LR48_mrnaVigan04g239000

Transcript Overview
NameLR48_mrnaVigan04g239000
Unique NameLR48_mrnaVigan04g239000_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1233
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_4-CM003374.1supercontigChr_4-CM003374.1:33102727..33103959 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR547Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR553Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR592Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR605Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL047Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR210Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR211Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0112Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0368Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0422Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0611Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0840Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0851Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1093Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR643Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR645Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR653Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0791Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0864Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0898Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR614Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR626Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR680Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR689Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR526Pisum sativum Cameor genome v1aPisum sativum
aspsR537Pisum sativum Cameor genome v1aPisum sativum
aspsR543Pisum sativum Cameor genome v1aPisum sativum
aspsR554Pisum sativum Cameor genome v1aPisum sativum
aspsR579Pisum sativum Cameor genome v1aPisum sativum
aspvR592Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR603Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR615Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR644Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR499Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR517Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR533Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR538Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR550Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR576Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR591Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR611Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR564Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR590Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR605Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR625Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR472Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR487Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR505Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR531Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR609Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR654Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR680Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR687Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR468Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR476Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR488Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR512Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR492Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR500Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR539Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR549Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_023012Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_09464.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_09203Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat2g172560.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_30645Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_01076Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014645194.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_27842Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_09368Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014664894.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_21711.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
jg35462.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.4g131640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr09.1463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.001G032100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_02249Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg18089.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-KK1_024964Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_004508990.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_12012Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.4g101560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_004498879.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
evm.model.Chr02.1495Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.3g177960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun09g228000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.003G232300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr08.405Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
evm.model.Chr03.2464Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_022784502.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_00966Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014648609.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun08g034400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_009582Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.3g218240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.009G075000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.002G008800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun02g153800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_19748.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004511746.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg3650.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.1g375000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.1g305120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun03g290200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_05268.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan06g023300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
LR48_mrnaVigan01g200500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan04g239000gene-LR48_Vigan04g239000_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g239000LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33102727..33102729LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33102727..33102729Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33102727..33102862LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33102727..33102862Vigna angularisexon
LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33102962..33103091LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33102962..33103091Vigna angularisexon
LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33103203..33103959LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33103203..33103959Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33102863..33102961LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33102863..33102961Vigna angularisintron
LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33103092..33103202LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33103092..33103202Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS2320CDS2320_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33103957..33103959LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:33103957..33103959Vigna angularisstop_codon


Homology
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.709e-75
Identity = 134/201 (66.67%), Postives = 155/201 (77.11%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTXXXXXXXXXXXXXXX---------ARSKENGVVKQENNSSLLLQENIVQQQPCWP------QIPAPPLSPYTSQNPSFNDQDSIRKLLIK 558
            MGRAPCCDKANVKKGPWSPEEDAKLKSYIE  GTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEE+NIICSLY++IGSRWS+IAAQLPGRTDNDIKNYWNTRLKKKL+ KQRKELQ             +    +Q+  +S +++++  Q    WP      Q+PA     + +Q  SF DQ+ ++ +LIK
Sbjct:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINKQRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQD--QTMFTWPLHHHNVQVPA----LFMNQTNSFCDQEDVKPVLIK 195
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 6.403e-73
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGRAPCCDKANVKKGPWSPEED KLK YI+++GTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEED II SLY+SIGSRWS+IAAQLPGRTDNDIKNYWNT
Sbjct:    1 MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNT 111
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: MYB87_ARATH (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.218e-68
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGRAPCCDK  VKKGPWS EEDA LKSYIE+HGTG NWI+LPQ+IG+KRCGKSCRLRWLNYLRPN+KHGGF++EED IICSLY++IGSRWS+IA+QLPGRTDNDIKNYWNT
Sbjct:    1 MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLNYLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNT 111
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.468e-67
Identity = 96/111 (86.49%), Postives = 102/111 (91.89%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGRAPCCDKANVK+GPWSPEEDAKLK YIE+ GTGGNWIALP K GL+RCGKSCRLRWLNYLRPNI+HG F+EEEDNII SL+ SIGSRWSVIAA L GRTDNDIKNYWNT
Sbjct:    1 MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNT 111
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.439e-63
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGRAPCCDK  VK+GPWSPEED+KL+ YIE++G GGNWI+ P K GL+RCGKSCRLRWLNYLRPNIKHG FSEEED II SL+ +IGSRWS+IAA LPGRTDNDIKNYWNT
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNT 111
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.307e-50
Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGR PCC+K NVK+G W+PEED KL SYI QHGT  NW  +P+  GL+RCGKSCRLRW NYLRP++KHG FSE E++II   +  +G+RWS+IAAQLPGRTDND+KNYWNT
Sbjct:    1 MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTR-NWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNT 110
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: MY106_ARATH (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.377e-48
Identity = 73/111 (65.77%), Postives = 90/111 (81.08%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGR+PCCDKA +KKGPW+PEED KL +YIE+HG G +W +LP+K GL+RCGKSCRLRW NYLRP+IK G F+ +E+  I  L+  +G+RWS IA  LP RTDN+IKNYWNT
Sbjct:    1 MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEEHGHG-SWRSLPEKAGLQRCGKSCRLRWTNYLRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNT 110
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: MYB4_ORYSJ (Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 4.760e-48
Identity = 72/111 (64.86%), Postives = 92/111 (82.88%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGRAPCC+K  +KKGPW+PEED  L ++I++HG G NW ALP++ GL RCGKSCRLRW+NYLRP+IK G FS+EE++ I  L+  +G+RWS IAA+LPGRTDN+IKN W+T
Sbjct:    1 MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHG-NWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHT 110
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.715e-48
Identity = 72/111 (64.86%), Postives = 88/111 (79.28%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGR+PCCDK  +KKGPW+PEED KL +YIE+HG G +W +LP+K GL RCGKSCRLRW NYLRP+IK G F+ +E+  I  L+  +G+RWS IA  LP RTDN+IKNYWNT
Sbjct:    1 MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHG-SWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNT 110
[Close]
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Match: MYB80_ORYSJ (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 1.986e-47
Identity = 73/111 (65.77%), Postives = 90/111 (81.08%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 333
            MGR PCC+K NVK+G W+PEED KL SYI Q+GT  NW  +P+  GL+RCGKSCRLRW NYLRP++KHG F++ E+  I  L+  +G+RWSVIAAQLPGRTDND+KN+WNT
Sbjct:    1 MGRVPCCEKDNVKRGQWTPEEDNKLLSYITQYGTR-NWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNT 110
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan04g239000 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
RAX3_ARATH1.709e-7566.67Transcription factor RAX3 OS=Arabidopsis thaliana ... [more]
MYB36_ARATH6.403e-7391.89Transcription factor MYB36 OS=Arabidopsis thaliana... [more]
MYB87_ARATH1.218e-6884.68Transcription factor MYB87 OS=Arabidopsis thaliana... [more]
RAX2_ARATH1.468e-6786.49Transcription factor RAX2 OS=Arabidopsis thaliana ... [more]
RAX1_ARATH2.439e-6380.18Transcription factor RAX1 OS=Arabidopsis thaliana ... [more]
MYB80_ARATH1.307e-5068.47Transcription factor MYB80 OS=Arabidopsis thaliana... [more]
MY106_ARATH1.377e-4865.77Transcription factor MYB106 OS=Arabidopsis thalian... [more]
MYB4_ORYSJ4.760e-4864.86Transcription factor MYB4 OS=Oryza sativa subsp. j... [more]
MYB16_ARATH6.715e-4864.86Transcription factor MYB16 OS=Arabidopsis thaliana... [more]
MYB80_ORYSJ1.986e-4765.77Transcription factor MYB80 OS=Oryza sativa subsp. ... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..64
e-value: 5.4E-13
score: 59.2
coord: 67..115
e-value: 4.7E-11
score: 52.7
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 69..111
e-value: 6.0E-10
score: 39.1
coord: 14..62
e-value: 2.3E-14
score: 53.2
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 16..62
e-value: 2.18911E-10
score: 53.3482
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 71..113
e-value: 1.29189E-8
score: 48.3406
NoneNo IPR availableGENE3D1.10.10.60coord: 7..68
e-value: 3.0E-20
score: 73.7
NoneNo IPR availableGENE3D1.10.10.60coord: 70..143
e-value: 6.4E-19
score: 69.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 63..117
score: 20.999
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 9..62
score: 14.467
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..109

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g239000; organism=Vigna angularis; type=mRNA; length=1233bp
ATGGGAAGAGCACCTTGCTGTGACAAAGCAAACGTGAAGAAAGGTCCTTG
GTCGCCAGAAGAAGATGCCAAACTCAAATCCTACATCGAACAGCACGGAA
CCGGAGGCAACTGGATCGCTTTGCCACAGAAGATTGGTATCATACACATA
CTATATACTCATATATATAACCCTAGCTACACTTTTCCAtcaacttctct
ttctttcttattatttctcttcatttctgAGTCAGGCCTCAAACGATGTG
GCAAGAGTTGCCGTCTCAGGTGGCTAAACTACCTCCGCCCTAACATCAAG
CACGGTGGCTTCtctgaagaagaagataacATCATTTGCAGCCTCTACGT
TAGCATTGGAAGCAGGTAACTACTATTGTTTCCGAAAGAGGATACaatct
tatttttcttaaataaacaTGGGAGTTTCATTTTCCGTTGAATGATTAAT
GAATCGTTTTGTGTGATGTAACGCAGGTGGTCGGTGATTGCGGCACAATT
GCCAGGAAGAACTGATAACGACATAAAGAACTACTGGAACACGAGGCTGA
AGAAGAAGCTTTTAGGGAAGCAGCGCAAGGAACTGCAGGCACGTAGCAAA
GAAAACGGTGTCGTTAAGCAGGAGAACAATTCTTCACTCTTGCTTCAGGA
AAACATTGTTCAACAACAGCCTTGTTGGCCACAGATTCCGGCGCCGCCAC
TTTCGCCGTACACAAGTCAAAATCCAAGTTTCAACGACCAAGACTCTATT
AGAAAACTTCTAATCAAGCTTGGAGGGAGATTCTCCGATGATTATCAACC
CATAGGGGTGAATGTTCAGTTTCCACAGGGTTCTCTCACATCAACACAAC
AAATTCAAGAGGAGCAAGTCCATGTTAGCTCTTCTGGGTGCATGAACTCT
ATTGGCAACAGCCAAGTACAATTTGGTCAGAGTAATGAGTACTGTTCTGA
GTTGGTGCAAGGAGAAGTGAGTTTCAGTTCCGCAGCTATTGGGGAAATGG
TTTCTACTAATGATTATTCTCAAAGGTTATTAGGAGGGTTGGAGTTCTTG
TATGGAGAGGAAATGATTAGCGATAAGATAATGGGTGGTTGTGCATCTTC
ATGTTGTGGGCAAAGTACTAATTGGGACGAGACAAGTTCTTTGATTTATC
CTCCTCTTGTTGCTTCGAGTTTCGAGGGTGTGAGGGAAGAGATGCCACGA
GAAAATGCTTTTCAAGAGTTGAGCTACCCATAG
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protein sequence of LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1

>LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=340bp
MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRC
GKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGR
TDNDIKNYWNTRLKKKLLGKQRKELQARSKENGVVKQENNSSLLLQENIV
QQQPCWPQIPAPPLSPYTSQNPSFNDQDSIRKLLIKLGGRFSDDYQPIGV
NVQFPQGSLTSTQQIQEEQVHVSSSGCMNSIGNSQVQFGQSNEYCSELVQ
GEVSFSSAAIGEMVSTNDYSQRLLGGLEFLYGEEMISDKIMGGCASSCCG
QSTNWDETSSLIYPPLVASSFEGVREEMPRENAFQELSYP
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mRNA from alignment at Chr_4-CM003374.1:33102727..33103959+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g239000; organism=Vigna angularis; type=mRNA; length=1233bp; location=Sequence derived from: Chr_4-CM003374.1:33102727..33103959+ (Vigna angularis
ATGGGAAGAGCACCTTGCTGTGACAAAGCAAACGTGAAGAAAGGTCCTTG
GTCGCCAGAAGAAGATGCCAAACTCAAATCCTACATCGAACAGCACGGAA
CCGGAGGCAACTGGATCGCTTTGCCACAGAAGATTGGTATCATACACATA
CTATATACTCATATATATAACCCTAGCTACACTTTTCCAtcaacttctct
ttctttcttattatttctcttcatttctgAGTCAGGCCTCAAACGATGTG
GCAAGAGTTGCCGTCTCAGGTGGCTAAACTACCTCCGCCCTAACATCAAG
CACGGTGGCTTCtctgaagaagaagataacATCATTTGCAGCCTCTACGT
TAGCATTGGAAGCAGGTAACTACTATTGTTTCCGAAAGAGGATACaatct
tatttttcttaaataaacaTGGGAGTTTCATTTTCCGTTGAATGATTAAT
GAATCGTTTTGTGTGATGTAACGCAGGTGGTCGGTGATTGCGGCACAATT
GCCAGGAAGAACTGATAACGACATAAAGAACTACTGGAACACGAGGCTGA
AGAAGAAGCTTTTAGGGAAGCAGCGCAAGGAACTGCAGGCACGTAGCAAA
GAAAACGGTGTCGTTAAGCAGGAGAACAATTCTTCACTCTTGCTTCAGGA
AAACATTGTTCAACAACAGCCTTGTTGGCCACAGATTCCGGCGCCGCCAC
TTTCGCCGTACACAAGTCAAAATCCAAGTTTCAACGACCAAGACTCTATT
AGAAAACTTCTAATCAAGCTTGGAGGGAGATTCTCCGATGATTATCAACC
CATAGGGGTGAATGTTCAGTTTCCACAGGGTTCTCTCACATCAACACAAC
AAATTCAAGAGGAGCAAGTCCATGTTAGCTCTTCTGGGTGCATGAACTCT
ATTGGCAACAGCCAAGTACAATTTGGTCAGAGTAATGAGTACTGTTCTGA
GTTGGTGCAAGGAGAAGTGAGTTTCAGTTCCGCAGCTATTGGGGAAATGG
TTTCTACTAATGATTATTCTCAAAGGTTATTAGGAGGGTTGGAGTTCTTG
TATGGAGAGGAAATGATTAGCGATAAGATAATGGGTGGTTGTGCATCTTC
ATGTTGTGGGCAAAGTACTAATTGGGACGAGACAAGTTCTTTGATTTATC
CTCCTCTTGTTGCTTCGAGTTTCGAGGGTGTGAGGGAAGAGATGCCACGA
GAAAATGCTTTTCAAGAGTTGAGCTACCCATAG
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Coding sequence (CDS) from alignment at Chr_4-CM003374.1:33102727..33103959+

>LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g239000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g239000; organism=Vigna angularis; type=CDS; length=1023bp; location=Sequence derived from: Chr_4-CM003374.1:33102727..33103959+ (Vigna angularis
ATGGGAAGAGCACCTTGCTGTGACAAAGCAAACGTGAAGAAAGGTCCTTG
GTCGCCAGAAGAAGATGCCAAACTCAAATCCTACATCGAACAGCACGGAA
CCGGAGGCAACTGGATCGCTTTGCCACAGAAGATTGGCCTCAAACGATGT
GGCAAGAGTTGCCGTCTCAGGTGGCTAAACTACCTCCGCCCTAACATCAA
GCACGGTGGCTTCtctgaagaagaagataacATCATTTGCAGCCTCTACG
TTAGCATTGGAAGCAGGTGGTCGGTGATTGCGGCACAATTGCCAGGAAGA
ACTGATAACGACATAAAGAACTACTGGAACACGAGGCTGAAGAAGAAGCT
TTTAGGGAAGCAGCGCAAGGAACTGCAGGCACGTAGCAAAGAAAACGGTG
TCGTTAAGCAGGAGAACAATTCTTCACTCTTGCTTCAGGAAAACATTGTT
CAACAACAGCCTTGTTGGCCACAGATTCCGGCGCCGCCACTTTCGCCGTA
CACAAGTCAAAATCCAAGTTTCAACGACCAAGACTCTATTAGAAAACTTC
TAATCAAGCTTGGAGGGAGATTCTCCGATGATTATCAACCCATAGGGGTG
AATGTTCAGTTTCCACAGGGTTCTCTCACATCAACACAACAAATTCAAGA
GGAGCAAGTCCATGTTAGCTCTTCTGGGTGCATGAACTCTATTGGCAACA
GCCAAGTACAATTTGGTCAGAGTAATGAGTACTGTTCTGAGTTGGTGCAA
GGAGAAGTGAGTTTCAGTTCCGCAGCTATTGGGGAAATGGTTTCTACTAA
TGATTATTCTCAAAGGTTATTAGGAGGGTTGGAGTTCTTGTATGGAGAGG
AAATGATTAGCGATAAGATAATGGGTGGTTGTGCATCTTCATGTTGTGGG
CAAAGTACTAATTGGGACGAGACAAGTTCTTTGATTTATCCTCCTCTTGT
TGCTTCGAGTTTCGAGGGTGTGAGGGAAGAGATGCCACGAGAAAATGCTT
TTCAAGAGTTGAGCTACCCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding