Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Species Type
LR48_mrnaVigan08g186500 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-protein Vigna angularis polypeptide LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1 Vigna angularis polypeptide
The following start_codon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-start_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385237..28385239 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-start_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385237..28385239 Vigna angularis start_codon
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385237..28385438 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385237..28385438 Vigna angularis exon LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385514..28385731 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385514..28385731 Vigna angularis exon LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28386395..28386553 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28386395..28386553 Vigna angularis exon LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387377..28387407 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387377..28387407 Vigna angularis exon LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387516..28387651 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387516..28387651 Vigna angularis exon LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387948..28388035 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-exon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387948..28388035 Vigna angularis exon
The following intron feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385439..28385513 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385439..28385513 Vigna angularis intron LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385732..28386394 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28385732..28386394 Vigna angularis intron LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28386554..28387376 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28386554..28387376 Vigna angularis intron LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387408..28387515 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387408..28387515 Vigna angularis intron LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387652..28387947 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-intron-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28387652..28387947 Vigna angularis intron
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
CDS7167 CDS7167_Va_Jingnong6_v1.1 Vigna angularis CDS
The following stop_codon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-stop_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28388033..28388035 LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1-stop_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28388033..28388035 Vigna angularis stop_codon
Homology
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG_ARATH (Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=1 SV=1)
HSP 1 Score: 384.415 bits (986), Expect = 1.009e-133
Identity = 197/305 (64.59%), Postives = 229/305 (75.08%), Query Frame = 1
Query: 10 RTLTDFFQPASKRLK---------------------------PSLPQSCKSGDANASTLSVDQNLRVEYNKLLAKSKRNLKLCVERVSKTK--GLSGVKLEELLVEETWLDAIPGELQKPYALTLSKFVESEI--SSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCR 831
+TL DFFQPA KRLK P + + D ++S L+ +Q R E+NK +AKSKRNL +C ERV+K K G V L ELLVEE+WL A+PGE KPYA +LS F+E EI S ++YPP HLIFNALN+TPF RVK VI+GQDPYHGPGQAMGLSFSVPEG K+PSSL+NIFKELH+D+GC+IP HGNLQKWAVQGVLLLNAVLTVR Q NSHAKKGWEQFTDAVI++ISQ++EGVVFLLWG A+EKS+LIDATKHH+LTAAHPSGLSA+RGFF CR
Sbjct: 7 KTLMDFFQPA-KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVAD-DSSGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGEFHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQAMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQPNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLSANRGFFDCR 309
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG2_BACFR (Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=ung2 PE=3 SV=1)
HSP 1 Score: 239.965 bits (611), Expect = 2.268e-78
Identity = 112/199 (56.28%), Postives = 145/199 (72.86%), Query Frame = 1
Query: 235 VEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCR 831
+EE+W + E +K Y TL++FV SE S + ++PP LIFNA N PF +VK VI+GQDPYHGPGQA GL FSV +G+ P SLVNIFKE+ +D+G P GNL +WA QGVLLLNA LTVR HQA SH ++GWE+FTDA I+ ++++RE +VF+LWG+ A++K ID KH VL++AHPS LSA GFFG +
Sbjct: 5 IEESWKTHLEPEFEKDYFRTLTEFVRSEYSQYQ--IFPPGKLIFNAFNLCPFDKVKVVIIGQDPYHGPGQAHGLCFSVNDGVAFPPSLVNIFKEIKEDIGTPAPSTGNLTRWAEQGVLLLNATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEERENLVFILWGSYAQKKGAFIDRNKHLVLSSAHPSPLSAYNGFFGNK 201
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG2_BACFN (Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) OX=272559 GN=ung2 PE=3 SV=1)
HSP 1 Score: 239.965 bits (611), Expect = 2.268e-78
Identity = 112/199 (56.28%), Postives = 145/199 (72.86%), Query Frame = 1
Query: 235 VEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCR 831
+EE+W + E +K Y TL++FV SE S + ++PP LIFNA N PF +VK VI+GQDPYHGPGQA GL FSV +G+ P SLVNIFKE+ +D+G P GNL +WA QGVLLLNA LTVR HQA SH ++GWE+FTDA I+ ++++RE +VF+LWG+ A++K ID KH VL++AHPS LSA GFFG +
Sbjct: 5 IEESWKTHLEPEFEKDYFRTLTEFVRSEYSQYQ--IFPPGKLIFNAFNLCPFDKVKVVIIGQDPYHGPGQAHGLCFSVNDGVAFPPSLVNIFKEIKEDIGTPAPSTGNLTRWAEQGVLLLNATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEERENLVFILWGSYAQKKGAFIDRNKHLVLSSAHPSPLSAYNGFFGNK 201
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG_GEOTN (Uracil-DNA glycosylase OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=ung PE=3 SV=1)
HSP 1 Score: 239.58 bits (610), Expect = 3.873e-78
Identity = 116/200 (58.00%), Postives = 143/200 (71.50%), Query Frame = 1
Query: 232 LVEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCR 831
+++ W + E QKPY L L +F++ E + +YP + IFNAL+ TP+ VK V+LGQDPYHGPGQA GLSFSV G+ VP SLVNIFKELH DLGC IP +G L KWA QGVLLLN VLTVR+ QANSH KGWE FTD VI+ +++K + VVFLLWG +A+EK I +HH++ A HPS SA+RGFFG R
Sbjct: 3 ILKNDWAPLLEEEFQKPYYLKLREFLKEEYRTR--TIYPDMYDIFNALHYTPYANVKVVLLGQDPYHGPGQAHGLSFSVKPGVPVPPSLVNIFKELHDDLGCYIPDNGYLVKWAKQGVLLLNTVLTVRRGQANSHRGKGWEHFTDRVIELVNEKDDPVVFLLWGRNAQEKKERITNPRHHIIEAPHPSPFSAARGFFGHR 200
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG_BACV8 (Uracil-DNA glycosylase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154) OX=435590 GN=ung PE=3 SV=1)
HSP 1 Score: 238.039 bits (606), Expect = 1.151e-77
Identity = 111/199 (55.78%), Postives = 141/199 (70.85%), Query Frame = 1
Query: 235 VEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCR 831
+EE+W + E +K Y + L++FV SE + +YPP IFNA N PF +VK VI+GQDPYHGPGQA GL FSV +G+ P SL NIFKE+ DLG IP GNL +WA QGVLLLNA LTVR HQA SH ++GWE+FTDA I+ ++++RE +VF+LWG+ A++K ID KH VL +AHPS LSA GFFG +
Sbjct: 5 IEESWKQHLAPEFEKDYFIRLTEFVRSEYQT--ATIYPPGRFIFNAFNLCPFDKVKVVIIGQDPYHGPGQAHGLCFSVNDGVPFPPSLQNIFKEIQSDLGAPIPTSGNLTRWANQGVLLLNATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEQRENIVFILWGSYAQKKGAFIDRNKHLVLASAHPSPLSAYNGFFGNK 201
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG_CLOB8 (Uracil-DNA glycosylase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=ung PE=3 SV=1)
HSP 1 Score: 236.884 bits (603), Expect = 4.445e-77
Identity = 111/200 (55.50%), Postives = 146/200 (73.00%), Query Frame = 1
Query: 232 LVEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCR 831
+++ W + + E QK Y + L KF+ +E +S +YP + +FNAL+ TP+++VK VILGQDPYHGPGQA GLSFSV G+K P SL+NI+KELH DLGC IP +G L+KWA QGVLLLN VLTVR +ANSH KGWE+FT+ VIK +++K +VF+LWGN+A K+ I KH ++ + HPS LSASRGFFG +
Sbjct: 4 ILKNDWKNYLQSEFQKDYYINLRKFLINEYNS--KTIYPNMYDLFNALHFTPYNKVKVVILGQDPYHGPGQAHGLSFSVNPGVKTPPSLINIYKELHTDLGCYIPNNGYLRKWADQGVLLLNTVLTVRAGEANSHKNKGWEEFTNEVIKVLNKKETPIVFILWGNNAISKTDFITNPKHLIIKSVHPSPLSASRGFFGSK 201
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG_AZOVD (Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=ung PE=3 SV=1)
HSP 1 Score: 236.498 bits (602), Expect = 5.963e-77
Identity = 116/201 (57.71%), Postives = 147/201 (73.13%), Query Frame = 1
Query: 223 EELLVEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFG 825
+ + +E +W +A+ E +KPY LS F+ E ++ ++ YPP LIFNAL+STP +VK VI+GQDPYHGPGQA GL FSV G+ VP SL NIFKEL +DL IP HG+LQ+WA QGVLLLN LTV + A SHA GW++FTD VI+ +SQ+RE VVF+LWG+ A+ K RLID++KH VL +AHPS LSA RGF G
Sbjct: 6 DRVRLEASWKEALHDEFEKPYMQELSDFLRREKAAGKEI-YPPGSLIFNALDSTPLDQVKVVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIFKELKRDLNIDIPKHGHLQRWAEQGVLLLNTSLTVERGNAGSHAGMGWQRFTDRVIEVVSQRREHVVFMLWGSHAQSKRRLIDSSKHLVLCSAHPSPLSAHRGFIG 205
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG_GEOKA (Uracil-DNA glycosylase OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=ung PE=3 SV=1)
HSP 1 Score: 235.728 bits (600), Expect = 1.395e-76
Identity = 115/200 (57.50%), Postives = 141/200 (70.50%), Query Frame = 1
Query: 232 LVEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCR 831
+++ W + E QKPY L L +F++ E + +YP H IFNAL+ TP+ VK V+LGQDPYHGPGQA GLSFSV G+ VP SL NIFKELH DLGC IP +G L KWA QGVLLLN VLTVR+ QANSH KGWE FTD VI+ +++K + VVFLLWG +A+EK I +H ++ A HPS SA+RGFFG R
Sbjct: 3 ILKNDWAPLLEEEFQKPYYLKLREFLKEEYRTR--TIYPDMHDIFNALHYTPYANVKVVLLGQDPYHGPGQAHGLSFSVKPGVPVPPSLANIFKELHDDLGCYIPDNGYLVKWAEQGVLLLNTVLTVRRGQANSHRGKGWEYFTDRVIELVNEKDDPVVFLLWGRNAQEKKERITNPRHLIIEAPHPSPFSAARGFFGHR 200
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG_CAMC5 (Uracil-DNA glycosylase OS=Campylobacter curvus (strain 525.92) OX=360105 GN=ung PE=3 SV=1)
HSP 1 Score: 235.343 bits (599), Expect = 1.678e-76
Identity = 120/207 (57.97%), Postives = 146/207 (70.53%), Query Frame = 1
Query: 214 VKLEELLVEETWLDAIPGELQKPYALTLSKFVESEISS-HDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCR 831
V LE++ +E +W +A+ GE +L E I + +VYPP++LIFNA N TPF VK VILGQDPYHGP QAMGLSFSVP G+++P SLVNI+KE++ DLG P G+L WA QGVLLLNA LTV + ANSH+ GW+ FTDAVIK +S++RE +VFLLWGN A+ K LID KH VLTAAHPS L A FFGCR
Sbjct: 3 VNLEDVKIEPSWKEALKGEF---LSLYFGDIKEKLICAKRAGIVYPPSNLIFNAFNLTPFDTVKVVILGQDPYHGPNQAMGLSFSVPNGVRIPPSLVNIYKEIYDDLGIREPNSGDLTYWAKQGVLLLNASLTVGANMANSHSGFGWQIFTDAVIKILSRERENIVFLLWGNPAKAKIPLIDTNKHLVLTAAHPSPL-ARGAFFGCR 205
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Match:
UNG_PSEPK (Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) OX=160488 GN=ung PE=3 SV=1)
HSP 1 Score: 235.343 bits (599), Expect = 1.852e-76
Identity = 115/202 (56.93%), Postives = 141/202 (69.80%), Query Frame = 1
Query: 223 EELLVEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGC 828
+ + +E +W A+ GE +PY L +F+ E ++ ++ YPP LIFNALNSTP +VK VILGQDPYHGPGQA GL FSV G+ P SLVNI+KEL +DL IP HG LQ WA QGVLLLN +TV + A SHAKKGWE FTD +I+ +S++ VVFLLWG A+ K +LID TKH VL + HPS LSA RGF GC
Sbjct: 5 DRIKLEPSWKAALRGEFDQPYMHQLREFLRGEYAAGKEI-YPPGPLIFNALNSTPLDQVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQGVLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLIDGTKHLVLKSVHPSPLSAYRGFIGC 205
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan08g186500 vs. DB:Swiss
Analysis Date: 2020-05-21 (
BLAST: V. angularis Jingnong 6 genome v1.1 )
Total hits: 10
200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 Expect = 1.01e-133 / Id = 64.59 Expect = 2.27e-78 / Id = 56.28 Expect = 2.27e-78 / Id = 56.28 Expect = 3.87e-78 / Id = 58.00 Expect = 1.15e-77 / Id = 55.78 Expect = 4.45e-77 / Id = 55.50 Expect = 5.96e-77 / Id = 57.71 Expect = 1.40e-76 / Id = 57.50 Expect = 1.68e-76 / Id = 57.97 Expect = 1.85e-76 / Id = 56.93 Sequence UNG_ARATH UNG2_BACFR UNG2_BACFN UNG_GEOTN UNG_BACV8 UNG_CLOB8 UNG_AZOVD UNG_GEOKA UNG_CAMC5 UNG_PSEPK
Match Name E-value Identity Description
UNG_ARATH 1.009e-133 64.59 Uracil-DNA glycosylase, mitochondrial OS=Arabidops... [more] UNG2_BACFR 2.268e-78 56.28 Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (... [more] UNG2_BACFN 2.268e-78 56.28 Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (... [more] UNG_GEOTN 3.873e-78 58.00 Uracil-DNA glycosylase OS=Geobacillus thermodenitr... [more] UNG_BACV8 1.151e-77 55.78 Uracil-DNA glycosylase OS=Bacteroides vulgatus (st... [more] UNG_CLOB8 4.445e-77 55.50 Uracil-DNA glycosylase OS=Clostridium beijerinckii... [more] UNG_AZOVD 5.963e-77 57.71 Uracil-DNA glycosylase OS=Azotobacter vinelandii (... [more] UNG_GEOKA 1.395e-76 57.50 Uracil-DNA glycosylase OS=Geobacillus kaustophilus... [more] UNG_CAMC5 1.678e-76 57.97 Uracil-DNA glycosylase OS=Campylobacter curvus (st... [more] UNG_PSEPK 1.852e-76 56.93 Uracil-DNA glycosylase OS=Pseudomonas putida (stra... [more]
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g186500; organism=Vigna angularis; type=mRNA; length=2799bp back to top protein sequence of LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1
>LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=277bp back to top mRNA from alignment at Chr_8-CM003378.1:28385237..28388035+
Legend: polypeptide start_codon exon CDS intron stop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g186500; organism=Vigna angularis; type=mRNA; length=2799bp; location=Sequence derived from: Chr_8-CM003378.1:28385237..28388035+ (Vigna angularisATG GCTTCCAGAACCCTAACGGACTTTTTCCAACCCGCTTCGAAGCGCTT
GAAGCCCTCGCTCCCCCAATCCTGCAAATCCGGTGACGCCAACGCCTCCA
CCCTCTCTGTTGACCAGAACTTGCGCGTGGAATACAACAAGCTCCTCGCC
AAGTCCAAACGGAATCTCAAACTCTGCGTCGAGAGGGTCTCCAAGACCAA
AGGTAACTTCTCTCGTTTTGGAAATGCACTCCCGTTTGTGATGGTTTAAA
ACGCAGCGTTTTTGTGATGGTTCGTAG GTCTAAGTGGCGTGAAGCTGGAG
GAGTTGCTGGTGGAGGAAACATGGTTGGACGCTATCCCTGGTGAACTTCA
GAAACCTTATGCACTGACTCTCTCGAAGTTCGTGGAAAGTGAGATTTCAA
GCCACGATGACGTCGTATACCCTCCCACGCACTTGATTTTCAACGCCCTT
AATTCTACCCCTTTTCATAGAGTCAAAGCTGTCATCCTTGGCCAG GTTCT
TCCATTTTTGTGTggttttctttcattatatgTCGCGTTTGATGTTGTTT
CGACAAATTTGTTGGTATTCTCcagaaaagaaaaccaaaattaaaaacac
aatactttttccataaatttaaaataaagttatacacatatttggatttt
tttttcttcagtttcaataatttttaagtaaaatatttttacaaaatatg
tttGAGTTTTGGGCTGAAATTTAGtaagaaactataaaaaaagttcttta
tttatttattactgcATCCAAGCAAAACGAATTATAATTCAATGtttgtt
ataattgattatgaaaatAGTGTAATTTTCGTCTATGTTCCAAGTGCTTC
CTTAGCTTAAGTAGAAGCTCCCTAACGAGTTATTACAGTGCGGCATGGCC
GCAATTGTTGTCAAGTTACCTGTACTTTTTCTCAGATTCCTGCAGTTTCA
AAAACATGACAAAACTGCGCTTGCATCCTCAACTGCAATATCAAACTTGA
TCTTTAAATGCTGAAGCgcataaattgattttaaactAATAGAAGAAGtt
agatttgttttttttttctctcttttaagtAATTTTGTTGAACTTTATCC
AAGGAGCCCAGATTGTCTCTCTTTTAGTGATTTGtgggtttttttattta
atgtttag gACCCTTATCATGGACCTGGTCAAGCAATGGGGCTCTCATTC
TCAGTTCCTGAGGGAATTAAAGTCCCTTCCAGTTTGGTGAATATATTCAA
GGAGCTTCACCAAGACCTTGGTTGCACCATTCCACCCCATGGAAATCTTC
AAAAATGGGCTGTGCAG GTACGTTCTCCTGCATGCATCTGAGTTATGTGA
GGGATTTGTCTTTTTTCAAACATTGCAATGGTACTTTCAAGTGGATCGAT
TTCAATTTTATCCACTTCGTATTTACATCCATGCACTGAACCTATTGTAT
TTCTTGCTAGTGTCTGCCTAACTAGTACTCCCTGtatagttttttaaaag
aatagtGATCGATgtatattcattatttatggATGAATGCTTGATAACTA
TTATCAAATGTAAAGTACATAGTAATTGTCATGCGTGATGAAGCTTAGCC
TTTCTCGTCTTTTGATAGTTCTTTCTGCGTTAGGTCATCTCCAATGATAT
GTTTAGTGTGGGTAAGAACAAAATTGTGAGGTATAATGGATCAAATTTTT
CGTATAACTTGACATCAGTATATGTACTTCggttttttttatagaaattc
tCGCATCTAAATTTTCTAAGAGCTAAAATccataaattgattttaactaA
TGGGAgaagtttgtttcattttatctctttatttCTTCTATAATAAGAAC
TTTTACAAAACTTTATCCAAATTAAGGCAGTATATTTAATGGATAAGGCC
TCTTAAACGTTTCCTTCAAATGTTTTGTATGATTTGAAGATAAACTATAT
GTCAATAAATAAAGTCCCGCCTTAAAAAGGGTGCCCGTTAAATACAAATA
TGGATTGTTGTAGAAGTTTGACGAGTTTGTGCTATGAAAGCCAAGTTATA
TGAGTGTAGTTATATTAACATAATGTGTGACTACGTTCTGTGAGAGTAGT
TTTTGAAATACTATATCTGATCATTTGAACTTTATTTCAG GGTGTTCTCT
TGCTCAATGCTGTTCTCACAG GTTAGACCTTTAGTTTTTGTTGACTTCTA
ATCAAGTATGTCGATgacttattattttatccttgtATTGTAGTGGTGTG
TCTTACTAGTATTGAACTTTTGATTTCAG TCAGGAAGCATCAAGCAAATT
CTCATGCCAAAAAAGGCTGGGAACAATTTACTGATGCTGTTATCAAGACA
ATCTCACAGAAGAGGGAGGGAGTTGTGTTTTTGTTGTGGGGAAATTCTGC
TCGGGAGAAATCCAG GTACTACAACTGTGTAACACTATAGCAAGTCTTTG
GAACAAACCAGCAAAGAGTGAGCAGGGCTTTCAATAGTTTCCTTGACAAA
TTTTCCAAATTCTGCATAAAAAACTAGATATCggagtaaatttttatttt
tgagataTGGATGATCAAGTTGCTGCAACTGTGCATTTATTAACTGCTGG
CTGCTTTTTggaatttgttttcttaaactAAATTGGATGCTTTTCTTTCC
TTGCCTGGAAAATAAATTCGGTGAAAACTAGTTGATGAACTTGTGATTGT
CATATTCTCAG GTTAATCGATGCAACAAAGCATCACGTTCTTACAGCTGC
ACATCCTTCTGGTTTGTCTGCAAGTAGAGGCTTCTTTGGCTGCAGGTAA back to top Coding sequence (CDS) from alignment at Chr_8-CM003378.1:28385237..28388035+
>LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g186500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g186500; organism=Vigna angularis; type=CDS; length=834bp; location=Sequence derived from: Chr_8-CM003378.1:28385237..28388035+ (Vigna angularis back to top
