LR48_mrnaVigan04g220800

Transcript Overview
NameLR48_mrnaVigan04g220800
Unique NameLR48_mrnaVigan04g220800_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length2635
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_4-CM003374.1supercontigChr_4-CM003374.1:31289111..31291745 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR536Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR547Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR553Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR597Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL046Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasL206Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR208Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR214Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0053Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0055Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0114Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0277Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0368Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0422Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0840Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0853Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1090Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1094Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR633Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR648Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR651Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR660Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0829Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0832Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0842Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0867Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR614Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR615Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR628Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR631Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR676Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR537Pisum sativum Cameor genome v1aPisum sativum
aspsR551Pisum sativum Cameor genome v1aPisum sativum
aspsR576Pisum sativum Cameor genome v1aPisum sativum
aspvR591Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR595Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR611Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR644Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR532Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR538Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR567Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR576Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR591Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR595Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR579Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR590Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR605Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR610Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR488Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR525Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR602Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR614Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR620Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR652Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR664Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR487Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR489Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR512Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR484Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR492Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR500Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR546Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.009G091300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014644366.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004501296.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-KK1_009411Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.2g182560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_01739Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_07865Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg55349.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.2g147320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_14768.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cr_02971.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun09g211600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan04g220800gene-LR48_Vigan04g220800_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220800LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289111..31289113LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289111..31289113Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289111..31289202LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289111..31289202Vigna angularisexon
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289287..31289330LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289287..31289330Vigna angularisexon
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290185..31290293LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290185..31290293Vigna angularisexon
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290483..31290546LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290483..31290546Vigna angularisexon
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290651..31290767LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290651..31290767Vigna angularisexon
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290873..31290981LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290873..31290981Vigna angularisexon
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31291651..31291745LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31291651..31291745Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289203..31289286LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289203..31289286Vigna angularisintron
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289331..31290184LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31289331..31290184Vigna angularisintron
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290294..31290482LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290294..31290482Vigna angularisintron
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290547..31290650LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290547..31290650Vigna angularisintron
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290768..31290872LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290768..31290872Vigna angularisintron
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290982..31291650LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31290982..31291650Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS2179CDS2179_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31291743..31291745LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:31291743..31291745Vigna angularisstop_codon


Homology
[Close]
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: Y4213_ARATH (ER membrane protein complex subunit 7 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g32130 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.859e-84
Identity = 130/177 (73.45%), Postives = 152/177 (85.88%), Query Frame = 1 
Query:   85 ATGSTEGYTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLSEFVLEPLRDEQYYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRNQGVPSLASLLPGA 615
            ++GS + YTI GRV++P+     +    K SN+KVILNGGQ VTFLRPDGYF+FH VPAGTHLIEV A+GYFFSPVRVDVSARH GK+QA LTE RR L+E VLEPLR EQYYE+REPFS+MS+VKSPMGLMVGFM++VVFLMPKLMEN+DPEEM+ AQE+MR+QGVPSL SLLP +
Sbjct:   27 SSGSEDSYTITGRVRVPASTVIGHA--AKFSNIKVILNGGQHVTFLRPDGYFTFHKVPAGTHLIEVYALGYFFSPVRVDVSARHRGKVQATLTETRRSLTELVLEPLRAEQYYEMREPFSVMSIVKSPMGLMVGFMVVVVFLMPKLMENIDPEEMKSAQEQMRSQGVPSLTSLLPAS 201
[Close]
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: EMC7_XENTR (ER membrane protein complex subunit 7 OS=Xenopus tropicalis OX=8364 GN=emc7 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.290e-19
Identity = 55/173 (31.79%), Postives = 97/173 (56.07%), Query Frame = 1 
Query:   79 SPATGSTEGYTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLSEFVLEPLRDE-------QYYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRN 576
            SP +GS + + + GR  +P V  ++++     +  +V+++G + V FLR DG F  H+VP+G++++EV +  + F PVRVD++++  GK++A    N    SE V  P   +        Y+  RE +     + +PM +M+   L++  L+PK++   DP EMRR  E+  N
Sbjct:   34 SPGSGS-DKFKVEGRAVVPGVRPQDWV-----NTARVLVDGEEHVGFLRTDGSFVVHDVPSGSYVVEVISPAHRFEPVRVDITSK--GKMRARYV-NHIKTSEVVRLPYPLQMKSSGPPSYFIKRETWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-EMRREMEQSMN 196
[Close]
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: EMC7_MACFA (ER membrane protein complex subunit 7 OS=Macaca fascicularis OX=9541 GN=EMC7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.417e-18
Identity = 52/164 (31.71%), Postives = 91/164 (55.49%), Query Frame = 1 
Query:  106 YTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLSEFVLEPLRDE-------QYYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRN 576
            + I GR  +P V  +++I     S  +V+++G + V FL+ DG F  H++P+G++++EV +  Y F PVRVD++++  GK++A    N    SE V  P   +        Y+  RE +     + +PM +M+   L++  L+PK++   DP +MRR  E+  N
Sbjct:   45 FKIEGRAVVPGVKPQDWI-----SAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRFDPVRVDITSK--GKMRARYV-NHIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQSMN 199
[Close]
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: EMC7_HUMAN (ER membrane protein complex subunit 7 OS=Homo sapiens OX=9606 GN=EMC7 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.667e-18
Identity = 52/164 (31.71%), Postives = 91/164 (55.49%), Query Frame = 1 
Query:  106 YTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLSEFVLEPLRDE-------QYYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRN 576
            + I GR  +P V  +++I     S  +V+++G + V FL+ DG F  H++P+G++++EV +  Y F PVRVD++++  GK++A    N    SE V  P   +        Y+  RE +     + +PM +M+   L++  L+PK++   DP +MRR  E+  N
Sbjct:   45 FKIEGRAVVPGVKPQDWI-----SAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRFDPVRVDITSK--GKMRARYV-NYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQSMN 199
[Close]
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: EMC7_BOVIN (ER membrane protein complex subunit 7 OS=Bos taurus OX=9913 GN=EMC7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.729e-18
Identity = 52/164 (31.71%), Postives = 91/164 (55.49%), Query Frame = 1 
Query:  106 YTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLSEFVLEPLRDE-------QYYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRN 576
            + I GR  +P V  +++I     S  +V+++G + V FL+ DG F  H++P+G++++EV +  Y F PVRVD++++  GK++A    N    SE V  P   +        Y+  RE +     + +PM +M+   L++  L+PK++   DP +MRR  E+  N
Sbjct:   44 FKIEGRAVVPGVKPQDWI-----SAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVISPAYRFDPVRVDITSK--GKMRARYV-NYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQSMN 198
[Close]
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: EMC7_MOUSE (ER membrane protein complex subunit 7 OS=Mus musculus OX=10090 GN=Emc7 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.968e-18
Identity = 52/164 (31.71%), Postives = 91/164 (55.49%), Query Frame = 1 
Query:  106 YTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLSEFVLEPLRDE-------QYYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRN 576
            + I GR  +P V  +++I     S  +V+++G + V FL+ DG F  H++P+G++++EV +  Y F PVRVD++++  GK++A    N    SE V  P   +        Y+  RE +     + +PM +M+   L++  L+PK++   DP +MRR  E+  N
Sbjct:   44 FKIEGRAVVPGVKPQDWI-----SAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVISPAYKFDPVRVDITSK--GKMRARYV-NYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQSMN 198
[Close]
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: EMC7_DANRE (ER membrane protein complex subunit 7 OS=Danio rerio OX=7955 GN=emc7 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.088e-16
Identity = 61/207 (29.47%), Postives = 114/207 (55.07%), Query Frame = 1 
Query:   13 RSLILFLLIQLCFSVL-------PLSFAQSPATGSTEGYTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLSEFVLEP----LRD---EQYYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRNQGVPS 591
            R L +++ +Q  F++        P   A S + G  + + I GR  +P V T+++I     S  +V++ G + V FL+ DG F+ ++VP+G++++E+ +  + F PVRVD++++  GK++A L  N    SE + +P    +R      Y+  RE +     + +PM +M+   L+++ L+PK++   DP EMR+  E+  N   P+
Sbjct:    6 RLLDVYIALQALFALSWGFSDPEPGPVAASQSNG--DRFKIEGRAIVPGVKTQDWI-----STARVLVEGEEYVGFLKTDGSFAVNDVPSGSYVVEIVSPSFRFEPVRVDITSK--GKMRARLV-NYIKTSEVIRQPYPLQIRAGGPHTYFMKRETWGWTDFLMNPMVMMMVLPLLIIVLLPKVVNTNDP-EMRKEMEQSMNMLNPN 201
[Close]
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: Y5281_DICDI (ER membrane protein complex subunit 7 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0282229 PE=3 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 1.871e-10
Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = 1 
Query:  229 DGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQAALTENRRGLSEFVLEPLRDEQ--YYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRNQGVPSLASLLP 609
            DG FSF N+  G + +E+ ++ Y F   +VDV  ++  K++ A  EN   +    L+     +  +++   PFSI S+V++PM + V F   ++FL+PK+M  ++ +E  +   E      P+L   LP
Sbjct:   79 DGIFSFVNMSNGLYSLEIESMQYNFPHFKVDVLGKNKIKVRPA--ENETSILPLPLQIKATHRIPFFQQHVPFSIFSLVQNPMAISVLFTCALIFLLPKMMSFIEQDEETK---EALKASTPALVQQLP 202
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BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Match: YLC1_CAEEL (ER membrane protein complex subunit 7 homolog OS=Caenorhabditis elegans OX=6239 GN=C35D10.1 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.354e-8
Identity = 58/198 (29.29%), Postives = 102/198 (51.52%), Query Frame = 1 
Query:   19 LILFLLIQLCFSVLPLSFAQSPATGSTEGYTIYGRVKIPSVGTKEYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARHHGKIQA-ALTENRRGLSEFVLEPLR-----DEQYYEVREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRNQGVPSL 594
            L+LF LI L  +   +S  +  +T     +++ G + +PS         G     ++ LN GQ + F+R D  F    VP GT+++++    + F P+RVD++++  GK++A  LT  +      +  PLR       +Y+  RE + I  ++ SPM LM+   L+V+ ++PK+  N DPE     ++EM N  +P +
Sbjct:    5 LLLFSLIVLGSATEEVSRTEQTSTL----FSVEGEIALPSTRNCAKWSAG----ARIHLNHGQYMGFVRQDCTFRVDFVPTGTYIVQIENTDFVFEPIRVDITSK--GKMRARKLTILQPNNVNTLPYPLRLSARGPARYFRKREEWRITDMLFSPMVLMLVVPLVVMLILPKMTAN-DPE----LKKEMENMQMPKV 187
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan04g220800 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 9
Match NameE-valueIdentityDescription
Y4213_ARATH1.859e-8473.45ER membrane protein complex subunit 7 homolog OS=A... [more]
EMC7_XENTR1.290e-1931.79ER membrane protein complex subunit 7 OS=Xenopus t... [more]
EMC7_MACFA1.417e-1831.71ER membrane protein complex subunit 7 OS=Macaca fa... [more]
EMC7_HUMAN2.667e-1831.71ER membrane protein complex subunit 7 OS=Homo sapi... [more]
EMC7_BOVIN3.729e-1831.71ER membrane protein complex subunit 7 OS=Bos tauru... [more]
EMC7_MOUSE3.968e-1831.71ER membrane protein complex subunit 7 OS=Mus muscu... [more]
EMC7_DANRE8.088e-1629.47ER membrane protein complex subunit 7 OS=Danio rer... [more]
Y5281_DICDI1.871e-1030.23ER membrane protein complex subunit 7 homolog OS=D... [more]
YLC1_CAEEL1.354e-829.29ER membrane protein complex subunit 7 homolog OS=C... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019008Domain of unknown function DUF2012PFAMPF09430DUF2012coord: 58..160
e-value: 1.1E-21
score: 77.1
NoneNo IPR availableGENE3D2.60.40.1120coord: 49..122
e-value: 3.7E-5
score: 25.9
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 33..112

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220800; organism=Vigna angularis; type=mRNA; length=2635bp
ATGGCCTCCACCAGATCACTCattctttttctattaattcAATTATGCTT
CTCAGTTCTACCCCTCTCATTCGCCCAATCTCCTGCCACGGGGTATCAAT
TCCCTATTCCCTAAACCCTAATTTCACTTTGCTTTCTGCTTTCTATTAAC
CCTTATTTTAACGAATCTATCTCCAGGTCCACCGAAGGTTACACTATTTA
TGGTCGAGTGAAGATCCCCAGTACGTTCTTACTTTTACttcgtttttttt
attaattattatattttaaatcccGATTATTGTTTACTGGGGCagttctt
taaattttttatgaataaaaaagtgTTGAACTTCGATCTGTGAATGAAGC
TTGTGCTTGATGTGATGACTAAGGCTAAGTTAACAAGTTAACACACGATA
GGATCCTATAGGTTGTGCTGCGTCATAGAGATTAATTTTGAATAGTGGTT
GGGACTGTAGTGGTACTTGGTTGATCACTCAGTTCATCCTGTTCACATGA
ATTTACCTGCATTACATTGCTCAAAATTTACCTGGTTTAAAATTATTGCC
TGGTTATTTTATTCTTCCGTTTTCTCCAACTCTTTTTTGCTTGCACGtac
tgatttttaattttttttaatagaactTGTGCATTCACAGATAAATACAC
CTCTTTTTACTTGACAACAATATTGTCGTGTTAGGATGTGAAATTTCATG
TGCCATGACTATAAAACACCAAACCTTAATGAAGAATATGGATGGGTTTA
AAAGTTGTTGGTTGCTCTCATCAGTTACTTTGATGAACTACATCCGGACA
ATTGAAATAGGAAGATGGAATTCTGAACTGTTTACTGTGTGTTGTCATTG
AAAAAGTATGTCCCGTGGCGTTTAGATAAGCCAGATTTAGCCAGGATTTA
GGGAAGCTGATGGTTTAGTTACCAGGCGATTGATAATTGAAATGGGAAAA
TTTGATAGTTTATATCCTTGATGCATTCATTCTATTTGTTGCATATCTAT
CTTCTGACTGTATATAGGTTTGCTATAGCCTACAAGTTCTGTTGAATAGt
gatatttctaaatatttatgaCAGGTGTGGGAACAAAAGAATATATTCTT
CCAGGAAAAATTTCAAACGTCAAAGTCATACTCAATGGTGGTCAAAGAGT
TACTTTTCTGAGGCCAGATGGATATTTCTCATTGTATCCTTTTGATTTAC
AACTTAATTTCCACTTCTGCTTAATTTGCATGATGGATGTTTTTGGGATA
TTAAACCCTATTAAATTCTATCTCTCCTTATCTTCTTGTTCTTGATTTTA
TGAAGTTATTGTAGTTAATGCTGGCAAATCATGTTAAGAGATGATCTAAT
TCCTTAATGTGTATGCTTTAAGCCACAATGTTCCTGCAGGGACACATCTA
ATTGAAGTAGCTGCAATAGGTTATTTCTTTTCTCCGGTGAATACTCAACC
TGAAAATTACATCTCAATTCTTTTccccaaatatatatattttttttcaa
tgtatgctcatttctcaaatttttatgtttattaaaaaaggTACGAGTTG
ATGTAAGTGCTAGACACCATGGCAAAATTCAGGCGGCACTGACAGAGAAT
AGGAGGGGACTTAGTGAGTTTGTCTTAGAGCCATTAAGGGATGAACAATA
TTACGAGGTTGGTTTTGACTGCAAATTCCCTGTTTGTGTTTGCCTGTTCC
CCTTCCCATTCCTTCAATTTATGACCTAAATGTCTGCATGTTGTTATCTT
GTCTTGCTACAGGTTAGGGAGCCATTCTCTATTATGTCCGTTGTGAAAAG
TCCAATGGGTCTGATGGTTGGATTTATGCTAATTGTTGTCTTCCTCATGC
CCAAATTGATGGAGAACATGGGTATGTTTTTAATAACTTATCTGCTAACT
TTTTTGAATTTGAGTCTCTTTTTTGCATATATGGATGTACTTGCTTTGTA
TGGGTGAAATGTTTTATTTCCTTCTGGAGAAGTTTGGGACTAATCCTATC
TCATACCCGATATCATTGTTGCTTGGCAacgtcaaaatataaaaatcaag
ttGAAATATCTGAAGTTccttctatctttttatctatCTCCCTGTCTTCg
ttcttgaagaaaatttttCTCCCCTAATTTTCTTGTATTACTGAGTCATA
ACTGAATACTTTGCAACCTTCCACCGCCATGCTATTTTATGTGATCATTG
TGTACATATTAAAAGGTTTCAGCTATGAGTTATGCTTCTCTCTTTTTGGG
CTTCTACTAATTTGTTCTTGCATGATTATCAAACTTGATGAGTTTCTCAg
gaaaaaacttgttaactAATCATTAACTCCATTTTGGTCAAAACCCAGAT
GAAGTGGGGGAAATCTCGAAAATCTTGTTCAGCTTTACTTTTTGATGTTG
TGAATTGCTTTACTTGTTTCACAGGCAATGTGCCGAATGGTAGTTTTTTC
TTGTTAGTTATATGAACCTAAAAAGTAGGATATTGTGCTACTTTTTGCAT
AAATTATGCTGATGGCCTCATTGTATTTCTGTGGAAACAGATCCAGAAGA
AATGAGGCGTGCACAAGAAGAAATGAGAAATCAAGGAGTTCCATCGTTAG
CAAGCTTGTTACCTGGTGCCGCAAGAAGCAACTAG
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protein sequence of LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1

>LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=209bp
MASTRSLILFLLIQLCFSVLPLSFAQSPATGSTEGYTIYGRVKIPSVGTK
EYILPGKISNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAAIGYF
FSPVRVDVSARHHGKIQAALTENRRGLSEFVLEPLRDEQYYEVREPFSIM
SVVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRNQGVPSLAS
LLPGAARSN
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mRNA from alignment at Chr_4-CM003374.1:31289111..31291745+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220800; organism=Vigna angularis; type=mRNA; length=2635bp; location=Sequence derived from: Chr_4-CM003374.1:31289111..31291745+ (Vigna angularis
ATGGCCTCCACCAGATCACTCattctttttctattaattcAATTATGCTT
CTCAGTTCTACCCCTCTCATTCGCCCAATCTCCTGCCACGGGGTATCAAT
TCCCTATTCCCTAAACCCTAATTTCACTTTGCTTTCTGCTTTCTATTAAC
CCTTATTTTAACGAATCTATCTCCAGGTCCACCGAAGGTTACACTATTTA
TGGTCGAGTGAAGATCCCCAGTACGTTCTTACTTTTACttcgtttttttt
attaattattatattttaaatcccGATTATTGTTTACTGGGGCagttctt
taaattttttatgaataaaaaagtgTTGAACTTCGATCTGTGAATGAAGC
TTGTGCTTGATGTGATGACTAAGGCTAAGTTAACAAGTTAACACACGATA
GGATCCTATAGGTTGTGCTGCGTCATAGAGATTAATTTTGAATAGTGGTT
GGGACTGTAGTGGTACTTGGTTGATCACTCAGTTCATCCTGTTCACATGA
ATTTACCTGCATTACATTGCTCAAAATTTACCTGGTTTAAAATTATTGCC
TGGTTATTTTATTCTTCCGTTTTCTCCAACTCTTTTTTGCTTGCACGtac
tgatttttaattttttttaatagaactTGTGCATTCACAGATAAATACAC
CTCTTTTTACTTGACAACAATATTGTCGTGTTAGGATGTGAAATTTCATG
TGCCATGACTATAAAACACCAAACCTTAATGAAGAATATGGATGGGTTTA
AAAGTTGTTGGTTGCTCTCATCAGTTACTTTGATGAACTACATCCGGACA
ATTGAAATAGGAAGATGGAATTCTGAACTGTTTACTGTGTGTTGTCATTG
AAAAAGTATGTCCCGTGGCGTTTAGATAAGCCAGATTTAGCCAGGATTTA
GGGAAGCTGATGGTTTAGTTACCAGGCGATTGATAATTGAAATGGGAAAA
TTTGATAGTTTATATCCTTGATGCATTCATTCTATTTGTTGCATATCTAT
CTTCTGACTGTATATAGGTTTGCTATAGCCTACAAGTTCTGTTGAATAGt
gatatttctaaatatttatgaCAGGTGTGGGAACAAAAGAATATATTCTT
CCAGGAAAAATTTCAAACGTCAAAGTCATACTCAATGGTGGTCAAAGAGT
TACTTTTCTGAGGCCAGATGGATATTTCTCATTGTATCCTTTTGATTTAC
AACTTAATTTCCACTTCTGCTTAATTTGCATGATGGATGTTTTTGGGATA
TTAAACCCTATTAAATTCTATCTCTCCTTATCTTCTTGTTCTTGATTTTA
TGAAGTTATTGTAGTTAATGCTGGCAAATCATGTTAAGAGATGATCTAAT
TCCTTAATGTGTATGCTTTAAGCCACAATGTTCCTGCAGGGACACATCTA
ATTGAAGTAGCTGCAATAGGTTATTTCTTTTCTCCGGTGAATACTCAACC
TGAAAATTACATCTCAATTCTTTTccccaaatatatatattttttttcaa
tgtatgctcatttctcaaatttttatgtttattaaaaaaggTACGAGTTG
ATGTAAGTGCTAGACACCATGGCAAAATTCAGGCGGCACTGACAGAGAAT
AGGAGGGGACTTAGTGAGTTTGTCTTAGAGCCATTAAGGGATGAACAATA
TTACGAGGTTGGTTTTGACTGCAAATTCCCTGTTTGTGTTTGCCTGTTCC
CCTTCCCATTCCTTCAATTTATGACCTAAATGTCTGCATGTTGTTATCTT
GTCTTGCTACAGGTTAGGGAGCCATTCTCTATTATGTCCGTTGTGAAAAG
TCCAATGGGTCTGATGGTTGGATTTATGCTAATTGTTGTCTTCCTCATGC
CCAAATTGATGGAGAACATGGGTATGTTTTTAATAACTTATCTGCTAACT
TTTTTGAATTTGAGTCTCTTTTTTGCATATATGGATGTACTTGCTTTGTA
TGGGTGAAATGTTTTATTTCCTTCTGGAGAAGTTTGGGACTAATCCTATC
TCATACCCGATATCATTGTTGCTTGGCAacgtcaaaatataaaaatcaag
ttGAAATATCTGAAGTTccttctatctttttatctatCTCCCTGTCTTCg
ttcttgaagaaaatttttCTCCCCTAATTTTCTTGTATTACTGAGTCATA
ACTGAATACTTTGCAACCTTCCACCGCCATGCTATTTTATGTGATCATTG
TGTACATATTAAAAGGTTTCAGCTATGAGTTATGCTTCTCTCTTTTTGGG
CTTCTACTAATTTGTTCTTGCATGATTATCAAACTTGATGAGTTTCTCAg
gaaaaaacttgttaactAATCATTAACTCCATTTTGGTCAAAACCCAGAT
GAAGTGGGGGAAATCTCGAAAATCTTGTTCAGCTTTACTTTTTGATGTTG
TGAATTGCTTTACTTGTTTCACAGGCAATGTGCCGAATGGTAGTTTTTTC
TTGTTAGTTATATGAACCTAAAAAGTAGGATATTGTGCTACTTTTTGCAT
AAATTATGCTGATGGCCTCATTGTATTTCTGTGGAAACAGATCCAGAAGA
AATGAGGCGTGCACAAGAAGAAATGAGAAATCAAGGAGTTCCATCGTTAG
CAAGCTTGTTACCTGGTGCCGCAAGAAGCAACTAG
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Coding sequence (CDS) from alignment at Chr_4-CM003374.1:31289111..31291745+

>LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g220800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g220800; organism=Vigna angularis; type=CDS; length=630bp; location=Sequence derived from: Chr_4-CM003374.1:31289111..31291745+ (Vigna angularis
ATGGCCTCCACCAGATCACTCattctttttctattaattcAATTATGCTT
CTCAGTTCTACCCCTCTCATTCGCCCAATCTCCTGCCACGGGGTCCACCG
AAGGTTACACTATTTATGGTCGAGTGAAGATCCCCAGTGTGGGAACAAAA
GAATATATTCTTCCAGGAAAAATTTCAAACGTCAAAGTCATACTCAATGG
TGGTCAAAGAGTTACTTTTCTGAGGCCAGATGGATATTTCTCATTCCACA
ATGTTCCTGCAGGGACACATCTAATTGAAGTAGCTGCAATAGGTTATTTC
TTTTCTCCGgTACGAGTTGATGTAAGTGCTAGACACCATGGCAAAATTCA
GGCGGCACTGACAGAGAATAGGAGGGGACTTAGTGAGTTTGTCTTAGAGC
CATTAAGGGATGAACAATATTACGAGGTTAGGGAGCCATTCTCTATTATG
TCCGTTGTGAAAAGTCCAATGGGTCTGATGGTTGGATTTATGCTAATTGT
TGTCTTCCTCATGCCCAAATTGATGGAGAACATGGATCCAGAAGAAATGA
GGCGTGCACAAGAAGAAATGAGAAATCAAGGAGTTCCATCGTTAGCAAGC
TTGTTACCTGGTGCCGCAAGAAGCAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019008EMC7_beta_sandwich
IPR013784Carb-bd-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding