LR48_mrnaVigan04g215300

Transcript Overview
NameLR48_mrnaVigan04g215300
Unique NameLR48_mrnaVigan04g215300_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length4712
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_4-CM003374.1supercontigChr_4-CM003374.1:30763801..30768512 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR536Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR548Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR553Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR597Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL046Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0053Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0055Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0277Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0368Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0422Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0840Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0853Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1005Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1090Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1094Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR636Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR642Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR655Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR728Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0790Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0826Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR614Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR615Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR634Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR676Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR537Pisum sativum Cameor genome v1aPisum sativum
aspsR578Pisum sativum Cameor genome v1aPisum sativum
aspvR591Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR595Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR611Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR644Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR493Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR513Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR532Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR538Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR567Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR575Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR576Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR592Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR618Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR579Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR589Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR590Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR606Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR468Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR488Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR506Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR522Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR604Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR614Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR620Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR652Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR664Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR462Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR487Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR489Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR512Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR484Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR493Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR500Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_13993Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.2g150560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr09.1641.1.62113178Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_15031.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun09g206500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg55447.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_03013.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004501241.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat5g027320.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.009G095900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_042307Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014646331.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.2g186640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_01784Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan04g215300gene-LR48_Vigan04g215300_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g215300LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30763801..30763803LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30763801..30763803Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30763801..30763842LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30763801..30763842Vigna angularisexon
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30763939..30764103LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30763939..30764103Vigna angularisexon
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764318..30764468LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764318..30764468Vigna angularisexon
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764686..30764954LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764686..30764954Vigna angularisexon
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30765458..30765749LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30765458..30765749Vigna angularisexon
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30766387..30766679LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30766387..30766679Vigna angularisexon
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30767193..30767471LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30767193..30767471Vigna angularisexon
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30767659..30767943LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30767659..30767943Vigna angularisexon
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30768357..30768512LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30768357..30768512Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30763843..30763938LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30763843..30763938Vigna angularisintron
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764104..30764317LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764104..30764317Vigna angularisintron
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764469..30764685LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764469..30764685Vigna angularisintron
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764955..30765457LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30764955..30765457Vigna angularisintron
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30765750..30766386LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30765750..30766386Vigna angularisintron
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30766680..30767192LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30766680..30767192Vigna angularisintron
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30767472..30767658LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30767472..30767658Vigna angularisintron
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30767944..30768356LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30767944..30768356Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS2143CDS2143_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30768510..30768512LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:30768510..30768512Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS_ARATH (1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DXS PE=1 SV=2)

HSP 1 Score: 788.104 bits (2034), Expect = 0.000e+0
Identity = 393/640 (61.41%), Postives = 488/640 (76.25%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIE-ESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGD-GIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREAL 1911
            +  P+ +KNLS+KELKQL+ E+RSD+   +S+T     +S+ VVELTVA+HY+FN P DKILWDVG Q+Y HKILTGRR  M T+++ NGLSGFT R ESE+D FG GH   +ISAGLGMAV RD+KG+   VVAVI +    AGQAYEAM+NAGYLDS+M+VILND++   LP    + P   V ALSS LS+LQS+ + R  RE AKG+TK+IG  MH+LAAKVDEYARGMI   GS+LFEELGLYYIGPVDGHN++DL+ +L+EV S  + GPVL+HV+T++ +G    +++D    K  G + FDP          + Q+Y   F E LVAEAE DKD+V +HA M   + L LFQ +FP R FDVG+AEQHAVTFA+GLAC GLKPFC I SSF+QRAYDQV+HDVD Q++PVRF +  AGLVG+DGP  CGAFD+TFM+CLPNMIVMAPSDE +L +MVATA  I+D+P+CFRYPRG  +G     G+ G+PI+IG+GRIL EG+ VA LGYGS VQ+CL A  +L + G+ VTVADARFCKPLD  L+R L K H  LITVEEGSIGGFGSHV +F+A++GLLDG++KWRP+VLPDRYI+H +P +QL +AGL   HIAATAL+L+G  REAL
Sbjct:   80 INYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADD---KYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=TKT2 PE=2 SV=1)

HSP 1 Score: 787.334 bits (2032), Expect = 0.000e+0
Identity = 399/643 (62.05%), Postives = 491/643 (76.36%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIE-ESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGD-GIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALQFM 1920
            +  P+ +KNLS+KELKQLA E+RSD    +S+T     +S+ VVELTVA+HYVFNAP D+ILWDVG Q+Y HKILTGRR  M+T+++ NGL+GFT R ESEYD FG GH   +ISAGLGMAV RD+KGR   V+AVI +    AGQAYEAM+NAGYLDS+M+VILND+R   LP    + P   V ALSS LS+LQS++  R  RE AKGVTK+IG  MHELAAKVDEYARGMI   GSTLFEELGLYYIGPVDGHN++DLI +L+EV S  + GPVL+HV+T++ +G    +++     K  G   FDP          + Q+Y   F E L+AEAE DKDIV +HA M   + + LF  +FP R FDVG+AEQHAVTFA+GLAC GLKPFC I SSF+QRAYDQV+HDVD Q++PVRF +  AGLVG+DGP  CGAFD+TFM+CLPNM+VMAPSDE EL H+VATA  I+D+P+CFRYPRG  +G     G+ GIP+++G+GRILVEG+ VA LGYGS VQNCL A S+L   G++VTVADARFCKPLD  L+R L K H  L+TVE+GSIGGFGSHV +F+A++GLLDG++KWRPIVLPDRYI+H SP +QL +AGL+  HIAAT  ++LG+TREAL+ M
Sbjct:   79 INYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAAD---KYHGVAKFDPATGKQFKGSAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREALEVM 718          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS1_ORYSJ (1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLA1 PE=2 SV=2)

HSP 1 Score: 777.319 bits (2006), Expect = 0.000e+0
Identity = 389/643 (60.50%), Postives = 486/643 (75.58%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIE-ESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGG-DGIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALQFM 1920
            V  P+ +KNLS+KEL+QLA E+RSD+   +S+T     +S+ VVELTVA+HYVFN P DKILWDVG Q+Y HKILTGRR  M T+++ NGLSGFT R ESEYD+FG GH   +ISA LGMAV RD+KG +  VVAVI +    AGQAYEAM+NAGYLDS+M+VILND++   LP    + P   V ALSS LSKLQSS+  R  RE AKGVTK+IG  +HELAAKVDEYARGMI   GSTLFEELGLYYIGPVDGHN++DLI +L+EV S  + GPVL+HV+T++ +G    +++     K  G   FDP       +  +  +Y + F E L+AEAE+D  +V +HA M   + L  F  +FP+R FDVG+AEQHAVTFA+GLAC GLKPFC I SSFLQR YDQV+HDVD Q++PVRF +  AGLVG+DGP  CGAFD+T+M+CLPNM+VMAPSDE EL HMVATA  I+D+P+CFRYPRG  +G        G+P+++G+GR+L+EG+ VA LGYGS VQ CL A SL+ + G++VTVADARFCKPLD  L+R+L   H  L+TVEEGSIGGFGSHVA+F+A++GLLDG++KWRP+VLPDRYI+H SP +QL +AGL+  HIAAT  ++LG+ REAL  M
Sbjct:   76 VNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAAD---KYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIM 715          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS2_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190000 PE=2 SV=1)

HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0
Identity = 366/642 (57.01%), Postives = 469/642 (73.05%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIE-ESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGG-DGIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALQF 1917
            V  P+ +KNLS  EL+QLA E+R+++   +S+T     +S+ VVEL VA+H+VF+ P DKI+WDVG Q Y HKILTGRRS M T+++ +GL+GF  R ES +DAFGAGH   SISA LGMAVARD+ G++  V++VI +    AGQAYEAM+N+GYLDSNM+V+LND++   LP    + P T V ALS  L+KLQSS   RR REAAK VTK+IG   HE+AAKVDEYARGM+   GSTLFEELGLYYIGPVDGH+V+DL+ +  +V S+ + GPVLVH++T++ +G      ++    +  G + FDP       +     +Y   F E L+ EAE D  +V +HA M   + L  F ++FP+R FDVG+AEQHAVTFA+GLA  GLKPFC I SSFLQR YDQV+HDVD QR+PVRF +  AGLVG+DGP  CGAFD+ +M+CLPNM+VMAP+DE ELMHMVATA  I+D+P+CFR+PRG  +G        G P+++G+GR+LV G  VA LGYG+MVQ C+KA   L + GI VTVADARFCKPLD  L+R+L   H  L+TVEEGSIGGFGSHVA +++++GLLDG +K R + LPDRYI+H +P +QL++AGL+  HIAAT LSLLGR  EALQ 
Sbjct:   74 VNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVELAVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAKVDEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKGKG---YPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMVQACMKAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAHYLSLSGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPLEALQL 712          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS_RHOPB (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=dxs PE=3 SV=1)

HSP 1 Score: 575.089 bits (1481), Expect = 0.000e+0
Identity = 303/635 (47.72%), Postives = 416/635 (65.51%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARG-MIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGD-GIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGR 1896
            +  P  L+ L I +++Q+A E+R +    +S T     A + VVELT AIHYVF+ P D+++WDVG Q Y HKILTGRR  + T++   GLSGFT R ES+YD FGA H   SISAGLGMAVARD+ G +  V+AVI + +  AG AYEAM+NAG ++S ++VILND+  S+ P         V A+S+ LS+L S K++R  REA K + K +   + + AA+ +EY+RG M+G  G TLFEELG YY+GPVDGHN++ L+ +LQ V   D+ GP L+HV+T + +G      ++    K    + FD              +Y + F ++LV EA+KD  IV + A M   + +++F++ FP R FDVG+AEQHAVTFA+GLA  G KPFC I S+FLQR YDQV+HDV  Q +PVRF I  AGLVG+DG    G+FD  F+ CLPNM++MA SDE EL+HMVAT   IND+P+  RYPRG   G+G    + GI ++IG+GRI+ EG  +A L +G+ +  C KA   LA LG+  T+ADARF KPLD++L+ +L + H  L+T+EEGSIGGFGSHV + +A +G+LDG ++ R +VLPD +++H +P     +AGL    I       LG+
Sbjct:   13 IRTPADLRKLRIDQVRQVADELRQETIEAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLAGGKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP--------PVGAMSAYLSRLYSGKTYRTLREAGKQIGKHLPKLIADRAARAEEYSRGFMMG--GGTLFEELGFYYVGPVDGHNLDHLLPILQNVRDADT-GPFLIHVVTQKGKG---YGPAEAASDKYHAVVKFDIATGAQAKAKSNAPSYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPTRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAASDEAELVHMVATQVAINDRPSAVRYPRGE--GRGVEMPEVGIALEIGKGRIVREGNKIALLSFGTRLAECEKAADELATLGLSTTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPTAMYARAGLDAKGIVKKVFEALGK 631          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS_RHOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) OX=316057 GN=dxs PE=3 SV=1)

HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0
Identity = 303/639 (47.42%), Postives = 414/639 (64.79%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARG-MIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGD-GIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREA 1908
            +  P  L+ L + +++Q+A E+R +    +S T     A + VVELT AIHYVF+ P D+++WDVG Q Y HKILTGRR  + T++   GLSGFT R ES+YD FGA H   SISAGLGMAVARD+ G    V+AVI + +  AG AYEAM+NAG ++S ++VILND+  S+ P         V A+S+ LS+L S K++R  REA K + K +   + + AA+ +EY+RG M+G  G TLFEELG YY+GP+DGHN++ L+ +LQ V   ++ GP L+HV+T + +G      ++    K    + FD              +Y + F ++LV EA KD  IV + A M   + +++F++ FP R FDVG+AEQHAVTFA+GLA  G KPFC I S+FLQRAYDQV+HDV  Q +PVRF I  AGLVG+DG    G+FD  ++ CLPNM++MA SDE EL+HMVAT   IND+P+  RYPRG   G+G    D G+P++IG+GR++ +G  VA L +G+ +  C KA   LA LG+  TVADARF KPLD+ L+ +L   H  LIT+EEGSIGGFG+HV + +A +G LDG +K R +VLPD +++H +P      AGL    I       LG+  +A
Sbjct:   10 IRTPEDLRKLRVDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLAGGNNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP--------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMG--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRDAET-GPFLIHVVTQKGKG---YAPAEAASDKYHAVVKFDIATGTQAKAKSNAPSYQNVFGQSLVKEAAKDDKIVGITAAMPSGTGIDIFEKAFPARTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQVVHDVALQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRPSALRYPRGE--GRGVEMPDVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELAALGLSTTVADARFMKPLDVDLVLKLANEHEILITIEEGSIGGFGTHVMQTLAEHGKLDGEVKMRAMVLPDVFLDHDTPTAMYANAGLDAKAIVKKVFEALGKEHKA 632          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS_BRADU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=dxs PE=3 SV=1)

HSP 1 Score: 569.311 bits (1466), Expect = 0.000e+0
Identity = 300/635 (47.24%), Postives = 416/635 (65.51%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGD-GIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLD-GRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGR 1896
            +  P  L+ L I++++Q+A E+R +    +S T     A + VVELT AIHYVF+ P D+++WDVG Q Y HKILTGRR  + T++   GLSGFT R ES+YD FGA H   SISAGLGMAVARD+ G +  V+AVI +    AG AYEAM+NAG ++S ++VILND+  S+ P         V A+S+ LS+L S K++R  REAAK + KR+   +   A +V+EY+RG +   G TLFEELG YY+GP+DGHN++ L+ VL+ V  ++  GP+LVHV+T + +G      ++ +  K    + FD               Y + F ++LV EA+KD+ IV + A M   + +++F + FPDR FDVG+AEQHAVTFA+GLA  G KPFC I S+FLQR YDQ++HDV  Q +PVRF I  AGLVG+DG    G+FD  ++ CLPNM++MA +DE EL+HMVAT   I+D+P+  RYPRG   G+G    + GIP++IG+GR++ +G  +A L +G+ +  C KA   LA  G+  T+ADARF KPLD +L+ +L + H  LIT+EEGS+GGFGSHVA+F+   G LD G +K+R +VLPD + +H +P     +AGL    I A     LG+
Sbjct:   32 IRTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP--------PVGAMSAYLSRLYSGKTYRTLREAAKQINKRLPKIIANRANRVEEYSRGFM-MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEE-GPILVHVVTQKGKG---YGPAEASADKYHAVVKFDVATGTQAKAKPNAPAYQNVFGQSLVKEAQKDEKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSSLRYPRGE--GRGIEMPEVGIPLEIGKGRMIRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQFLTDQGALDSGMVKFRTMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGK 651          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS_RHOP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=dxs PE=3 SV=1)

HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0
Identity = 301/639 (47.10%), Postives = 412/639 (64.48%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARG-MIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGD-GIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREA 1908
            +  P  L+ L I +++Q+A E+R +    +S T     A + VVELT AIHYVF+ P D+++WDVG Q Y HKILTGRR  + T++   GLSGFT R ES+YD FGA H   SISAGLGMAVARD+ G    V+AVI + +  AG AYEAM+NAG ++S ++VILND+  S+ P         V A+S+ LS+L S K++R  REA K + K +   + + AA+ +EY+RG M+G  G TLFEELG YY+GP+DGHN++ L+ +LQ V   ++ GP L+HV+T + +G      ++    K    + FD              +Y + F ++LV EA KD  +V + A M   + +++F++ FPDR FDVG+AEQHAVTFA+GLA  G KPFC I S+FLQR YDQ++HDV  Q +PVRF I  AGLVG+DG    G+FD  ++ CLPN ++MA SDE EL+HMVAT   IND+P+  RYPRG   G+G    D G+P++IG+GR++ +G  VA L +G+ +  C KA   LA LG+  TVADARF KPLD+ L+ +L   H  LIT+EEGSIGGFGSHV + ++ +G LDG +K R +VLPD +++H +P      AGL    I       LG+   A
Sbjct:   10 IRTPDDLRKLRIDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLAGGTNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP--------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMG--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRDAET-GPFLIHVVTQKGKG---YAPAEAASDKYHAVVKFDIATGTQAKAKSNAPSYQNVFGQSLVKEAAKDDKVVGITAAMPSGTGIDIFEKAFPDRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGE--GRGVEMPDVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELATLGLSTTVADARFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDGEVKMRAMVLPDVFLDHDTPAAMYAAAGLDAKAIVKKVFEALGKEHAA 632          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS_RHOP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=dxs PE=3 SV=1)

HSP 1 Score: 568.155 bits (1463), Expect = 0.000e+0
Identity = 300/637 (47.10%), Postives = 415/637 (65.15%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARG-MIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGD-GIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTR 1902
            +  P  L+ L I +++Q+A E+R +    +S T     A + VVELT AIHYVF+ P D+++WDVG Q Y HKILTGRR  + T++   GLSGFT R ES++D FGAGH   SISAGLGMAVA D+ G +  V+AVI + +  AG AYEAM+NAG ++S ++VILND+  S+ P         V A+S+ LS+L S K++R  REA K + K +   + + AA+ +EY+RG M+G  G TLFEELG YY+GP+DGHN++ L+ +LQ V   D+ GP L+HV+T + +G      ++    K    + FD              +Y + F  +LV EA+KD  IV + A M   + +++F++ FP R FDVG+AEQHAVTFA+GLA  G KPFC I S+FLQR YDQ++HDV  Q +PVRF I  AGLVG+DG    G+FD  ++ CLPN ++MA SDE EL+HMVAT   IND P+  RYPRG   G+G    + GIP++IG+GR++ +G  +A L +G+ +  C KA   LA LG+  TVADARF KPLD++L+ +L + H  LITVEEGSIGGFGSHV + +A +G+LDG ++ R +VLPD +++H +P     +AGL    I       LG+ +
Sbjct:   13 IRTPDDLRKLRIDQVQQVADELRLETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGLGMAVASDLAGTKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP--------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMG--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRDADA-GPFLIHVVTQKGKG---YAPAEAAADKYHAVVKFDIATGTQAKTKSNAPSYQNVFGASLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDAPSAVRYPRGE--GRGVEMPEVGIPLEIGKGRVVRQGNKIALLSFGTRLAECEKAADELATLGLSTTVADARFMKPLDVELVLKLAREHEVLITVEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPAVMYARAGLDAKGIVKKVFEALGKDK 633          
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Match: DXS_RHOPT (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960 GN=dxs PE=3 SV=1)

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 298/635 (46.93%), Postives = 420/635 (66.14%), Query Frame = 1
Query:    4 VENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVAIHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEESPKTSVNAXXXXXXXXXXXXXFRRFREAAKGVTKRIG--MHELAAKVDEYARG-MIGPQGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQDGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAMESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQRAYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGD-GIPIKIGRGRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGR 1896
            +  P  L+ L I +++Q+A E+R +    +S T     A + VVELT A+HYVF+ P D+++WDVG Q Y HKILTGRR  + T++   GLSGFT R ES++D FGAGH   SISAGLGMAVA ++ G++  V+AVI + +  AG AYEAM+NAG ++S ++VILND+  S+ P         V A+S+ LS+L S K++R  REA K + K +   + + AA+ +EY+RG M+G  G TLFEELG YY+GPVDGHN++ L+ +LQ V   D+ GP L+HV+T + +G      ++    K    + FD              +Y + F ++LV EA+KD  IV + A M   + +++F++ FP R FDVG+AEQHAVTFA+GLA  G KPFC I S+FLQRAYDQ++HDV  Q++PVRF I  AGLVG+DG    G+FD  ++ CLPNM++MA +DE EL+HMVAT   I+D+P+  RYPRG   G+G    + GIP++IG+GR++ +G  VA L +G+ +    KA   LA LG+  TVADARF KPLD++L+ +L + H  L+T+EEGSIGGFGSHV + +A +G+LDG +K R +VLPD +++H +P     +AGL    I      +LG+
Sbjct:   13 IRTPEDLRKLRIDQVRQVADELRLETIDAVSVTGGHFGAGLGVVELTTALHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP--------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMG--GGTLFEELGFYYVGPVDGHNLDHLLPILQNVRDADT-GPFLIHVVTQKGKG---YGPAEAAADKYHAVVKFDIATGAQAKAKSNAPSYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGE--GRGVEMPEVGIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan04g215300 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
DXS_ARATH0.000e+061.411-deoxy-D-xylulose-5-phosphate synthase, chloropla... [more]
DXS_CAPAN0.000e+062.05Probable 1-deoxy-D-xylulose-5-phosphate synthase, ... [more]
DXS1_ORYSJ0.000e+060.501-deoxy-D-xylulose-5-phosphate synthase 1, chlorop... [more]
DXS2_ORYSJ0.000e+057.01Probable 1-deoxy-D-xylulose-5-phosphate synthase 2... [more]
DXS_RHOPB0.000e+047.721-deoxy-D-xylulose-5-phosphate synthase OS=Rhodops... [more]
DXS_RHOPS0.000e+047.421-deoxy-D-xylulose-5-phosphate synthase OS=Rhodops... [more]
DXS_BRADU0.000e+047.241-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrh... [more]
DXS_RHOP20.000e+047.101-deoxy-D-xylulose-5-phosphate synthase OS=Rhodops... [more]
DXS_RHOP50.000e+047.101-deoxy-D-xylulose-5-phosphate synthase OS=Rhodops... [more]
DXS_RHOPT0.000e+046.931-deoxy-D-xylulose-5-phosphate synthase OS=Rhodops... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 321..486
e-value: 2.3E-48
score: 176.7
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 322..483
e-value: 7.2E-31
score: 107.1
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIGENE3D3.40.50.920coord: 499..631
e-value: 8.5E-35
score: 121.2
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IISUPERFAMILY52922TK C-terminal domain-likecoord: 494..630
IPR033248Transketolase, C-terminal domainPFAMPF02780Transketolase_Ccoord: 499..622
e-value: 2.3E-31
score: 108.1
NoneNo IPR availableGENE3D3.40.50.970coord: 320..487
e-value: 2.9E-56
score: 191.1
NoneNo IPR availableCDDcd07033TPP_PYR_DXS_TK_likecoord: 327..480
e-value: 2.31529E-60
score: 196.509
IPR005477Deoxyxylulose-5-phosphate synthaseTIGRFAMTIGR00204TIGR00204coord: 2..628
e-value: 0.0
score: 591.6
IPR005477Deoxyxylulose-5-phosphate synthasePFAMPF13292DXP_synthase_Ncoord: 2..281
e-value: 5.0E-85
score: 284.9
IPR005477Deoxyxylulose-5-phosphate synthaseHAMAPMF_00315DXP_synthcoord: 1..631
score: 34.569
IPR005477Deoxyxylulose-5-phosphate synthaseCDDcd02007TPP_DXScoord: 40..286
e-value: 7.99064E-94
score: 285.595
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 4..383
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 320..509

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g215300; organism=Vigna angularis; type=mRNA; length=4712bp
ATGGTTGAAAACCCTCTTTGCTTGAAGAACTTATCTATTAAGGTTAACTG
TAAGCtcattatcattttcattttgcttttaCATTATTTCTTCTCACAAT
CTTGAAGTATCTCATTACCTAAATATTTGTCTTTGCAGGAACTGAAACAA
CTAGCTGTTGAAATTCGTTCAGATTTGTCTTCTATTATGTCACGTACACA
AATATCAGCGAAAGCAAGTATGGCAGTGGTAGAACTGACAGTTGCAATAC
ATTATGTTTTCAATGCTCCAGTGGACAAAATATTGTGGGATGTTGGGGAT
CAAGTAAGTGTTCTAAATTACATGCAAAAGGACAGTGTCCCTCTCGTTTA
AATTTTCTTCGCTCATTTTGGGCATGAAAATTGAATGCCAATTGCAAATT
GTTAATCATTGTTTCCAAGGAACTCATTTTGACACAGAACAATGAATATT
CCAATTTATAAGAATTCAATGAATGACCTGGTTTGGATAATGTAACCATT
TCATTATTTGTGTGCAGACATATGCACATAAGATTCTTACAGGAAGGCGA
TCTCTCATGACAACAGTGAAAAGAAAGAACGGTCTTTCTGGTTTTACTTC
CCGATTTGAGAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACA
GTATTTCTGCTGGACTTGGTAGTTTGTAAAGACCTTTccctttttaataa
tatttgtttcttCAAACACTATTCAAACTGTGTTTATATGCTTTTATTGT
CATTGACTGGTCTGAGTAAATTTGTTGGGTTGCTAAATTgtactttttct
gcattttccattttaaatgaataaataaaatttcgaAATGTGAAATTTAA
TTGACCTCAAAGTCATATGTGTATTATTTTATCAGGTATGGCAGTTGCCC
GGGATATTAAGGGCAGGCAAGAACGAGTAGTTGCAGTTATCAGCAATTGG
ACAACTATGGCTGGTCAGGCATATGAGGCAATGAGCAATGCAGGATACTT
AGACTCAAATATGGTTGTGATTTTGAATGATAGTCGTCACTCTTTACTTC
CAAAAATCGAGGAGAGTCCAAAGACATCTGTCAATGCCCTATCTAGTACC
CTGAGCAAGCTCCAGTCCAGTAAATCTTTCCGAAGATTTAGAGAAGCTGC
CAAGGTATGCCTCTTTTCTTCATCCTCTGCAAGAAAAGAATACTAGATAG
CTTCAAATCAGTAGTCTTCAGTATATGCTGTTGGCATGCAATGTTCATGT
GATAGTGCCATGTCATTCAACTTGAAACGAGCCTACTAAAGGAAGCATGT
TTCAACGGTAAATAACTCATAACTTTAGTATAAAATGGATTGAGTTTGTA
CATTAAGAGCAATGCTATTATGTACAATATGGGGCCTGTGGAAAATAGTG
TAACAACTAAGATTTTCCACCATGTGCATtaagaaagataaatatatgTA
CAAATATGCTTTCCACTCCCCCAAATCTGTGGTTTGATGTgcatttttat
ctatatatatatttttttgtatgtaGAATAACAAATGATATACCTAATAG
GGTTTAATGATGATCCTTCATTTAGATCTCATTTTCACATCTCAATGCTT
TGTGCTCcaatttcaaatcatgttcaagcgAGTGAAAACTTGTCTGCTTT
ATAACAGGGTGTTACTAAACGAATTGGTATGCATGAGTTGGCAGCTAAAG
TTGATGAATATGCCCGTGGTATGATAGGTCCCCAAGGTTCTACTCTTTTT
GAGGAGCTTGGGTTGTACTACATAGGCCCAGTGGATGGACACAATGTTGA
GGATCTAATATGCGTTCTCCAAGAAGTTGCTTCCCTGGATTCAATGGGAC
CCGTCTTGGTACATGTGATAACTGATGAAAGTCAGGGAGATGAAAACAAT
CAGAAAAGTGATATAACAGATATGAAACAAGATGGTGGCATTTCTTTTGG
TAACCTAtgataattatattgttttaattgttcCATTGCATGTTATTTCT
AGCAAAATAGCTTATCTAGCCATTATGTGATTACACTATAGttctttctt
tttgtacttTTGTCCCCGTGGTTGTGTTCTTATTTCAAATGCTCTAgctt
ttcaagaaaataaaatgaatatcttTGTATACTGATTAGTTTATAGATAG
ATTCAACGCAGTAGCTGGAAGATAACTTGCTTATGAAGTATATGATACTA
CGtaaacaaaacataacaaactaaTGAACCTCATATCAGTTACTGGAGTC
TGATATATGGATTAATAGACACCATTGAGCTCTACCAAAACTAAAATCTC
AGTATATTTTTTCAGATGTTTTCACTGAGTGTTTTCATGTTTTCCTTTTT
CCCTTTCAATAGTATTCCCAAGCATTTTGACCttattttgataaaagttg
aagCCAGCAGTGGCTTCTTATGGCTTCTACTACATATTTATTGTTTAGAT
GCAAAGTCATGTCTTCTGAATGCCAGGGGATTATAGTTTAGGCTCTTTAT
GGGATTGACCTTCTcgtcattttgaaaatttgattgatgtgatttGGCCA
CATAATTATTATTGAGTAACTATGTTTACTTTTCAGATCCTTTTAAATAT
GATACGTTAGATAATGTTGTTCGGCCTCAAACATACGGTGATTGCTTTGT
GGAGACTTTGGTTGCAGAAGCAGAGAAAGACAAAGATATTGTGGTTGTTC
ATGCTGGAATGGCGATGGAGTCATCCCTTGAACTGTTTCAGGAGAAATTT
CCAGATAGGATTTTTGATGTGGGAATGGCTGAGCAACATGCAGTCACCTT
TGCTTCTGGTTTGGCATGTGGTGGATTGAAGCCATTTTGCCTTATACCTT
CTTCCTTTCTGCAAAGAGCCTATGATCAGGTTCAACTTTATATCAGCTTA
AAGCCGTAAACTACCACGATAACCCTGATTTATTGTTCATAGAACATTTG
GATTTCTTTCAGAATAGATTATTTGTGGTTGGTATAGATCATTAAGTTTA
ATGGAATTAGTAATATTGTCATCATTAATTTGCTGTTATTATGAAGTGAA
TGAAAGTGGTAACAGCACTACATATCTGGTTGTGCTTAGGGAGTCAAATT
ATCAGGACTTAACTGAAAGTGTTTGTACTGTAAAAAGTATGAACCTTCAG
GAATTCTGGTACACTGGAGGATCTCTCACcgtgttaacaaaaatatataa
caaagaaaagtAATTGTCTCGTCTCATTATACCACCATTGTGTAATTTTA
ATATGGCTCTATGCGAGTGGGTGGAAGTGTGCCTGCCTAGTGCCTACTTA
CTCTTGCACGAGAAAAGATATAGTTAGTTCTCATTGCATAATAATACGAT
TTAAGCAATTATGATTTTTAACATGTTACGTACCACATATAGGTGATACA
CGATGTTGATCAACAGAGAATTCCAGTGCGCTTTGTCATTACAAGTGCTG
GATTGGTAGGTTCTGATGGTCCCCTCCAATGTGGAGCATTTGATATAACC
TTTATGTCATGCTTACCAAACATGATTGTCATGGCACCATCTGATGAGGT
TGAACTCATGCACATGGTAGCTACTGCTACTCATATCAATGACCAACCAG
CCTGCTTTCGCTATCCAAGGGGTGCCCTGGTTGGGAAAGGCTACACTGGA
GGCGATGGAATCCCCATCAAGGTAATTAGGCGACACTCTATTTTCTCGAT
ACATTGAAAGTTAGACTGAAACTTCGAATAGGGTAAACTGATTAATAAAC
CTAAGGAAGCGTCATTCGTTCTTAACTTCCCCAAATATttgtcataatat
tttttttatatatctgcCATCTCTAAATTTGGGGTGGTTGTAATCTATTC
ATTCAcagattggaagaggaagaattCTTGTTGAGGGTAAAGATGTTGCT
TTCCTGGGATACGGATCGATGGTTCAGAACTGCCTAAAGGCTCATTCACT
CCTTGCCAAACTTGGCATTGAGGTGACTGTTGCTGATGCAAGGTTCTGCA
AGCCCCTTGACATCAAACTTCTGAGGCAGCTCTGTAAACATCACTCTTTT
CTAATCACTGTCGAGGAAGGATCTATTGGAGGATTTGGTTCCCATGTTGC
CGAGTTTATTGCAGTTAATGGACTACTCGATGGAAGAATTAAGGTAATTG
GGTCAAGCTGTGTATGTGGGAAGGCTATACTGCTAGGTTCTAAGAATATT
TTGGATTATGAATGTGCTATTCACCTTCTATTTATAACTGGCGTAAAGat
acaaaattaacaaatttctCTACCTGTTTGAATTTCTTGGTGGGAAGTTG
TAAGTTTATCTTTTCAGCACTAAGATATCTCTACTGTGTTGTACATGTAA
TTGGAGATTGCTTGGGGTCCCTTTCATGCAgcaaattgtttattttagtt
ttatattgttttaaagatGATCCACtgattttatattatgtttatgcATT
TCTAATCACACACAGCTTTGACATAGCAAGTCTGCATGGCAtgagtaaat
ttttattttttgtgatcACAAGTGTGTGATATGTTTTTTGTGGATGAACT
TTCCAGTGGCGACCAATTGTCTTACCTGACAGATATATTGAACATGCATC
ACCAAATGAACAGCTTGACCAAGCGGGGTTGAGTGGACACCACATTGCTG
CCACGGCACTGAGTTTGCTAGGCCGTACACGGGAAGCTCTGCAGTTTATG
TGTTCCTCCTGA
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protein sequence of LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1

>LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=643bp
MVENPLCLKNLSIKELKQLAVEIRSDLSSIMSRTQISAKASMAVVELTVA
IHYVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTVKRKNGLSGFTSRFE
SEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYE
AMSNAGYLDSNMVVILNDSRHSLLPKIEESPKTSVNALSSTLSKLQSSKS
FRRFREAAKGVTKRIGMHELAAKVDEYARGMIGPQGSTLFEELGLYYIGP
VDGHNVEDLICVLQEVASLDSMGPVLVHVITDESQGDENNQKSDITDMKQ
DGGISFDPFKYDTLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGMAM
ESSLELFQEKFPDRIFDVGMAEQHAVTFASGLACGGLKPFCLIPSSFLQR
AYDQVIHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIV
MAPSDEVELMHMVATATHINDQPACFRYPRGALVGKGYTGGDGIPIKIGR
GRILVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIK
LLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPD
RYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALQFMCSS
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mRNA from alignment at Chr_4-CM003374.1:30763801..30768512+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g215300; organism=Vigna angularis; type=mRNA; length=4712bp; location=Sequence derived from: Chr_4-CM003374.1:30763801..30768512+ (Vigna angularis
ATGGTTGAAAACCCTCTTTGCTTGAAGAACTTATCTATTAAGGTTAACTG TAAGCtcattatcattttcattttgcttttaCATTATTTCTTCTCACAAT CTTGAAGTATCTCATTACCTAAATATTTGTCTTTGCAGGAACTGAAACAA CTAGCTGTTGAAATTCGTTCAGATTTGTCTTCTATTATGTCACGTACACA AATATCAGCGAAAGCAAGTATGGCAGTGGTAGAACTGACAGTTGCAATAC ATTATGTTTTCAATGCTCCAGTGGACAAAATATTGTGGGATGTTGGGGAT CAAGTAAGTGTTCTAAATTACATGCAAAAGGACAGTGTCCCTCTCGTTTA AATTTTCTTCGCTCATTTTGGGCATGAAAATTGAATGCCAATTGCAAATT GTTAATCATTGTTTCCAAGGAACTCATTTTGACACAGAACAATGAATATT CCAATTTATAAGAATTCAATGAATGACCTGGTTTGGATAATGTAACCATT TCATTATTTGTGTGCAGACATATGCACATAAGATTCTTACAGGAAGGCGA TCTCTCATGACAACAGTGAAAAGAAAGAACGGTCTTTCTGGTTTTACTTC CCGATTTGAGAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACA GTATTTCTGCTGGACTTGGTAGTTTGTAAAGACCTTTccctttttaataa tatttgtttcttCAAACACTATTCAAACTGTGTTTATATGCTTTTATTGT CATTGACTGGTCTGAGTAAATTTGTTGGGTTGCTAAATTgtactttttct gcattttccattttaaatgaataaataaaatttcgaAATGTGAAATTTAA TTGACCTCAAAGTCATATGTGTATTATTTTATCAGGTATGGCAGTTGCCC GGGATATTAAGGGCAGGCAAGAACGAGTAGTTGCAGTTATCAGCAATTGG ACAACTATGGCTGGTCAGGCATATGAGGCAATGAGCAATGCAGGATACTT AGACTCAAATATGGTTGTGATTTTGAATGATAGTCGTCACTCTTTACTTC CAAAAATCGAGGAGAGTCCAAAGACATCTGTCAATGCCCTATCTAGTACC CTGAGCAAGCTCCAGTCCAGTAAATCTTTCCGAAGATTTAGAGAAGCTGC CAAGGTATGCCTCTTTTCTTCATCCTCTGCAAGAAAAGAATACTAGATAG CTTCAAATCAGTAGTCTTCAGTATATGCTGTTGGCATGCAATGTTCATGT GATAGTGCCATGTCATTCAACTTGAAACGAGCCTACTAAAGGAAGCATGT TTCAACGGTAAATAACTCATAACTTTAGTATAAAATGGATTGAGTTTGTA CATTAAGAGCAATGCTATTATGTACAATATGGGGCCTGTGGAAAATAGTG TAACAACTAAGATTTTCCACCATGTGCATtaagaaagataaatatatgTA CAAATATGCTTTCCACTCCCCCAAATCTGTGGTTTGATGTgcatttttat ctatatatatatttttttgtatgtaGAATAACAAATGATATACCTAATAG GGTTTAATGATGATCCTTCATTTAGATCTCATTTTCACATCTCAATGCTT TGTGCTCcaatttcaaatcatgttcaagcgAGTGAAAACTTGTCTGCTTT ATAACAGGGTGTTACTAAACGAATTGGTATGCATGAGTTGGCAGCTAAAG TTGATGAATATGCCCGTGGTATGATAGGTCCCCAAGGTTCTACTCTTTTT GAGGAGCTTGGGTTGTACTACATAGGCCCAGTGGATGGACACAATGTTGA GGATCTAATATGCGTTCTCCAAGAAGTTGCTTCCCTGGATTCAATGGGAC CCGTCTTGGTACATGTGATAACTGATGAAAGTCAGGGAGATGAAAACAAT CAGAAAAGTGATATAACAGATATGAAACAAGATGGTGGCATTTCTTTTGG TAACCTAtgataattatattgttttaattgttcCATTGCATGTTATTTCT AGCAAAATAGCTTATCTAGCCATTATGTGATTACACTATAGttctttctt tttgtacttTTGTCCCCGTGGTTGTGTTCTTATTTCAAATGCTCTAgctt ttcaagaaaataaaatgaatatcttTGTATACTGATTAGTTTATAGATAG ATTCAACGCAGTAGCTGGAAGATAACTTGCTTATGAAGTATATGATACTA CGtaaacaaaacataacaaactaaTGAACCTCATATCAGTTACTGGAGTC TGATATATGGATTAATAGACACCATTGAGCTCTACCAAAACTAAAATCTC AGTATATTTTTTCAGATGTTTTCACTGAGTGTTTTCATGTTTTCCTTTTT CCCTTTCAATAGTATTCCCAAGCATTTTGACCttattttgataaaagttg aagCCAGCAGTGGCTTCTTATGGCTTCTACTACATATTTATTGTTTAGAT GCAAAGTCATGTCTTCTGAATGCCAGGGGATTATAGTTTAGGCTCTTTAT GGGATTGACCTTCTcgtcattttgaaaatttgattgatgtgatttGGCCA CATAATTATTATTGAGTAACTATGTTTACTTTTCAGATCCTTTTAAATAT GATACGTTAGATAATGTTGTTCGGCCTCAAACATACGGTGATTGCTTTGT GGAGACTTTGGTTGCAGAAGCAGAGAAAGACAAAGATATTGTGGTTGTTC ATGCTGGAATGGCGATGGAGTCATCCCTTGAACTGTTTCAGGAGAAATTT CCAGATAGGATTTTTGATGTGGGAATGGCTGAGCAACATGCAGTCACCTT TGCTTCTGGTTTGGCATGTGGTGGATTGAAGCCATTTTGCCTTATACCTT CTTCCTTTCTGCAAAGAGCCTATGATCAGGTTCAACTTTATATCAGCTTA AAGCCGTAAACTACCACGATAACCCTGATTTATTGTTCATAGAACATTTG GATTTCTTTCAGAATAGATTATTTGTGGTTGGTATAGATCATTAAGTTTA ATGGAATTAGTAATATTGTCATCATTAATTTGCTGTTATTATGAAGTGAA TGAAAGTGGTAACAGCACTACATATCTGGTTGTGCTTAGGGAGTCAAATT ATCAGGACTTAACTGAAAGTGTTTGTACTGTAAAAAGTATGAACCTTCAG GAATTCTGGTACACTGGAGGATCTCTCACcgtgttaacaaaaatatataa caaagaaaagtAATTGTCTCGTCTCATTATACCACCATTGTGTAATTTTA ATATGGCTCTATGCGAGTGGGTGGAAGTGTGCCTGCCTAGTGCCTACTTA CTCTTGCACGAGAAAAGATATAGTTAGTTCTCATTGCATAATAATACGAT TTAAGCAATTATGATTTTTAACATGTTACGTACCACATATAGGTGATACA CGATGTTGATCAACAGAGAATTCCAGTGCGCTTTGTCATTACAAGTGCTG GATTGGTAGGTTCTGATGGTCCCCTCCAATGTGGAGCATTTGATATAACC TTTATGTCATGCTTACCAAACATGATTGTCATGGCACCATCTGATGAGGT TGAACTCATGCACATGGTAGCTACTGCTACTCATATCAATGACCAACCAG CCTGCTTTCGCTATCCAAGGGGTGCCCTGGTTGGGAAAGGCTACACTGGA GGCGATGGAATCCCCATCAAGGTAATTAGGCGACACTCTATTTTCTCGAT ACATTGAAAGTTAGACTGAAACTTCGAATAGGGTAAACTGATTAATAAAC CTAAGGAAGCGTCATTCGTTCTTAACTTCCCCAAATATttgtcataatat tttttttatatatctgcCATCTCTAAATTTGGGGTGGTTGTAATCTATTC ATTCAcagattggaagaggaagaattCTTGTTGAGGGTAAAGATGTTGCT TTCCTGGGATACGGATCGATGGTTCAGAACTGCCTAAAGGCTCATTCACT CCTTGCCAAACTTGGCATTGAGGTGACTGTTGCTGATGCAAGGTTCTGCA AGCCCCTTGACATCAAACTTCTGAGGCAGCTCTGTAAACATCACTCTTTT CTAATCACTGTCGAGGAAGGATCTATTGGAGGATTTGGTTCCCATGTTGC CGAGTTTATTGCAGTTAATGGACTACTCGATGGAAGAATTAAGGTAATTG GGTCAAGCTGTGTATGTGGGAAGGCTATACTGCTAGGTTCTAAGAATATT TTGGATTATGAATGTGCTATTCACCTTCTATTTATAACTGGCGTAAAGat acaaaattaacaaatttctCTACCTGTTTGAATTTCTTGGTGGGAAGTTG TAAGTTTATCTTTTCAGCACTAAGATATCTCTACTGTGTTGTACATGTAA TTGGAGATTGCTTGGGGTCCCTTTCATGCAgcaaattgtttattttagtt ttatattgttttaaagatGATCCACtgattttatattatgtttatgcATT TCTAATCACACACAGCTTTGACATAGCAAGTCTGCATGGCAtgagtaaat ttttattttttgtgatcACAAGTGTGTGATATGTTTTTTGTGGATGAACT TTCCAGTGGCGACCAATTGTCTTACCTGACAGATATATTGAACATGCATC ACCAAATGAACAGCTTGACCAAGCGGGGTTGAGTGGACACCACATTGCTG CCACGGCACTGAGTTTGCTAGGCCGTACACGGGAAGCTCTGCAGTTTATG TGTTCCTCCTGA
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Coding sequence (CDS) from alignment at Chr_4-CM003374.1:30763801..30768512+

>LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g215300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g215300; organism=Vigna angularis; type=CDS; length=1932bp; location=Sequence derived from: Chr_4-CM003374.1:30763801..30768512+ (Vigna angularis
ATGGTTGAAAACCCTCTTTGCTTGAAGAACTTATCTATTAAGGAACTGAA
ACAACTAGCTGTTGAAATTCGTTCAGATTTGTCTTCTATTATGTCACGTA
CACAAATATCAGCGAAAGCAAGTATGGCAGTGGTAGAACTGACAGTTGCA
ATACATTATGTTTTCAATGCTCCAGTGGACAAAATATTGTGGGATGTTGG
GGATCAAACATATGCACATAAGATTCTTACAGGAAGGCGATCTCTCATGA
CAACAGTGAAAAGAAAGAACGGTCTTTCTGGTTTTACTTCCCGATTTGAG
AGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCTGC
TGGACTTGGTATGGCAGTTGCCCGGGATATTAAGGGCAGGCAAGAACGAG
TAGTTGCAGTTATCAGCAATTGGACAACTATGGCTGGTCAGGCATATGAG
GCAATGAGCAATGCAGGATACTTAGACTCAAATATGGTTGTGATTTTGAA
TGATAGTCGTCACTCTTTACTTCCAAAAATCGAGGAGAGTCCAAAGACAT
CTGTCAATGCCCTATCTAGTACCCTGAGCAAGCTCCAGTCCAGTAAATCT
TTCCGAAGATTTAGAGAAGCTGCCAAGGGTGTTACTAAACGAATTGGTAT
GCATGAGTTGGCAGCTAAAGTTGATGAATATGCCCGTGGTATGATAGGTC
CCCAAGGTTCTACTCTTTTTGAGGAGCTTGGGTTGTACTACATAGGCCCA
GTGGATGGACACAATGTTGAGGATCTAATATGCGTTCTCCAAGAAGTTGC
TTCCCTGGATTCAATGGGACCCGTCTTGGTACATGTGATAACTGATGAAA
GTCAGGGAGATGAAAACAATCAGAAAAGTGATATAACAGATATGAAACAA
GATGGTGGCATTTCTTTTGATCCTTTTAAATATGATACGTTAGATAATGT
TGTTCGGCCTCAAACATACGGTGATTGCTTTGTGGAGACTTTGGTTGCAG
AAGCAGAGAAAGACAAAGATATTGTGGTTGTTCATGCTGGAATGGCGATG
GAGTCATCCCTTGAACTGTTTCAGGAGAAATTTCCAGATAGGATTTTTGA
TGTGGGAATGGCTGAGCAACATGCAGTCACCTTTGCTTCTGGTTTGGCAT
GTGGTGGATTGAAGCCATTTTGCCTTATACCTTCTTCCTTTCTGCAAAGA
GCCTATGATCAGGTGATACACGATGTTGATCAACAGAGAATTCCAGTGCG
CTTTGTCATTACAAGTGCTGGATTGGTAGGTTCTGATGGTCCCCTCCAAT
GTGGAGCATTTGATATAACCTTTATGTCATGCTTACCAAACATGATTGTC
ATGGCACCATCTGATGAGGTTGAACTCATGCACATGGTAGCTACTGCTAC
TCATATCAATGACCAACCAGCCTGCTTTCGCTATCCAAGGGGTGCCCTGG
TTGGGAAAGGCTACACTGGAGGCGATGGAATCCCCATCAAGattggaaga
ggaagaattCTTGTTGAGGGTAAAGATGTTGCTTTCCTGGGATACGGATC
GATGGTTCAGAACTGCCTAAAGGCTCATTCACTCCTTGCCAAACTTGGCA
TTGAGGTGACTGTTGCTGATGCAAGGTTCTGCAAGCCCCTTGACATCAAA
CTTCTGAGGCAGCTCTGTAAACATCACTCTTTTCTAATCACTGTCGAGGA
AGGATCTATTGGAGGATTTGGTTCCCATGTTGCCGAGTTTATTGCAGTTA
ATGGACTACTCGATGGAAGAATTAAGTGGCGACCAATTGTCTTACCTGAC
AGATATATTGAACATGCATCACCAAATGAACAGCTTGACCAAGCGGGGTT
GAGTGGACACCACATTGCTGCCACGGCACTGAGTTTGCTAGGCCGTACAC
GGGAAGCTCTGCAGTTTATGTGTTCCTCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR009014Transketo_C/PFOR_II
IPR033248Transketolase_C
IPR005477Dxylulose-5-P_synthase
IPR029061THDP-binding
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00086611-deoxy-D-xylulose-5-phosphate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0016114terpenoid biosynthetic process