LR48_mrnaVigan08g175000

Transcript Overview
NameLR48_mrnaVigan08g175000
Unique NameLR48_mrnaVigan08g175000_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length3635
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_8-CM003378.1supercontigChr_8-CM003378.1:27520852..27524486 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR119Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR125Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR126Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR147Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR149Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL001Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR074Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR080Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR095Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0088Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0301Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0537Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0814Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1143Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1201Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR179Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR180Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0222Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0234Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0247Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR151Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR171Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR187Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR111Pisum sativum Cameor genome v1aPisum sativum
aspsR128Pisum sativum Cameor genome v1aPisum sativum
aspsR154Pisum sativum Cameor genome v1aPisum sativum
aspsR159Pisum sativum Cameor genome v1aPisum sativum
aspsR165Pisum sativum Cameor genome v1aPisum sativum
aspvR116Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR130Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR172Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR093Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR130Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR131Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR126Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR161Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR127Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR149Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR166Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR101Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR117Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR119Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR117Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR148Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR155Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR160Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR162Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR088Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR125Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR127Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR108Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR111Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR112Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR134Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR136Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Ca_18780.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.011G042200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_004507420.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_17313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_23461Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.6g042840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_15398Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat7g140200.1Pisum sativum Cameor genome v1aPisum sativum
evm.model.Chr11.1664.1.62113172Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cr_15832.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
jg30498.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_03402Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun11g178300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.6g051480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_014638894.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_021889Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan08g175000gene-LR48_Vigan08g175000_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g175000LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-start_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27520852..27520854LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-start_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27520852..27520854Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27520852..27520929LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27520852..27520929Vigna angularisexon
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521363..27521404LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521363..27521404Vigna angularisexon
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521573..27521752LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521573..27521752Vigna angularisexon
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521844..27522008LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521844..27522008Vigna angularisexon
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27522872..27523072LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27522872..27523072Vigna angularisexon
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27523290..27523787LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27523290..27523787Vigna angularisexon
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27523915..27524049LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27523915..27524049Vigna angularisexon
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27524130..27524486LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27524130..27524486Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27520930..27521362LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27520930..27521362Vigna angularisintron
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521405..27521572LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521405..27521572Vigna angularisintron
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521753..27521843LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27521753..27521843Vigna angularisintron
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27522009..27522871LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27522009..27522871Vigna angularisintron
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27523073..27523289LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27523073..27523289Vigna angularisintron
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27523788..27523914LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27523788..27523914Vigna angularisintron
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27524050..27524129LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27524050..27524129Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS7092CDS7092_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-stop_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27524484..27524486LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1-stop_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:27524484..27524486Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP5B_ARATH (Probable nucleolar protein 5-2 OS=Arabidopsis thaliana OX=3702 GN=NOP5-2 PE=1 SV=1)

HSP 1 Score: 731.48 bits (1887), Expect = 0.000e+0
Identity = 364/445 (81.80%), Postives = 413/445 (92.81%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCENETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADSVIGQ 1335
            +LVL+ET AGFALFKV DEGK++ VEDL K+F + D+AR++VKLKAF KF+NTSEALEA   L++G  SKGLRKFL+ +C+ ETL VADSKLGNVIKEKLKIDCIHNNAVMEL+RGVR+Q TELISGL  QD+APMSLGLSHSL+RYKLKFS+DKVDTMI+QAIGLLDDLDKELNTYAMRVREWYGWHFPEL KI+ DNI YA++VKLMG+RVNAA+LDFSEIL++E+EA+LK+AAVISMGTE+ DLDL +IRELCDQVL+LSEYRAQLYDYLKSRMNTIAPNLTA+VGELVGARLI+HGGSLLNL+KQPGSTVQILGAEKALFRALKTKHATPKYGLI+HASL+GQAA K KGKISRSLAAKT LAIR DALGD QDNTMGLENRAKLEARLRNLEGK+LGR +GS+KGKPKIE Y+KD+K G+GGLITPAKTYN +ADS++G+
Sbjct:    2 VLVLYETAAGFALFKVKDEGKMANVEDLCKEFDTPDSARKMVKLKAFEKFDNTSEALEAVAKLLEGAPSKGLRKFLKANCQGETLAVADSKLGNVIKEKLKIDCIHNNAVMELLRGVRSQFTELISGLGDQDLAPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNRVNAAKLDFSEILADEIEADLKDAAVISMGTEVSDLDLLHIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDALGDSQDNTMGLENRAKLEARLRNLEGKDLGRLSGSSKGKPKIEVYNKDKKMGSGGLITPAKTYNTAADSLLGE 446          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP5A_ARATH (Probable nucleolar protein 5-1 OS=Arabidopsis thaliana OX=3702 GN=NOP5-1 PE=1 SV=2)

HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0
Identity = 361/443 (81.49%), Postives = 409/443 (92.33%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCENETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADSVI 1329
            ML+LFETP GFA+FKVL+EGKLS VEDL  +FS+A  AR++VKL AF KF+NT+EALEA   L++G  SKGLRKFL+ +C  ETL VADSKLGN+IKEKLKI C+HNNAVMEL+RG+R+QLTELISGL  QD+ PMSLGLSHSL+RYKLKFS+DKVDTMI+QAIGLLDDLDKELNTYAMRVREW+GWHFPEL KIVQDNI YA+AVKLMG+R+NAA+LDFSEIL++E+EAELKEAAVISMGTE+ DLDL +IRELCDQVL+L+EYRAQLYDYLKSRMNTIAPNLTA+VGELVGARLI+HGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLI+HAS++GQAA K KGKISRSLAAK+ LAIRCDALGD QDNTMG+ENR KLEARLR LEGK+LGR +GSAKGKPKIE YDKD+KKG+GGLITPAKTYN +ADS++
Sbjct:    1 MLILFETPGGFAIFKVLNEGKLSNVEDLGNEFSTAKLARKMVKLVAFDKFDNTAEALEAVAKLLEGTPSKGLRKFLKANCVGETLAVADSKLGNIIKEKLKIVCVHNNAVMELLRGIRSQLTELISGLGDQDLGPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAKLDFSEILADEIEAELKEAAVISMGTEVSDLDLLHIRELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSLAAKSVLAIRCDALGDSQDNTMGVENRLKLEARLRTLEGKDLGRLSGSAKGKPKIEVYDKDKKKGSGGLITPAKTYNTAADSLL 443          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP58_HUMAN (Nucleolar protein 58 OS=Homo sapiens OX=9606 GN=NOP58 PE=1 SV=1)

HSP 1 Score: 508.449 bits (1308), Expect = 3.800e-175
Identity = 270/445 (60.67%), Postives = 334/445 (75.06%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCE--NETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADSVI 1329
            MLVLFET  G+A+FKVL+E KL +V+ LWK+F + + A ++VKLK F KF++T+EAL A T L++GK +K L+K L+   +  +E L VAD+KLG VIKEKL + CIH+  V ELMRG+R+Q+  LI G+  ++MA M LGL+HSLSRY+LKFSADKVDTMIVQAI LLDDLDKELN Y MR REWYGWHFPEL KI+ DN+ Y + ++ +GDR N A    SE+L EEVEAE+K AA ISMGTE+ + D+ NI  LC QV+ +SEYR QLY+YL++RM  IAPN+T MVGELVGARLIAH GSLLNLAK   STVQILGAEKALFRALK++  TPKYGLIYHASL+GQ + K KGKISR LAAKT LAIR DA G+   + MG+ENRAKLEARLR LE + + + +G+ K   K E Y+           +  KTY+ S DS +
Sbjct:    1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHK---------SEVKTYDPSGDSTL 436          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP58_MACFA (Nucleolar protein 58 OS=Macaca fascicularis OX=9541 GN=NOP58 PE=2 SV=1)

HSP 1 Score: 507.679 bits (1306), Expect = 6.922e-175
Identity = 270/445 (60.67%), Postives = 334/445 (75.06%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCE--NETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADSVI 1329
            MLVLFET  G+A+FKVL+E KL +V+ LWK+F + + A ++VKLK F KF++T+EAL A T L++GK +K L+K L+   +  +E L VAD+KLG VIKEKL + CIH+  V ELMRG+R+Q+  LI G+  ++MA M LGL+HSLSRY+LKFSADKVDTMIVQAI LLDDLDKELN Y MR REWYGWHFPEL KI+ DN+ Y + ++ +GDR N A    SE+L EEVEAE+K AA ISMGTE+ + D+ NI  LC QV+ +SEYR QLY+YL++RM  IAPN+T MVGELVGARLIAH GSLLNLAK   STVQILGAEKALFRALK++  TPKYGLIYHASL+GQ + K KGKISR LAAKT LAIR DA G+   + MG+ENRAKLEARLR LE + + + +G+ K   K E Y+           +  KTY+ S DS +
Sbjct:    1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHK---------SEVKTYDPSGDSTL 436          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP58_MOUSE (Nucleolar protein 58 OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1)

HSP 1 Score: 507.294 bits (1305), Expect = 1.268e-174
Identity = 271/445 (60.90%), Postives = 335/445 (75.28%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCE--NETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADSVI 1329
            MLVLFET  G+A+FKVL+E KL +V+ LWK+F + + A ++VKLK F KF++T+EAL A T L++GK +K L+K L+   +  +E L VAD+KLG VIKEKL + CIH+  V ELMRG+R+Q+  LI G+  ++MA M LGL+HSLSRY+LKFSADKVDTMIVQAI LLDDLDKELN Y MR REWYGWHFPEL KI+ DN+ Y + ++ +GDR N A    SE LSEEVEAE+K AA ISMGTE+ + D+ NI  LC QV+ +SEYR QLY+YL++RM  IAPN+T MVGELVGARLIAH GSLLNLAK   STVQILGAEKALFRALK++  TPKYGLIYHASL+GQ++ K KGKISR LAAKT LAIR DA G+   + MG+ENRAKLEARLR LE + + + +G+ K   K E Y+           +  KTY+ S DS +
Sbjct:    1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASASLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQSSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGIENRAKLEARLRILEDRGIRKISGTGKALAKAEKYEHK---------SEVKTYDPSGDSTL 436          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP58_RAT (Nucleolar protein 58 OS=Rattus norvegicus OX=10116 GN=Nop58 PE=1 SV=1)

HSP 1 Score: 504.982 bits (1299), Expect = 8.965e-174
Identity = 271/445 (60.90%), Postives = 333/445 (74.83%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCE--NETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADSVI 1329
            MLVLFET  G+A+FKVL+E KL +V+ LWK+F + + A ++VKLK F KF++T+EAL A T L++GK +K L+K L+   +  +E L VAD+KLG VIKEKL + CIH+  V ELMRG+R+Q+  LI G+  ++MA M LGL+HSLSRY+LKFSADKVDTMIVQAI LLDDLDKELN Y MR REWYGWHFPEL KI+ DN+ Y + ++ +GDR N A    SE LSEEVEAE+K AA ISMGTE+ + D+ NI  LC QV+ +SEYR QLY+YL++RM  IAPN+T MVGELVGARLIAH GSLLNLAK   STVQILGAEKALFRALK++  TPKYGLIYHASL+GQ + K KGKISR LAAKT LAIR DA G+   + MG ENRAKLEARLR LE + + + +G+ K   K E Y+           +  KTY+ S DS +
Sbjct:    1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASATLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGAENRAKLEARLRILEDRGIRKISGTGKALAKAEKYEHK---------SEVKTYDPSGDSTL 436          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP5C_ARATH (Putative nucleolar protein 5-3 OS=Arabidopsis thaliana OX=3702 GN=NOP5-3 PE=3 SV=2)

HSP 1 Score: 489.574 bits (1259), Expect = 6.037e-169
Identity = 269/426 (63.15%), Postives = 327/426 (76.76%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCEN-ETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGA 1275
            MLVLFET  GFALFKVLDEGKLS VEDL  +F SA++AR++                             GL KFL+ +C++ E L VAD KLG++I EKL I+C+HN+AVMEL+RGVR+QLTEL+SGL   D+AP+SL LSH L+RYKLK ++DKV+TMI+ +I LLDDLDKELNTY   V E YG HFPEL  IVQDNI YA+ VKLMG+R+NAA LDFSEIL++EVEAELKEA+++S  TE+ DLDL +I+ELCDQVL+++E +  L D LK++MN IAPNLTA+VGELVGARLI+H GSL NL+K P ST+QILGAEK L++ALKTK ATPKYGLIYHA L+ QAA + KGKI+RSLAAK+ALAIRCDA G+GQDNTMG+E+R KLEARLRNLEG +LG        + + E  DKD KK A
Sbjct:    1 MLVLFETSGGFALFKVLDEGKLSNVEDLGTEFYSAESARRM-----------------------------GLHKFLKNNCDDGEILAVADPKLGDIITEKLDIECVHNDAVMELLRGVRSQLTELLSGLDDNDLAPVSLELSHILARYKLKITSDKVETMIILSISLLDDLDKELNTYTTSVCELYGLHFPELANIVQDNILYAKVVKLMGNRINAATLDFSEILADEVEAELKEASMVSTRTEVSDLDLMHIQELCDQVLSIAEDKTLLCDDLKNKMNKIAPNLTALVGELVGARLISHCGSLWNLSKLPWSTIQILGAEKTLYKALKTKQATPKYGLIYHAPLVRQAAPENKGKIARSLAAKSALAIRCDAFGNGQDNTMGVESRLKLEARLRNLEGGDLG------ACEEEEEVNDKDTKKEA 391          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP58_SCHPO (Nucleolar protein 58 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nop58 PE=1 SV=1)

HSP 1 Score: 465.307 bits (1196), Expect = 1.614e-158
Identity = 254/408 (62.25%), Postives = 312/408 (76.47%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLR--VHCENETLGVADSKLGNVIKE--KLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNT---MGLENRAKLEARLRNLEGKEL 1203
            M +L ET AG+A+FK  D+  L K + L +D  S + A  ++KL++F+KFE+T +AL+  + L++GK S  L   L      ++ TL VAD KLGN I +   L+ + I +++V +L RG+R  L+ LISGLA  D+  MSLGLSHSLSR+KLKFS DKVDTMIVQAI LLDDLDKELNTYAMRVREWYGWHFPE+ KI+QDN+ YAR +K MG R   +E DFS+IL EE+EA LK AA ISMGTEI + DL NI  L DQVL L+ YRAQL +YL++RM  IAPNLTA+VGELVGARLIAH GSL+NLAKQP ST+QILGAEKALFRALKTKH+TPKYGLIYHASL+GQA +K KGKI+R LA K AL++R DAL D +D T   +GLENR ++E RLR+LEG +L
Sbjct:    1 MFILTETAAGYAIFKAKDK-LLKKRDALIEDLKSPEGASNLLKLQSFAKFESTVDALDNVSALVEGKVSSKLSSLLEGLSDSKSSTLVVADPKLGNAINKLPGLEFEIISDSSVQDLYRGIREHLSSLISGLAPSDLNAMSLGLSHSLSRHKLKFSPDKVDTMIVQAIALLDDLDKELNTYAMRVREWYGWHFPEMGKIIQDNLAYARVIKAMGMRTKCSETDFSDILPEEIEATLKSAAEISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQAIAPNLTALVGELVGARLIAHAGSLMNLAKQPASTIQILGAEKALFRALKTKHSTPKYGLIYHASLVGQANSKNKGKIARVLATKAALSLRVDALSD-KDTTNGNIGLENRIRVENRLRSLEGGKL 406          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP58_USTMA (Nucleolar protein 58 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=NOP58 PE=3 SV=1)

HSP 1 Score: 454.136 bits (1167), Expect = 4.350e-153
Identity = 253/460 (55.00%), Postives = 320/460 (69.57%), Query Frame = 1
Query:    7 VLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHC------ENETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISG------LAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDN------TMGLENRAKLEARLRNLE---GKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADS 1323
            VLFET  GF LF V D  KL   ++L +   SA+ A  ++KL A  +F NT+EA+E  + + +GK SK L+KFL          E E L VA+SKL + I +KL I   +++ +++L RG+R  L  L+S       L  +D+  MSLGLSHSLSRYKLKFS DKVDTM+VQAIGLLDDLDKE+N YAMRV+EWYGWHFPE+ KI+ DN+ YA+ ++ MG R NA+  DFSEIL EE+E  LK AA ISMGTEI + DL +I  LCDQV+++++YR QLY YL++RM  IAPNLTA+VG+LVGARLI+H GSL+NLAK P STVQILGAEKALFRALKTKH TPKYGLIYH+SL+GQA  K KGK++R +A K AL+IR DAL D          T+G+E RAKLE+RLR LE   G    R A +A G       D+  K+    +    ++YNA+AD+
Sbjct:    4 VLFETAVGFCLFNVSDSSKLEATKNLHESLDSAEGASNLLKLSAIHRFTNTAEAVEDISAINEGKMSKSLKKFLTDEIVEGKGKEKENLIVAESKLASNIAKKLGIQVTYDSELLDLYRGIRENLATLLSSSSGDESLDPRDLNTMSLGLSHSLSRYKLKFSPDKVDTMVVQAIGLLDDLDKEINIYAMRVKEWYGWHFPEMGKIITDNLAYAKVIRAMGFRTNASATDFSEILPEEIEETLKAAAEISMGTEISETDLEHIWSLCDQVISITQYRTQLYQYLQNRMAAIAPNLTALVGDLVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHSSLVGQAPQKLKGKMARMVATKAALSIRLDALADADTKSDEGAPTVGIEARAKLESRLRALEMQSGLSGMRSARNAAG-------DQGHKQKGFQMEAGGRSYNAAADA 456          
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Match: NOP58_CRYNJ (Nucleolar protein 58 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=NOP58 PE=3 SV=1)

HSP 1 Score: 446.047 bits (1146), Expect = 3.124e-150
Identity = 245/470 (52.13%), Postives = 315/470 (67.02%), Query Frame = 1
Query:    1 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFL--------------RVHCENETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFXXXXXXXXXXXXXXXXXXSMGTEIGDLDLANIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNT------MGLENRAKLEARLRNLE---GKELGRFAGSAKG-----KPKIEAYDKDRKKGAGGLITPAKTYNASADSV 1326
            MLVL ET  GF +FK+  + K+   +DLWK+F + + A + +K++A  +F +T+ A+E  T + DG+ +  L +FL              +     E L V+D KL   I + L I  + +++  +L RG+R QL  L+ G+  +D+  MSLGL HSLSR+KLKFS DKVDTM++QAI LLDDLDKE+N YAMRV+EWYGWHFPE+ KI+ DNI +AR VK MG R NA   DFS +L E++EA LK AA +SMGTEI D D+ +I  LCDQV+++SEYR QL +YL++RM  IAPNLTA+VGELVGARLI+H GSL+NLAK P STVQILGAEKALFRALKTKH TPKYGLIYHASLIGQA  K KGK++R +A K AL+IR DAL D    +      +G+ NR KLE+RLR LE   G +  R   SA G     +P+ E        G  G      +YNA+ D+V
Sbjct:    1 MLVLTETSVGFVVFKLSSDAKIDN-KDLWKEFETPEGANKALKVQAIQRFTSTASAVEDLTAVQDGRLTDSLSRFLLDTVGGADDGEKKKKKKKIEEMLVVSDPKLAGTINKALSIPVLSDSSTQDLYRGIRQQLASLLGGVDQKDLNTMSLGLGHSLSRFKLKFSTDKVDTMVIQAIALLDDLDKEINIYAMRVKEWYGWHFPEMAKIIVDNIAFARVVKAMGFRTNAVTTDFSLLLPEDLEATLKSAAELSMGTEISDSDMTHIHSLCDQVISISEYRTQLSEYLRNRMQAIAPNLTALVGELVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAPQKLKGKMARMVATKAALSIRVDALSDADSRSDVSAAEVGISNRVKLESRLRALEHQAGIQSVRKVVSANGQQGRQQPRFEM------SGVTG------SYNAATDNV 457          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan08g175000 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
NOP5B_ARATH0.000e+081.80Probable nucleolar protein 5-2 OS=Arabidopsis thal... [more]
NOP5A_ARATH0.000e+081.49Probable nucleolar protein 5-1 OS=Arabidopsis thal... [more]
NOP58_HUMAN3.800e-17560.67Nucleolar protein 58 OS=Homo sapiens OX=9606 GN=NO... [more]
NOP58_MACFA6.922e-17560.67Nucleolar protein 58 OS=Macaca fascicularis OX=954... [more]
NOP58_MOUSE1.268e-17460.90Nucleolar protein 58 OS=Mus musculus OX=10090 GN=N... [more]
NOP58_RAT8.965e-17460.90Nucleolar protein 58 OS=Rattus norvegicus OX=10116... [more]
NOP5C_ARATH6.037e-16963.15Putative nucleolar protein 5-3 OS=Arabidopsis thal... [more]
NOP58_SCHPO1.614e-15862.25Nucleolar protein 58 OS=Schizosaccharomyces pombe ... [more]
NOP58_USTMA4.350e-15355.00Nucleolar protein 58 OS=Ustilago maydis (strain 52... [more]
NOP58_CRYNJ3.124e-15052.13Nucleolar protein 58 OS=Cryptococcus neoformans va... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012976NOSICSMARTSM00931NOSIC_2coord: 159..211
e-value: 1.8E-33
score: 127.2
NoneNo IPR availableGENE3D1.10.150.460coord: 190..240
e-value: 8.4E-47
score: 160.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..551
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..551
IPR042239Nop, C-terminal domainGENE3D1.10.246.90coord: 272..399
e-value: 6.1E-51
score: 173.3
IPR012974NOP5, N-terminalPFAMPF08156NOP5NTcoord: 2..66
e-value: 7.2E-22
score: 77.4
IPR002687Nop domainPFAMPF01798Nopcoord: 166..394
e-value: 2.9E-83
score: 278.8
IPR002687Nop domainPROSITEPS51358NOPcoord: 280..398
score: 36.159
IPR029012Helix hairpin bin domain superfamilyGENE3D1.10.287.660coord: 160..271
e-value: 8.4E-47
score: 160.3
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 153..397

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g175000; organism=Vigna angularis; type=mRNA; length=3635bp
ATGCTTGTGTTGTTTGAAACTCCTGCCGGGTTTGCCCTGTTTAAAGTTCT
GGATGAAGGCAAGCTTTCAAAAGTTGAGGTATACATTCTTCATTTTTGTC
GTGAAAATTTAAAGATTGCATTGCTGGATTTTTCGTGGAGCGTTTTCTGt
tggtttttctttcttttcttagttTACTTGACTCATTCTGAAGGAGGCAT
GCATTTTTCTTTGTCAATTATTGAAACGATTGGATCTTTAGAAATTTCTG
AAGGGGAAACGATATTAATTTCTGATTACATCCTGAACCTTAGTGTGTTA
CTTTAACGAAATGCCTTGCATGGAACTATTACTaccattttattaattat
ttccgAGCTCTATATTCTTACATACTCTTTCATCTAAGCATTTGAAATTT
GGAACGTAGttgagtttgttttattattaatatgttatgtcgtttgtttt
tctttcccaCATTCTGAAGCTCTGTTCAAgaagtttaatttatacttgtt
tCTTAACGCAGGACTTGTGGAAGGACTTTTCCAGCGCAGACACTGCTAGA
CAGGTTCTCCTCTTTATCCATTTCTTGTCACCCATTTTTCCCTGGCTATT
TGATGGTATCAATGTGAAAGTGTGAAAACTGTGCTCAATCTATTTATACG
AATCCAGTTTTTTTTCTCTGGGAAAGTTTTTTAATTGCTTGTGAAGCTAA
TCCAAATTTCCACAATTTTAGGTGGTCAAGTTGAAAGCGTTTTCTAAGTT
CGAGAACACTTCAGAAGCTCTAGAAGCAGCGACTTTACTAATTGATGGAA
AAGCAAGCAAAGGTCTTCGCAAGTTCTTGCGTGTTCATTGTGAAAATGAA
ACACTTGGTGTGGCCGATTCAAAACTTGGGAATGTGATTAAAGAGAAATT
GGTGGGCTTATTTCCCAATAGAACATGTGATATGATAATTTATGTTCCAC
TCATCTATctgataaattaatttgttttgttgatcCTTTTAGAAAATCGA
TTGTATTCACAACAATGCAGTCATGGAGTTGATGAGAGGTGTCAGAAATC
AGTTAACTGAACTCATATCTGGTCTAGCTGTTCAAGACATGGCTCCAATG
AGCCTGGGTTTATCCCATAGCTTATCCAGATACAAGTTGAAGTTTAGCGC
AGATAAGGTGTAATTTCTGTTGACTTGATGGTTATAAGAACTTGACGATA
TAATTGTTCTTGTaccatttttaattatgttttcctATTATGTATTATGC
ATATTGACATCCTTTAGTTATATCCTACTCTTGTATTCACAAAGAATTCT
CCCCAAATAGTGTATTGATTGGTAGGAATGAAGATATCATTGTTTTCTGA
AGGCTGTGAAGCTTTTGTGAATCATATAATGTGAGGAGACTAACATGGTT
AGAATATGAGAAAAGTACACATGTTCCCTTTGATTTTTTCCCCAGAAATT
GCACATAATCGCCTACCTCTTTTAATAGTTACTACAACCTTATAGGAGTA
CACGGATTATTGCTTTTTGAACAATTTACGGTATGGCGGGGAGTTTGATG
AATTATTGCGGGTGTTATTCTCATTTGCTCTTAGAATATGCGTATGCTTC
AACTTCTTAATAGTCATAATTTTATCACGTATCTAATTCCAATGTTTTGT
CCTGCTATTTCTATTTTATCGTTTACATCTTACATTTTAGAAATAAAGTA
TGTCTCATACATCATTGGCACAAATTGTGTGTTTAGTGCCCTTGTTTAGA
GTTCATAGTTTGCATGTTGTCTCACATGTTATTTCCAATTTAGGGCCTTA
TTTTTTGGGTTTAATATCTTTAGGAGTTTTCACTGATACCAAAGTAGCAG
TTTTAGCATTTTCATGAAAATAGTTGGAGTTGGAATATGATGAATCTTTG
ACCTTCTGATGTAGACTTATAAACAAGACGgtgtcaatttatttttgtta
tggaAATTTTTACCTTCGTGAATGATTGTTTATTGAATAACTGTTGGCTG
ACTTCGAGATGTTTGTTTAGGTGGATACCATGATTGTGCAAGCTATTGGT
TTACTTGATGATCTTGATAAAGAGTTGAATACATATGCCATGAGGGTTCG
TGAATGGTATGGTTGGCATTTTCCCGAACTTACTAAAATAGTACAAGATA
ACATCCAATATGCAAGGGCAGTCAAGTTGATGGGTGATCGTGTCAATGCA
GCTGAGCTTGATTTCTCTGAGGTATAATCTCAGTTAAATGCTGCCCTTTT
TTTTGCATTTAAGCAGACATGTGGTTCACAATGAGTTGTAATGTTCAACT
TTACTCCACTGGTGAACAATTTGGTCTGAAAAGTATATGATATTTCTGTG
GTTCACAATGAGTTGTGAAAAGTGATATTTCTATCTTTAACTATGTTTCT
TTatagatttttaattattttcatacgTTTTGTCCCAGATTTTGtctgag
gaagtggaggcagaaCTTAAGGAGGCAGCTGTAATATCTATGGGAACTGA
AATCGGTGATCTTGATTTGGCAAATATTAGGGAACTCTGTGACCAGGTTT
TGGCTCTTTCGGAATACAGGGCACAACTATATGATTATCTGAAGAGCAGG
ATGAACACCATTGCACCCAATTTGACTGCGATGGTTGGGGAGCTTGTTGG
TGCTCGTCTCATTGCCCATGGTGGTAGCTTATTAAATCTTGCAAAGCAGC
CTGGTAGCACTGTGCAGATTCTTGGTGCTGAGAAGGCTCTCTTCAGGGCA
CTGAAGACTAAGCATGCTACTCCGAAGTATGGTCTTATATACCATGCATC
TTTGATTGGTCAGGCAGCTGCAAAGTTCAAGGGGAAAATTTCTCGGTCAC
TTGCTGCAAAGACAGCATTGGCTATTAGGTGTGACGCACTTGGAGATGGC
CAAGACAACACCATGGGATTGGAGAACAGAGCCAAGGTACAtgtgttttg
tttatatatatatatatatatataNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTCTacttttaacaa
gttttttctGCAGCTTGAGGCGCGATTGAGGAACCTTGAAGGGAAAGAGT
TGGGTCGTTTTGCCGGTTCTGCTAAGGGAAAACCTAAGATAGAAGCATAT
GACAAGGACAGAAAGAAAGGAGCGGGAGGACTGATCACCCCGGCTAAGGT
TTGTTTCTTGTTCCTTATGGTGTTGTTaataacttcaattttattttctg
tctaTGCTGATTGTCGTTTTCCTTGTAGACATATAATGCTTCGGCTGATT
CAGTTATCGGGCAAATTGTCAATTCCGCCATGGATGAGGATAAACAAGAG
GCTTCTGTTGctgataaaaagaaagaaaagaagaaaaagaaggggaAAAA
TGAAGAGGAACCAACTGTTCAAGCTGATGTTGCTGAGGAGCCAGAACCCG
AAgttgagaagaaagaaaagaagaagaaaaggaaggagGCTAGTGAGAAT
ACTGAGTTGCAGAATGGGAATGGAGACATGAATGcaggagagaagaagaa
aaaacggAAAAAGCATGCAGAGCAAGAAGAATCTCCTGAAATGCCAAGCa
agaagaaagggaaaaaaaagaaaactgaaaacTAA
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protein sequence of LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1

>LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=551bp
MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKF
ENTSEALEAATLLIDGKASKGLRKFLRVHCENETLGVADSKLGNVIKEKL
KIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLK
FSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNI
QYARAVKLMGDRVNAAELDFSEILSEEVEAELKEAAVISMGTEIGDLDLA
NIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHG
GSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAA
KFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKE
LGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADSVIGQIVNSA
MDEDKQEASVADKKKEKKKKKGKNEEEPTVQADVAEEPEPEVEKKEKKKK
RKEASENTELQNGNGDMNAGEKKKKRKKHAEQEESPEMPSKKKGKKKKTE
N
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mRNA from alignment at Chr_8-CM003378.1:27520852..27524486+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g175000; organism=Vigna angularis; type=mRNA; length=3635bp; location=Sequence derived from: Chr_8-CM003378.1:27520852..27524486+ (Vigna angularis
ATGCTTGTGTTGTTTGAAACTCCTGCCGGGTTTGCCCTGTTTAAAGTTCT GGATGAAGGCAAGCTTTCAAAAGTTGAGGTATACATTCTTCATTTTTGTC GTGAAAATTTAAAGATTGCATTGCTGGATTTTTCGTGGAGCGTTTTCTGt tggtttttctttcttttcttagttTACTTGACTCATTCTGAAGGAGGCAT GCATTTTTCTTTGTCAATTATTGAAACGATTGGATCTTTAGAAATTTCTG AAGGGGAAACGATATTAATTTCTGATTACATCCTGAACCTTAGTGTGTTA CTTTAACGAAATGCCTTGCATGGAACTATTACTaccattttattaattat ttccgAGCTCTATATTCTTACATACTCTTTCATCTAAGCATTTGAAATTT GGAACGTAGttgagtttgttttattattaatatgttatgtcgtttgtttt tctttcccaCATTCTGAAGCTCTGTTCAAgaagtttaatttatacttgtt tCTTAACGCAGGACTTGTGGAAGGACTTTTCCAGCGCAGACACTGCTAGA CAGGTTCTCCTCTTTATCCATTTCTTGTCACCCATTTTTCCCTGGCTATT TGATGGTATCAATGTGAAAGTGTGAAAACTGTGCTCAATCTATTTATACG AATCCAGTTTTTTTTCTCTGGGAAAGTTTTTTAATTGCTTGTGAAGCTAA TCCAAATTTCCACAATTTTAGGTGGTCAAGTTGAAAGCGTTTTCTAAGTT CGAGAACACTTCAGAAGCTCTAGAAGCAGCGACTTTACTAATTGATGGAA AAGCAAGCAAAGGTCTTCGCAAGTTCTTGCGTGTTCATTGTGAAAATGAA ACACTTGGTGTGGCCGATTCAAAACTTGGGAATGTGATTAAAGAGAAATT GGTGGGCTTATTTCCCAATAGAACATGTGATATGATAATTTATGTTCCAC TCATCTATctgataaattaatttgttttgttgatcCTTTTAGAAAATCGA TTGTATTCACAACAATGCAGTCATGGAGTTGATGAGAGGTGTCAGAAATC AGTTAACTGAACTCATATCTGGTCTAGCTGTTCAAGACATGGCTCCAATG AGCCTGGGTTTATCCCATAGCTTATCCAGATACAAGTTGAAGTTTAGCGC AGATAAGGTGTAATTTCTGTTGACTTGATGGTTATAAGAACTTGACGATA TAATTGTTCTTGTaccatttttaattatgttttcctATTATGTATTATGC ATATTGACATCCTTTAGTTATATCCTACTCTTGTATTCACAAAGAATTCT CCCCAAATAGTGTATTGATTGGTAGGAATGAAGATATCATTGTTTTCTGA AGGCTGTGAAGCTTTTGTGAATCATATAATGTGAGGAGACTAACATGGTT AGAATATGAGAAAAGTACACATGTTCCCTTTGATTTTTTCCCCAGAAATT GCACATAATCGCCTACCTCTTTTAATAGTTACTACAACCTTATAGGAGTA CACGGATTATTGCTTTTTGAACAATTTACGGTATGGCGGGGAGTTTGATG AATTATTGCGGGTGTTATTCTCATTTGCTCTTAGAATATGCGTATGCTTC AACTTCTTAATAGTCATAATTTTATCACGTATCTAATTCCAATGTTTTGT CCTGCTATTTCTATTTTATCGTTTACATCTTACATTTTAGAAATAAAGTA TGTCTCATACATCATTGGCACAAATTGTGTGTTTAGTGCCCTTGTTTAGA GTTCATAGTTTGCATGTTGTCTCACATGTTATTTCCAATTTAGGGCCTTA TTTTTTGGGTTTAATATCTTTAGGAGTTTTCACTGATACCAAAGTAGCAG TTTTAGCATTTTCATGAAAATAGTTGGAGTTGGAATATGATGAATCTTTG ACCTTCTGATGTAGACTTATAAACAAGACGgtgtcaatttatttttgtta tggaAATTTTTACCTTCGTGAATGATTGTTTATTGAATAACTGTTGGCTG ACTTCGAGATGTTTGTTTAGGTGGATACCATGATTGTGCAAGCTATTGGT TTACTTGATGATCTTGATAAAGAGTTGAATACATATGCCATGAGGGTTCG TGAATGGTATGGTTGGCATTTTCCCGAACTTACTAAAATAGTACAAGATA ACATCCAATATGCAAGGGCAGTCAAGTTGATGGGTGATCGTGTCAATGCA GCTGAGCTTGATTTCTCTGAGGTATAATCTCAGTTAAATGCTGCCCTTTT TTTTGCATTTAAGCAGACATGTGGTTCACAATGAGTTGTAATGTTCAACT TTACTCCACTGGTGAACAATTTGGTCTGAAAAGTATATGATATTTCTGTG GTTCACAATGAGTTGTGAAAAGTGATATTTCTATCTTTAACTATGTTTCT TTatagatttttaattattttcatacgTTTTGTCCCAGATTTTGtctgag gaagtggaggcagaaCTTAAGGAGGCAGCTGTAATATCTATGGGAACTGA AATCGGTGATCTTGATTTGGCAAATATTAGGGAACTCTGTGACCAGGTTT TGGCTCTTTCGGAATACAGGGCACAACTATATGATTATCTGAAGAGCAGG ATGAACACCATTGCACCCAATTTGACTGCGATGGTTGGGGAGCTTGTTGG TGCTCGTCTCATTGCCCATGGTGGTAGCTTATTAAATCTTGCAAAGCAGC CTGGTAGCACTGTGCAGATTCTTGGTGCTGAGAAGGCTCTCTTCAGGGCA CTGAAGACTAAGCATGCTACTCCGAAGTATGGTCTTATATACCATGCATC TTTGATTGGTCAGGCAGCTGCAAAGTTCAAGGGGAAAATTTCTCGGTCAC TTGCTGCAAAGACAGCATTGGCTATTAGGTGTGACGCACTTGGAGATGGC CAAGACAACACCATGGGATTGGAGAACAGAGCCAAGGTACAtgtgttttg tttatatatatatatatatatataNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTCTacttttaacaa gttttttctGCAGCTTGAGGCGCGATTGAGGAACCTTGAAGGGAAAGAGT TGGGTCGTTTTGCCGGTTCTGCTAAGGGAAAACCTAAGATAGAAGCATAT GACAAGGACAGAAAGAAAGGAGCGGGAGGACTGATCACCCCGGCTAAGGT TTGTTTCTTGTTCCTTATGGTGTTGTTaataacttcaattttattttctg tctaTGCTGATTGTCGTTTTCCTTGTAGACATATAATGCTTCGGCTGATT CAGTTATCGGGCAAATTGTCAATTCCGCCATGGATGAGGATAAACAAGAG GCTTCTGTTGctgataaaaagaaagaaaagaagaaaaagaaggggaAAAA TGAAGAGGAACCAACTGTTCAAGCTGATGTTGCTGAGGAGCCAGAACCCG AAgttgagaagaaagaaaagaagaagaaaaggaaggagGCTAGTGAGAAT ACTGAGTTGCAGAATGGGAATGGAGACATGAATGcaggagagaagaagaa aaaacggAAAAAGCATGCAGAGCAAGAAGAATCTCCTGAAATGCCAAGCa agaagaaagggaaaaaaaagaaaactgaaaacTAA
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Coding sequence (CDS) from alignment at Chr_8-CM003378.1:27520852..27524486+

>LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g175000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g175000; organism=Vigna angularis; type=CDS; length=1656bp; location=Sequence derived from: Chr_8-CM003378.1:27520852..27524486+ (Vigna angularis
ATGCTTGTGTTGTTTGAAACTCCTGCCGGGTTTGCCCTGTTTAAAGTTCT
GGATGAAGGCAAGCTTTCAAAAGTTGAGGACTTGTGGAAGGACTTTTCCA
GCGCAGACACTGCTAGACAGGTGGTCAAGTTGAAAGCGTTTTCTAAGTTC
GAGAACACTTCAGAAGCTCTAGAAGCAGCGACTTTACTAATTGATGGAAA
AGCAAGCAAAGGTCTTCGCAAGTTCTTGCGTGTTCATTGTGAAAATGAAA
CACTTGGTGTGGCCGATTCAAAACTTGGGAATGTGATTAAAGAGAAATTG
AAAATCGATTGTATTCACAACAATGCAGTCATGGAGTTGATGAGAGGTGT
CAGAAATCAGTTAACTGAACTCATATCTGGTCTAGCTGTTCAAGACATGG
CTCCAATGAGCCTGGGTTTATCCCATAGCTTATCCAGATACAAGTTGAAG
TTTAGCGCAGATAAGGTGGATACCATGATTGTGCAAGCTATTGGTTTACT
TGATGATCTTGATAAAGAGTTGAATACATATGCCATGAGGGTTCGTGAAT
GGTATGGTTGGCATTTTCCCGAACTTACTAAAATAGTACAAGATAACATC
CAATATGCAAGGGCAGTCAAGTTGATGGGTGATCGTGTCAATGCAGCTGA
GCTTGATTTCTCTGAGATTTTGtctgaggaagtggaggcagaaCTTAAGG
AGGCAGCTGTAATATCTATGGGAACTGAAATCGGTGATCTTGATTTGGCA
AATATTAGGGAACTCTGTGACCAGGTTTTGGCTCTTTCGGAATACAGGGC
ACAACTATATGATTATCTGAAGAGCAGGATGAACACCATTGCACCCAATT
TGACTGCGATGGTTGGGGAGCTTGTTGGTGCTCGTCTCATTGCCCATGGT
GGTAGCTTATTAAATCTTGCAAAGCAGCCTGGTAGCACTGTGCAGATTCT
TGGTGCTGAGAAGGCTCTCTTCAGGGCACTGAAGACTAAGCATGCTACTC
CGAAGTATGGTCTTATATACCATGCATCTTTGATTGGTCAGGCAGCTGCA
AAGTTCAAGGGGAAAATTTCTCGGTCACTTGCTGCAAAGACAGCATTGGC
TATTAGGTGTGACGCACTTGGAGATGGCCAAGACAACACCATGGGATTGG
AGAACAGAGCCAAGCTTGAGGCGCGATTGAGGAACCTTGAAGGGAAAGAG
TTGGGTCGTTTTGCCGGTTCTGCTAAGGGAAAACCTAAGATAGAAGCATA
TGACAAGGACAGAAAGAAAGGAGCGGGAGGACTGATCACCCCGGCTAAGA
CATATAATGCTTCGGCTGATTCAGTTATCGGGCAAATTGTCAATTCCGCC
ATGGATGAGGATAAACAAGAGGCTTCTGTTGctgataaaaagaaagaaaa
gaagaaaaagaaggggaAAAATGAAGAGGAACCAACTGTTCAAGCTGATG
TTGCTGAGGAGCCAGAACCCGAAgttgagaagaaagaaaagaagaagaaa
aggaaggagGCTAGTGAGAATACTGAGTTGCAGAATGGGAATGGAGACAT
GAATGcaggagagaagaagaaaaaacggAAAAAGCATGCAGAGCAAGAAG
AATCTCCTGAAATGCCAAGCaagaagaaagggaaaaaaaagaaaactgaa
aacTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012976NOSIC
IPR042239Nop_C
IPR012974NOP58/56_N
IPR002687Nop_dom
IPR029012Helix_hairpin_bin_sf
IPR036070Nop_dom_sf