rna-TanjilR_30590

Transcript Overview
Namerna-TanjilR_30590
Unique Namerna-TanjilR_30590_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1302
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG03-CM007363.1supercontigChr_LG03-CM007363.1:24371308..24372609 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL093Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL270Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL294Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL367Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR526Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0869Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0884Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0929Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR0915Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0928Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR0739Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0754Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0988Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0998Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR0791Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0794Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR0877Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0878Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0905Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0613Pisum sativum Cameor genome v1aPisum sativum
anpsR0619Pisum sativum Cameor genome v1aPisum sativum
anpsR0651Pisum sativum Cameor genome v1aPisum sativum
anpvR0827Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0850Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0857Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0895Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0899Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0720Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0729Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0750Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0754Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0761Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0820Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0824Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0870Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0873Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0704Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0742Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0711Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0714Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0739Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0734Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0737Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0744Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0745Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0750Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0759Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0766Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0775Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0680Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0700Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0719Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0723Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0690Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0709Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0734Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0735Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0831Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0837Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0840Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0867Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0868Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0884Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0891Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0679Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0692Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0727Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0730Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0735Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0784Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0798Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0818Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0827Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0829Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0719Cicer arietinum
ancarR0741Cicer arietinum
ancarR0765Cicer arietinum
ancarR0767Cicer arietinum
ancarR0771Cicer arietinum
anccaR0705Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0736Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0800Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0813Vigna umbellata FF25 genome v1.0Vigna umbellata
anccaR0762Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0765Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0830Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0831Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0838Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0762Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0791Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0793Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0816Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR0808Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0818Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0815Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0825Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0831Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0833Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0843Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0844Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0840Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0852Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR0696Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0869Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0716Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0719Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0727Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0890Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0899Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0935Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0938Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigun08g025300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun08g025300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.03G171300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan09g015900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014648043.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_03G01899.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va07G068250.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_02G00388.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_09277Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr08.491Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_030161Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_02789.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_14889.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun09g237600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigst.02G037800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.02G045300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat05G0146000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_014644455.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va04G068020.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.001G022900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg54940.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004501503.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan07g270300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun09g237600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr01.161Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr09.1000427Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_15312.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.03G269600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Phvul.009G065800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_09809Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_30590gene-TanjilG_30590_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_30590rna-TanjilR_30590_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_30590_La_Tanjil_v1.0rna-TanjilR_30590_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_30590_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:24371308..24371559rna-TanjilR_30590_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:24371308..24371559Lupinus angustifoliusexon
rna-TanjilR_30590_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:24371776..24372609rna-TanjilR_30590_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:24371776..24372609Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_30590_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:24371308..24371559rna-TanjilR_30590_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:24371308..24371559Lupinus angustifoliusCDS
rna-TanjilR_30590_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:24371776..24372609rna-TanjilR_30590_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:24371776..24372609Lupinus angustifoliusCDS


Homology
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana OX=3702 GN=HSFB4 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.613e-46
Identity = 143/285 (50.18%), Postives = 165/285 (57.89%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTAQ--PQQVS--TTHHHD-SSLGINVPSFFPFTSRVSISPPYDSDEQPNWC-DSPPPTSLINVGAANYNSSVTAXXXXXXXXXXXXXXXXXXXAHMKKLYNDIIYFVQNHVKHVAPSNTYS-PSSFLPCNAPXXXXXXXXXXXXRPMNQLLGYYSTTTNPKQSFXXXXXXXXXXXXHTLNSPINTSRGSVTVVEG------HSSNTSKTKLFGVFL-QSKKRVHPEYGSNFINSETNKTRLVLEKDDLGLNLM 1281
            GFRKIVPDRWEFANE FK+GEKHLLCEIHRRKT+Q  PQQ S   +HHH    +  +  SFFP       +P    +E   WC DSPP    +     +  + VTALSEDNERLRR+N +LMSELAHMKKLYNDIIYFVQNHVK VAPSN  S  SSFL     QQ                L YY+T T                  + LNS   TS+ S+TV+E         SN  KTKLFGV L  SKKR H        + +T+KTRLVL++ DL LNLM
Sbjct:   94 GFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTSQMIPQQHSPFMSHHHAPPQIPFSGGSFFPLPPPRVTTP----EEDHYWCDDSPPSRPRVIPQQIDTAAQVTALSEDNERLRRSNTVLMSELAHMKKLYNDIIYFVQNHVKPVAPSNNSSYLSSFLQKQQQQQPPT-------------LDYYNTAT------------VNATNLNALNSSPPTSQSSITVLEDDHTNHHDQSNMRKTKLFGVSLPSSKKRSH------HFSDQTSKTRLVLDQSDLALNLM 343          

HSP 2 Score: 136.732 bits (343), Expect = 3.537e-35
Identity = 67/93 (72.04%), Postives = 75/93 (80.65%), Query Frame = 1
Query:    1 MALLLDNNC--------ESILFPLDS-NKTVPAPFLTKTYQLVDDPATDHIVSWGQDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            MA++++N+         E I   ++   K VPAPFLTKTYQLVDDPATDH+VSWG DDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY
Sbjct:    1 MAMMVENSYGGYGGGGGERIQLMVEGQGKAVPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 93          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HFB4B_ORYSJ (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4B PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.466e-35
Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = 1
Query:   58 KTVPAPFLTKTYQLVDDPATDHIVSWGQDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            K VPAPFLTKTYQLVDDP TDHIVSWG+DDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY
Sbjct:   29 KPVPAPFLTKTYQLVDDPCTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 93          

HSP 2 Score: 79.7221 bits (195), Expect = 3.099e-15
Identity = 67/139 (48.20%), Postives = 82/139 (58.99%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTAQPQQVSTTHHHDSSLGINVPSFFPFTSRVSISPPYDSDEQPNWCDSPPPTSLINVGAANYNSS---VTAXXXXXXXXXXXXXXXXXXXAHMKKLYNDIIYFVQNH 876
            GFRKIV DRWEFANE F+KG KHLL EIHRRK++QP               +     PF    S+ PP  +    +     P T+     A +       + ALSEDN +LRR N++L+SELAHMKKLYNDIIYF+QNH
Sbjct:   94 GFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPPPPPMP----HQPYHHHHHLNPF----SLPPPPPAYHHHHLIQEEPATTAHCTVAGDGGEGGDFLAALSEDNRQLRRRNSLLLSELAHMKKLYNDIIYFLQNH 224          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4D PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.691e-29
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = 1
Query:   76 FLTKTYQLVDDPATDHIVSWGQDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            FL+KTYQLVDDP+TD +VSWG+D+ TFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY
Sbjct:   37 FLSKTYQLVDDPSTDDVVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 95          

HSP 2 Score: 85.1149 bits (209), Expect = 3.903e-17
Identity = 68/142 (47.89%), Postives = 83/142 (58.45%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTAQPQQVSTTH----HHDSSLGINVPSFFPFTSRVSISPPYDSDEQPNWCDSPPPTSLINVGAANYNSSVTAXXXXXXXXXXXXXXXXXXXAHMKKLYNDIIYFVQNHVK 882
            GFRKIV DRWEFANE F+KG KHLL EIHRRK++   Q         H    L +  P   P +  V  +       Q  +C SP         A      + ALSEDN +LRR N++L+SELAHM+KLYNDIIYF+QNHV+
Sbjct:   96 GFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQHYPLSLFSPPTTPRSPPVGAAAAAAYHFQEEYCSSPADY------AGGGGDLLAALSEDNRQLRRRNSLLLSELAHMRKLYNDIIYFLQNHVE 231          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HFB4C_ORYSJ (Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4C PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.411e-29
Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 1
Query:   73 PFLTKTYQLVDDPATDHIVSWGQDD-TTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            PFLTKTYQLVDDPATDHIVSWG D  +TFVVWRPPEFARD+LPNYFKHNNFSSFVRQLNTY
Sbjct:   24 PFLTKTYQLVDDPATDHIVSWGDDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTY 84          

HSP 2 Score: 82.4185 bits (202), Expect = 8.331e-16
Identity = 73/182 (40.11%), Postives = 91/182 (50.00%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTA----------------------QPQQVSTTHHHD--------SSLGINVPSFFPFTSRVSISPPYDSDEQPNWCDS--PPPTSLINVGAANYNSS------------VTAXXXXXXXXXXXXXXXXXXXAHMKKLYNDIIYFVQNHVK 882
            GFRK+VP+RWEFANE F+KGEK LL EIHRRKT+                       P   +  HHH         ++ GI +P  FP               QP+W +   P  T L+ +G    + S               L E+NERLRR+N  L+ ELAHM+KLYNDIIYFVQNHV+
Sbjct:   85 GFRKVVPERWEFANEFFRKGEKQLLTEIHRRKTSSASTASPSPPPFFAPPHFPLFHHPGVAAAQHHHAFVGDDGVVAAHGIGMP--FP---------------QPHWREPNLPVATRLLALGGPAPSPSSAEAGGAGRAATAAVLMEENERLRRSNTALLQELAHMRKLYNDIIYFVQNHVR 249          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana OX=3702 GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.606e-29
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 1
Query:   49 DSNKTVPAPFLTKTYQLVDDPATDHIVSWGQDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            DS +++P PFLTKTYQLV+DP  D ++SW +D TTF+VWRP EFARDLLP YFKHNNFSSFVRQLNTY
Sbjct:   51 DSQRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTY 118          

HSP 2 Score: 60.4622 bits (145), Expect = 1.218e-8
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTAQP 576
            GFRK+VPDRWEF+N+ FK+GEK LL +I RRK +QP
Sbjct:  119 GFRKVVPDRWEFSNDCFKRGEKILLRDIQRRKISQP 154          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.846e-28
Identity = 53/66 (80.30%), Postives = 57/66 (86.36%), Query Frame = 1
Query:   55 NKTVPAPFLTKTYQLVDDPATDHIVSWGQDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
             +TVP PFLTKTYQLVDDPA D ++SW  D +TFVVWRP EFARDLLP YFKHNNFSSFVRQLNTY
Sbjct:   42 QRTVPTPFLTKTYQLVDDPAVDDVISWNDDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTY 107          

HSP 2 Score: 69.3218 bits (168), Expect = 1.428e-11
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTAQPQQVSTTHHHDSSLGINVPSFFPFTSRVSISPPYDSDEQ 690
            GFRKIVPDRWEFAN+ F++GE+ LLCEIHRRK   P   +TT    ++    +P   P T+    SP    +EQ
Sbjct:  108 GFRKIVPDRWEFANDCFRRGERRLLCEIHRRKVTPPAPAATTAAVAAA----IPMALPVTTTRDGSPVLSGEEQ 177          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2C PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.065e-27
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 1
Query:   46 LDSNKTVPAPFLTKTYQLVDDPATDHIVSWGQDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            L   +++P PFLTKTYQLV+DPA D ++SW +D +TFVVWRP EFARDLLP YFKHNNFSSFVRQLNTY
Sbjct:   29 LAGQRSLPTPFLTKTYQLVEDPAVDDVISWNEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTY 97          

HSP 2 Score: 65.855 bits (159), Expect = 2.832e-10
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRK 564
            GFRKIVPDRWEFAN+ F++GEK LLC+IHRRK
Sbjct:   98 GFRKIVPDRWEFANDCFRRGEKRLLCDIHRRK 129          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum OX=4082 GN=HSF24 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.763e-27
Identity = 50/67 (74.63%), Postives = 56/67 (83.58%), Query Frame = 1
Query:   52 SNKTVPAPFLTKTYQLVDDPATDHIVSWGQDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            S +T PAPFL KTYQLVDD ATD ++SW +  TTFVVW+  EFA+DLLP YFKHNNFSSFVRQLNTY
Sbjct:    2 SQRTAPAPFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTY 68          

HSP 2 Score: 59.6918 bits (143), Expect = 1.294e-8
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRKT 567
            GFRKIVPD+WEFANE FK+G+K LL  I RRKT
Sbjct:   69 GFRKIVPDKWEFANENFKRGQKELLTAIRRRKT 101          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HFB4A_ORYSJ (Putative heat stress transcription factor B-4a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4A PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.690e-26
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 1
Query:   76 FLTKTYQLVDDPATDHIVSWGQDD-----TTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            FLTKTYQLVDDPATDH+VSW  DD     ++FVVWRPPEFARD+LPNYFKH+NFSSFVRQLNTY
Sbjct:   26 FLTKTYQLVDDPATDHVVSWEDDDGGESASSFVVWRPPEFARDILPNYFKHSNFSSFVRQLNTY 89          

HSP 2 Score: 70.8626 bits (172), Expect = 4.241e-12
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 1
Query:  469 GFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTA 570
            GFRK+VP+RWEFANE F+KGEK LLCEIHRRK+A
Sbjct:   90 GFRKVVPERWEFANEFFRKGEKQLLCEIHRRKSA 123          
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana OX=3702 GN=HSFB1 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.394e-26
Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = 1
Query:   52 SNKTVPAPFLTKTYQLVDDPATDHIVSWGQDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTY 252
            + ++VPAPFL+KTYQLVDD +TD +VSW ++ T FVVW+  EFA+DLLP YFKHNNFSSF+RQLNTY
Sbjct:    7 AQRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTY 73          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_30590 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
HSFB4_ARATH1.613e-4650.18Heat stress transcription factor B-4 OS=Arabidopsi... [more]
HFB4B_ORYSJ1.466e-3595.38Heat stress transcription factor B-4b OS=Oryza sat... [more]
HFB4D_ORYSJ2.691e-2988.14Heat stress transcription factor B-4d OS=Oryza sat... [more]
HFB4C_ORYSJ5.411e-2991.80Heat stress transcription factor B-4c OS=Oryza sat... [more]
HFB2B_ARATH5.606e-2975.00Heat stress transcription factor B-2b OS=Arabidops... [more]
HFB2B_ORYSJ1.846e-2880.30Heat stress transcription factor B-2b OS=Oryza sat... [more]
HFB2C_ORYSJ1.065e-2773.91Heat stress transcription factor B-2c OS=Oryza sat... [more]
HSF24_SOLPE6.763e-2774.63Heat shock factor protein HSF24 OS=Solanum peruvia... [more]
HFB4A_ORYSJ1.690e-2681.25Putative heat stress transcription factor B-4a OS=... [more]
HSFB1_ARATH2.394e-2670.15Heat stress transcription factor B-1 OS=Arabidopsi... [more]
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..296
IPR000232Heat shock factor (HSF)-type, DNA-bindingPRINTSPR00056HSFDOMAINcoord: 26..49
score: 46.19
coord: 64..76
score: 78.68
coord: 77..89
score: 84.62
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 22..115
e-value: 7.6E-60
score: 214.8
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 26..115
e-value: 1.3E-29
score: 102.6
IPR000232Heat shock factor (HSF)-type, DNA-bindingPROSITEPS00434HSF_DOMAINcoord: 65..89
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 17..117
e-value: 8.5E-38
score: 130.9
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 23..115

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_30590_La_Tanjil_v1.0 ID=rna-TanjilR_30590_La_Tanjil_v1.0; Name=rna-TanjilR_30590; organism=Lupinus angustifolius; type=mRNA; length=1302bp
ATGGCTCTTCTTCTAGACAATAACTGTGAAAGCATTTTATTCCCTCTTGA
TTCCAACAAAACCGTACCTGCTCCATTCCTCACCAAAACATACCAACTCG
TCGATGATCCAGCCACCGATCACATCGTTTCTTGGGGCCAAGACGACACC
ACTTTCGTTGTTTGGCGTCCACCTGAGTTCGCCAGAGATCTTCTCCCTAA
CTACTTCAAACACAACAACTTCTCTAGCTTCGTTCGACAGCTCAATACAT
ATGTAAGTCAAATATACCCACAAATTACCCACAAATATGTGGTACACTGA
AATTAGTAAGAAGATGAAACATGTAACTATTTATATAAAgcttttttttc
ctctcataAACTTAGAAAGGGACCATAATATTGTGTTTGTGTTTTATCgt
atttatatattgttctaGCTTCTGagttttaattctttttactttgtttg
aaatataatatgaattaGGGTTTTAGAAAGATTGTACCAGACAGATGGGA
GTTTGCGAATGAATTATTCAAGAAAGGAGAGAAGCACTTGCTATGTGAGA
TTCATAGAAGAAAAACGGCGCAGCCTCAACAAGTTTCCACGACCCATCAT
CATGATTCTTCACTAGGAATCAACGTTCCTTCTTTCTTTCCCTTCACCAG
TAGAGTCAGCATTTCTCCACCCTATGACTCCGATGAACAACCCAATTGGT
GTGACTCTCCGCCACCCACTTCACTCATCAACGTAGGTGCTGCTAACTAT
AACAGTTCGGTTACGGCGCTATCCGAGGATAATGAAAGGCTTAGGAGGAA
TAATAATATGCTTATGTCGGAACTTGCACACATGAAGAAGCTTTATAATG
ACATCATCTACTTTGTTCAGAACCATGTCAAGCATGTAGCTCCTAGTAAC
ACTTACTCACCTTCTTCTTTTCTACCTTGCAATGCACCACAGCAACAAGT
AGCTTCTAATGTTTCAGTGGTGCAAAGGCCAATGAACCAGCTTTTGGGTT
ATTATTCTACTACCACAAACCCTAAGCAATCATTtcaacctcaacctcaa
cctcaacctcaagCACAAGCACATACTTTGAACTCTCCCATCAACACTTC
AAGGGGTTCAGTGACTGTAGTTGAAGGGCATAGTAGTAATACCAGCAAGA
CTAAGCTTTTTGGAGTGTTCCTACAATCCAAGAAAAGGGTGCACCCTGAG
TATGGTTCTAATTTTATTAATTCAGAGACCAACAAGACTCGTTTGGTTTT
GGAAAAAGATGACTTGGGCTTGAATCTCATGCCTCCTAATTCTTCTTATT
AG
back to top

protein sequence of rna-TanjilR_30590_La_Tanjil_v1.0

>rna-TanjilR_30590_La_Tanjil_v1.0 ID=rna-TanjilR_30590_La_Tanjil_v1.0; Name=rna-TanjilR_30590_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=361bp
MALLLDNNCESILFPLDSNKTVPAPFLTKTYQLVDDPATDHIVSWGQDDT
TFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEL
FKKGEKHLLCEIHRRKTAQPQQVSTTHHHDSSLGINVPSFFPFTSRVSIS
PPYDSDEQPNWCDSPPPTSLINVGAANYNSSVTALSEDNERLRRNNNMLM
SELAHMKKLYNDIIYFVQNHVKHVAPSNTYSPSSFLPCNAPQQQVASNVS
VVQRPMNQLLGYYSTTTNPKQSFQPQPQPQPQAQAHTLNSPINTSRGSVT
VVEGHSSNTSKTKLFGVFLQSKKRVHPEYGSNFINSETNKTRLVLEKDDL
GLNLMPPNSSY
back to top

mRNA from alignment at Chr_LG03-CM007363.1:24371308..24372609+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_30590_La_Tanjil_v1.0 ID=rna-TanjilR_30590_La_Tanjil_v1.0; Name=rna-TanjilR_30590; organism=Lupinus angustifolius; type=mRNA; length=1302bp; location=Sequence derived from: Chr_LG03-CM007363.1:24371308..24372609+ (Lupinus angustifolius
ATGGCTCTTCTTCTAGACAATAACTGTGAAAGCATTTTATTCCCTCTTGA TTCCAACAAAACCGTACCTGCTCCATTCCTCACCAAAACATACCAACTCG TCGATGATCCAGCCACCGATCACATCGTTTCTTGGGGCCAAGACGACACC ACTTTCGTTGTTTGGCGTCCACCTGAGTTCGCCAGAGATCTTCTCCCTAA CTACTTCAAACACAACAACTTCTCTAGCTTCGTTCGACAGCTCAATACAT ATGTAAGTCAAATATACCCACAAATTACCCACAAATATGTGGTACACTGA AATTAGTAAGAAGATGAAACATGTAACTATTTATATAAAgcttttttttc ctctcataAACTTAGAAAGGGACCATAATATTGTGTTTGTGTTTTATCgt atttatatattgttctaGCTTCTGagttttaattctttttactttgtttg aaatataatatgaattaGGGTTTTAGAAAGATTGTACCAGACAGATGGGA GTTTGCGAATGAATTATTCAAGAAAGGAGAGAAGCACTTGCTATGTGAGA TTCATAGAAGAAAAACGGCGCAGCCTCAACAAGTTTCCACGACCCATCAT CATGATTCTTCACTAGGAATCAACGTTCCTTCTTTCTTTCCCTTCACCAG TAGAGTCAGCATTTCTCCACCCTATGACTCCGATGAACAACCCAATTGGT GTGACTCTCCGCCACCCACTTCACTCATCAACGTAGGTGCTGCTAACTAT AACAGTTCGGTTACGGCGCTATCCGAGGATAATGAAAGGCTTAGGAGGAA TAATAATATGCTTATGTCGGAACTTGCACACATGAAGAAGCTTTATAATG ACATCATCTACTTTGTTCAGAACCATGTCAAGCATGTAGCTCCTAGTAAC ACTTACTCACCTTCTTCTTTTCTACCTTGCAATGCACCACAGCAACAAGT AGCTTCTAATGTTTCAGTGGTGCAAAGGCCAATGAACCAGCTTTTGGGTT ATTATTCTACTACCACAAACCCTAAGCAATCATTtcaacctcaacctcaa cctcaacctcaagCACAAGCACATACTTTGAACTCTCCCATCAACACTTC AAGGGGTTCAGTGACTGTAGTTGAAGGGCATAGTAGTAATACCAGCAAGA CTAAGCTTTTTGGAGTGTTCCTACAATCCAAGAAAAGGGTGCACCCTGAG TATGGTTCTAATTTTATTAATTCAGAGACCAACAAGACTCGTTTGGTTTT GGAAAAAGATGACTTGGGCTTGAATCTCATGCCTCCTAATTCTTCTTATT AG
back to top

Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:24371308..24372609+

>rna-TanjilR_30590_La_Tanjil_v1.0 ID=rna-TanjilR_30590_La_Tanjil_v1.0; Name=rna-TanjilR_30590; organism=Lupinus angustifolius; type=CDS; length=1086bp; location=Sequence derived from: Chr_LG03-CM007363.1:24371308..24372609+ (Lupinus angustifolius
ATGGCTCTTCTTCTAGACAATAACTGTGAAAGCATTTTATTCCCTCTTGA
TTCCAACAAAACCGTACCTGCTCCATTCCTCACCAAAACATACCAACTCG
TCGATGATCCAGCCACCGATCACATCGTTTCTTGGGGCCAAGACGACACC
ACTTTCGTTGTTTGGCGTCCACCTGAGTTCGCCAGAGATCTTCTCCCTAA
CTACTTCAAACACAACAACTTCTCTAGCTTCGTTCGACAGCTCAATACAT
ATGGTTTTAGAAAGATTGTACCAGACAGATGGGAGTTTGCGAATGAATTA
TTCAAGAAAGGAGAGAAGCACTTGCTATGTGAGATTCATAGAAGAAAAAC
GGCGCAGCCTCAACAAGTTTCCACGACCCATCATCATGATTCTTCACTAG
GAATCAACGTTCCTTCTTTCTTTCCCTTCACCAGTAGAGTCAGCATTTCT
CCACCCTATGACTCCGATGAACAACCCAATTGGTGTGACTCTCCGCCACC
CACTTCACTCATCAACGTAGGTGCTGCTAACTATAACAGTTCGGTTACGG
CGCTATCCGAGGATAATGAAAGGCTTAGGAGGAATAATAATATGCTTATG
TCGGAACTTGCACACATGAAGAAGCTTTATAATGACATCATCTACTTTGT
TCAGAACCATGTCAAGCATGTAGCTCCTAGTAACACTTACTCACCTTCTT
CTTTTCTACCTTGCAATGCACCACAGCAACAAGTAGCTTCTAATGTTTCA
GTGGTGCAAAGGCCAATGAACCAGCTTTTGGGTTATTATTCTACTACCAC
AAACCCTAAGCAATCATTtcaacctcaacctcaacctcaacctcaagCAC
AAGCACATACTTTGAACTCTCCCATCAACACTTCAAGGGGTTCAGTGACT
GTAGTTGAAGGGCATAGTAGTAATACCAGCAAGACTAAGCTTTTTGGAGT
GTTCCTACAATCCAAGAAAAGGGTGCACCCTGAGTATGGTTCTAATTTTA
TTAATTCAGAGACCAACAAGACTCGTTTGGTTTTGGAAAAAGATGACTTG
GGCTTGAATCTCATGCCTCCTAATTCTTCTTATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus