LR48_mrnaVigan08g170600
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Homology
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana OX=3702 GN=PLT5 PE=1 SV=2) HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0 Identity = 360/505 (71.29%), Postives = 428/505 (84.75%), Query Frame = 1 Query: 52 PSKKPKSNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVTEKNT-GEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSKLMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYTVLPETRGKTLEDMEGSFGTFRAKSXXXXXXXXXXXXSKVPQLQMGTNLQ 1563 P+K PK N YAF CAILASMTSILLGYDIGVMSGA IYIKRDLK++D+QI IL G +N+YSLIGSC AGRTSDWIGRRYTIV AG IFF GAILMG SPNYAFLMFGRF+AGIG+GYALMIAPVYTAEVSPAS+RGFL SFPEVFIN GI+LGY+SN AFS L LK+GWR+MLG+G PS++L +GVLAMPESPRWLVM+GRLG+A +VL+KTSDS EA LRL +IK AAGIP C+DDVVQV+ +N+ GEGVW+EL + PTPA+R ++IAA+GIHFFQQASG+DAVVL+SPRIF+ AG+ D Q+LLATVAVG VKT FILVATF+LDR+GRRPLLL+SVGGMVLSL L SLTIIDQS K+MWA+ ++I V+TYVATFSIG+GPITWVYSSEIFPLRLR+QG++ GVVVNR TSGVIS++FL ++KA+T GGAF+L+ GIA V W+FFYT LPET+G+ LEDM+ F FR + + + G P++++G+N Q Sbjct: 26 PAKPPKRNNYAFACAILASMTSILLGYDIGVMSGAMIYIKRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSNLPLKVGWRLMLGIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVLDKTSDSPTEATLRLEDIKHAAGIPADCHDDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYTFLPETQGRMLEDMDELFSGFRWRDSKSKPKGNPEKTVPNPEVEIGSNKQ 530
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=3 SV=1) HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0 Identity = 329/493 (66.73%), Postives = 406/493 (82.35%), Query Frame = 1 Query: 13 KGVEARKIVGDFNPSKKPKSNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQV-TEKNTGEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSK-LMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYTVLPETRGKTLEDMEGSFGTFRAK 1485 GVE ++ + P + +S +YAF CAILASMTSI+LGYDIGVMSGA+I+IK DLK+SDVQ+EILMGI+N+YSL+GS AGRTSDW+GRRYTIV AG FF GA+LMGF+ NY F+M GRFVAGIG+GYA+MIAPVYTAEV+PAS+RGFLTSFPE+FIN GILLGY+SNY FSKL LGWR MLGVG PS+ L +GVLAMPESPRWLV++GRLG+A KVL+KTS++KEEA RL +IK+A GIP+ DDV+ V +K+ G+GVWK+L + PTP++RHI+IA LGIHF QQASG+DAVVLYSP IF KAG+ +LLATVAVG VKTLFI+V T ++DR GRR LLL+S+GGM LSL L SLT+I+++ + L WAIGL++T V+T+VATFSIG+GP+TWVY SEIFP+RLRAQGA+ GV++NR SG+I MTFLSL+K +TIGGAF L+ G+AA W+FF+T LPETRG LE+ME FG++ A Sbjct: 4 SGVEQGVVIAESEPPRGNRS-RYAFACAILASMTSIILGYDIGVMSGASIFIKDDLKLSDVQLEILMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPSVFLAIGVLAMPESPRWLVLQGRLGDAFKVLDKTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFTFLPETRGIPLEEMETLFGSYTAN 495
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=3 SV=1) HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0 Identity = 323/493 (65.52%), Postives = 403/493 (81.74%), Query Frame = 1 Query: 13 KGVEARKIVGDFNPSKKPKSNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQV-TEKNTGEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSK-LMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYTVLPETRGKTLEDMEGSFGTFRAK 1485 G E +V + P + +S ++AF CAILASMTSI+LGYDIGVMSGAAI+IK DLK+SDVQ+EILMGI+N+YSLIGS AGRTSDWIGRRYTIV AG FF GA+LMGF+ NY F+M GRFVAGIG+GYA+MIAPVYT EV+PAS+RGFL+SFPE+FIN GILLGY+SNY F+KL +GWR MLG+G PS+ L +GVLAMPESPRWLVM+GRLG+A KVL+KTS++KEEA RL +IK+A GIP+ DDV+ V +K+ G+GVWK+L + PTP++RHI+IA LGIHF QQASG+DAVVLYSP IF +AG+ +LLATVAVG VKTLFI+V T ++DR GRR LLL+S+GGM SL L SLT+ID++ + L WAIGL++T V+T+VATFS+G+GP+TWVY+SEIFP+RLRAQGA+ GV++NR SG+I MTFLSL+K +TIGGAF L+ G+A W+FF+T LPETRG LE++E FG++ A Sbjct: 4 SGEERGVVVAESEPPRGNRS-RFAFACAILASMTSIILGYDIGVMSGAAIFIKDDLKLSDVQLEILMGILNIYSLIGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPASSRGFLSSFPEIFINIGILLGYVSNYFFAKLPEHIGWRFMLGIGAVPSVFLAIGVLAMPESPRWLVMQGRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAVAAWVFFFTFLPETRGVPLEEIESLFGSYSAN 495
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana OX=3702 GN=PLT6 PE=2 SV=2) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 280/472 (59.32%), Postives = 360/472 (76.27%), Query Frame = 1 Query: 58 KKPKS-NKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVTEKNT-GEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSKLMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYTVLPETRGKTLEDMEGSF 1467 +KP N++A CAI+AS+ SI+ GYD GVMSGA ++I+ DLK +DVQIE+L GI+NL +L+GS LAGRTSD IGRRYTIV A +F +G+ILMG+ PNY L+ GR AG+G+G+ALM+APVY+AE++ AS RG L S P + I+ GILLGYI NY FSKL + +GWR+MLG+ PS++L G+L MPESPRWL+M+GRL E ++L S+S EEA+LR +IK AAGI C DDVV++ K T GEGVWKEL L PTPA+R +++ ALGIHFFQ ASG++AV+LY PRIF+KAGIT + L T+ VG +KT FI AT +LD+VGRR LLL+SVGGMV++L L LT+ + KL WA+ LSI ++VA FSIG GPITWVYSSE+FPL+LRAQGA+ GV VNR + +SM+FLSLT AIT GGAFF++ G+AAV W FF+ +LPET+GK+LE++E F Sbjct: 8 EKPAGVNRFALQCAIVASIVSIIFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLASLPHLCISIGILLGYIVNYFFSKLPMHIGWRLMLGIAAVPSLVLAFGILKMPESPRWLIMQGRLKEGKEILELVSNSPEEAELRFQDIKAAAGIDPKCVDDVVKMEGKKTHGEGVWKELILRPTPAVRRVLLTALGIHFFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFFFLLPETKGKSLEEIEALF 479
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana OX=3702 GN=PLT3 PE=3 SV=1) HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0 Identity = 281/476 (59.03%), Postives = 361/476 (75.84%), Query Frame = 1 Query: 61 KPKSNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVTE-------KNTGEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSKLMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYTVLPETRGKTLEDMEGSF 1467 P NK+AFGCAI+AS+ SI+ GYD GVMSGA I+I+ DLK++D QIE+L GI+NL +L+GS AG+TSD IGRRYTI + IF VG++LMG+ PNY LM GR +AG+G+G+ALMIAPVY+AE+S AS RGFLTS PE+ I+ GILLGY+SNY F KL+LKLGWR+MLG+ FPS++L G+ MPESPRWLVM+GRL EA K++ S+++EEA+ R +I AA + DV ++ E KN G+ VW+EL + P PA+R I+IAA+GIHFF+ A+G++AVVLYSPRIF+KAG+ + LLATV VG K FI++ATF+LD+VGRR LLL+S GGMV +L +LA+SLT++ Q +L WA+ LSI +VA FSIG GPITWVYSSEIFPLRLRAQGA+ GV VNR + +SM+FLS+TKAIT GG FF++ GIA W FF+ +LPET+G LE+ME F Sbjct: 15 NPHMNKFAFGCAIVASIISIIFGYDTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSASHRGFLTSLPELCISLGILLGYVSNYCFGKLTLKLGWRLMLGIAAFPSLILAFGITRMPESPRWLVMQGRLEEAKKIMVLVSNTEEEAEERFRDILTAAEV------DVTEIKEVGGGVKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMV-QRFGRLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFAGIAVAAWWFFFFMLPETKGLPLEEMEKLF 483
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana OX=3702 GN=PLT4 PE=2 SV=1) HSP 1 Score: 453.751 bits (1166), Expect = 2.922e-154 Identity = 236/468 (50.43%), Postives = 326/468 (69.66%), Query Frame = 1 Query: 55 SKKPKSNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVTEKNTGEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSKLMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYTVLPETRGKTLEDME 1458 ++ ++ KY CA AS+ ++LLGYD+GVMSGA ++I++DLK+++VQ E+L+G +++ SL GS GRTSD IGR++T+ A +F GA +M +P++ LM GR +AGIGIG +MIAPVY AE+SP RGF TSFPE+FIN GILLGY+SNYAFS LS+ + WR+ML VG+ PS+ + + +PESPRWLVM+GR+ A +VL KT++ +EA+ RLAEI+ AA E D VW+EL L P+P +R ++I GI FQQ +G+DA V YSP I ++AGI D+T+ L ATVAVG KT+FIL ATF++D VGR+PLL S GM L L L+ +LT + Q I L++ V VA FSIG GP+ WV +SEIFPLRLRAQ +A G V NR SG+++M+FLS+++AIT+GG FF++ ++A+ +F Y ++PET GK+LE +E Sbjct: 46 ARNSRTRKYVMACAFFASLNNVLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRIMLAVGILPSVFIGFALCVIPESPRWLVMKGRVDSAREVLMKTNERDDEAEERLAEIQLAAAHTEGSED-----------RPVWREL-LSPSPVVRKMLIVGFGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGMTLCLFCLSFTLTFLGQGT----LGITLALLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTFFVFSLVSALSVIFVYVLVPETSGKSLEQIE 497
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: YWTG_BACSU (Putative metabolite transport protein YwtG OS=Bacillus subtilis (strain 168) OX=224308 GN=ywtG PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 3.305e-69 Identity = 153/466 (32.83%), Postives = 257/466 (55.15%), Query Frame = 1 Query: 61 KPKSNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVTEKNTGEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSKLMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYTVLPETRGKTLEDME 1458 K +SN + + ++ L GYD GV+SGA +++K++L ++ +++ + + +++GS AG+ +D GR+ I+ A +F +G + + +PN ++ R + G+ +G + I P+Y +E++P RG L+S ++ I GILL YI NY F+ WR MLG+ PS+LL +G+L MPESPRWL G +A K+L K +K+ Q + +IK+A EK EG KELF P +R +IA LG+ F QQ G + ++ Y+P+ F G ++ +L TV +G V L LVA ++D++GR+PLLL GMV+SL+ LA+ D + + W ++ + ++ F++ GP+ WV E+FPL +R G ++ + ++S+T+ L +AI I F +Y I + +LF + ET+G++LE++E Sbjct: 2 KKQSNIWLY---FFGALGGALYGYDTGVISGAILFMKKELGLNAFTEGLVVSSLLVGAILGSGAAGKLTDRFGRKKAIMAAALLFCIGGLGVALAPNTGVMVLFRIILGLAVGTSTTIVPLYLSELAPKHKRGALSSLNQLMITVGILLSYIVNYIFADAE---AWRWMLGLAAVPSLLLLIGILFMPESPRWLFTNGEESKAKKILEKLRGTKDIDQ-EIHDIKEA---------------EKQD-EGGLKELF---DPWVRPALIAGLGLAFLQQFIGTNTIIYYAPKTFTNVGF-GNSASILGTVGIGTVNVLMTLVAIKIIDKIGRKPLLLFGNAGMVISLIVLALVNLFFDNTPAA-SWT---TVICLGVFIVVFAVSWGPVVWVMLPELFPLHVRGIGTGVSTLMLHVGTLIVSLTYPILMEAIGISYLFLIYAAIGIMAFLFVRFKVTETKGRSLEEIE 436
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: CSBC_BACSU (Probable metabolite transport protein CsbC OS=Bacillus subtilis (strain 168) OX=224308 GN=csbC PE=1 SV=3) HSP 1 Score: 228.024 bits (580), Expect = 1.829e-67 Identity = 152/471 (32.27%), Postives = 253/471 (53.72%), Query Frame = 1 Query: 61 KPKSNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVTEKNTGEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSKLMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAG--VVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYTVLPETRGKTLEDMEGSF 1467 K + KY ++ +L GYD GV+SGA ++I D+ ++ + +++ ++ L ++ GS L+G SD GRR + IF +GA+ FS L+ R + G+ +G + + PVY +E++P RG L + + I GILL YI NY F+ WR M+G+ P++LL +G+ MPESPRWLV RG EA +++N T D K + ++ LAE+KQ + +K T GV K ++ P +++ +G+ FQQA G++ V+ Y+P IF KAG+ L T+ +G + + + A ++DRVGR+ LL+ G+ LSL L+ L + S S W +++ + Y+ + GP+ WV E+FP +A+GAA G +V + ++S+ F + A+ I F ++ I + + F + ++PET+GK+LE++E S Sbjct: 2 KKDTRKYMI--YFFGALGGLLYGYDTGVISGALLFINNDIPLTTLTEGLVVSMLLLGAIFGSALSGTCSDRWGRRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVPVYLSEMAPTKIRGTLGTMNNLMIVTGILLAYIVNYLFTPFE---AWRWMVGLAAVPAVLLLIGIAFMPESPRWLVKRGSEEEARRIMNITHDPK-DIEMELAEMKQG------------EAEKKETTLGVLKAKWIRP------MLLIGVGLAIFQQAVGINTVIYYAPTIFTKAGLGTSASA-LGTMGIGILNVIMCITAMILIDRVGRKKLLIWGSVGITLSLAALSGVLLTLGLSAST-AW---MTVVFLGVYIVFYQATWGPVVWVLMPELFP--SKARGAATGFTTLVLSAANLIVSLVFPLMLSAMGIAWVFMVFSVICLLSFFFAFYMVPETKGKSLEEIEASL 441
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: XYLT_LACBR (D-xylose transporter OS=Lactobacillus brevis OX=1580 GN=xylT PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.277e-64 Identity = 151/462 (32.68%), Postives = 248/462 (53.68%), Query Frame = 1 Query: 106 SMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVTEKNTGEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQSNSKLMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIAAVGWLFFYT-VLPETRGKTLEDMEGSFGTFRAKS 1488 ++ +L GYD GV+SGA ++I++ + + Q ++ + L +++G+ + G +SD GRR ++ + IFFVGA+ FSP + L+ R + G+ +G A + P Y AE++P+ RG ++S ++ + GILL YI+NY+FS GWR MLG P+ LL LG L +PESPR+LV G L EA VL+ + + A + + ND +Q + K G W ELF +R +I +G+ FQQ G + V+ Y+P IF G + LLA + +G + +A ++D++ R+ ++ GM +SL ++I + S + + +S+ + Y+A FS GP+ WV E+FPL +R G + V+N T + ++S+TF SL G+ F+ +GI ++F + ETR ++LED+E T RAK+ Sbjct: 14 ALGGLLFGYDTGVISGAILFIQKQMNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILLAYITNYSFS--GFYTGWRWMLGFAAIPAALLFLGGLILPESPRFLVKSGHLDEARHVLDTMNKHDQVA------------VNKEIND--IQESAKIVSGG-WSELF---GKMVRPSLIIGIGLAIFQQVMGCNTVLYYAPTIFTDVGF-GVSAALLAHIGIGIFNVIVTAIAVAIMDKIDRKKIVNIGAVGMGISLFVMSIGMKFSGGSQTAAI----ISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTFPSLLDFFGT-GSLFIGYGILCFASIWFVQKKVFETRNRSLEDIE---ATLRAKT 446
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca OX=571 GN=araE PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 9.482e-62 Identity = 141/473 (29.81%), Postives = 243/473 (51.37%), Query Frame = 1 Query: 52 PSKKPKSNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFVGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASTRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGVGVFPSILLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVTEKNTGEGVWKELFLHPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTQKLLATVAVGFVKTLFILVATFMLDRVGRRPXXXXXXXXXXXXXXXXXXXXXXXDQ--SNSKLMWAIGLSITMVLTYVATFSIGSGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLY--FGIAAVGWLFFYTVLPETRGKTLEDME 1458 P + + + +I A++ +L G DIGV++GA +I +S E ++ + L + IG+ G S +GR+Y+++ +F G++ F+ + L+ R V G+ +G A AP+Y +E++ + RG + S ++ + GI++ ++S+ AFS WR MLGV P+++L + V+ +P SPRWL +GR EA +VL D+ E+A+ L EI+++ + +G W +R V + + QQ +G++ ++ Y+PRIF+ AG T Q+++AT+ VG +A F +D+ GR+P L M + L L L D ++S L W LS+ M + +A +++ + P+ W+ SEI PL+ R G N ++ +I TFL+L AI G F+LY +A +G F+ ++PET+ TLE +E Sbjct: 12 PRTQRDTRRMNQFVSIAAAVAGLLFGLDIGVIAGALPFITDHFVLSSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVMAFLSDTAFSYSG---NWRAMLGVLALPAVVLIILVIFLPNSPRWLAEKGRHVEAEEVLRMLRDTSEKARDELNEIRESLKLK----------------QGGWA--LFKVNRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMVATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMAIGTLVLGYCLMQFDNGTASSGLSW---LSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDAIGAAGTFWLYTALNVAFIGVTFW--LIPETKNVTLEHIE 458 The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan08g170600 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g170600; organism=Vigna angularis; type=mRNA; length=2017bpback to top protein sequence of LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1 >LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=522bpback to top mRNA from alignment at Chr_8-CM003378.1:27146935..27148951+ Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g170600; organism=Vigna angularis; type=mRNA; length=2017bp; location=Sequence derived from: Chr_8-CM003378.1:27146935..27148951+ (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr_8-CM003378.1:27146935..27148951+ >LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g170600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g170600; organism=Vigna angularis; type=CDS; length=1569bp; location=Sequence derived from: Chr_8-CM003378.1:27146935..27148951+ (Vigna angularisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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