LR48_mrnaVigan04g220300

Transcript Overview
NameLR48_mrnaVigan04g220300
Unique NameLR48_mrnaVigan04g220300_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length576
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_4-CM003374.1supercontigChr_4-CM003374.1:31196008..31196583 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR536Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR547Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR553Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR597Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL046Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasL206Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR208Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR214Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0053Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0055Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0277Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0368Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0422Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0840Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0853Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1090Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1094Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR633Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR648Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR660Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0829Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0842Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0867Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR614Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR615Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR631Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR676Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR537Pisum sativum Cameor genome v1aPisum sativum
aspsR551Pisum sativum Cameor genome v1aPisum sativum
aspsR576Pisum sativum Cameor genome v1aPisum sativum
aspsR578Pisum sativum Cameor genome v1aPisum sativum
aspvR591Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR595Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR611Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR644Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR532Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR538Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR567Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR576Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR595Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR601Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR579Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR590Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR610Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR615Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR488Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR506Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR602Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR614Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR620Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR652Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR664Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR487Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR489Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR512Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR484Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR492Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR500Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR546Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Ca_14760.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-TanjilR_07869Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.3g204240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Hedin2.R1.2g183120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr09.1602Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014644246.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg35730.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.3g168760.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_009402Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr08.204Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014647078.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004501291.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Tiffany.R1.2g147680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat6g027680.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_004498694.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_01747Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_01256Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_26234Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cr_02978.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Phvul.009G092000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat6g028960.1Pisum sativum Cameor genome v1aPisum sativum
Psat5g029400.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.001G050300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun08g054400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun09g211100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan04g220300gene-LR48_Vigan04g220300_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220300LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31196581..31196583LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31196581..31196583Vigna angularisstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-CDS-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31196008..31196583LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-CDS-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31196008..31196583Vigna angularisCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31196008..31196583LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31196008..31196583Vigna angularisexon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31196008..31196010LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31196008..31196010Vigna angularisstop_codon


Homology
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BLAST of LR48_mrnaVigan04g220300 vs. DB:Swiss
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.257e-11
Identity = 38/65 (58.46%), Postives = 55/65 (84.62%), Query Frame = 1 
Query:  379 NIIVGNPPTSDCCALIKXXXXXXXXXXXXXXIKANVLGVNLNVPVTLSVILSACQKTVPPGFQCS 573
            N+++G+PPT  CC+L++ L +LEAA+CLCTAIKAN+LG NLN+P+ LS++L+ C K VP GF+C+
Sbjct:   73 NVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALSLVLNNCGKQVPNGFECT 137
[Close]
BLAST of LR48_mrnaVigan04g220300 vs. DB:Swiss
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.710e-11
Identity = 37/65 (56.92%), Postives = 54/65 (83.08%), Query Frame = 1 
Query:  379 NIIVGNPPTSDCCALIKXXXXXXXXXXXXXXIKANVLGVNLNVPVTLSVILSACQKTVPPGFQCS 573
            NI +G P +  CC+LI+ L D++AA+CLCTA++ANVLG+NLNVP++LSV+L+ C + +P GFQC+
Sbjct:   97 NIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQCA 161
[Close]
BLAST of LR48_mrnaVigan04g220300 vs. DB:Swiss
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.358e-11
Identity = 39/65 (60.00%), Postives = 53/65 (81.54%), Query Frame = 1 
Query:  379 NIIVGNPPTSDCCALIKXXXXXXXXXXXXXXIKANVLGVNLNVPVTLSVILSACQKTVPPGFQCS 573
            NI +G P    CC+LI+ L DL+AA+CLCTA++ANVLG+NLNVP++LSV+L+ C + VP GFQC+
Sbjct:  104 NIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQCA 168
[Close]
BLAST of LR48_mrnaVigan04g220300 vs. DB:Swiss
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.406e-9
Identity = 36/65 (55.38%), Postives = 52/65 (80.00%), Query Frame = 1 
Query:  379 NIIVGNPPTSDCCALIKXXXXXXXXXXXXXXIKANVLGVNLNVPVTLSVILSACQKTVPPGFQCS 573
            N+ +G P    CC+LI+ L DL+AA+CLCTA++ANVLG+NLNVP++LSV+L+ C + +P  FQC+
Sbjct:  113 NVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQCA 177
[Close]
BLAST of LR48_mrnaVigan04g220300 vs. DB:Swiss
Match: AIR1L_ARATH (Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana OX=3702 GN=AIR1B PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 3.100e-9
Identity = 38/66 (57.58%), Postives = 53/66 (80.30%), Query Frame = 1 
Query:  379 NIIVGNPPTSDCCALIKXXXXXXXXXXXXXXIKANVLG-VNLNVPVTLSVILSACQKTVPPGFQCS 573
            ++ +GNPP   CC+LI+ LADLEAA CLCTA+KA++LG VN+N+P+ LSV+L+ C +  P GFQC+
Sbjct:   43 DLTLGNPPVKPCCSLIQGLADLEAAACLCTALKASILGIVNINLPINLSVLLNVCSRNAPKGFQCA 108
[Close]
BLAST of LR48_mrnaVigan04g220300 vs. DB:Swiss
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.323e-8
Identity = 36/65 (55.38%), Postives = 52/65 (80.00%), Query Frame = 1 
Query:  379 NIIVGNPPTSDCCALIKXXXXXXXXXXXXXXIKANVLGVNLNVPVTLSVILSACQKTVPPGFQCS 573
            N+ +G P    CC+LI+ L DL+AA+CLCTA++ANVLG+NLNVP++LSV+L+ C + +P  FQC+
Sbjct:  118 NVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPSNFQCA 182
[Close]
BLAST of LR48_mrnaVigan04g220300 vs. DB:Swiss
Match: AIR1_ARATH (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 2.974e-8
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 1 
Query:  379 NIIVGNPPTSDCCALIKXXXXXXXXXXXXXXIKANVLG-VNLNVPVTLSVILSACQKTVPPGFQCS 573
            ++ +GNPP   CC+LI+ LADLEAA+CLCTA+KA++LG VN+N+P+ LSV+L+ C +  P  FQC+
Sbjct:   46 DLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKASILGIVNINLPINLSVLLNVCSRNAPKSFQCA 111
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan04g220300 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 7
Match NameE-valueIdentityDescription
14KD_DAUCA1.257e-1158.4614 kDa proline-rich protein DC2.15 OS=Daucus carot... [more]
ERLL1_ARATH1.710e-1156.92pEARLI1-like lipid transfer protein 1 OS=Arabidops... [more]
ERLI1_ARATH4.358e-1160.00Lipid transfer protein EARLI 1 OS=Arabidopsis thal... [more]
ERLL3_ARATH2.406e-955.38pEARLI1-like lipid transfer protein 3 OS=Arabidops... [more]
AIR1L_ARATH3.100e-957.58Putative lipid-binding protein AIR1B OS=Arabidopsi... [more]
ERLL2_ARATH1.323e-855.38pEARLI1-like lipid transfer protein 2 OS=Arabidops... [more]
AIR1_ARATH2.974e-856.06Putative lipid-binding protein AIR1 OS=Arabidopsis... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 29..50
score: 62.73
coord: 53..69
score: 62.35
coord: 70..87
score: 27.78
NoneNo IPR availableGENE3D1.10.110.10coord: 106..191
e-value: 3.7E-24
score: 86.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..109
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 109..190
e-value: 9.4E-6
score: 35.1
IPR027923Hydrophobic seed protein domainPFAMPF14547Hydrophob_seedcoord: 109..190
e-value: 7.8E-25
score: 86.8
IPR027923Hydrophobic seed protein domainCDDcd01958HPS_likecoord: 107..190
e-value: 4.92959E-28
score: 98.5548
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 112..190

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220300; organism=Vigna angularis; type=mRNA; length=576bp
ATGGCTTCCCACAAACTCCTCACCATTTTCCTGCTTTCTCTCATTTCTTT
CTCTTCATTCGCTCAGGACTGCGCACCTCCAAAGCCCGCACCCAAACCAC
CCACTCCAAAGCCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAAAG
GTAAGCCCACCACCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAAA
GGTAAGTCCACCACCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAA
AGGTAAGTCCACCACCCTCGCCCAACGCCTGTCCTCCTACTCCTCCCACT
CCTACTCCTCCTCCACCTGCTTCCTGCCCTAAAGACACCCTAAAGCTAGG
TGTTTGTGGTAAGGTCTTAGGACTTGTGAACATTATTGTTGGAAATCCTC
CTACGAGTGACTGTTGCGCTTTGATCAAAGACTTGGCGGATTTGGAAGCT
GCACTTTGCCTTTGCACTGCCATTAAGGCCAATGTGCTTGGAGTCAACTT
GAATGTTCCTGTCACGCTCAGCGTCATCCTCAGTGCGTGTCAGAAAACTG
TTCCTCCTGGCTTCCAATGTTCCTAG
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protein sequence of LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1

>LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=191bp
MASHKLLTIFLLSLISFSSFAQDCAPPKPAPKPPTPKPAPTPPTPKPSPK
VSPPPAPTPPTPKPSPKVSPPPAPTPPTPKPSPKVSPPPSPNACPPTPPT
PTPPPPASCPKDTLKLGVCGKVLGLVNIIVGNPPTSDCCALIKDLADLEA
ALCLCTAIKANVLGVNLNVPVTLSVILSACQKTVPPGFQCS
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mRNA from alignment at Chr_4-CM003374.1:31196008..31196583-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220300; organism=Vigna angularis; type=mRNA; length=576bp; location=Sequence derived from: Chr_4-CM003374.1:31196008..31196583- (Vigna angularis
ATGGCTTCCCACAAACTCCTCACCATTTTCCTGCTTTCTCTCATTTCTTT
CTCTTCATTCGCTCAGGACTGCGCACCTCCAAAGCCCGCACCCAAACCAC
CCACTCCAAAGCCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAAAG
GTAAGCCCACCACCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAAA
GGTAAGTCCACCACCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAA
AGGTAAGTCCACCACCCTCGCCCAACGCCTGTCCTCCTACTCCTCCCACT
CCTACTCCTCCTCCACCTGCTTCCTGCCCTAAAGACACCCTAAAGCTAGG
TGTTTGTGGTAAGGTCTTAGGACTTGTGAACATTATTGTTGGAAATCCTC
CTACGAGTGACTGTTGCGCTTTGATCAAAGACTTGGCGGATTTGGAAGCT
GCACTTTGCCTTTGCACTGCCATTAAGGCCAATGTGCTTGGAGTCAACTT
GAATGTTCCTGTCACGCTCAGCGTCATCCTCAGTGCGTGTCAGAAAACTG
TTCCTCCTGGCTTCCAATGTTCCTAG
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Coding sequence (CDS) from alignment at Chr_4-CM003374.1:31196008..31196583-

>LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220300; organism=Vigna angularis; type=CDS; length=576bp; location=Sequence derived from: Chr_4-CM003374.1:31196008..31196583- (Vigna angularis
ATGGCTTCCCACAAACTCCTCACCATTTTCCTGCTTTCTCTCATTTCTTT
CTCTTCATTCGCTCAGGACTGCGCACCTCCAAAGCCCGCACCCAAACCAC
CCACTCCAAAGCCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAAAG
GTAAGCCCACCACCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAAA
GGTAAGTCCACCACCCGCACCCACACCACCCACTCCAAAGCCCAGCCCAA
AGGTAAGTCCACCACCCTCGCCCAACGCCTGTCCTCCTACTCCTCCCACT
CCTACTCCTCCTCCACCTGCTTCCTGCCCTAAAGACACCCTAAAGCTAGG
TGTTTGTGGTAAGGTCTTAGGACTTGTGAACATTATTGTTGGAAATCCTC
CTACGAGTGACTGTTGCGCTTTGATCAAAGACTTGGCGGATTTGGAAGCT
GCACTTTGCCTTTGCACTGCCATTAAGGCCAATGTGCTTGGAGTCAACTT
GAATGTTCCTGTCACGCTCAGCGTCATCCTCAGTGCGTGTCAGAAAACTG
TTCCTCCTGGCTTCCAATGTTCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
IPR027923Hydrophob_seed_dom
IPR036312Bifun_inhib/LTP/seed_sf