LR48_mrnaVigan04g220400

Transcript Overview


Name	LR48_mrnaVigan04g220400
Unique Name	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	8969
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_4-CM003374.1	supercontig	Chr_4-CM003374.1:31231601..31240569 +	Vigna angularis Jingnong 6 genome v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis Jingnong 6 genome v1.1	2020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.1	2020-05-21
BLAST: V. angularis Jingnong 6 genome v1.1	2020-05-21

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ascaR536	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ascaR547	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ascaR553	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ascaR597	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
asasL046	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asasL206	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asasR208	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asasR214	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasL0053	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0055	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0277	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0368	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0422	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0840	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0853	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL1090	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL1094	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ascaiR633	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ascaiR648	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ascaiR660	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
asccR0829	Cajanus cajan Asha genome v1.0	Cajanus cajan
asccR0842	Cajanus cajan Asha genome v1.0	Cajanus cajan
asccR0867	Cajanus cajan Asha genome v1.0	Cajanus cajan
ascrR614	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ascrR615	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ascrR631	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ascrR676	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
aspsR537	Pisum sativum Cameor genome v1a	Pisum sativum
aspsR551	Pisum sativum Cameor genome v1a	Pisum sativum
aspsR576	Pisum sativum Cameor genome v1a	Pisum sativum
aspvR591	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
aspvR595	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
aspvR611	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
aspvR644	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
asvuR532	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
asvuR538	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
astifR567	Vicia faba cv. Tiffany genome v1.0	Vicia faba
astifR576	Vicia faba cv. Tiffany genome v1.0	Vicia faba
astifR595	Vicia faba cv. Tiffany genome v1.0	Vicia faba
astifR601	Vicia faba cv. Tiffany genome v1.0	Vicia faba
asvfhR579	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvfhR590	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvfhR610	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvfhR615	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvrvR488	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
asvrvR506	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
asvssR602	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR614	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR620	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR652	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR664	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvuaR487	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
asvuaR489	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
asvuaR512	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ascanR484	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ascanR492	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ascanR500	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ascanR546	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
jg55354.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Phvul.009G091900.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Cr_02976.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Ca_01745	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
rna-TanjilR_12489	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_07868	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vigun09g211200.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Ca_14762.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
rna-XM_014645558.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
rna-XM_012716172.2	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
rna-KK1_009404	Cajanus cajan Asha genome v1.0	Cajanus cajan
rna-TanjilR_30715	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vfaba.Hedin2.R1.2g183000.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Psat5g029560.1	Pisum sativum Cameor genome v1a	Pisum sativum
evm.model.Chr09.1601.1.62113178	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.2g147600.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LR48_Vigan04g220400	gene-LR48_Vigan04g220400_Va_Jingnong6_v1.1	Vigna angularis	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan04g220400	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-protein	Vigna angularis	polypeptide
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1	Vigna angularis	polypeptide

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31231601..31231603	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31231601..31231603	Vigna angularis	start_codon

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31231601..31232930	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31231601..31232930	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31233330..31233803	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31233330..31233803	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31233914..31234215	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31233914..31234215	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31234857..31235579	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31234857..31235579	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31235662..31235940	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31235662..31235940	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31236119..31236280	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31236119..31236280	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31236550..31237488	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31236550..31237488	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31237581..31237796	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31237581..31237796	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31239316..31239576	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31239316..31239576	Vigna angularis	exon
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31240225..31240569	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31240225..31240569	Vigna angularis	exon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31232931..31233329	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31232931..31233329	Vigna angularis	intron
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31233804..31233913	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31233804..31233913	Vigna angularis	intron
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31234216..31234856	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31234216..31234856	Vigna angularis	intron
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31235580..31235661	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31235580..31235661	Vigna angularis	intron
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31235941..31236118	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31235941..31236118	Vigna angularis	intron
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31236281..31236549	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31236281..31236549	Vigna angularis	intron
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31237489..31237580	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31237489..31237580	Vigna angularis	intron
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31237797..31239315	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31237797..31239315	Vigna angularis	intron
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31239577..31240224	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31239577..31240224	Vigna angularis	intron

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS2176	CDS2176_Va_Jingnong6_v1.1	Vigna angularis	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31240567..31240569	LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31240567..31240569	Vigna angularis	stop_codon

Homology

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.247e-17
Identity = 57/165 (34.55%), Postives = 89/165 (53.94%), Query Frame = 1

Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDSELSSSGSPLDNSG 1689
            KFTW I  FTRL      RK       S  F +G    R++++P+G +    HLS++L+V D+ N    WS +    L+VVNQ     S+ KE+Q++++    DWG+  F+ L+ L++   G+LV DTV+  AEV + K    + D+  +DS+  +    L N G
Sbjct:   55 KFTWTIPMFTRLN----TRKHY-----SDVFVVGGYKWRILIFPKGNNV--DHLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK----VLDYWSYDSKKETGFVGLKNQG 204

HSP 2 Score: 87.4261 bits (215), Expect = 8.186e-16
Identity = 43/128 (33.59%), Postives = 77/128 (60.16%), Query Frame = 1

Query:  190 WTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILI 573
            WT+  F R+  R  +S  F VGGY  R+LI+PKG++     ++S+YL + D        W  ++ + LA+VN  ++  +I +++ H+F++++   G+  F P S +++P  GYL N D+VLI A++ +
Sbjct:   58 WTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVADAANLPYG-WSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVN-DTVLIEAEVAV 180

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.611e-16
Identity = 56/165 (33.94%), Postives = 90/165 (54.55%), Query Frame = 1

Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDSELSSSGSPLDNSG 1689
            KFTW I NF+R       RK       S  F +G    R++++P+G +    HLS++L+V+D+ +    WS +    L+VVNQ     +V KE+Q++++    DWG+  F+ L+ L+D   G+LV DTV+  AEV + K    + D+  +DS+  +    L N G
Sbjct:   56 KFTWTIPNFSRQN----TRKHY-----SDVFVVGGYKWRILIFPKGNNV--DHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK----VLDYWSYDSKKETGFVGLKNQG 205

HSP 2 Score: 89.7373 bits (221), Expect = 1.892e-16
Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 1

Query:  190 WTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILI 573
            WT+ NF R   R  +S  F VGGY  R+LI+PKG++     ++S+YL + D   +    W  +A + LA+VN      T+ +++ H+F++++   G+  F P S ++DP  GYL N D+VL+ A++ +
Sbjct:   59 WTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSD-AASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVN-DTVLVEAEVAV 181

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: MCC16_ARATH (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.182e-16
Identity = 53/162 (32.72%), Postives = 79/162 (48.77%), Query Frame = 1

Query: 1192 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDSELSSSGSPL 1677
             KFTW I+NF+  +            + S +F IG    RL+VYP G ++   HLS+FLEV D R+    WS    + L++VNQ  +  S   E+   +++    WG    + LT L  +D GFLV D +   AEV +L+    + D  E   E +    P+
Sbjct:    7 NKFTWVIQNFSSSQ---------SRVVPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLEVADPRSLPPGWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVNDELKIVAEVNVLEVIGKL-DVPEESEEETQVTQPM 158

HSP 2 Score: 62.3882 bits (150), Expect = 1.378e-8
Identity = 38/129 (29.46%), Postives = 65/129 (50.39%), Query Frame = 1

Query:  190 WTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILIL 576
            W + NF   ++R + S  F +GG   RLL+YP+G +++   ++S++L++ DPR      W   A Y L IVN   D  +   ++   F+ K    G     P + +     G+L N D + I A++ +L
Sbjct:   11 WVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNKS-GDHLSLFLEVADPRSLPPG-WSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVN-DELKIVAEVNVL 136

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: MCC23_ARATH (MATH domain and coiled-coil domain-containing protein At3g58340 OS=Arabidopsis thaliana OX=3702 GN=At3g58340 PE=4 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 4.841e-13
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 1

Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 1611
            KF W I+NF+ L         +  C  S    IG+   RL+ +P+G      +LS++LEV D ++  S W  +V  R  +VNQ  ++ SV +E+Q  + + A  WG+   + LT L  +D GFLV   V+  AEV  L+
Sbjct:    8 KFCWEIKNFSSLN--------SERC-HSVPVVIGDCKWRLVAFPKGYKAD--YLSLYLEVADFKSLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVMIVAEVEFLE 135

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: MCC29_ARATH (MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN=At3g58410 PE=4 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 4.640e-11
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 1

Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIK--SRRFQIGNRDCRLIVYPRGQSQPPC-HLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEV 1599
            KF W I+NF+ L+           C K  S  FQIG+   RL +YP+G +   C +LS+FLEV D ++  S W  +V  RL +V Q     ++ +++   + +    WG+   + LT L D+  GFLV   ++  AEV
Sbjct:    8 KFAWVIKNFSSLQ-----------CKKFYSVPFQIGDCKWRLSIYPKGNN---CDYLSLFLEVADFKSLPSGWRRYVKLRLYIVKQL---STLIRKTHRWFDQEMWGWGFLYMLPLTKLHDEKEGFLVNGELMIVAEV 128

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: MCC19_ARATH (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 7.882e-11
Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 1

Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIM 1626
            KF+W I+NF+ L+            I S +F I     RL+ +P+G      HLS++L+V +S +    W        ++VN   E  S  KE+ + + +   DWG+   V L  L  +DSGFLV+  +    E+ +L+   ++
Sbjct:   10 KFSWVIKNFSSLQ---------SEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAESESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGFLVKGELKIVVEIEVLEVIGLL 144

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: MCC15_ARATH (MATH domain and coiled-coil domain-containing protein At3g58200 OS=Arabidopsis thaliana OX=3702 GN=At3g58200 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.353e-10
Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 1

Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFL 1566
            KF W I+NF+ L     +R  + +      F +G+   RL+ YP+G     C  S+FL VTD +    DW      RL+VVNQ  E+ S+ KE+Q  + +    WG+   + LT L  ++ GFL
Sbjct:    8 KFRWVIKNFSSLGS---ERVFSDI------FVVGSCKWRLMAYPKGVRDNRC-FSLFLVVTDFKTLPCDWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTELKAENGGFL 121

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: MCC20_ARATH (MATH domain and coiled-coil domain-containing protein At3g58260 OS=Arabidopsis thaliana OX=3702 GN=At3g58260 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.243e-10
Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 1

Query: 1198 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPR-GQSQPPCHLSVFLEVTDS-RNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 1611
            FTW I+N + L+         GL ++S+ F +G    RLI YP    +     LSV+L V D   +  S W       L++VNQ  E  S  +E+Q  + + A  WG+   + L  + D+  GFLV D V+ +  V +++
Sbjct:    9 FTWVIKNLSTLQ---------GLEVRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGVPDCCESLPSGWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDKYGGFLVNDEVMVAVAVDVIE 139

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: MCC25_ARATH (MATH domain and coiled-coil domain-containing protein At3g58360 OS=Arabidopsis thaliana OX=3702 GN=At3g58360 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.101e-10
Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 1

Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 1611
            K TW IENF+ L    KK       I S  F +G    R +VYP+G +    +L ++LEV D  + S +W     + L+VVNQ    +S   E Q  +   +  WG      L  +  +DSGFLV   +   AE+ +L+
Sbjct:    8 KITWAIENFSSLHS--KK-------IYSDPFIVGGCKWRFLVYPKGNNVD--YLFLYLEVADYESLSPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFLVNGELKIVAEIEVLE 135

[Close]

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Match: FNKC_DICDI (Probable inactive serine/threonine-protein kinase fnkC OS=Dictyostelium discoideum OX=44689 GN=fnkC PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.274e-9
Identity = 57/252 (22.62%), Postives = 117/252 (46.43%), Query Frame = 1

Query: 1354 LSVFLEVTDSRNTSSDWSCF----VSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDSELSSSGSPLDNSGKRSSFTWKVENFLSFKEIMETRK---IFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTV--WKESSICTKTWNNSVLQFMKVSDMLEVDAGFLVRDTVVFVCEILDCCP 2082
            LS+F+   D  N  + ++ F    +S++L+++NQK  ++S+ K S + +S    + G+  F+ L SL + ++GFLV +T+    +                    ++  SPL N+  +  +   +    S+   M ++K     S  F + G +  I +Y        Y+        + ++N  V + + +++Q  P +++  W +    +K+ +    +F+ VS +++ D GFLV DT++    IL   P
Sbjct: 1071 LSIFISNCDLLN--NPFTIFLEKSISYKLTLINQKNPNESIQKSSSHTFSIKEFNHGYGSFIGLFSLLNPNNGFLVNNTIKVRID--------------------AAPTSPLVNTYDK--YNIGLNQAFSYSVPMMSKKSEPFISPIFMSCGRKWIIKIYPMGQPSSNYMSVFLEYRDEGEEN--VHFSLELISQLYPEQSIKYWVQYRFNSKSNSFGYPKFIGVSTLMDPDMGFLVNDTIILNVSILQLKP 1296

The following BLAST results are available for this feature:

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss

BLAST of LR48_mrnaVigan04g220400 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
UBP13_ARATH	8.247e-17	34.55	Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabid...	[more]
UBP12_ARATH	1.611e-16	33.94	Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabid...	[more]
MCC16_ARATH	2.182e-16	32.72	MATH domain and coiled-coil domain-containing prot...	[more]
MCC23_ARATH	4.841e-13	34.53	MATH domain and coiled-coil domain-containing prot...	[more]
MCC29_ARATH	4.640e-11	34.06	MATH domain and coiled-coil domain-containing prot...	[more]
MCC19_ARATH	7.882e-11	29.17	MATH domain and coiled-coil domain-containing prot...	[more]
MCC15_ARATH	3.353e-10	34.68	MATH domain and coiled-coil domain-containing prot...	[more]
MCC20_ARATH	7.243e-10	31.43	MATH domain and coiled-coil domain-containing prot...	[more]
MCC25_ARATH	8.101e-10	33.09	MATH domain and coiled-coil domain-containing prot...	[more]
FNKC_DICDI	8.274e-9	22.62	Probable inactive serine/threonine-protein kinase ...	[more]

InterPro

Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1516..1543
None	No IPR available	COILS	Coil	Coil	coord: 1371..1508
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 930..944
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 859..945
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 894..913
IPR002083	MATH/TRAF domain	SMART	SM00061	math_3	coord: 570..670 e-value: 0.17 score: 12.2 coord: 61..169 e-value: 8.1E-8 score: 42.0 coord: 234..347 e-value: 0.13 score: 13.5 coord: 402..514 e-value: 0.019 score: 22.4
IPR002083	MATH/TRAF domain	PFAM	PF00917	MATH	coord: 68..191 e-value: 9.9E-9 score: 35.3 coord: 578..685 e-value: 0.0027 score: 17.8 coord: 429..535 e-value: 4.2E-11 score: 42.9
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 565..689 score: 13.615
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 397..533 score: 29.059
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 59..189 score: 25.454
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 229..366 score: 18.652
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 398..533 e-value: 7.69867E-29 score: 110.547
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 63..189 e-value: 4.51802E-21 score: 88.5902
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 567..689 e-value: 8.95573E-15 score: 70.4858
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 230..362 e-value: 4.03929E-17 score: 77.0342
IPR008974	TRAF-like	GENE3D	2.60.210.10		coord: 388..542 e-value: 4.2E-36 score: 126.1 coord: 554..691 e-value: 1.5E-17 score: 65.8
IPR008974	TRAF-like	GENE3D	2.60.210.10		coord: 57..209 e-value: 8.5E-31 score: 108.9
IPR008974	TRAF-like	GENE3D	2.60.210.10		coord: 228..373 e-value: 1.3E-23 score: 85.5
IPR008974	TRAF-like	SUPERFAMILY	49599	TRAF domain-like	coord: 227..372
IPR008974	TRAF-like	SUPERFAMILY	49599	TRAF domain-like	coord: 58..197
IPR008974	TRAF-like	SUPERFAMILY	49599	TRAF domain-like	coord: 566..690
IPR008974	TRAF-like	SUPERFAMILY	49599	TRAF domain-like	coord: 398..539

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_4-CM003374.1:31231601..31240569+
coding sequence from alignment at Chr_4-CM003374.1:31231601..31240569+

mRNA sequence

>LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220400; organism=Vigna angularis; type=mRNA; length=8969bp
ATGAAGCAAGCTTCGGCCGAGGCAGTTCCTTCCCTATCTTCTACGCCGTC
GTTCACGGAGGCGGCAACATCGTCGTCATCCTCCGCCGCTGCGGCGGAGG
ACCTGGCAGTGGGGTCGCGGGACGGTGGCGGCGGGGCTCAGGAGACGGTG
GCGGTGGATCGGCGAGGCGAGTACTCCGCCGTGTGTCGATGGACGGTGCA
CAATTTCCCGAGAATAAAGGCTAGGGCACTGTGGAGCAAATACTTCGAGG
TAGGCGGTTACGATTGTCGGTTGCTAATATATCCTAAGGGTGACTCACAG
GCGCTTCCTGGGTACATCTCCATCTACCTCCAAATCATGGACCCTCGCGG
TACCTCCTCTTCCAAATGGGACTGTTTCGCGAGTTATCGGTTGGCAATCG
TGAACGTAGCCGACGATTCCAAAACCATTCACCGAGATTCCTGGCACCGA
TTCTCCAGTAAGAAGAAATCACACGGTTGGTGTGATTTCACACCCTCTTC
CACCGTTTTCGACCCCAAATTGGGATACCTCTTCAATACGGATTCCGTTT
TGATCACTGCGGATATTCTCATTCTCAATGAGTCCGTTAATTTCACGCGG
GACAACAATGAGTTGCAGTCCTCATCTTCGTCCTCGTCTTCGACAAGTTC
CTCCGTTGTTGCAGGTCCCGTGTCTGATGTGTTGAGTGGTAAGTTCACTT
GGAAAGTGCATAATTTCAGTCTGTTTAAGGAGATGATCAAGACACAGAAA
ATAATGAGCCCGGTGTTTCCTGCGGGGGAATGTAATTTGAGAATAAGTGT
GTACCAGAGCTCTGTGAATGGGGTTGAGTATTTGTCTATGTGTCTGGAGA
GCAAGGACACGGATAAGACTGTGGTGTTATCTGATAGGAGTTGTTGGTGT
TTGTTTAGGATGTCTGTGTTGAACCAGAGGCCTGGTTCCAATCACATGCA
TAGGGATTCTTATGGCCGGTTTGCGGCTGATAATAAGAGCGGTGACAATA
CCAGCTTGGGATGGAATGATTACATGAAAATGTCGGATTTTATCGGTGTG
GATTCGGGGTTTTTGGTGGATGACACCGCTGTTTTTAGCACCTCATTTCA
TGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAATGGTTCTGTGATTGCCG
GGAGAAGTGGGAGTGGTGCTAGGAAGTCTGATGGGCATATTGGAAAGTTC
ACTTGGAGAATTGAGAATTTTACTAGATTGAAGGATTTGCTAAAGAAGAG
GAAAATCACGGGTCTGTGCATCAAGAGCCGGAGGTTTCAGATTGGTAATA
GGGATTGTCGACTTATTGTTTACCCTCGAGGTGTGCAATACTTTTGCTGT
GCAaatctattttcattttctgtgaACCACTTTCTTAGGCCTATTAAATA
TTTGCGGTATTGTTTGTGAGTCAAAACTCCATTAGATGTGATATTGTACG
CATTTTAGTGCAATTATTGCCTATATTGGTAGAATTGAAAGGGCATTCTT
GCTGCAGTTTTATCAGCTATTCTGTCTTTGAAATTTTCATTGTATCTGAT
ATTTCATGCTTGTAGTTGCATATCTACTGGTACCACCATTAGCTTAATTG
ATAATCCAGATATTGGGTTTTGATGTGTGAATATAATAGTCACTGAGTAT
ATTTAAATGTAGCGAATACTTTTAGATTTTGATAAAAGATGGAGTCTGAT
GAATTTTTATGTGATTTTGATGCTATCAGGGCAGTCTCAGCCACCATGTC
ACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGAT
TGGAGTTGTTTTGTTAGTCATCGTTTATCAGTTGTGAACCAGAAGATGGA
GGATAAATCTGTCACCAAGGAATCTCAGAACCGCTACTCAAAAGCTGCAA
AGGATTGGGGTTGGCGTGAATTTGTGACACTCACCAGTCTCTTTGATCAA
GATTCAGGTTTTCTTGTCCAGGACACTGTCATATTCTCTGCTGAGGTTCT
TATATTGAAGGAGACATCAATAATGCAGGATTTTACTGAGCATGATTCTG
AGTTGAGCAGCAGTGGCTCTCCTCTGGATAATTCTGGCAAAAGAAGTTCA
TTTACATGGAAAGTTGAGAATTTCTTGTCTTTCAAGGAAATAATGGAGAC
ACGAAAAATCTTCAGTAAATTCTTTCAAGCTGGTGGATGTGAACTTCGAA
TTGGTAGATGTTCTTGCATAAATTATCTTCTGCATTTTATTCACTGGTAG
TAGTAGCAGTAGtaaacttttatgtttttattctttgatTAAGCTTACTT
TTCCATGACCCAGGTGTATATGAGTCGTTTGACACgatatgtatttattt
agagAGCGATCAGGCTGTTGGTAGTGATCCCGATAAAAATTTCTGGGTGA
GATACAGGATGGCTGTTGTGAATCAAAAGAACCCAGCCAAGACAGTGTGG
AAAGAATCCTCTATCTGCACAAAGACGTGGAATAATTCTGTTTTACAATT
CATGAAGGTGTCTGATATGTTAGAAGTGGATGCAGGATTTCTTGTACGTG
ACACTGTTGTTTTTGTATGTGAAATATTGGATTGCTGTCCTTGGTTTGAG
TTTTCCGATTTAGAGGTAAGTCCTTATGGATTGCTTGTCTCCGTGTTACA
TTGTACTTACAAATATCATTTGATAGAGACCAAATATTCTTGCCCCATGT
TTTAAGACTTTCCTCCTACCATCATAGGATGACCTATTCTTGACTTTAGA
GATGAGACTACATGTAATCCTGTATTCATAGTTATTGATTTGAACTGGCT
CTTCTGCCTCTGACATGTCactaatttaacatataatatctttttttatg
aCTCATTTTTAATGTAAGATCGGAACAAGCCAGTTAGGAAATATGGCCTC
TTCCTTGGAACTTTTGCTTGTGATTAGCTGATAAGATGCATGGAACAAGC
TGATAAGTCACGAGTTACAGAAGTTGATTAATGCTTCAGTTCATAATTTT
GCATCCCTTGAACTTCTTATTGTACAATAAAAATTTGTAAGCAGATTTCT
ATCCCATACCTGAGCCATATGATATGTTATGATTATGTCTTatgtgaaag
ataaaaatgGTTATATGTATTACATCTCAGCTTCTCACATGTTGTAAAAT
CGGGATTTTGTTATGGATTCTATAATACCTACttgttgtattaaattttg
GTTGCTCTTATCATACGGTTGCAGACACATCATCTGATATTTTCTTCAAT
ATTCAGGTTTTAGCATCAGAGGATGATCAAGATGCATTGACAACTGACCC
TGATGAGCTCATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGATGAGG
AAGATATTTTCAGAAATCTTCTTTCTAGAGCTGGATTCCATTTAACATAT
GGAGATAATCCTTCTCAGCCACAAGTTACTTTAAGGGAGAAACTTCTAAT
GGATGCTGGTGCAATTGCAGGGTTTCTTACTGGTCTTCGAGTCTATCTTG
ATGATCCTGCAAAAGTGAAGCGCCTGCTTCTACCTACCAAGCTGTCTGGT
AGTTGTGATGGGAAGAAGGCCACCAAAGCTGATGAATCTTCCCCAAGTTT
GATGAATTTGCTGATGGGAGTTAAAGTCTTGCAGCAAGCTATCATAGATT
TACTATTAGATATAATGGTCGAGTGCTGTCAACCTTCTGAAGTAGGTCCT
GTTGCTGATTCTGTTGATGCATGTTCTAAACCTTCTTCAGATGGAAGTGG
AGCTGCTACTCCTCTTGAGTGTGAAAGAGAAAGTGGAACAATGGAGTCTG
CACGAGTTCCTGGTAATGAGAGACTGGATTCTGTTGTTGAAGAAAGCAGT
AATACATCTGCTGTGCAGAGTTCTGATTTAAAAGGGAATGGTATTCAGGA
AAAAGCTGTTCCTGGACATCCTATTTGTCCACCAGAGACATCTGCCACCG
CATCAGAAAGTGCATCATTTCGGTCAAaggtacaattttttttaatgttc
attGGAGGTGTATTTTGCTACACATATCTCTAGTTTTGATtgtatgaatt
tgaaatttcagACCAAGTGGCCAGAACAGTCTGAGGAGCTTTTAGGTTTA
ATTGTAAACTCACTAAGAGCTTTGGATGGGGCTGTTCCTCAAGGCTGTCC
AGAACCAAGACGTCGGCCTCAATCTGCACAAAAAATTACTCTTGTATTGG
ACAAAGCTCCTAAGCATTTGCAAGCTGACCTTGTTGCTTTGGTACCTAAA
TTGGTTGAGCAGTCTGAACATCCACTTGCTGCCTATGCACTTCTTGAGCG
TCTTCAAAAGACAGATGCAGAACCTACTTTACGAATACCAGTGagaaact
aatattttttttcttccaaaataccttatttgaattgttttgtcACATGC
ATTAATTCAGGGAGCAATCCTAATGTAGTTACACTTGTGCTGCTGTTCCA
CCTCTGTGAACATGACGCCAAATATGGTTGCATTGGTTTTCTCCTATTAA
TGCCATTCTATTTTTCAGGTTTTTGGGGCTCTTAGTCAATTGGAGTGTGG
TAGTGAAGTGTGGGAACGCATTCTGTTTCAGTCATTTGAGCTTTTGAATG
ACTCAAATGATGAACCCCTTGCTACAACGATAGATTTTATATTCAAAGCG
GCATCTCAATGTCAACACCTCCCTGAAGCAGTAAGCTTTGAAGATAAATA
GTTGGGAATTGCACCATGTTACactgtttataatttatttaatgcaCTGT
CTATGCAAAAATGTTCTCACTAGCATTCAATAATGCTTTGCCACATCATT
TAATGAGCTTTACATCTTGTGAAATTGTTAGTATTGTCAAAATCATTAAA
CATAACTTAAAAATGGATGTTTATTGTGTAAAAGTTGTAAGAAAACAAAT
CATCAAATGTTTCAAGAAGCATTTGTAACATGATTTCCCCTTTATGCAGG
TTAGGTCTGTTCGTGTCAGGCTGAAAAATCTAGGTCTTGAGGTGTCACCT
TGCGTCCTTGACTTTTTAAGTAAGACTATAAATAGTTGGGGGGATGTTGC
TGAAACCATACTCAGGGACATTGATTGTGACGATGACTATGGTGACAATT
GCTCAGCTCTTCCATGCGGTATTTTCTTATTCGGTGAACATGGCACTTCT
CCCAGTGGACTgcatgtgattgatgagcaggCTTATCAAGCTAGTCGTCA
TTTTTctgatatttatatattgtttgagATGTTATCCATTCCTTGCCTTG
TTGCTGAAGCTTCCCAAACATTTGAGAGAGCTGTAGCTCGAGGTGCAATA
AGTGCTCAGTCTGTAGCCCTGGTATTGCAAAGCCGTCTTTCCCAAAGTTT
GAGTAATAATGGAAGATATGTTTCTGAAAATTTCCAACATACAGATGGTT
CTACAGAGGGAGATGCCTGTGAGCAATTGGGAGTTCAGAGGGATGATTAT
ACTTCTGTTCTTGGCCTTGCTGAAAATTTGGCCCTCTCTATAGATCCATG
CGTGAAAGAGTTTGTTAAACTGCTCTACATGATAATGTTTAGATGGTTTG
CCAATGAATCTTATAGGGGGAGGATGCTGAAGAGGCTTGTTGACCGTGCC
ACTAGCAATACTGACAGTGGTCGCGAAGTAGATTTTGATTTGGATATATT
GGTTACTTTGGTCTGTGAGGAGCAGGAGTTTATCAGGCCTGTTTTGAGTA
TGATGCGTGAAGTTGCTGAACTTGCAAATGTGGACAGGGCTGCACTATGG
CACCAGTTGTGTGCTAGCGAGGATGAAATTATTCGCATTCGTGAAGAAAG
CAAAACTGAGATTTCTAATATGGCTAAGGAAAAAGCTAATATATCACAAA
AGCTAAGTGAATCTGAAGTGACGAACAATCGATTGAAGGTATTTCAATAC
TTAGTTGATAACATACTGTGGTTACCTCATGTTAATTGCTAATGGAGAAT
TTAGGTCTAACGCACTTCATGATTCAACAGTCTGAAATGAGGGCTGAGAT
GGATCGATTTTCTCGGGAAAAGAAGGAACTAGCTGAACAAGCTCAAGAAG
TTGAGAGTCAGCTTGAATGGCTTCGCTCAGAACGTGATGATGAAATTGCA
AAGCTCTCTGCAGAGAAGAAAGCACTTCATGACCGTTTACATGATGCAGA
GACACAACTTTCTCAGTTGAAGTCTCGGAAACGTGATGAATTAaaggtat
tttttaaaaagtttgattttctacattgaaaataaaaaaataaatgtcat
CTATGCTAATTTTAAACACTGCACTGCACAATACCTTTTATGCTTATGAT
GATTCTTACATTTTTTTGAGTGCATCTTGAACCTGTTAAATTTTACTCAT
TTTCTacattgaaagaaagaaaattgttcAGCTATGCTAATTTTAAACGC
TGTGCACTGCACAATAACTTTTATGCTTATAATGAttattcttacatttt
tttGAGTGCATCTTGAAGGCAATACCAGTtaaatttttctcatttttggt
GTATATGTAAGTGTACTTATGGATCTTTTTAAATCCAAGGAATCTATATG
CTCAATCTAGGGGAATCATGGCATTTACAATCTTCAGTATGAAATTTACT
ACTGTTTTTGCTTTATCTGACAACTTCACCTTCGATTCTTGCTATCTTCC
CCCTCTTTCAATCCTTCCTATAAACTCTGGTATGGGCGAATGTTATCCAT
GCTTTGTTTTCGCTAATTCATGAAAGATGGTCTTCAGCTATTAGTTCTAC
CTAGCTTTTCAGCTGACAGGTTGCTCCTATGTTAGGAAGGAGTTTGATCC
TACCTGGTGCCATACGTCTAATTAAATACTAGTTTCAGTACAAAGTCTGA
GTGGGCTCTCATACTTTTTCCAACCTTCAAGTCCAAAGTTTTTTGTGTGT
AAGGGGGTATTACTGGTATAAGTCATTCCTAGGCTTCCATTAATTGGGCT
GGATCTACTCTAGCACCATATCCCTCCAGCTTGCTCCATCCTTTTTATCT
CTccccttcttcctctctttctctctttttgctTGCTGCAGAGGATCCAA
TTTGCCAATTATCCGCTTGAGCTTTTAAAAGAGTTGGTCCTTGACTTGAA
TCATGAGCTATAAAGTTCTGTTTAGTCATCCTTTATTTCATTTGTCAAAT
TACTTGATAGAAAATAACATgattaactattttatattcTCTTTTACTTG
TCGATTATCATCAAAATCTCATTGGTGATATTTATGCATCAACAGGTGTT
TGAAATAATCCTATAGTGATgatattcatatattttctgTGGCACTCTTA
GAAATGGTGGGCCAGTGAAAGGAGCTTAATTTTGGTTCTGAATTGATTAG
TGGGGTTGTTTGgtttaagatttttttctttactttttaattacaaaatg
ttacatttgttttcattttggtgCCAGtgaaataatttgttttctattcT
CATTTCTGTTGAAAATCAATTGTTTTCATTTAGtgaaaacaacttttcat
agttttctatttctattttcctttttcaatgtCTACAgataaacttttga
aaacaGGAAGAAAGTGAAAACAGCGTGGCTTTTTGTAACTTGTATCTAAA
GTTAAAACAGGAAATGAAAACaagaagttttatttttcaaattagatGAC
CCTTAATTTTTCATTGTGTATAATGGGctcaaattgaaaattaatgCGAA
TTTTATTACATACAGAAAGTAGTCAAGGAGAAAAATGCCCTTGCCGAGAG
ATTGAAGAATGCTGAAGCTGCACGCAAGAGATTTGATGAAGAACTGAAAA
GATTTGCAACAGAGAATGTGACTCGGGAGGAAATTCGGCAATCACTTGAA
GACGAAGTCCGTAGATTGACTCAAACGGTTGGACAAACTGAAGGGGAAAA
GCGTGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCA
TGGAATCAAAGTTGCAAGCTTGCCAGGTCTGTATTGACATAGAATTTGTA
CTTTTCGTACTGTTTTTATCATTTGCTAATTATTTATCGCCTTGTATGTT
TTCATGTTCAACTTATATGAGTTAAACCTATTTCATCTGTGGAACTAGCT
TTTTCAACTAGTTTGATATGTAATGTATTGCCTGTCGTGCTTAGTTGGAT
TTTGAGCAGTTTTTTGTTGGGTATCCTTAAAATCATCCTTGAGTGGATAC
AATTAATGGATAATGATACACACCTTTTTTTCGAAAGACACTTATTTtac
actttttatttctttctatctcTCTCTAATCATATCACGTATCCTTAaag
ctaattttttttctctataggTGTAGATCATCATTTAGGTGTCTAAAACC
TTTTCTTGTTAAATGGTAGATTgctttgttcttcttttttctccaaTTTA
TAGCTCAAAAATCATGGTAGTTCAAACTTCAAAATCAGCTTTTTTGAAGT
TGTACTTTTCTGGATTGGCGAAAGTAATGTAAAATGTCCATGTTACCATC
ATTAGTAACGATCCTGTCATTGCTACTAGTAACGATCTTCAGAGGATGTT
TGAAATTGATGCTAGTGTCTGTTGTTATCTGTGGCCTATACTGTAGGTTA
ATGGCCTTTGTTTTCCCTCTGCAGCAATATATTCACACACTTGAGGCCTC
ACTCCAGGAGGAAATGTCAAGACATGCCCCTCTATACGGTGCTGGTCTGG
AGGCTTTGTCATTGAAAGAGTTGGAAACACTATCACGTATTCATGAAGAT
GGGCTTAGGCAGATCCATGCCATTCAACAGCGTAAAGGGAGTCCTGCAGG
GAGCCCTCTTGTGAGCCCCCATGCTCTCCCTCACACCCATGGATTGTATC
CTGCTGCCTCGCTTCCTATGGCTGTGGGACTACCTCCCTCAATCATCCCA
AATGGTGTGGGGATCCACAGCAACGGCCATGTGAATGGTGCAGTTGGACC
CTGGTTTAACCACTCTTGA

protein sequence of LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1

>LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=1676bp
MKQASAEAVPSLSSTPSFTEAATSSSSSAAAAEDLAVGSRDGGGGAQETV
AVDRRGEYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQ
ALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHR
FSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILILNESVNFTR
DNNELQSSSSSSSSTSSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQK
IMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVVLSDRSCWC
LFRMSVLNQRPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGV
DSGFLVDDTAVFSTSFHVIKEFSSFSKNGSVIAGRSGSGARKSDGHIGKF
TWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPC
HLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAA
KDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDS
ELSSSGSPLDNSGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELR
IGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKES
SICTKTWNNSVLQFMKVSDMLEVDAGFLVRDTVVFVCEILDCCPWFEFSD
LEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTY
GDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSG
SCDGKKATKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEVGP
VADSVDACSKPSSDGSGAATPLECERESGTMESARVPGNERLDSVVEESS
NTSAVQSSDLKGNGIQEKAVPGHPICPPETSATASESASFRSKTKWPEQS
EELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKITLVLDKAPKHLQADL
VALVPKLVEQSEHPLAAYALLERLQKTDAEPTLRIPVFGALSQLECGSEV
WERILFQSFELLNDSNDEPLATTIDFIFKAASQCQHLPEAVRSVRVRLKN
LGLEVSPCVLDFLSKTINSWGDVAETILRDIDCDDDYGDNCSALPCGIFL
FGEHGTSPSGLHVIDEQAYQASRHFSDIYILFEMLSIPCLVAEASQTFER
AVARGAISAQSVALVLQSRLSQSLSNNGRYVSENFQHTDGSTEGDACEQL
GVQRDDYTSVLGLAENLALSIDPCVKEFVKLLYMIMFRWFANESYRGRML
KRLVDRATSNTDSGREVDFDLDILVTLVCEEQEFIRPVLSMMREVAELAN
VDRAALWHQLCASEDEIIRIREESKTEISNMAKEKANISQKLSESEVTNN
RLKSEMRAEMDRFSREKKELAEQAQEVESQLEWLRSERDDEIAKLSAEKK
ALHDRLHDAETQLSQLKSRKRDELKKVVKEKNALAERLKNAEAARKRFDE
ELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAY
IDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSLKELETLSR
IHEDGLRQIHAIQQRKGSPAGSPLVSPHALPHTHGLYPAASLPMAVGLPP
SIIPNGVGIHSNGHVNGAVGPWFNHS

mRNA from alignment at Chr_4-CM003374.1:31231601..31240569+

Legend: polypeptidestart_codonexonCDSintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220400; organism=Vigna angularis; type=mRNA; length=8969bp; location=Sequence derived from: Chr_4-CM003374.1:31231601..31240569+ (Vigna angularis
ATGAAGCAAGCTTCGGCCGAGGCAGTTCCTTCCCTATCTTCTACGCCGTC
GTTCACGGAGGCGGCAACATCGTCGTCATCCTCCGCCGCTGCGGCGGAGG
ACCTGGCAGTGGGGTCGCGGGACGGTGGCGGCGGGGCTCAGGAGACGGTG
GCGGTGGATCGGCGAGGCGAGTACTCCGCCGTGTGTCGATGGACGGTGCA
CAATTTCCCGAGAATAAAGGCTAGGGCACTGTGGAGCAAATACTTCGAGG
TAGGCGGTTACGATTGTCGGTTGCTAATATATCCTAAGGGTGACTCACAG
GCGCTTCCTGGGTACATCTCCATCTACCTCCAAATCATGGACCCTCGCGG
TACCTCCTCTTCCAAATGGGACTGTTTCGCGAGTTATCGGTTGGCAATCG
TGAACGTAGCCGACGATTCCAAAACCATTCACCGAGATTCCTGGCACCGA
TTCTCCAGTAAGAAGAAATCACACGGTTGGTGTGATTTCACACCCTCTTC
CACCGTTTTCGACCCCAAATTGGGATACCTCTTCAATACGGATTCCGTTT
TGATCACTGCGGATATTCTCATTCTCAATGAGTCCGTTAATTTCACGCGG
GACAACAATGAGTTGCAGTCCTCATCTTCGTCCTCGTCTTCGACAAGTTC
CTCCGTTGTTGCAGGTCCCGTGTCTGATGTGTTGAGTGGTAAGTTCACTT
GGAAAGTGCATAATTTCAGTCTGTTTAAGGAGATGATCAAGACACAGAAA
ATAATGAGCCCGGTGTTTCCTGCGGGGGAATGTAATTTGAGAATAAGTGT
GTACCAGAGCTCTGTGAATGGGGTTGAGTATTTGTCTATGTGTCTGGAGA
GCAAGGACACGGATAAGACTGTGGTGTTATCTGATAGGAGTTGTTGGTGT
TTGTTTAGGATGTCTGTGTTGAACCAGAGGCCTGGTTCCAATCACATGCA
TAGGGATTCTTATGGCCGGTTTGCGGCTGATAATAAGAGCGGTGACAATA
CCAGCTTGGGATGGAATGATTACATGAAAATGTCGGATTTTATCGGTGTG
GATTCGGGGTTTTTGGTGGATGACACCGCTGTTTTTAGCACCTCATTTCA
TGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAATGGTTCTGTGATTGCCG
GGAGAAGTGGGAGTGGTGCTAGGAAGTCTGATGGGCATATTGGAAAGTTC
ACTTGGAGAATTGAGAATTTTACTAGATTGAAGGATTTGCTAAAGAAGAG
GAAAATCACGGGTCTGTGCATCAAGAGCCGGAGGTTTCAGATTGGTAATA
GGGATTGTCGACTTATTGTTTACCCTCGAGGTGTGCAATACTTTTGCTGT
GCAaatctattttcattttctgtgaACCACTTTCTTAGGCCTATTAAATA
TTTGCGGTATTGTTTGTGAGTCAAAACTCCATTAGATGTGATATTGTACG
CATTTTAGTGCAATTATTGCCTATATTGGTAGAATTGAAAGGGCATTCTT
GCTGCAGTTTTATCAGCTATTCTGTCTTTGAAATTTTCATTGTATCTGAT
ATTTCATGCTTGTAGTTGCATATCTACTGGTACCACCATTAGCTTAATTG
ATAATCCAGATATTGGGTTTTGATGTGTGAATATAATAGTCACTGAGTAT
ATTTAAATGTAGCGAATACTTTTAGATTTTGATAAAAGATGGAGTCTGAT
GAATTTTTATGTGATTTTGATGCTATCAGGGCAGTCTCAGCCACCATGTC
ACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGAT
TGGAGTTGTTTTGTTAGTCATCGTTTATCAGTTGTGAACCAGAAGATGGA
GGATAAATCTGTCACCAAGGAATCTCAGAACCGCTACTCAAAAGCTGCAA
AGGATTGGGGTTGGCGTGAATTTGTGACACTCACCAGTCTCTTTGATCAA
GATTCAGGTTTTCTTGTCCAGGACACTGTCATATTCTCTGCTGAGGTTCT
TATATTGAAGGAGACATCAATAATGCAGGATTTTACTGAGCATGATTCTG
AGTTGAGCAGCAGTGGCTCTCCTCTGGATAATTCTGGCAAAAGAAGTTCA
TTTACATGGAAAGTTGAGAATTTCTTGTCTTTCAAGGAAATAATGGAGAC
ACGAAAAATCTTCAGTAAATTCTTTCAAGCTGGTGGATGTGAACTTCGAA
TTGGTAGATGTTCTTGCATAAATTATCTTCTGCATTTTATTCACTGGTAG
TAGTAGCAGTAGtaaacttttatgtttttattctttgatTAAGCTTACTT
TTCCATGACCCAGGTGTATATGAGTCGTTTGACACgatatgtatttattt
agagAGCGATCAGGCTGTTGGTAGTGATCCCGATAAAAATTTCTGGGTGA
GATACAGGATGGCTGTTGTGAATCAAAAGAACCCAGCCAAGACAGTGTGG
AAAGAATCCTCTATCTGCACAAAGACGTGGAATAATTCTGTTTTACAATT
CATGAAGGTGTCTGATATGTTAGAAGTGGATGCAGGATTTCTTGTACGTG
ACACTGTTGTTTTTGTATGTGAAATATTGGATTGCTGTCCTTGGTTTGAG
TTTTCCGATTTAGAGGTAAGTCCTTATGGATTGCTTGTCTCCGTGTTACA
TTGTACTTACAAATATCATTTGATAGAGACCAAATATTCTTGCCCCATGT
TTTAAGACTTTCCTCCTACCATCATAGGATGACCTATTCTTGACTTTAGA
GATGAGACTACATGTAATCCTGTATTCATAGTTATTGATTTGAACTGGCT
CTTCTGCCTCTGACATGTCactaatttaacatataatatctttttttatg
aCTCATTTTTAATGTAAGATCGGAACAAGCCAGTTAGGAAATATGGCCTC
TTCCTTGGAACTTTTGCTTGTGATTAGCTGATAAGATGCATGGAACAAGC
TGATAAGTCACGAGTTACAGAAGTTGATTAATGCTTCAGTTCATAATTTT
GCATCCCTTGAACTTCTTATTGTACAATAAAAATTTGTAAGCAGATTTCT
ATCCCATACCTGAGCCATATGATATGTTATGATTATGTCTTatgtgaaag
ataaaaatgGTTATATGTATTACATCTCAGCTTCTCACATGTTGTAAAAT
CGGGATTTTGTTATGGATTCTATAATACCTACttgttgtattaaattttg
GTTGCTCTTATCATACGGTTGCAGACACATCATCTGATATTTTCTTCAAT
ATTCAGGTTTTAGCATCAGAGGATGATCAAGATGCATTGACAACTGACCC
TGATGAGCTCATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGATGAGG
AAGATATTTTCAGAAATCTTCTTTCTAGAGCTGGATTCCATTTAACATAT
GGAGATAATCCTTCTCAGCCACAAGTTACTTTAAGGGAGAAACTTCTAAT
GGATGCTGGTGCAATTGCAGGGTTTCTTACTGGTCTTCGAGTCTATCTTG
ATGATCCTGCAAAAGTGAAGCGCCTGCTTCTACCTACCAAGCTGTCTGGT
AGTTGTGATGGGAAGAAGGCCACCAAAGCTGATGAATCTTCCCCAAGTTT
GATGAATTTGCTGATGGGAGTTAAAGTCTTGCAGCAAGCTATCATAGATT
TACTATTAGATATAATGGTCGAGTGCTGTCAACCTTCTGAAGTAGGTCCT
GTTGCTGATTCTGTTGATGCATGTTCTAAACCTTCTTCAGATGGAAGTGG
AGCTGCTACTCCTCTTGAGTGTGAAAGAGAAAGTGGAACAATGGAGTCTG
CACGAGTTCCTGGTAATGAGAGACTGGATTCTGTTGTTGAAGAAAGCAGT
AATACATCTGCTGTGCAGAGTTCTGATTTAAAAGGGAATGGTATTCAGGA
AAAAGCTGTTCCTGGACATCCTATTTGTCCACCAGAGACATCTGCCACCG
CATCAGAAAGTGCATCATTTCGGTCAAaggtacaattttttttaatgttc
attGGAGGTGTATTTTGCTACACATATCTCTAGTTTTGATtgtatgaatt
tgaaatttcagACCAAGTGGCCAGAACAGTCTGAGGAGCTTTTAGGTTTA
ATTGTAAACTCACTAAGAGCTTTGGATGGGGCTGTTCCTCAAGGCTGTCC
AGAACCAAGACGTCGGCCTCAATCTGCACAAAAAATTACTCTTGTATTGG
ACAAAGCTCCTAAGCATTTGCAAGCTGACCTTGTTGCTTTGGTACCTAAA
TTGGTTGAGCAGTCTGAACATCCACTTGCTGCCTATGCACTTCTTGAGCG
TCTTCAAAAGACAGATGCAGAACCTACTTTACGAATACCAGTGagaaact
aatattttttttcttccaaaataccttatttgaattgttttgtcACATGC
ATTAATTCAGGGAGCAATCCTAATGTAGTTACACTTGTGCTGCTGTTCCA
CCTCTGTGAACATGACGCCAAATATGGTTGCATTGGTTTTCTCCTATTAA
TGCCATTCTATTTTTCAGGTTTTTGGGGCTCTTAGTCAATTGGAGTGTGG
TAGTGAAGTGTGGGAACGCATTCTGTTTCAGTCATTTGAGCTTTTGAATG
ACTCAAATGATGAACCCCTTGCTACAACGATAGATTTTATATTCAAAGCG
GCATCTCAATGTCAACACCTCCCTGAAGCAGTAAGCTTTGAAGATAAATA
GTTGGGAATTGCACCATGTTACactgtttataatttatttaatgcaCTGT
CTATGCAAAAATGTTCTCACTAGCATTCAATAATGCTTTGCCACATCATT
TAATGAGCTTTACATCTTGTGAAATTGTTAGTATTGTCAAAATCATTAAA
CATAACTTAAAAATGGATGTTTATTGTGTAAAAGTTGTAAGAAAACAAAT
CATCAAATGTTTCAAGAAGCATTTGTAACATGATTTCCCCTTTATGCAGG
TTAGGTCTGTTCGTGTCAGGCTGAAAAATCTAGGTCTTGAGGTGTCACCT
TGCGTCCTTGACTTTTTAAGTAAGACTATAAATAGTTGGGGGGATGTTGC
TGAAACCATACTCAGGGACATTGATTGTGACGATGACTATGGTGACAATT
GCTCAGCTCTTCCATGCGGTATTTTCTTATTCGGTGAACATGGCACTTCT
CCCAGTGGACTgcatgtgattgatgagcaggCTTATCAAGCTAGTCGTCA
TTTTTctgatatttatatattgtttgagATGTTATCCATTCCTTGCCTTG
TTGCTGAAGCTTCCCAAACATTTGAGAGAGCTGTAGCTCGAGGTGCAATA
AGTGCTCAGTCTGTAGCCCTGGTATTGCAAAGCCGTCTTTCCCAAAGTTT
GAGTAATAATGGAAGATATGTTTCTGAAAATTTCCAACATACAGATGGTT
CTACAGAGGGAGATGCCTGTGAGCAATTGGGAGTTCAGAGGGATGATTAT
ACTTCTGTTCTTGGCCTTGCTGAAAATTTGGCCCTCTCTATAGATCCATG
CGTGAAAGAGTTTGTTAAACTGCTCTACATGATAATGTTTAGATGGTTTG
CCAATGAATCTTATAGGGGGAGGATGCTGAAGAGGCTTGTTGACCGTGCC
ACTAGCAATACTGACAGTGGTCGCGAAGTAGATTTTGATTTGGATATATT
GGTTACTTTGGTCTGTGAGGAGCAGGAGTTTATCAGGCCTGTTTTGAGTA
TGATGCGTGAAGTTGCTGAACTTGCAAATGTGGACAGGGCTGCACTATGG
CACCAGTTGTGTGCTAGCGAGGATGAAATTATTCGCATTCGTGAAGAAAG
CAAAACTGAGATTTCTAATATGGCTAAGGAAAAAGCTAATATATCACAAA
AGCTAAGTGAATCTGAAGTGACGAACAATCGATTGAAGGTATTTCAATAC
TTAGTTGATAACATACTGTGGTTACCTCATGTTAATTGCTAATGGAGAAT
TTAGGTCTAACGCACTTCATGATTCAACAGTCTGAAATGAGGGCTGAGAT
GGATCGATTTTCTCGGGAAAAGAAGGAACTAGCTGAACAAGCTCAAGAAG
TTGAGAGTCAGCTTGAATGGCTTCGCTCAGAACGTGATGATGAAATTGCA
AAGCTCTCTGCAGAGAAGAAAGCACTTCATGACCGTTTACATGATGCAGA
GACACAACTTTCTCAGTTGAAGTCTCGGAAACGTGATGAATTAaaggtat
tttttaaaaagtttgattttctacattgaaaataaaaaaataaatgtcat
CTATGCTAATTTTAAACACTGCACTGCACAATACCTTTTATGCTTATGAT
GATTCTTACATTTTTTTGAGTGCATCTTGAACCTGTTAAATTTTACTCAT
TTTCTacattgaaagaaagaaaattgttcAGCTATGCTAATTTTAAACGC
TGTGCACTGCACAATAACTTTTATGCTTATAATGAttattcttacatttt
tttGAGTGCATCTTGAAGGCAATACCAGTtaaatttttctcatttttggt
GTATATGTAAGTGTACTTATGGATCTTTTTAAATCCAAGGAATCTATATG
CTCAATCTAGGGGAATCATGGCATTTACAATCTTCAGTATGAAATTTACT
ACTGTTTTTGCTTTATCTGACAACTTCACCTTCGATTCTTGCTATCTTCC
CCCTCTTTCAATCCTTCCTATAAACTCTGGTATGGGCGAATGTTATCCAT
GCTTTGTTTTCGCTAATTCATGAAAGATGGTCTTCAGCTATTAGTTCTAC
CTAGCTTTTCAGCTGACAGGTTGCTCCTATGTTAGGAAGGAGTTTGATCC
TACCTGGTGCCATACGTCTAATTAAATACTAGTTTCAGTACAAAGTCTGA
GTGGGCTCTCATACTTTTTCCAACCTTCAAGTCCAAAGTTTTTTGTGTGT
AAGGGGGTATTACTGGTATAAGTCATTCCTAGGCTTCCATTAATTGGGCT
GGATCTACTCTAGCACCATATCCCTCCAGCTTGCTCCATCCTTTTTATCT
CTccccttcttcctctctttctctctttttgctTGCTGCAGAGGATCCAA
TTTGCCAATTATCCGCTTGAGCTTTTAAAAGAGTTGGTCCTTGACTTGAA
TCATGAGCTATAAAGTTCTGTTTAGTCATCCTTTATTTCATTTGTCAAAT
TACTTGATAGAAAATAACATgattaactattttatattcTCTTTTACTTG
TCGATTATCATCAAAATCTCATTGGTGATATTTATGCATCAACAGGTGTT
TGAAATAATCCTATAGTGATgatattcatatattttctgTGGCACTCTTA
GAAATGGTGGGCCAGTGAAAGGAGCTTAATTTTGGTTCTGAATTGATTAG
TGGGGTTGTTTGgtttaagatttttttctttactttttaattacaaaatg
ttacatttgttttcattttggtgCCAGtgaaataatttgttttctattcT
CATTTCTGTTGAAAATCAATTGTTTTCATTTAGtgaaaacaacttttcat
agttttctatttctattttcctttttcaatgtCTACAgataaacttttga
aaacaGGAAGAAAGTGAAAACAGCGTGGCTTTTTGTAACTTGTATCTAAA
GTTAAAACAGGAAATGAAAACaagaagttttatttttcaaattagatGAC
CCTTAATTTTTCATTGTGTATAATGGGctcaaattgaaaattaatgCGAA
TTTTATTACATACAGAAAGTAGTCAAGGAGAAAAATGCCCTTGCCGAGAG
ATTGAAGAATGCTGAAGCTGCACGCAAGAGATTTGATGAAGAACTGAAAA
GATTTGCAACAGAGAATGTGACTCGGGAGGAAATTCGGCAATCACTTGAA
GACGAAGTCCGTAGATTGACTCAAACGGTTGGACAAACTGAAGGGGAAAA
GCGTGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCA
TGGAATCAAAGTTGCAAGCTTGCCAGGTCTGTATTGACATAGAATTTGTA
CTTTTCGTACTGTTTTTATCATTTGCTAATTATTTATCGCCTTGTATGTT
TTCATGTTCAACTTATATGAGTTAAACCTATTTCATCTGTGGAACTAGCT
TTTTCAACTAGTTTGATATGTAATGTATTGCCTGTCGTGCTTAGTTGGAT
TTTGAGCAGTTTTTTGTTGGGTATCCTTAAAATCATCCTTGAGTGGATAC
AATTAATGGATAATGATACACACCTTTTTTTCGAAAGACACTTATTTtac
actttttatttctttctatctcTCTCTAATCATATCACGTATCCTTAaag
ctaattttttttctctataggTGTAGATCATCATTTAGGTGTCTAAAACC
TTTTCTTGTTAAATGGTAGATTgctttgttcttcttttttctccaaTTTA
TAGCTCAAAAATCATGGTAGTTCAAACTTCAAAATCAGCTTTTTTGAAGT
TGTACTTTTCTGGATTGGCGAAAGTAATGTAAAATGTCCATGTTACCATC
ATTAGTAACGATCCTGTCATTGCTACTAGTAACGATCTTCAGAGGATGTT
TGAAATTGATGCTAGTGTCTGTTGTTATCTGTGGCCTATACTGTAGGTTA
ATGGCCTTTGTTTTCCCTCTGCAGCAATATATTCACACACTTGAGGCCTC
ACTCCAGGAGGAAATGTCAAGACATGCCCCTCTATACGGTGCTGGTCTGG
AGGCTTTGTCATTGAAAGAGTTGGAAACACTATCACGTATTCATGAAGAT
GGGCTTAGGCAGATCCATGCCATTCAACAGCGTAAAGGGAGTCCTGCAGG
GAGCCCTCTTGTGAGCCCCCATGCTCTCCCTCACACCCATGGATTGTATC
CTGCTGCCTCGCTTCCTATGGCTGTGGGACTACCTCCCTCAATCATCCCA
AATGGTGTGGGGATCCACAGCAACGGCCATGTGAATGGTGCAGTTGGACC
CTGGTTTAACCACTCTTGA

Coding sequence (CDS) from alignment at Chr_4-CM003374.1:31231601..31240569+

>LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220400_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220400; organism=Vigna angularis; type=CDS; length=5031bp; location=Sequence derived from: Chr_4-CM003374.1:31231601..31240569+ (Vigna angularis
ATGAAGCAAGCTTCGGCCGAGGCAGTTCCTTCCCTATCTTCTACGCCGTC
GTTCACGGAGGCGGCAACATCGTCGTCATCCTCCGCCGCTGCGGCGGAGG
ACCTGGCAGTGGGGTCGCGGGACGGTGGCGGCGGGGCTCAGGAGACGGTG
GCGGTGGATCGGCGAGGCGAGTACTCCGCCGTGTGTCGATGGACGGTGCA
CAATTTCCCGAGAATAAAGGCTAGGGCACTGTGGAGCAAATACTTCGAGG
TAGGCGGTTACGATTGTCGGTTGCTAATATATCCTAAGGGTGACTCACAG
GCGCTTCCTGGGTACATCTCCATCTACCTCCAAATCATGGACCCTCGCGG
TACCTCCTCTTCCAAATGGGACTGTTTCGCGAGTTATCGGTTGGCAATCG
TGAACGTAGCCGACGATTCCAAAACCATTCACCGAGATTCCTGGCACCGA
TTCTCCAGTAAGAAGAAATCACACGGTTGGTGTGATTTCACACCCTCTTC
CACCGTTTTCGACCCCAAATTGGGATACCTCTTCAATACGGATTCCGTTT
TGATCACTGCGGATATTCTCATTCTCAATGAGTCCGTTAATTTCACGCGG
GACAACAATGAGTTGCAGTCCTCATCTTCGTCCTCGTCTTCGACAAGTTC
CTCCGTTGTTGCAGGTCCCGTGTCTGATGTGTTGAGTGGTAAGTTCACTT
GGAAAGTGCATAATTTCAGTCTGTTTAAGGAGATGATCAAGACACAGAAA
ATAATGAGCCCGGTGTTTCCTGCGGGGGAATGTAATTTGAGAATAAGTGT
GTACCAGAGCTCTGTGAATGGGGTTGAGTATTTGTCTATGTGTCTGGAGA
GCAAGGACACGGATAAGACTGTGGTGTTATCTGATAGGAGTTGTTGGTGT
TTGTTTAGGATGTCTGTGTTGAACCAGAGGCCTGGTTCCAATCACATGCA
TAGGGATTCTTATGGCCGGTTTGCGGCTGATAATAAGAGCGGTGACAATA
CCAGCTTGGGATGGAATGATTACATGAAAATGTCGGATTTTATCGGTGTG
GATTCGGGGTTTTTGGTGGATGACACCGCTGTTTTTAGCACCTCATTTCA
TGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAATGGTTCTGTGATTGCCG
GGAGAAGTGGGAGTGGTGCTAGGAAGTCTGATGGGCATATTGGAAAGTTC
ACTTGGAGAATTGAGAATTTTACTAGATTGAAGGATTTGCTAAAGAAGAG
GAAAATCACGGGTCTGTGCATCAAGAGCCGGAGGTTTCAGATTGGTAATA
GGGATTGTCGACTTATTGTTTACCCTCGAGGGCAGTCTCAGCCACCATGT
CACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGA
TTGGAGTTGTTTTGTTAGTCATCGTTTATCAGTTGTGAACCAGAAGATGG
AGGATAAATCTGTCACCAAGGAATCTCAGAACCGCTACTCAAAAGCTGCA
AAGGATTGGGGTTGGCGTGAATTTGTGACACTCACCAGTCTCTTTGATCA
AGATTCAGGTTTTCTTGTCCAGGACACTGTCATATTCTCTGCTGAGGTTC
TTATATTGAAGGAGACATCAATAATGCAGGATTTTACTGAGCATGATTCT
GAGTTGAGCAGCAGTGGCTCTCCTCTGGATAATTCTGGCAAAAGAAGTTC
ATTTACATGGAAAGTTGAGAATTTCTTGTCTTTCAAGGAAATAATGGAGA
CACGAAAAATCTTCAGTAAATTCTTTCAAGCTGGTGGATGTGAACTTCGA
ATTGGTGTATATGAGTCGTTTGACACgatatgtatttatttagagAGCGA
TCAGGCTGTTGGTAGTGATCCCGATAAAAATTTCTGGGTGAGATACAGGA
TGGCTGTTGTGAATCAAAAGAACCCAGCCAAGACAGTGTGGAAAGAATCC
TCTATCTGCACAAAGACGTGGAATAATTCTGTTTTACAATTCATGAAGGT
GTCTGATATGTTAGAAGTGGATGCAGGATTTCTTGTACGTGACACTGTTG
TTTTTGTATGTGAAATATTGGATTGCTGTCCTTGGTTTGAGTTTTCCGAT
TTAGAGGTTTTAGCATCAGAGGATGATCAAGATGCATTGACAACTGACCC
TGATGAGCTCATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGATGAGG
AAGATATTTTCAGAAATCTTCTTTCTAGAGCTGGATTCCATTTAACATAT
GGAGATAATCCTTCTCAGCCACAAGTTACTTTAAGGGAGAAACTTCTAAT
GGATGCTGGTGCAATTGCAGGGTTTCTTACTGGTCTTCGAGTCTATCTTG
ATGATCCTGCAAAAGTGAAGCGCCTGCTTCTACCTACCAAGCTGTCTGGT
AGTTGTGATGGGAAGAAGGCCACCAAAGCTGATGAATCTTCCCCAAGTTT
GATGAATTTGCTGATGGGAGTTAAAGTCTTGCAGCAAGCTATCATAGATT
TACTATTAGATATAATGGTCGAGTGCTGTCAACCTTCTGAAGTAGGTCCT
GTTGCTGATTCTGTTGATGCATGTTCTAAACCTTCTTCAGATGGAAGTGG
AGCTGCTACTCCTCTTGAGTGTGAAAGAGAAAGTGGAACAATGGAGTCTG
CACGAGTTCCTGGTAATGAGAGACTGGATTCTGTTGTTGAAGAAAGCAGT
AATACATCTGCTGTGCAGAGTTCTGATTTAAAAGGGAATGGTATTCAGGA
AAAAGCTGTTCCTGGACATCCTATTTGTCCACCAGAGACATCTGCCACCG
CATCAGAAAGTGCATCATTTCGGTCAAagACCAAGTGGCCAGAACAGTCT
GAGGAGCTTTTAGGTTTAATTGTAAACTCACTAAGAGCTTTGGATGGGGC
TGTTCCTCAAGGCTGTCCAGAACCAAGACGTCGGCCTCAATCTGCACAAA
AAATTACTCTTGTATTGGACAAAGCTCCTAAGCATTTGCAAGCTGACCTT
GTTGCTTTGGTACCTAAATTGGTTGAGCAGTCTGAACATCCACTTGCTGC
CTATGCACTTCTTGAGCGTCTTCAAAAGACAGATGCAGAACCTACTTTAC
GAATACCAGTTTTTGGGGCTCTTAGTCAATTGGAGTGTGGTAGTGAAGTG
TGGGAACGCATTCTGTTTCAGTCATTTGAGCTTTTGAATGACTCAAATGA
TGAACCCCTTGCTACAACGATAGATTTTATATTCAAAGCGGCATCTCAAT
GTCAACACCTCCCTGAAGCAGTTAGGTCTGTTCGTGTCAGGCTGAAAAAT
CTAGGTCTTGAGGTGTCACCTTGCGTCCTTGACTTTTTAAGTAAGACTAT
AAATAGTTGGGGGGATGTTGCTGAAACCATACTCAGGGACATTGATTGTG
ACGATGACTATGGTGACAATTGCTCAGCTCTTCCATGCGGTATTTTCTTA
TTCGGTGAACATGGCACTTCTCCCAGTGGACTgcatgtgattgatgagca
ggCTTATCAAGCTAGTCGTCATTTTTctgatatttatatattgtttgagA
TGTTATCCATTCCTTGCCTTGTTGCTGAAGCTTCCCAAACATTTGAGAGA
GCTGTAGCTCGAGGTGCAATAAGTGCTCAGTCTGTAGCCCTGGTATTGCA
AAGCCGTCTTTCCCAAAGTTTGAGTAATAATGGAAGATATGTTTCTGAAA
ATTTCCAACATACAGATGGTTCTACAGAGGGAGATGCCTGTGAGCAATTG
GGAGTTCAGAGGGATGATTATACTTCTGTTCTTGGCCTTGCTGAAAATTT
GGCCCTCTCTATAGATCCATGCGTGAAAGAGTTTGTTAAACTGCTCTACA
TGATAATGTTTAGATGGTTTGCCAATGAATCTTATAGGGGGAGGATGCTG
AAGAGGCTTGTTGACCGTGCCACTAGCAATACTGACAGTGGTCGCGAAGT
AGATTTTGATTTGGATATATTGGTTACTTTGGTCTGTGAGGAGCAGGAGT
TTATCAGGCCTGTTTTGAGTATGATGCGTGAAGTTGCTGAACTTGCAAAT
GTGGACAGGGCTGCACTATGGCACCAGTTGTGTGCTAGCGAGGATGAAAT
TATTCGCATTCGTGAAGAAAGCAAAACTGAGATTTCTAATATGGCTAAGG
AAAAAGCTAATATATCACAAAAGCTAAGTGAATCTGAAGTGACGAACAAT
CGATTGAAGTCTGAAATGAGGGCTGAGATGGATCGATTTTCTCGGGAAAA
GAAGGAACTAGCTGAACAAGCTCAAGAAGTTGAGAGTCAGCTTGAATGGC
TTCGCTCAGAACGTGATGATGAAATTGCAAAGCTCTCTGCAGAGAAGAAA
GCACTTCATGACCGTTTACATGATGCAGAGACACAACTTTCTCAGTTGAA
GTCTCGGAAACGTGATGAATTAaagAAAGTAGTCAAGGAGAAAAATGCCC
TTGCCGAGAGATTGAAGAATGCTGAAGCTGCACGCAAGAGATTTGATGAA
GAACTGAAAAGATTTGCAACAGAGAATGTGACTCGGGAGGAAATTCGGCA
ATCACTTGAAGACGAAGTCCGTAGATTGACTCAAACGGTTGGACAAACTG
AAGGGGAAAAGCGTGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATAT
ATTGATGGCATGGAATCAAAGTTGCAAGCTTGCCAGCAATATATTCACAC
ACTTGAGGCCTCACTCCAGGAGGAAATGTCAAGACATGCCCCTCTATACG
GTGCTGGTCTGGAGGCTTTGTCATTGAAAGAGTTGGAAACACTATCACGT
ATTCATGAAGATGGGCTTAGGCAGATCCATGCCATTCAACAGCGTAAAGG
GAGTCCTGCAGGGAGCCCTCTTGTGAGCCCCCATGCTCTCCCTCACACCC
ATGGATTGTATCCTGCTGCCTCGCTTCCTATGGCTGTGGGACTACCTCCC
TCAATCATCCCAAATGGTGTGGGGATCCACAGCAACGGCCATGTGAATGG
TGCAGTTGGACCCTGGTTTAACCACTCTTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002083	MATH/TRAF_dom
IPR008974	TRAF-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

LR48_mrnaVigan04g220400