAAA
CTAAGTTTTGTTGGCTGTGATTTAGGCTGATGTTCTTCAAAGATCTGAAG
GAATAAAAAGAGAGTACAATGAACTTGACACAGTCTGGTTTATGGCTGGT
TCTCTGTTTCAGGTAATTAAACATGCAGTAGACAAAATGAAATTGTTATT
TATATTATGCCATTTAGTGCTTACACTATATGCATGATGCAGCAATACCC
ATATGACATTCCTACAGAGGCTTTTTCATATGAGATTTTCAAACAAGCCT
TTGTTGCAGTTCAGTCTTGTGTGGTGCATTTACAGGTAAAATTTCCTTCT
TACCTGGTATGTTTTTGTGTGTAGGGGGGGGTATGCAAAAAAGCATTCTA
ACTAAATGGAGCTTGATTATATATTAGTTACACAGTTACCATATCATATG
TAGCCATGGAATTAGCTGAATCTTAAGTTTTATACAATTATCAGTAAACA
CCCAATTTGGCCCCTCGAGAAATTTGTGTGCTTCAATTTGGTCCCTAAAG
AATTAAAAGTCCAAATTGGTCCTTAAAGATCTCAAGTTTTAGGGACTAAT
TTGACCACAAATTGAAATCTTTGGGGACTAATTTGTATTGGGAGGGGATC
CACTTACTCTAGGAATAAGTTAAAAAAAACTTACTTCACATCTTAGCTGT
CCATTCTATGAAAATCAAATGGTTCAGATATACTGACTAATTCAAATCAT
GTGAACCATTAGATTTTCATAGAATGGATGACTAAGATGTGGAGTAGGCT
TTATTAACTTACTTCCGGAATAAGTGGACCCCCTTTCATTTGTATTTCCC
AAATCTTAAGGGATCAAATTGGTTCACACGAATATTTTAGGGACCAAATT
TTGGTTGTTTAATCTACAATTAAATGTCAGGCCACAGTGCTTTACAACAC
AATTTATTATTCAATCTAGTTTGTAATATTTTGATTGATTTGTAGTTTGT
AGATGAAGTGGCAATAAGCTAATCCAAATAGAAAATCTTACTAGTTACTA
CTGGGACTATTGAATTTGCATGATATTTTAACGCAAATGAATATTTTATT
GATATTATTTCTTACTTTTACACAAGGCACTAATTTCCTTGAAATGTTTG
GATCGTCGTTGCCCTTTTTTTAATTCTTTTTCTTTCAACAAAGTGTGCAA
ATTGATTTTTTGTCCTTTTTGAAATCAGAAAGTCAGTTTAGCTCGGAGAT
TTGCTTTGGTTCCCCTGGGGCCTCCTTTGCTGACCTATGGAAGTAAGTGC
AAGGCAATGTTAACTGCTGTTGATGATGCTGTTGAGCTAGTGGTTGATCG
CCCATATAAAGCTGGTGACCCAATTGTTGTCTGGTATAATGTTTTTCATT
TGACATCTTCGAACTGAGCAAAAATATTTCTCACATAAGCTTCTGCTAAT
TTGGAATTGACTTAGTAGTTTTTACCCATTTCAGTAGCTTCATCACGAGC
TTTAAAGTTGGCCATTTTCAGGTGTGGTCCACAGCCTAATTCAAAGTTAC
TTATAAACTATGGTTTTGTTGATGAAGATAATTCTAATGACCGTCTAGTA
GTTGAGGTACAAGGTGGACATATACTTCTTTTTCATTCCGGTGTTTTGTT
GTTTCTATTTTACCTTCCTGATACATGATACATCTGTCTCAGGCAGCTTT
GAGCACTGAAGATCCACAGTATCAAGAGAAAAGAATGGTTGCTCAAAGAA
ATGGAAAGTTATCAATTCAAGTTTTCCATGTACTAATATCGAATTCTTAA
TGTTACTGCATGTTTTTGAGTGATTTTGCTCTTTAATTTCCTTATTTCAA
CCTTGGTGTAGGTTAATGTTGGGAAGGAGAGGGAAGCTGTCTTAGATATG
CTTCCTTATTTACGTTTGGGCTTTCTTTCAGATCCTTCTGAGATGCAATC
TGTCATCTCCTCTCAAGGTCCAGTTTGTCCTGTAAGTTTGTGAATATGGT
ATTTGAAATTTGTCAAAGCTCTTACGAACCCATATCTGTCCACCTGCACA
AAAGTAAAATCAAGTTCTCATGATTTCCTCCCCACCTCCTTATTTCATAT
TTTGCTTTCTTAAGGCTCTTATCATGAAATAATTTGATAAATTTAGAATC
TACTATTTTATTTTGTTCTTTTTTTCTTTGATCTTATTGAATTAATTGGA
CAGTAAATCTTGAATCTGACTCCCATTATATATTATAGATAAGCCCCTGT
ATGGAGCGGGCTGTGTTAGACCAGCTTGCTGATTATTTCAAGACTAGGCT
GGCTGGCTATCCCACTACCTTAGCTGAAGATGAGTCTATGGTACTGTTTA
ATCAAAATAGAAGTTTACTGTATTGTAATCCAGAGGAATTCATTGGTACC
CATCTTTTTCTATGGTACGGTGCAGCAGGCGAATTGTCAAGAATTTGATG
GGCTATTTATTATTTTGAAATTTATCATGAAATCAACATTCTATAAATGC
TTGACAATTCATCCGGGGACCGGGGTACCATACACATCAGGCACCATATA
ATTTCCTGTAAGGTGTGACTTTTCAACCTTCCACTGATAATCTATATTGT
ACACTAGTTGACAGATGATAATCTAAATCCAAAGAAGCGAGTTGCTACTC
AACTTGTTAGACTGGAAAAGAAAATGCTTCATGCATGTTTGCAGGCAACC
ATCGATTTCATAAATCAGCTACCAGATCACACTGTATCTCCATGCCCTGC
TCCTTATGCACCTACTTTGAAATGA
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protein sequence of rna-TanjilR_01573_La_Tanjil_v1.0

>rna-TanjilR_01573_La_Tanjil_v1.0 ID=rna-TanjilR_01573_La_Tanjil_v1.0; Name=rna-TanjilR_01573_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=506bp
MELSRLSIPFSDEHFFSHPIRCSPSLPSFFPLSLRKSHRALRRRSYCSAS
NPETLVAGTKTVAVSGKKEEEQGDLKSWMHKHGLPPCKVVLKDRPSHDNT
HKPIHYVAASEDLQAGDVAFSVPNSLVVTLERVLGNETIAELLTTNKLSE
LACLALYLMYEKKQGKKSFWYPYIRELDRQRGRGQLAVESPLLWSESELA
YLTGSPTKADVLQRSEGIKREYNELDTVWFMAGSLFQQYPYDIPTEAFSY
EIFKQAFVAVQSCVVHLQKVSLARRFALVPLGPPLLTYGSKCKAMLTAVD
DAVELVVDRPYKAGDPIVVWCGPQPNSKLLINYGFVDEDNSNDRLVVEAA
LSTEDPQYQEKRMVAQRNGKLSIQVFHVNVGKEREAVLDMLPYLRLGFLS
DPSEMQSVISSQGPVCPISPCMERAVLDQLADYFKTRLAGYPTTLAEDES
MLTDDNLNPKKRVATQLVRLEKKMLHACLQATIDFINQLPDHTVSPCPAP
YAPTLK
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mRNA from alignment at Chr_LG20-CM007380.1:20789807..20793881-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_01573_La_Tanjil_v1.0 ID=rna-TanjilR_01573_La_Tanjil_v1.0; Name=rna-TanjilR_01573; organism=Lupinus angustifolius; type=mRNA; length=4075bp; location=Sequence derived from: Chr_LG20-CM007380.1:20789807..20793881- (Lupinus angustifolius
ATGGAACTTTCGCGTCTCTCGATTCCATTCTCCGACGAACACTTCTTCTC
CCATCCAATCCGTTGTTCTCCTTCATTACCCTCCTTCTTCCCCCTATCAC
TCCGTAAGAGCCACCGTGCCCTCCGCCGGAGAAGCTACTGCTCCGCCTCC
AACCCAGAAACATTGGTCGCCGGCACCAAAACCGTCGCCGTTTCTGGCAA
GAAAGAAGAAGAGCAAGGTGACTTGAAATCTTGGATGCACAAGCATGGTC
TTCCTCCATGTAAGGTTGTTCTGAAAGATAGGCCTTCTCATGATAATACC
CATAAGCCTATACATTATGTTGCTGCCAGTGAAGATCTTCAGGTTCAGGA
AAAATAGTTTAATTTAGAGTAAATATTCATTTCAGTCTATTATGTTTTTT
GACCTTATCGATTCGGTGCCTCCAAAATTTGAAAAACCTAAAATGTTAAT
AAAAAATTCATATGTGGGTCAAACTAGTCCTTTTTATGATCAAATTAGTT
GTAAAATATGCTAAAAAGAACTAATTTGAGCACATTTGAAATTTCTGGGA
ACCAAATTTTTTCAGTTTTTGAGGGACCAAAATGTAAGTTCGGAAAAATG
TGAGACTGAAATGAGTATCATTTAAGGTTTTTGCTTTTCATTAGTTCTTG
ATTGATTCTGTAATGGGTTTTGTGACGGTTTTCTTTTGTTGTAGGCGGGC
GATGTTGCATTCTCTGTTCCAAATTCGTTGGTTGTCACATTAGAGAGGGT
ATTGGGAAATGAGACTATTGGTAATTCAATGTTCTTGTGATTTTTATGAT
AAGTATTGTGTCTCTTGTGAAATTTATTTGCAGGTTGCATTTCTTTCTTT
TTAACTTTGCCAATTTATGTCCTAAGAAATTAGAATAGAATTGGAAGGTA
TCTTTTTTTGTGAACACAAAATACATTTAACATACTTGGAGTGAATAGGA
GTGTTTTGTATTAACAGATTGGAGGCGTATTGAAGCATTTCAAATTTTGA
GTTTATACGTGGTGCTTTATCATTTTTGCAGCTGAGCTATTGACCACAAA
CAAATTGTCTGAATTGGCATGCTTGGCATTGTATCTGATGTATGAGAAAA
AACAAGGGAAGAAGTCTTTCTGGTATCCATACATCAGGGAGCTTGATCGT
CAACGAGGTAGGGGTCAGCTGGCTGTTGAATCGCCTCTTCTATGGTCAGA
ATCTGAGCTTGCTTACCTTACCGGAAGTCCTACTAAGGTTTTCCTTCTCT
CTCGCTCCCGATTACAGATGAACATATGTATTATTACTGATAAATAAATG
ATAACCTTATAATGGTGTAAAAATAGTTGTTACTTCTAAATATAGCCAAA
CTAAGTTTTGTTGGCTGTGATTTAGGCTGATGTTCTTCAAAGATCTGAAG
GAATAAAAAGAGAGTACAATGAACTTGACACAGTCTGGTTTATGGCTGGT
TCTCTGTTTCAGGTAATTAAACATGCAGTAGACAAAATGAAATTGTTATT
TATATTATGCCATTTAGTGCTTACACTATATGCATGATGCAGCAATACCC
ATATGACATTCCTACAGAGGCTTTTTCATATGAGATTTTCAAACAAGCCT
TTGTTGCAGTTCAGTCTTGTGTGGTGCATTTACAGGTAAAATTTCCTTCT
TACCTGGTATGTTTTTGTGTGTAGGGGGGGGTATGCAAAAAAGCATTCTA
ACTAAATGGAGCTTGATTATATATTAGTTACACAGTTACCATATCATATG
TAGCCATGGAATTAGCTGAATCTTAAGTTTTATACAATTATCAGTAAACA
CCCAATTTGGCCCCTCGAGAAATTTGTGTGCTTCAATTTGGTCCCTAAAG
AATTAAAAGTCCAAATTGGTCCTTAAAGATCTCAAGTTTTAGGGACTAAT
TTGACCACAAATTGAAATCTTTGGGGACTAATTTGTATTGGGAGGGGATC
CACTTACTCTAGGAATAAGTTAAAAAAAACTTACTTCACATCTTAGCTGT
CCATTCTATGAAAATCAAATGGTTCAGATATACTGACTAATTCAAATCAT
GTGAACCATTAGATTTTCATAGAATGGATGACTAAGATGTGGAGTAGGCT
TTATTAACTTACTTCCGGAATAAGTGGACCCCCTTTCATTTGTATTTCCC
AAATCTTAAGGGATCAAATTGGTTCACACGAATATTTTAGGGACCAAATT
TTGGTTGTTTAATCTACAATTAAATGTCAGGCCACAGTGCTTTACAACAC
AATTTATTATTCAATCTAGTTTGTAATATTTTGATTGATTTGTAGTTTGT
AGATGAAGTGGCAATAAGCTAATCCAAATAGAAAATCTTACTAGTTACTA
CTGGGACTATTGAATTTGCATGATATTTTAACGCAAATGAATATTTTATT
GATATTATTTCTTACTTTTACACAAGGCACTAATTTCCTTGAAATGTTTG
GATCGTCGTTGCCCTTTTTTTAATTCTTTTTCTTTCAACAAAGTGTGCAA
ATTGATTTTTTGTCCTTTTTGAAATCAGAAAGTCAGTTTAGCTCGGAGAT
TTGCTTTGGTTCCCCTGGGGCCTCCTTTGCTGACCTATGGAAGTAAGTGC
AAGGCAATGTTAACTGCTGTTGATGATGCTGTTGAGCTAGTGGTTGATCG
CCCATATAAAGCTGGTGACCCAATTGTTGTCTGGTATAATGTTTTTCATT
TGACATCTTCGAACTGAGCAAAAATATTTCTCACATAAGCTTCTGCTAAT
TTGGAATTGACTTAGTAGTTTTTACCCATTTCAGTAGCTTCATCACGAGC
TTTAAAGTTGGCCATTTTCAGGTGTGGTCCACAGCCTAATTCAAAGTTAC
TTATAAACTATGGTTTTGTTGATGAAGATAATTCTAATGACCGTCTAGTA
GTTGAGGTACAAGGTGGACATATACTTCTTTTTCATTCCGGTGTTTTGTT
GTTTCTATTTTACCTTCCTGATACATGATACATCTGTCTCAGGCAGCTTT
GAGCACTGAAGATCCACAGTATCAAGAGAAAAGAATGGTTGCTCAAAGAA
ATGGAAAGTTATCAATTCAAGTTTTCCATGTACTAATATCGAATTCTTAA
TGTTACTGCATGTTTTTGAGTGATTTTGCTCTTTAATTTCCTTATTTCAA
CCTTGGTGTAGGTTAATGTTGGGAAGGAGAGGGAAGCTGTCTTAGATATG
CTTCCTTATTTACGTTTGGGCTTTCTTTCAGATCCTTCTGAGATGCAATC
TGTCATCTCCTCTCAAGGTCCAGTTTGTCCTGTAAGTTTGTGAATATGGT
ATTTGAAATTTGTCAAAGCTCTTACGAACCCATATCTGTCCACCTGCACA
AAAGTAAAATCAAGTTCTCATGATTTCCTCCCCACCTCCTTATTTCATAT
TTTGCTTTCTTAAGGCTCTTATCATGAAATAATTTGATAAATTTAGAATC
TACTATTTTATTTTGTTCTTTTTTTCTTTGATCTTATTGAATTAATTGGA
CAGTAAATCTTGAATCTGACTCCCATTATATATTATAGATAAGCCCCTGT
ATGGAGCGGGCTGTGTTAGACCAGCTTGCTGATTATTTCAAGACTAGGCT
GGCTGGCTATCCCACTACCTTAGCTGAAGATGAGTCTATGGTACTGTTTA
ATCAAAATAGAAGTTTACTGTATTGTAATCCAGAGGAATTCATTGGTACC
CATCTTTTTCTATGGTACGGTGCAGCAGGCGAATTGTCAAGAATTTGATG
GGCTATTTATTATTTTGAAATTTATCATGAAATCAACATTCTATAAATGC
TTGACAATTCATCCGGGGACCGGGGTACCATACACATCAGGCACCATATA
ATTTCCTGTAAGGTGTGACTTTTCAACCTTCCACTGATAATCTATATTGT
ACACTAGTTGACAGATGATAATCTAAATCCAAAGAAGCGAGTTGCTACTC
AACTTGTTAGACTGGAAAAGAAAATGCTTCATGCATGTTTGCAGGCAACC
ATCGATTTCATAAATCAGCTACCAGATCACACTGTATCTCCATGCCCTGC
TCCTTATGCACCTACTTTGAAATGA
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Coding sequence (CDS) from alignment at Chr_LG20-CM007380.1:20789807..20793881-

>rna-TanjilR_01573_La_Tanjil_v1.0 ID=rna-TanjilR_01573_La_Tanjil_v1.0; Name=rna-TanjilR_01573; organism=Lupinus angustifolius; type=CDS; length=1521bp; location=Sequence derived from: Chr_LG20-CM007380.1:20789807..20793881- (Lupinus angustifolius
ATGGAACTTTCGCGTCTCTCGATTCCATTCTCCGACGAACACTTCTTCTC
CCATCCAATCCGTTGTTCTCCTTCATTACCCTCCTTCTTCCCCCTATCAC
TCCGTAAGAGCCACCGTGCCCTCCGCCGGAGAAGCTACTGCTCCGCCTCC
AACCCAGAAACATTGGTCGCCGGCACCAAAACCGTCGCCGTTTCTGGCAA
GAAAGAAGAAGAGCAAGGTGACTTGAAATCTTGGATGCACAAGCATGGTC
TTCCTCCATGTAAGGTTGTTCTGAAAGATAGGCCTTCTCATGATAATACC
CATAAGCCTATACATTATGTTGCTGCCAGTGAAGATCTTCAGGCGGGCGA
TGTTGCATTCTCTGTTCCAAATTCGTTGGTTGTCACATTAGAGAGGGTAT
TGGGAAATGAGACTATTGCTGAGCTATTGACCACAAACAAATTGTCTGAA
TTGGCATGCTTGGCATTGTATCTGATGTATGAGAAAAAACAAGGGAAGAA
GTCTTTCTGGTATCCATACATCAGGGAGCTTGATCGTCAACGAGGTAGGG
GTCAGCTGGCTGTTGAATCGCCTCTTCTATGGTCAGAATCTGAGCTTGCT
TACCTTACCGGAAGTCCTACTAAGGCTGATGTTCTTCAAAGATCTGAAGG
AATAAAAAGAGAGTACAATGAACTTGACACAGTCTGGTTTATGGCTGGTT
CTCTGTTTCAGCAATACCCATATGACATTCCTACAGAGGCTTTTTCATAT
GAGATTTTCAAACAAGCCTTTGTTGCAGTTCAGTCTTGTGTGGTGCATTT
ACAGAAAGTCAGTTTAGCTCGGAGATTTGCTTTGGTTCCCCTGGGGCCTC
CTTTGCTGACCTATGGAAGTAAGTGCAAGGCAATGTTAACTGCTGTTGAT
GATGCTGTTGAGCTAGTGGTTGATCGCCCATATAAAGCTGGTGACCCAAT
TGTTGTCTGGTGTGGTCCACAGCCTAATTCAAAGTTACTTATAAACTATG
GTTTTGTTGATGAAGATAATTCTAATGACCGTCTAGTAGTTGAGGCAGCT
TTGAGCACTGAAGATCCACAGTATCAAGAGAAAAGAATGGTTGCTCAAAG
AAATGGAAAGTTATCAATTCAAGTTTTCCATGTTAATGTTGGGAAGGAGA
GGGAAGCTGTCTTAGATATGCTTCCTTATTTACGTTTGGGCTTTCTTTCA
GATCCTTCTGAGATGCAATCTGTCATCTCCTCTCAAGGTCCAGTTTGTCC
TATAAGCCCCTGTATGGAGCGGGCTGTGTTAGACCAGCTTGCTGATTATT
TCAAGACTAGGCTGGCTGGCTATCCCACTACCTTAGCTGAAGATGAGTCT
ATGTTGACAGATGATAATCTAAATCCAAAGAAGCGAGTTGCTACTCAACT
TGTTAGACTGGAAAAGAAAATGCTTCATGCATGTTTGCAGGCAACCATCG
ATTTCATAAATCAGCTACCAGATCACACTGTATCTCCATGCCCTGCTCCT
TATGCACCTACTTTGAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR015353Rubisco_LSMT_subst-bd
IPR036464Rubisco_LSMT_subst-bd_sf