rna-TanjilR_30683
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana OX=3702 GN=WIN2 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 8.534e-38 Identity = 81/127 (63.78%), Postives = 83/127 (65.35%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 1965
LF GHGG RAAEYVKQNLFSNLI HPKFISDT +AI ADAYN TDSEFLKSE+S NRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN
Sbjct: 64 LFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTTAAI-----------------------------------ADAYNQTDSEFLKSENSQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 155 HSP 2 Score: 70.8626 bits (172), Expect = 3.378e-23 Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 2
Query: 2654 VTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 2758
V +AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ
Sbjct: 181 VMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 215 HSP 3 Score: 62.003 bits (149), Expect = 3.378e-23 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
AVSRDHKPDQ+DERQRIEDAGGFVMWAG
Sbjct: 158 AVSRDHKPDQSDERQRIEDAGGFVMWAG 185 HSP 4 Score: 91.6633 bits (226), Expect = 1.553e-18 Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = 2
Query: 719 SHNGKFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDG----------IFTSFSHLHLHPRYVQ*T 904
S NGKFSYGYASSPG+RSSMEDFYETRIDGV+GEIVGLFGVFDG FS+L HP+++ T
Sbjct: 27 SQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDT 98 HSP 5 Score: 63.929 bits (154), Expect = 2.253e-9 Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 3
Query: 3621 LFSPQEAVAMVKPIEDAAEAAKTLLIEASKRGSADNITCVVVRFLMNQ 3764
+ S +EAV M+K IED E AK L++EA +RGSADNITCVVVRF +Q
Sbjct: 236 VVSNEEAVGMIKAIEDPEEGAKRLMMEAYQRGSADNITCVVVRFFSDQ 283 HSP 6 Score: 56.6102 bits (135), Expect = 5.345e-7 Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 2
Query: 2948 MAVNLIFLPVYIAKLQTCFVVLQEEKVDSSLEFLILASDGLWDVVSNE 3091
+AV+ F + + +QEEKVDSSLEFLILASDGLWDVVSNE
Sbjct: 193 LAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNE 240
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana OX=3702 GN=At5g24940 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.588e-36 Identity = 80/127 (62.99%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 1965
LF GHGG RAAEYVK++LFSNLI+HPKFISDTKSAI ADAY HTDSE LKSE+SH RDAGSTASTAILVGDRLLVANVGDSRAVICRGGN
Sbjct: 64 LFGVFDGHGGSRAAEYVKRHLFSNLITHPKFISDTKSAI-----------------------------------ADAYTHTDSELLKSENSHTRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 155 HSP 2 Score: 72.0182 bits (175), Expect = 4.502e-24 Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 2
Query: 2654 VTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 2758
V +AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ
Sbjct: 181 VMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 215 HSP 3 Score: 63.5438 bits (153), Expect = 4.502e-24 Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
AVSRDHKPDQ+DER+RIE+AGGFVMWAG
Sbjct: 158 AVSRDHKPDQSDERERIENAGGFVMWAG 185 HSP 4 Score: 90.8929 bits (224), Expect = 1.592e-17 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 2
Query: 719 SHNGKFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDGIFTS----------FSHLHLHPRYVQ*TEN 910
S NGKFSYGYASS G+RSSMEDF+ETRIDG+DGEIVGLFGVFDG S FS+L HP+++ T++
Sbjct: 27 SQNGKFSYGYASSAGKRSSMEDFFETRIDGIDGEIVGLFGVFDGHGGSRAAEYVKRHLFSNLITHPKFISDTKS 100 HSP 5 Score: 64.3142 bits (155), Expect = 4.399e-9 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 3
Query: 3621 LFSPQEAVAMVKPIEDAAEAAKTLLIEASKRGSADNITCVVVRFL 3755
+FS +EAVA+VK +ED E+ K L+ EA KRGSADNITCVVVRFL
Sbjct: 236 VFSNEEAVAVVKEVEDPEESTKKLVGEAIKRGSADNITCVVVRFL 280
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0149800 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.037e-36 Identity = 77/127 (60.63%), Postives = 82/127 (64.57%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 1965
LF GHGG RAAEYVKQ+LFSNLI HPKFISD KSAI A+ YNHTDSEFLK+E SH RDAGSTASTAILVGDRLLVANVGDSRAV+CRGG+
Sbjct: 113 LFGVFDGHGGARAAEYVKQHLFSNLIKHPKFISDIKSAI-----------------------------------AETYNHTDSEFLKAESSHTRDAGSTASTAILVGDRLLVANVGDSRAVVCRGGD 204 HSP 2 Score: 67.781 bits (164), Expect = 4.839e-22 Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 2
Query: 2651 IVTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQVCVLSTII 2782
V +AGTWRVGGVLAVSRAFGD+LLKQYVVADPEI+ ++ + +
Sbjct: 229 FVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEIVDSSL 272 HSP 3 Score: 61.2326 bits (147), Expect = 4.839e-22 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
AVSRDHKPDQ+DERQRIEDAGGFVMWAG
Sbjct: 207 AVSRDHKPDQSDERQRIEDAGGFVMWAG 234 HSP 4 Score: 87.0409 bits (214), Expect = 9.758e-17 Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = 2
Query: 719 SHNGKFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDGIFTS----------FSHLHLHPRYV 895
S NGKFSYGYAS+PG+R+SMEDFYETRIDGVDGE +GLFGVFDG + FS+L HP+++
Sbjct: 76 SENGKFSYGYASAPGKRASMEDFYETRIDGVDGETIGLFGVFDGHGGARAAEYVKQHLFSNLIKHPKFI 144 HSP 5 Score: 58.151 bits (139), Expect = 2.394e-7 Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 3
Query: 3621 LFSPQEAVAMVKPIEDAAEAAKTLLIEASKRGSADNITCVVVRFLMNQGT 3770
+ S +EAV MV+PI+D +AAK LL EA +RGSADNIT V+VRFL T
Sbjct: 285 VVSNKEAVDMVRPIQDPEQAAKRLLQEAYQRGSADNITVVIVRFLEGTTT 334
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana OX=3702 GN=At5g10740 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.461e-36 Identity = 78/126 (61.90%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGG 1962
LF GHGG RAAEYVK++LFSNLI+HPKFISDTKSAI DAYNHTDSE LKSE+SHNRDAGSTASTAILVGDRL+VANVGDSRAVI RGG
Sbjct: 64 LFGVFDGHGGARAAEYVKRHLFSNLITHPKFISDTKSAIT-----------------------------------DAYNHTDSELLKSENSHNRDAGSTASTAILVGDRLVVANVGDSRAVISRGG 154 HSP 2 Score: 71.2478 bits (173), Expect = 8.525e-24 Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 2
Query: 2654 VTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 2758
V +AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ
Sbjct: 181 VMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 215 HSP 3 Score: 63.5438 bits (153), Expect = 8.525e-24 Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
AVSRDHKPDQ+DER+RIE+AGGFVMWAG
Sbjct: 158 AVSRDHKPDQSDERERIENAGGFVMWAG 185 HSP 4 Score: 87.4261 bits (215), Expect = 7.420e-17 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 2
Query: 719 SHNGKFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDGIFTS----------FSHLHLHPRYVQ*TEN 910
S NGKFSYGYASS G+RSSMEDF+ETRIDG++GEIVGLFGVFDG + FS+L HP+++ T++
Sbjct: 27 SQNGKFSYGYASSAGKRSSMEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSNLITHPKFISDTKS 100 HSP 5 Score: 63.5438 bits (153), Expect = 4.232e-9 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 3
Query: 3621 LFSPQEAVAMVKPIEDAAEAAKTLLIEASKRGSADNITCVVVRFL 3755
+FS + AVAMVK +ED ++AK L+ EA KRGSADNITCVVVRFL
Sbjct: 236 VFSNEAAVAMVKEVEDPEDSAKKLVGEAIKRGSADNITCVVVRFL 280
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0698300 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.728e-33 Identity = 74/127 (58.27%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 1965
LF GHGG RAAE+VKQNLF+NLI HPK SDTKSAI A+ Y TDSE LK+E SHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGG+
Sbjct: 95 LFGVFDGHGGARAAEFVKQNLFTNLIKHPKLFSDTKSAI-----------------------------------AETYTSTDSELLKAETSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGD 186 HSP 2 Score: 68.5514 bits (166), Expect = 7.611e-24 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 2
Query: 2654 VTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQVCVLSTII 2782
V +AGTWRVGGVLAVSRAFGD+LLKQYVVADPEI+ V+ + +
Sbjct: 212 VMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSL 254 HSP 3 Score: 66.2402 bits (160), Expect = 7.611e-24 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
AVSRDHKPDQ+DERQRIEDAGGFVMWAG
Sbjct: 189 AVSRDHKPDQSDERQRIEDAGGFVMWAG 216 HSP 4 Score: 84.7297 bits (208), Expect = 3.819e-16 Identity = 47/90 (52.22%), Postives = 55/90 (61.11%), Query Frame = 2
Query: 725 NGKFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDG----------IFTSFSHLHLHPRYVQ*TENMPKHCHMSNISVFFNLLT 964
NGKFSYGYASSPG+RSSMEDFY+TRIDGVDGE VGLFGVFDG F++L HP+ T++ + S S T
Sbjct: 60 NGKFSYGYASSPGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDSELLKAET 149 HSP 5 Score: 66.2402 bits (160), Expect = 4.647e-10 Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 3
Query: 3633 QEAVAMVKPIEDAAEAAKTLLIEASKRGSADNITCVVVRFL 3755
+EAVAMVKPI D+ +AAK LL EAS+RGSADNITC+VVRFL
Sbjct: 271 EEAVAMVKPILDSEQAAKKLLQEASQRGSADNITCLVVRFL 311
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0659500 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 7.587e-29 Identity = 68/127 (53.54%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 1965
LF GHGG + AEYVKQNLFS+L+ HPKFISDTK AI DAY TDSEFL+S+ S N+ GSTASTA+LVGDRL VANVGDSRA+ICRGGN
Sbjct: 58 LFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAI-----------------------------------DDAYKSTDSEFLESDSSQNQ-CGSTASTAVLVGDRLFVANVGDSRAIICRGGN 148 HSP 2 Score: 65.855 bits (159), Expect = 1.020e-21 Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 2
Query: 2651 IVTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQVCVLSTIIADIHSGIFHIVVED 2824
V +AGTWRVGGVLAVSRAFGD+LLKQYVV DPEI+ V+ HS F I+ D
Sbjct: 173 FVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVID------HSLEFLILASD 224 HSP 3 Score: 62.003 bits (149), Expect = 1.020e-21 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
AVS+DHKPDQTDERQRIEDAGGFVMWAG
Sbjct: 151 AVSKDHKPDQTDERQRIEDAGGFVMWAG 178 HSP 4 Score: 92.4337 bits (228), Expect = 5.538e-19 Identity = 48/89 (53.93%), Postives = 57/89 (64.04%), Query Frame = 2
Query: 719 SHNGKFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDG----------IFTSFSHLHLHPRYVQ*TENMPKHCHMSNISVFFN 955
S NGKFSYGYASSPG+R+SMEDFYETRID VDG+I+GLFGVFDG FSHL HP+++ T+ + S S F
Sbjct: 21 SQNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLE 109 HSP 5 Score: 59.3066 bits (142), Expect = 6.878e-8 Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 3
Query: 3621 LFSPQEAVAMVKPIEDAAEAAKTLLIEASKRGSADNITCVVVRFLMNQGT 3770
+ + +EAV M + I D EAAK LL EA KR S+DNITCVVVRFL QG+
Sbjct: 229 VVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVVVRFLHGQGS 278
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C13_ORYSJ (Probable protein phosphatase 2C member 13, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=PP2C13 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.093e-21 Identity = 56/127 (44.09%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 1965
LF GHGG RAAEY+K+NLF NL+ HP+F++DTK AI ++ Y TD++FL+SE + RD GSTASTA+LVG L VANVGDSRAV+ + G
Sbjct: 142 LFGVFDGHGGPRAAEYLKENLFENLLKHPEFLTDTKLAI-----------------------------------SETYQKTDTDFLESESNAFRDDGSTASTAVLVGGHLYVANVGDSRAVVSKAGK 233 HSP 2 Score: 62.3882 bits (150), Expect = 1.278e-16 Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = 2
Query: 2651 IVTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 2758
+V +AGTWRVGGVLA+SRAFG+RLLK +VVA+PEIQ
Sbjct: 258 VVIWAGTWRVGGVLAMSRAFGNRLLKPFVVAEPEIQ 293 HSP 3 Score: 48.1358 bits (113), Expect = 1.278e-16 Identity = 19/28 (67.86%), Postives = 26/28 (92.86%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
A+S DHKP+++DER+RIE+AGG V+WAG
Sbjct: 236 ALSEDHKPNRSDERKRIENAGGVVIWAG 263
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0587100 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.198e-20 Identity = 57/127 (44.88%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 1965
LF GHGG RAAEY+K++LF NL+ HP+F+++TK AI ++ Y TDSEFL SE +RD GSTASTA+LVG+ L VANVGDSRAVI + G
Sbjct: 260 LFGIFDGHGGSRAAEYLKEHLFENLMKHPEFMTNTKLAI-----------------------------------SETYKKTDSEFLDSESHTHRDDGSTASTAVLVGNHLYVANVGDSRAVISKAGK 351 HSP 2 Score: 67.781 bits (164), Expect = 2.758e-18 Identity = 30/36 (83.33%), Postives = 35/36 (97.22%), Query Frame = 2
Query: 2651 IVTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 2758
+V +AGTWRVGGVLA+SRAFG+RLLKQ+VVADPEIQ
Sbjct: 376 VVMWAGTWRVGGVLAMSRAFGNRLLKQFVVADPEIQ 411 HSP 3 Score: 48.521 bits (114), Expect = 2.758e-18 Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
A+S DHKP+++DER+RIE AGG VMWAG
Sbjct: 354 ALSEDHKPNRSDERKRIESAGGVVMWAG 381
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana OX=3702 GN=At1g43900 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.756e-19 Identity = 52/128 (40.62%), Postives = 64/128 (50.00%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNG 1968
F GHGG R AEY+K NLF NL+SH FISDTK AI + + TD E+L E ++AGSTA+TA L+GD+L+VANVGDSR V R G+
Sbjct: 154 FFGVFDGHGGARTAEYLKNNLFKNLVSHDDFISDTKKAI-----------------------------------VEVFKQTDEEYLIEEAGQPKNAGSTAATAFLIGDKLIVANVGDSRVVASRNGSA 246 HSP 2 Score: 62.7734 bits (151), Expect = 3.792e-18 Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 2
Query: 2651 IVTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQVCVLSTI 2779
+ +AGTWRVGG+LAVSRAFGD+ LK YV+A+PEIQ +ST+
Sbjct: 270 FIIWAGTWRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDISTL 312 HSP 3 Score: 52.7582 bits (125), Expect = 3.792e-18 Identity = 21/27 (77.78%), Postives = 26/27 (96.30%), Query Frame = 3
Query: 2499 VSRDHKPDQTDERQRIEDAGGFVMWAG 2579
+S DHKPD++DERQRIEDAGGF++WAG
Sbjct: 249 LSDDHKPDRSDERQRIEDAGGFIIWAG 275 HSP 4 Score: 58.9214 bits (141), Expect = 1.442e-7 Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 2
Query: 731 KFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDG 850
KFSYGY+S G+R++MED++ETRI V+G++V FGVFDG
Sbjct: 121 KFSYGYSSLKGKRATMEDYFETRISDVNGQMVAFFGVFDG 160
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0618200 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.420e-18 Identity = 53/127 (41.73%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 1585 LFITLSGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAICMLSSTVTA*YFYVMLSNFVNLESNFFPAGLFFSTADAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN 1965
LF GHGG AAE++K++LF NL+ HP FI+DTKSAI ++ Y TDS+FL +E + NR+ GSTASTAI VG+ + VANVGDSR V+ + G
Sbjct: 146 LFGIFDGHGGSHAAEHLKKHLFENLLKHPSFITDTKSAI-----------------------------------SETYRKTDSDFLDAETNINREDGSTASTAIFVGNHIYVANVGDSRTVMSKAGK 237 HSP 2 Score: 62.7734 bits (151), Expect = 9.575e-16 Identity = 26/36 (72.22%), Postives = 35/36 (97.22%), Query Frame = 2
Query: 2651 IVTFAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQ 2758
+VT++GTWRVGGVLA+SRAFG+R LK++VVA+PE+Q
Sbjct: 262 VVTWSGTWRVGGVLAMSRAFGNRFLKRFVVAEPEVQ 297 HSP 3 Score: 44.669 bits (104), Expect = 9.575e-16 Identity = 18/28 (64.29%), Postives = 24/28 (85.71%), Query Frame = 3
Query: 2496 AVSRDHKPDQTDERQRIEDAGGFVMWAG 2579
A+S DHKP++ DER+RIE+AGG V W+G
Sbjct: 240 ALSSDHKPNRKDERKRIENAGGVVTWSG 267 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_30683 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_30683_La_Tanjil_v1.0 ID=rna-TanjilR_30683_La_Tanjil_v1.0; Name=rna-TanjilR_30683; organism=Lupinus angustifolius; type=mRNA; length=3836bpback to top protein sequence of rna-TanjilR_30683_La_Tanjil_v1.0 >rna-TanjilR_30683_La_Tanjil_v1.0 ID=rna-TanjilR_30683_La_Tanjil_v1.0; Name=rna-TanjilR_30683_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=307bpback to top mRNA from alignment at Chr_LG03-CM007363.1:23535824..23539659+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_30683_La_Tanjil_v1.0 ID=rna-TanjilR_30683_La_Tanjil_v1.0; Name=rna-TanjilR_30683; organism=Lupinus angustifolius; type=mRNA; length=3836bp; location=Sequence derived from: Chr_LG03-CM007363.1:23535824..23539659+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:23535824..23539659+ >rna-TanjilR_30683_La_Tanjil_v1.0 ID=rna-TanjilR_30683_La_Tanjil_v1.0; Name=rna-TanjilR_30683; organism=Lupinus angustifolius; type=CDS; length=924bp; location=Sequence derived from: Chr_LG03-CM007363.1:23535824..23539659+ (Lupinus angustifoliusback to top |