LR48_mrnaVigan08g187800

Transcript Overview


Name	LR48_mrnaVigan08g187800
Unique Name	LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	10528
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_8-CM003378.1	supercontig	Chr_8-CM003378.1:28495200..28505727 +	Vigna angularis Jingnong 6 genome v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis Jingnong 6 genome v1.1	2020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.1	2020-05-21
BLAST: V. angularis Jingnong 6 genome v1.1	2020-05-21

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ascaR139	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
asasR097	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasL0301	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL1143	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL1201	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ascaiR188	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ascaiR199	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
asccR0222	Cajanus cajan Asha genome v1.0	Cajanus cajan
ascrR157	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
aspsR145	Pisum sativum Cameor genome v1a	Pisum sativum
aspsR152	Pisum sativum Cameor genome v1a	Pisum sativum
aspsR158	Pisum sativum Cameor genome v1a	Pisum sativum
aspvR130	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
asvuR093	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
asvuR115	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
astifR133	Vicia faba cv. Tiffany genome v1.0	Vicia faba
astifR162	Vicia faba cv. Tiffany genome v1.0	Vicia faba
asvfhR135	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvfhR163	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvrvR099	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
asvssR149	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR151	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvuaR086	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
asvuaR108	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ascanR124	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
Vfaba.Tiffany.R1.6g053960.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
rna-XM_027335771.1	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
jg30734.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-XM_014638266.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Phvul.011G031000.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
evm.model.Chr11.1755	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
rna-KK1_022010	Cajanus cajan Asha genome v1.0	Cajanus cajan
Cr_16572.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Ca_11079	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Vigun11g192300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vfaba.Hedin2.R1.6g065120.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LR48_Vigan08g187800	gene-LR48_Vigan08g187800_Va_Jingnong6_v1.1	Vigna angularis	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan08g187800	LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1-protein	Vigna angularis	polypeptide
LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1	LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1	Vigna angularis	polypeptide

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1-start_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28495200..28495202	LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1-start_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28495200..28495202	Vigna angularis	start_codon

The following exon feature(s) are a part of this mRNA:

The following intron feature(s) are a part of this mRNA:

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS7178	CDS7178_Va_Jingnong6_v1.1	Vigna angularis	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1-stop_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28505725..28505727	LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1-stop_codon-Chr_8-CM003378.1_Va_Jingnong6_v1.1-1589992784:28505725..28505727	Vigna angularis	stop_codon

Homology

[Close]

BLAST of LR48_mrnaVigan08g187800 vs. DB:Swiss
Match: TF3C3_HUMAN (General transcription factor 3C polypeptide 3 OS=Homo sapiens OX=9606 GN=GTF3C3 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.133e-28
Identity = 82/308 (26.62%), Postives = 153/308 (49.68%), Query Frame = 1

Query: 1642 DWLSDDSDDEPQIENREPPLCILRKY---EEHHQLIIDLCKALASLQRYWEALEIINLSLRLAGTSLSTDKKEELRSLGAQMAYSTTDPKHGFDCVKYIVQQHPHSVAAWNCYYKVISRLENRDTRHYKFVRVIQGKFVDCVPPILISGHQFTIFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCLVQGLAFLYNNLRICENSQESLYNIARAYHHVGLVTLAAVYYEKVIGIREKDCPIPKLPNENPDVIENHKPGYCDLRREAAYNLHLIYKKSGALDLARQVLKDHCTL 2556
            D +SD +D E    + +    +L      ++   L++    +L  L R+ EA  +++ SL          K++EL   G   A    + +  ++ ++ +V ++ +    WN + +V   + ++D RH++F   +  K  +     +++GH   +    + A  +Y++A++  P+ PL + C+G   I++A    +  +H  +VQG +FL   L +    QES YN+ R  H +GL+ LA  YY+K +          +LP   P V+E  +    DLRR+ AYNL LIY+ SG   +A+ +L  +C++
Sbjct:  594 DKISDSNDQESANCDAKAIFAVLTSVLTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAYNYIRIMVMENVNKPQLWNIFNQVT--MHSQDVRHHRFCLRLMLKNPENHALCVLNGHNAFVSGSFKHALGQYVQAFRTHPDEPLYSFCIGLTFIHMASQKYVLRRHALIVQGFSFLNRYLSLRGPCQESFYNLGRGLHQLGLIHLAIHYYQKAL----------ELP---PLVVEGIELDQLDLRRDIAYNLSLIYQSSGNTGMAQTLLYTYCSI 886

HSP 2 Score: 57.7658 bits (138), Expect = 3.837e-7
Identity = 59/271 (21.77%), Postives = 118/271 (43.54%), Query Frame = 1

Query:  562 LYVELGDYQKAAVTYEQVHQLCYEN-----VEPLKEAAKLYKKCGQVEHAVCILEDYLKSQLDGANASVVDLLCTILMETKAHDRALQYI---------KHAQAANAWEE--------------LPLNLKIKAGICHAHLGKMDMAQVLFNDLKPENASKHVDLVIEVADSLMGLEHYNPALNYYLMLEGNIGNENRNNTLLLLPDDCSAVKYSYSLVAKQDFVSALEILQDDVDARITLASLLLEEGKEDEAISLLSPPNDSDS--GDAN 1284
            LY ++GD++ A   Y ++  L   +     ++  ++ AK Y +   V  A+ I+++         +   V++   + +  K +D+AL+ I         K        EE              +P+++ +K  +C  HL  ++    L   L  +N     DL ++VA++ + +  YN AL    +L   + +E  N  ++ L          Y   A + +   +++    +DARI+L++L  + G+ ++A+  L P  D D+   DAN
Sbjct:  260 LYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINIIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENKAPENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALP---LLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDAN 527

[Close]

BLAST of LR48_mrnaVigan08g187800 vs. DB:Swiss
Match: SFC4_SCHPO (Transcription factor tau subunit sfc4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sfc4 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.296e-14
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 1

Query: 2065 ILISGHQFTIFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCLVQGLAFLYN--NLRICEN---SQESLYNIARAYHHVGLVTLAAVYYEKVIGIREKDCPIPKLPNENPDVIENHKPGYCDLRREAAYNLHLIYKKSGALDLARQV 2535
            +L+ GH          A   Y  A+ + P+ P+ NL +G A ++ A+     N+H  ++QG  FLY   +LR+ E     QE+LYN+ +AYH +GL   A  YYE V+G+       P    +     E+      D   EAAYNL LIY  SG + LA Q+
Sbjct:  844 VLLYGHIMARNRSWIPAINYYSRAFAINPDCPITNLSLGLAYLHRAMQRLSDNRHYQILQGFTFLYRYYDLRVNEGLGEKQEALYNLGKAYHFIGLEHYAVKYYEAVLGLS------PMSQGDKMTSSESTVSTTYDFGFEAAYNLRLIYICSGNIKLAFQI 999

[Close]

BLAST of LR48_mrnaVigan08g187800 vs. DB:Swiss
Match: TFC4_YEAST (Transcription factor tau 131 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TFC4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.362e-10
Identity = 42/143 (29.37%), Postives = 78/143 (54.55%), Query Frame = 1

Query: 2146 LPENPLVNLCVGTALINLALGFRLQNKHQCLVQGLAFLYNNLRICEN------SQESLYNIARAYHHVGLVTLAAVYYEKVIGIREKDCPIPKLPNENPDVIENHKPGYCDLRREAAYNLHLIYKKSGALDLARQVLKDHCTL 2556
            +P++P+VNL +G + I+ A+      +H  +  GL +LY   +I ++       QE+ YN+ RA+H +GLV++A  YY +                    V+EN+  G   L++ AAYN  +IY++SG ++LA  +++ + ++
Sbjct:  905 IPDDPMVNLLMGLSHIHRAMQRLTAQRHFQIFHGLRYLYRYHKIRKSLYTDLEKQEADYNLGRAFHLIGLVSIAIEYYNR--------------------VLENYDDG--KLKKHAAYNSIIIYQQSGNVELADHLMEKYLSI 1025

The following BLAST results are available for this feature:

BLAST of LR48_mrnaVigan08g187800 vs. DB:Swiss

BLAST of LR48_mrnaVigan08g187800 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 3


Match Name	E-value	Identity	Description
TF3C3_HUMAN	3.133e-28	26.62	General transcription factor 3C polypeptide 3 OS=H...	[more]
SFC4_SCHPO	1.296e-14	34.57	Transcription factor tau subunit sfc4 OS=Schizosac...	[more]
TFC4_YEAST	1.362e-10	29.37	Transcription factor tau 131 kDa subunit OS=Saccha...	[more]

InterPro

Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 19..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..141
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 177..212 e-value: 44.0 score: 9.3 coord: 143..176 e-value: 20.0 score: 12.2 coord: 764..797 e-value: 14.0 score: 13.6 coord: 577..610 e-value: 390.0 score: 1.0
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 765..797 e-value: 0.048 score: 13.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 134..458 e-value: 9.1E-24 score: 86.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 575..851 e-value: 4.7E-12 score: 47.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 149..416
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 693..847
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 764..797 score: 6.802
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 143..246 score: 12.158

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_8-CM003378.1:28495200..28505727+
coding sequence from alignment at Chr_8-CM003378.1:28495200..28505727+

mRNA sequence

>LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g187800; organism=Vigna angularis; type=mRNA; length=10528bp
ATGGCAAAAGAGGGAAGCGACTTTGATGAAGTAAACGACGCGGTGGATGG
CACGggggaggaagaggaagagcaAGCAGCGGAGGAAGAGGACAATGACA
TGGAAGAAGAGAATGAGTATACTTTCAGGTTCGAAAACGGGATGAATCCT
TTGGACTTTGTCGATAACAATGACGATTCTGGCCTTCAACCCTACGAGCG
ATTCGAGCGTCTTGAACAGCAAGCTCTTGCCGATAAAAAACGAAAAGCAA
CTGAACAATGCCACAGGTCCGTTGGCTTCTTTAGCCCTAATTAATTGGGA
CGGTTAATACCATTAGTAGTGAAATTTGAGGCTTAGATATAAGAGTCCTC
AAGATTctattataaagataagatgaaattataatatataaaaggaGCAA
ACTTATATAAATCGAGCCACTCTCTTCTTAATACATTAATACATATGAGA
GACTAATATGTATGGTAAACTTAAACCATTTACTAATAGACTTATTTATT
TCCagataattgttttatttgttgtattaACTGCATTTGTGGTTGGACTT
TCGAAATTGGTAGTTTCTGTTTTTTTTGTTGTCGTTGCTGTGAAGTGTAC
TGTTTATACTTGAATCTGTGCTTTAGGAGTCGATGCAACTTTGTATTGTT
AATATATTGATTCAGAGATGTGCATGTGCAACCGAGAGTGCCACAATTAC
GTACATGTTGAATAGAAATGGGAATATGTTAGTTGtgaaacttaattttt
attgacAGCAAAGGAAAATGTTGTAGATACAAGAAATTAGAGAAAAAGTA
TTGgaggttaaaaattaaaataaaaaacagaaaatccTTGAATCCCTTGT
TCAATGAGATGAGCTactgataattcttgattgagtTCAGGTGCTAAAAG
GGTTGAACAAATTCTAAATGTATCACACAAGGATAAAATAACTCACTGCG
CTTActtactttttttatgtttgtttgatCCATGCTATTTTATGTCACTA
AATGCAGTGAAGGGCCTCCTTCTAAGATGGCTAGGGAAAGTGATATTTCC
GGGTCAAAGATAGCTGAGATAATGGAAGCAATGAATTATCATGGTGTGCG
CAAGAGATCAAGAAAGGTATGCCATGCAGTGCATATGCCAGTTTAGCCTA
CATAATAGCTTTcctttaattcttttatattataagcAGTTTGCCAGTCA
TGAGCAAAGGCTACACCAGAAAGAAGTTGATAACtttcctttaattattt
tatattataaggtAGATTACAAGTTTTGATCTCCAGCAATAGAGTGGATA
TTAGAAGAATACGTTTGGTGTTATGATTTTGGAAGAAAATTTAAGATCTG
TGGTCATGCCTGTTGCATTTTTTGCTCATAGCTGTTTCCATTTTTTATAT
GCAGGTTACATTAGTTTCATTCTTACAATTTCCCCCTCTCTTTTCCCTGA
ATTTTCTGTTCTACATGATAGCTTATCACTAGTTTAATTGTATACCATTT
TCTTCATATGCTTATGATTCTTTATTTCTTATACATATAATATCCATAAC
CTAGAACAGATGTAGATGAAAATGTGAAAATGTAAGCACTCAGTTGCAAG
TTATGTGACTACcttctgttttaaattttaatgtaaccTACATGACCCTT
TTAAGTATTCTCTATCTGTCTGATGCAGCCTAAAAAGAGAGGCAGGCGAA
AAGGATCGAAGAATAAAATGGACCCTAAGCTAGAACGGATGCTGGGTGAT
GCCAATCTTCACTATTCACGTAAGCATTATGACGAGGTATATTATTCTGT
CACATGACTTCCTTAGCTTCTGTCACTGGagttttctattatttagtGTC
ACAGCTACCCAGTATGCTGAGGAAAAAAAGTAGATAAGTAAATCACTGTa
ctctattaatttatttttttaggatgGTTTTCTGTATTAAGTACCTAAAG
AGATACAATAAATGATACTATTTCTGTCTGTCTAGGCTCTTTTTGCCTTT
AGCATATAATCATCTGATGCAACCTGGGGTATTATGTATGCCTTTGTTTG
TTGGCATACCTTTTTTGGATCCCTTTTTCCTAATCAACCTTTGTTTCTCT
TGAagttttcctttgtttttttaattaagatttaagcAAATCCAAGTTGa
tcaaattaatgtttttacCCTCACTTATTTGTTATTGGGCTAATACTGTA
TGTCTTGCTTTTCAGAGAGATATGGTTGCCACCAGGAGAAACTCATTAGC
TGGAAGTTATATTCATGTTCCTGGAAATGCTCTAACACTTTCCATTTTTG
TTTGTCTCAACTATGATAGATGGCATAGTTGAGACAAATAGATATGATTG
ATTTATATTCTGggtgtttagtttttttattcttaattttttttgcatct
GTCAAAGCTTGATTTATGTTATAGATTTTATCATTGCTTTAGGCTTTTGC
AGATTATTTATGCATTCCTTTTCTCTGTTGTTTTTTTGCAGGCTAAAGAT
GTGCTGCTTGAAGTTATTAAGTTGGCACCGAATGTGGCTGATTCTTATCA
CACCCTTGGACTTGTCTGTAATTCACTCCAGGATGATAAAGGAGCAATGA
CTTTTTACCTAATTGCTGCTCTTTTGAATCCTACTAAATATTCATCTCTT
TGGGAAATGATTTTTAGTTGGTCCATGTGAGATGACTTCTTAGTTTTgtt
gtttctgttatttttgtGAAGTTATTCTTTTGGAATAATTTGGCTACATG
AATCTATACACCTACCTCAATTGTGATGATGGTTAAAATTTCATCTAGTA
ATGTCCTTGAAATATTATGCATGTATTACTTTCAAACAATGttgaaagaa
atattatgattattgaATTGTGAAACTTTTTCAAGTGCAGAAAACAAGGT
CATAAAGATCAAGCACGATATTGTCTTTTAAAAGCAATAACAGCAGATCC
CAAAAATATTACTCTTAGACGTGATCTTGTAGGGCTTTATGTTGAACTTG
GAGACTATCAAAAAGCTGCTGTTACATATGAGCAAGTACATCAACTCTGT
TATGAGAATGTTGAACCACTGAAAGAAGCAGCTAAGGTTAGTCTTTGCTT
TGAGATACCATGGACATGGATTCAATTTTGTCAATAATCCTTTgcaattt
gtttttttgttaacgATTATTTCCAATGGAAATCACGGTTTGCCTTGTGA
TGCTTTATTAATGCATTTATCGCATATGCTTGTATGTTATATGAGTAACT
AACATCTTTGAAATGGTAAACAGATGTGTATAAAATGTAATGTTGGAGAG
GggtaaactttaaattattttatatacatgCAAAAAGTATAGGGTTGGGA
gctgataatatttttattctcttacacattaataaattgattttcaatgt
cAAACTGAATTTATATTGCTTTCTATCAGTTGTACAAAAAATGTGGTCAA
GTTGAGCATGCTGTTTGTATTCTTGAAGACTATCTTAAGAGTCAACTGGA
CGGAGCAAATGCGAGTGTAGTTGATCTGCTGTGTACCATATTGATGGAAA
CTAAGGCACATGACAGAGCTTTGCAGTATATTAAACATGCCCAAGCTGCA
AATGCATGGGAAGAATTACcgttgaatttgaaaattaaggCTGGAATTTG
CCATGCTCATCTTGGAAAAATGGATATGGCTCAGGTGTGACTCATGCTTA
CTTATAATTGAATTTAGTGTGTTTTTCTTGATCATGGACCCTTTTAATCT
TGCTTGAACCTCATATATTAGGTTAGGTTAATTGATATTCTTTCGTGTCT
TTGGATGAGTATTTAGTTTAGACTTTCTTAGTTATCttgatttttttctc
tttcattctatatgttctttctttcttgtgtcCTGACCAATTTATGTGTA
ACACACATTGTTACCTATCCACCATAATTTTCCCTCCATGTAATATATCC
CTTATGAAGCATGGGTTTTGAATGAGATTTGCACGTAATGTTTTGCTGAT
TTCCTATTTTATGTAGATTttgttctctcttctttttattcTAAATAAGA
AAACTTAACTTTATGGTCATCTTGTATATAATGTTTTTTCCTTATAAAAT
GGCTtcttttcttaagaaaaaagattaatttcatAGTCTTTGTAATCGTG
TacaactctctttcttctccaaCCCCATTTTTGAAGCacattatatcatt
atttttgaGTTACTTTTTCCATGTTTCTCATTAACTTAATTGCATACAAT
GTTGGAGTGCAAGAAAATGTCTAATAATACATGTAATGACAGTGTATGAA
TCTTTCTTTTGACTTTGGTTTCATTTTTATGTATTACTTAACATTTCATT
TGATTACTAGGTTCTCTTCAATGATTTGAAACCAGAGAATGCAAGCAAGC
ATGTTGACTTGGTTATTGAGGTTGCTGATTCATTAATGGGTCTTGAACAT
TATAACCCTGCATTGAATTACTATTTGATGTTGGAAGGAAATATTGGAAA
CGAAAATGTATGGTAACTCCTGCCCATGCATGCCAATTATTGGTTTAATT
TTATACCAGTAATTTGCTTAATTAGGTGACTGTTTTTGTCTTATAATCTG
ATGGGGCTGTATATATTGgaatctttaaatttattgtccatatttttgtt
agaaatataatataaaaccaTTCTTGTGTCTTTACATAATAACTCAAGCT
TTTAGGGCTGTTGTTTGTTCCATGACTGAGTGGTCTAGAGTTTGATCCTT
ATTGACCTATCCAGTAGGCACAATTACAAGAGATGGGTATGATAAAACAT
GGACATGAACACAGGAATGcaaccaattttaaaaatattggatAACacat
ctataatttttaaattataaaagagaaTTCATGTTTCAAAAATGAGCACA
AGTTATTATGAACActaaaaaatgcaaaaaatgaTCTGATTATTGTGCTA
TCTAATCAGTATTGTTATTGACTACTTGAGTTTTTCTAATACATTTCCTC
ATGCCCAATGTTATTGGGTTTGTTGTTTGAGTAATAATAGTGTTTCTTTC
TGTACCCAATAGATTTCTTGAGCCACCTCCCATTCACTTTGGACGtattt
tgaagtaaaaatgTACATTGGGAAAATCGATTGTATTCTGTTATAAAAAC
CCATTCCCGAAGGAATGGGGTGGCTCAAAAAAATTGTGTGCAGGAAGAAA
CACTTTTATGGAGGTGATTAGTTAATAGATCAAACTAtaacaactttaat
tttaatatggaTTATacattatgttaaatatattgcgttttatgttaatt
agagAAACACAAACTTTTGCTATTACTTGATATTGGTACATATTGTTCAT
ATTGTTTTTAACAACATCTTCTATTTTCCATATTTATATTTGGTTGTCAT
ATATACTTGTATCATTCTTCATTATACATATATTACTCTATGTGTGTTTT
AGACATAAGGGAGATTAATTCTATATctagttttactatattcaataaat
ataagaCCTTCATATGATTTATGTTTGGAGCTAATTAAACCCCGTGAACT
AGCTTGAAAGGGCCCCAACAAAGTGGCTTTTGAGCTTGAGAGTTGTCTCC
CACTTATGTACTCTTCTTAGTTTCTATGTTTTGATGTGAGACTACTTGGG
ATTTTTTCCTGAAGCTAGTTGGAAGGACATAATAGAGGGACTGTATTGTC
TATTTGTATCTAGTATCAAATGTAATTGTTTACTGTTTtcaatttattct
attttctttggCTCTTTTCGGTTGCCTGatactatttattttagtttaga
aatatatttcagTGTATGCCTTTCGTCATCATCACTATGTTATCACGata
ttctatatttttactGGAATTATTTCTTGCAGGGTCCTCTATATCTGAAA
CTTGCTAAATGTTACAGGTCCTTGAAAGAAAGTTCACAAgcaattacttt
tttttacaaaggcaagattttatttttaaagagaatGTTATTTAGTTAAT
GATACCTTGTGAAAACCACTTCCCCtttgtttttcaatataaatgaaATG
TTCTATCGATCATTTCTTTTTGTGATGAAGCttctgaaattattttttat
tgccAAAATCTTTTAGTTTGGGTCCATCCTTTTTTCTTGCGGGAGTAGGA
TTTCACTTTAACATCATAGAATCAAGCAGTTCTCAAATGTATTCTTGGAT
TGCTTTACTTTTGAGTAAACTTTTTATGCATAACGTAACTGAAGATCTAA
TAGTATGCATTCTTCACATATAGATCAATAGACAGGTTTACATTTTTCAA
GTAATCTGATATGTGAGCTTTCCCATTAGCTTCTTCATTCAAAGACAGTT
ACATTGTTTTGGAATGAACTTTCTGTAgttttttctttgatattttGTGT
GCTTCTTTACTGTTGAGAAACATATAATTGCTGGTTTTCAGGTTTATTCG
TTTTGGAAGAAACAAGCTAAAATTTTGTGGcattaattttatgtaattgt
CTTGTGAGATTGGTGCATTCGTTGGAAATAATTACATCTTTAAGAGTGTC
TTTCACTCTATATTTGATTTGGAATAGGAATTTTTTTTGTAGCTTCTCTC
TACTGGTTTGCTCATGGATGTCACAATGAGTTTTTGTTTCAGGTTTTGCA
AAGAAATTAAACATGCTTCATTCTTGGTTTTAtcctttcacttttttttt
tgaggTTATCTTATCTGCTTCCCTTTATTCCActttttattatcttcttt
ttgtttatcaaaatactataattttaactattgaaTTATTGGTTAAGGGG
AGAAAAAGGGAAGTATGTCAAATTCAAAATGCTAATCGTTGTATCACTTC
ATAATTGACTTCAGTTATAAGAGCATATTTTAGGCTTGTATTGTTATGCT
AGTGCATGTAGATTCAGTGACAGAGAAACAATACTCTGTTGTTGCTTCCT
GATGATTGTTCTGCTGTGAAATATTCATACTCCCTGGTTGCTAAACAAGA
TTTTGTTTCAGCCCTTGAAATACTACAAGATGACGTTGATGCACGGATAA
CTCTAGCTTCCCTTCTGCTTGAAGAGGGAAAAGAAGATGAAGCAATTTCC
TTGTTGTCTCCTCCAAACGATTCTGGTATTTCCAACGTTTTCTTTCTCTA
CAGTTGAAGTTCTTGGATGGAGATTTTAATGTGAAAAACTTGCAGACTCT
GGTGATGCAAATCCTGAAAAGTCAAATAGATGGTGGGTTAATGGAAGGAT
AAAACTGAAGCTCTGCAACATTTATAGGAATAGAGGGACACTTGGTGATT
TTGTGGATACAATTTTCCCTTTGGTTCGTGAATCATTAGATGTTTCAACT
CTTCGACAGAAGGTAATATTTGAGAAGCCAAAATTTGACCCCTTTGGCAC
ACAGTCAAATACAGATTGATTGGTAGATGCTCTTGGACGCCTATGTGGGC
ATGCCTCTTGCTTGCTTCAGAATGTTAACATGTTGATAAACTACATTATT
TCAAGTAGAtcttaaaattgatttgaattttcaaaaggCGTTATTGCTGT
AGGGTAAATCAAAAAGGCGACTCACCAAAAGAGATCTGGTCGAAAGGGTT
AGGATGGTAGATGGTCCAGAAAATGATAATGTATTTCGAGGATTCAGGCC
AGTAGCTGCACCATCTGACCGGTAAGTGTTTGTGTCGTTTCCTAGTATAC
GTTAATCATATTCTAACTCAATTATGGGTGATCTATGGTTTGATTAACTA
ACCTCGGTTAACTAACCCGGTTAACTAATCTCGATTAACTAACCCCGGTT
AACTAACCCGGTTAACTAACTCCGGTTAATTAGCCACGATTAACTAGCTC
CAGTTAACTAGTCCTAGTTAACTAGCCTAAGTTAACTAACCCCGGTTAAC
TTGCCACAGTCAACTAGCCACAGTCAACTAGCCACAGTTAACTAGTCACG
ATTAACTAGCCACGGTTAACTAGCCAAAGGTTAACTAGCCACAATTAACT
AGCCACAAATAACTAACCACGGTTAACTAGTCACGGTTAACTATCCACGG
TTAAGTAGTCACGGTTCACTAGCCACGTTTAACTAACCCTAACCTTAACC
AACTAGTGATCTTACTCTTGTTTAATTGATGTGGGTCTTCATACTCAAAT
TTAATCATACCAATCTCCCTCTAAGTAGGTATTTGGAGTTGTGCAATGTT
GGGAAGCCATTTTTGTTATCGTCACCTTAAACCTTCTGAAATTCAAAGag
tattattagtattattatacctaaattttcattttttaaatattatgata
CTATGACTTCAAACATTTACTTCAATGTATCCTCTCCGTTATTATTCTAT
ATTTGGAAAACCATAGGATGGCATCCCCTTGGCAATATCTGTGTGATGCA
AATATAATACATGTATCTGTGCATTGGATGTACTACCTACATTGCagata
ttacaaaatattttgggTGAATAATTTGTCTTAGTGTTTATTCTTTTTCA
TGTTGTTGGCCATTGCTAGATTTGGATACAAAGTGAAAAGAATGTGTTTT
CTGTAATTAGGTTGAAAGCTTCCAGGGCAAAAAAGTTGCTGCAGAAGATG
GCAattgaaaaggagaaaagaaaagctgAGGCACTGGCCTCCGGAATTGA
TTGGCTAAGTGATGATTCAGATGATGAACCTCAGGTGATCCGTTTAGTGT
TGTCTACTCAATTCTAGAACAAATTTCTTGATGATTATGTCTTAACTCCC
TTTTGGGTTTATTGCATGAGATATTTTTAGATAGAAAACAGAGAACCTCC
CTTGTGCATTCTTCGGAAATATGAAGAACATCACCAGCTAATAATCGATG
TTAGTACTTCGATTAATTTTTTTGCTGCACCCCCTTTCCTCTGTTATATG
TCTGACACGTTAATATTATTGGACAGTTGTGCAAGGCATTAGCATCCTTG
CAAAGGTATTGGGAAGCACTGGAGATTATTAATCTCTCTCTAAGATTGGC
TGGTACATCTCTGTCTACTGACAAGAAAGAGGAACTTCGATCCCTTGGAG
CTCGTAAGTACTGAAGACAGGCTTTTGCTTATAGATTTATTCTTTGCTTT
CAAGTTCCAACTTTTCTCATTCgaagaaatcaaaataaaaattaaagaat
tcaCTGCTTGTTTAATGTTTATGTTTGTTTCTTTCCCTTCTTTAGCTTTA
CATATTTCCTTTATTACAACTCAGAATATAAatgttcttttttaaaaaaa
agaaaattaatgctTTTAGGGAGGGAAAAAGCTTATCTTGctgataaaac
aaatttatgttCTCCACAGAAATGGCATACAGCACCACGGATCCTAAACA
TGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCACACAGTGTTG
CAGCTTGGAATTGCTACTACAAGGTTATCTCAAGGTAATTTTGTGAATGC
ATGGAACCATGGGTTCTCGGCAAAATTGGTTAGGCTTTCTAATTTGTTGT
GATAGGTTTATGACCTAAAGATAAACAAAGACCTGTTTGTAAAACGTGGT
TTACATGTTCTCTCCTGGTTTATAGATTGGAAAACCGAGATACAAGACAT
TATAAATTTGTACGTGTTATACAAGGAAAGTTTGTGGACTGTGTGCCTCC
TATTCTAATTTCTGGCCATCAGTTTACCATATTTAGCCATCATCAAGATG
CAGCAAGGAAATACCTTGAAGCTTACAAACTATTGCCAGAGAATCCCTTG
GTTAATCTCTGCGTTGGTATGCTTTTCATGTCATGCTGTGTATGTACCGC
TTTCCTAACCAAGAACTAACAGTAATTGATGagttaattttatcaatttt
tctcaGGAACAGCCTTGATCAACTTAGCATTGGGTTTCAGACTTCAGAAC
AAGCATCAATGTCTTGTACAAGGTTTAGCATTCCTCTACAACAACTTGAG
AATCTGCGAGAACAGCCAGGTTTGTCTGCTGAGAATTTCCTGCAGTTTTT
TAGCCCATtaagaagaaaatgttttattaaatattaataataaatgcgac
aatatgaaaaaaaaaaatgggctCCTCTgagattataaattaaattacaa
aaaaaaaaatcttgaattCATTGAGTTCctataaatgaaaatacaaataa
gCATTGAACAAGCTGATGTAGGCGTTCAGGCACTGAACTTCATAAGATTG
ATTGTTGTCGTGAATTTCTTACGTTGTCATTTATTCAATGTGAGAACGAA
AAACCTTGCAGGAATCCTTATACAACATAGCTCGGGCCTATCATCATGTT
GGCCTTGTAACTCTGGCGGCTGTTTATTATGAGAAAGTGATTGGTATTCG
CGAGAAAGACTGTCCAATTCCAAAACTTCCCAATGAAAATCCAGATGTCA
TCGAAAATCATAAACCTGGTTACTGCGACCTTCGCAGAGAGGCAGCTTAC
AATTTACATTTAATCTACAAAAAAAGTGGCGCTCTTGATCTTGCTAGGCA
AGTTCTCAAAGATCACTGTACCTTGTGA

protein sequence of LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1

>LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=852bp
MAKEGSDFDEVNDAVDGTGEEEEEQAAEEEDNDMEEENEYTFRFENGMNP
LDFVDNNDDSGLQPYERFERLEQQALADKKRKATEQCHSEGPPSKMARES
DISGSKIAEIMEAMNYHGVRKRSRKPKKRGRRKGSKNKMDPKLERMLGDA
NLHYSRKHYDEAKDVLLEVIKLAPNVADSYHTLGLVWLYVELGDYQKAAV
TYEQVHQLCYENVEPLKEAAKLYKKCGQVEHAVCILEDYLKSQLDGANAS
VVDLLCTILMETKAHDRALQYIKHAQAANAWEELPLNLKIKAGICHAHLG
KMDMAQVLFNDLKPENASKHVDLVIEVADSLMGLEHYNPALNYYLMLEGN
IGNENRNNTLLLLPDDCSAVKYSYSLVAKQDFVSALEILQDDVDARITLA
SLLLEEGKEDEAISLLSPPNDSDSGDANPEKSNRWWVNGRIKLKLCNIYR
NRGTLGDFVDTIFPLVRESLDVSTLRQKGKSKRRLTKRDLVERVRMVDGP
ENDNVFRGFRPVAAPSDRLKASRAKKLLQKMAIEKEKRKAEALASGIDWL
SDDSDDEPQIENREPPLCILRKYEEHHQLIIDLCKALASLQRYWEALEII
NLSLRLAGTSLSTDKKEELRSLGAQMAYSTTDPKHGFDCVKYIVQQHPHS
VAAWNCYYKVISRLENRDTRHYKFVRVIQGKFVDCVPPILISGHQFTIFS
HHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCLVQGL
AFLYNNLRICENSQESLYNIARAYHHVGLVTLAAVYYEKVIGIREKDCPI
PKLPNENPDVIENHKPGYCDLRREAAYNLHLIYKKSGALDLARQVLKDHC
TL

mRNA from alignment at Chr_8-CM003378.1:28495200..28505727+

Legend: polypeptidestart_codonexonCDSintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g187800; organism=Vigna angularis; type=mRNA; length=10528bp; location=Sequence derived from: Chr_8-CM003378.1:28495200..28505727+ (Vigna angularis
ATGGCAAAAGAGGGAAGCGACTTTGATGAAGTAAACGACGCGGTGGATGG
CACGggggaggaagaggaagagcaAGCAGCGGAGGAAGAGGACAATGACA
TGGAAGAAGAGAATGAGTATACTTTCAGGTTCGAAAACGGGATGAATCCT
TTGGACTTTGTCGATAACAATGACGATTCTGGCCTTCAACCCTACGAGCG
ATTCGAGCGTCTTGAACAGCAAGCTCTTGCCGATAAAAAACGAAAAGCAA
CTGAACAATGCCACAGGTCCGTTGGCTTCTTTAGCCCTAATTAATTGGGA
CGGTTAATACCATTAGTAGTGAAATTTGAGGCTTAGATATAAGAGTCCTC
AAGATTctattataaagataagatgaaattataatatataaaaggaGCAA
ACTTATATAAATCGAGCCACTCTCTTCTTAATACATTAATACATATGAGA
GACTAATATGTATGGTAAACTTAAACCATTTACTAATAGACTTATTTATT
TCCagataattgttttatttgttgtattaACTGCATTTGTGGTTGGACTT
TCGAAATTGGTAGTTTCTGTTTTTTTTGTTGTCGTTGCTGTGAAGTGTAC
TGTTTATACTTGAATCTGTGCTTTAGGAGTCGATGCAACTTTGTATTGTT
AATATATTGATTCAGAGATGTGCATGTGCAACCGAGAGTGCCACAATTAC
GTACATGTTGAATAGAAATGGGAATATGTTAGTTGtgaaacttaattttt
attgacAGCAAAGGAAAATGTTGTAGATACAAGAAATTAGAGAAAAAGTA
TTGgaggttaaaaattaaaataaaaaacagaaaatccTTGAATCCCTTGT
TCAATGAGATGAGCTactgataattcttgattgagtTCAGGTGCTAAAAG
GGTTGAACAAATTCTAAATGTATCACACAAGGATAAAATAACTCACTGCG
CTTActtactttttttatgtttgtttgatCCATGCTATTTTATGTCACTA
AATGCAGTGAAGGGCCTCCTTCTAAGATGGCTAGGGAAAGTGATATTTCC
GGGTCAAAGATAGCTGAGATAATGGAAGCAATGAATTATCATGGTGTGCG
CAAGAGATCAAGAAAGGTATGCCATGCAGTGCATATGCCAGTTTAGCCTA
CATAATAGCTTTcctttaattcttttatattataagcAGTTTGCCAGTCA
TGAGCAAAGGCTACACCAGAAAGAAGTTGATAACtttcctttaattattt
tatattataaggtAGATTACAAGTTTTGATCTCCAGCAATAGAGTGGATA
TTAGAAGAATACGTTTGGTGTTATGATTTTGGAAGAAAATTTAAGATCTG
TGGTCATGCCTGTTGCATTTTTTGCTCATAGCTGTTTCCATTTTTTATAT
GCAGGTTACATTAGTTTCATTCTTACAATTTCCCCCTCTCTTTTCCCTGA
ATTTTCTGTTCTACATGATAGCTTATCACTAGTTTAATTGTATACCATTT
TCTTCATATGCTTATGATTCTTTATTTCTTATACATATAATATCCATAAC
CTAGAACAGATGTAGATGAAAATGTGAAAATGTAAGCACTCAGTTGCAAG
TTATGTGACTACcttctgttttaaattttaatgtaaccTACATGACCCTT
TTAAGTATTCTCTATCTGTCTGATGCAGCCTAAAAAGAGAGGCAGGCGAA
AAGGATCGAAGAATAAAATGGACCCTAAGCTAGAACGGATGCTGGGTGAT
GCCAATCTTCACTATTCACGTAAGCATTATGACGAGGTATATTATTCTGT
CACATGACTTCCTTAGCTTCTGTCACTGGagttttctattatttagtGTC
ACAGCTACCCAGTATGCTGAGGAAAAAAAGTAGATAAGTAAATCACTGTa
ctctattaatttatttttttaggatgGTTTTCTGTATTAAGTACCTAAAG
AGATACAATAAATGATACTATTTCTGTCTGTCTAGGCTCTTTTTGCCTTT
AGCATATAATCATCTGATGCAACCTGGGGTATTATGTATGCCTTTGTTTG
TTGGCATACCTTTTTTGGATCCCTTTTTCCTAATCAACCTTTGTTTCTCT
TGAagttttcctttgtttttttaattaagatttaagcAAATCCAAGTTGa
tcaaattaatgtttttacCCTCACTTATTTGTTATTGGGCTAATACTGTA
TGTCTTGCTTTTCAGAGAGATATGGTTGCCACCAGGAGAAACTCATTAGC
TGGAAGTTATATTCATGTTCCTGGAAATGCTCTAACACTTTCCATTTTTG
TTTGTCTCAACTATGATAGATGGCATAGTTGAGACAAATAGATATGATTG
ATTTATATTCTGggtgtttagtttttttattcttaattttttttgcatct
GTCAAAGCTTGATTTATGTTATAGATTTTATCATTGCTTTAGGCTTTTGC
AGATTATTTATGCATTCCTTTTCTCTGTTGTTTTTTTGCAGGCTAAAGAT
GTGCTGCTTGAAGTTATTAAGTTGGCACCGAATGTGGCTGATTCTTATCA
CACCCTTGGACTTGTCTGTAATTCACTCCAGGATGATAAAGGAGCAATGA
CTTTTTACCTAATTGCTGCTCTTTTGAATCCTACTAAATATTCATCTCTT
TGGGAAATGATTTTTAGTTGGTCCATGTGAGATGACTTCTTAGTTTTgtt
gtttctgttatttttgtGAAGTTATTCTTTTGGAATAATTTGGCTACATG
AATCTATACACCTACCTCAATTGTGATGATGGTTAAAATTTCATCTAGTA
ATGTCCTTGAAATATTATGCATGTATTACTTTCAAACAATGttgaaagaa
atattatgattattgaATTGTGAAACTTTTTCAAGTGCAGAAAACAAGGT
CATAAAGATCAAGCACGATATTGTCTTTTAAAAGCAATAACAGCAGATCC
CAAAAATATTACTCTTAGACGTGATCTTGTAGGGCTTTATGTTGAACTTG
GAGACTATCAAAAAGCTGCTGTTACATATGAGCAAGTACATCAACTCTGT
TATGAGAATGTTGAACCACTGAAAGAAGCAGCTAAGGTTAGTCTTTGCTT
TGAGATACCATGGACATGGATTCAATTTTGTCAATAATCCTTTgcaattt
gtttttttgttaacgATTATTTCCAATGGAAATCACGGTTTGCCTTGTGA
TGCTTTATTAATGCATTTATCGCATATGCTTGTATGTTATATGAGTAACT
AACATCTTTGAAATGGTAAACAGATGTGTATAAAATGTAATGTTGGAGAG
GggtaaactttaaattattttatatacatgCAAAAAGTATAGGGTTGGGA
gctgataatatttttattctcttacacattaataaattgattttcaatgt
cAAACTGAATTTATATTGCTTTCTATCAGTTGTACAAAAAATGTGGTCAA
GTTGAGCATGCTGTTTGTATTCTTGAAGACTATCTTAAGAGTCAACTGGA
CGGAGCAAATGCGAGTGTAGTTGATCTGCTGTGTACCATATTGATGGAAA
CTAAGGCACATGACAGAGCTTTGCAGTATATTAAACATGCCCAAGCTGCA
AATGCATGGGAAGAATTACcgttgaatttgaaaattaaggCTGGAATTTG
CCATGCTCATCTTGGAAAAATGGATATGGCTCAGGTGTGACTCATGCTTA
CTTATAATTGAATTTAGTGTGTTTTTCTTGATCATGGACCCTTTTAATCT
TGCTTGAACCTCATATATTAGGTTAGGTTAATTGATATTCTTTCGTGTCT
TTGGATGAGTATTTAGTTTAGACTTTCTTAGTTATCttgatttttttctc
tttcattctatatgttctttctttcttgtgtcCTGACCAATTTATGTGTA
ACACACATTGTTACCTATCCACCATAATTTTCCCTCCATGTAATATATCC
CTTATGAAGCATGGGTTTTGAATGAGATTTGCACGTAATGTTTTGCTGAT
TTCCTATTTTATGTAGATTttgttctctcttctttttattcTAAATAAGA
AAACTTAACTTTATGGTCATCTTGTATATAATGTTTTTTCCTTATAAAAT
GGCTtcttttcttaagaaaaaagattaatttcatAGTCTTTGTAATCGTG
TacaactctctttcttctccaaCCCCATTTTTGAAGCacattatatcatt
atttttgaGTTACTTTTTCCATGTTTCTCATTAACTTAATTGCATACAAT
GTTGGAGTGCAAGAAAATGTCTAATAATACATGTAATGACAGTGTATGAA
TCTTTCTTTTGACTTTGGTTTCATTTTTATGTATTACTTAACATTTCATT
TGATTACTAGGTTCTCTTCAATGATTTGAAACCAGAGAATGCAAGCAAGC
ATGTTGACTTGGTTATTGAGGTTGCTGATTCATTAATGGGTCTTGAACAT
TATAACCCTGCATTGAATTACTATTTGATGTTGGAAGGAAATATTGGAAA
CGAAAATGTATGGTAACTCCTGCCCATGCATGCCAATTATTGGTTTAATT
TTATACCAGTAATTTGCTTAATTAGGTGACTGTTTTTGTCTTATAATCTG
ATGGGGCTGTATATATTGgaatctttaaatttattgtccatatttttgtt
agaaatataatataaaaccaTTCTTGTGTCTTTACATAATAACTCAAGCT
TTTAGGGCTGTTGTTTGTTCCATGACTGAGTGGTCTAGAGTTTGATCCTT
ATTGACCTATCCAGTAGGCACAATTACAAGAGATGGGTATGATAAAACAT
GGACATGAACACAGGAATGcaaccaattttaaaaatattggatAACacat
ctataatttttaaattataaaagagaaTTCATGTTTCAAAAATGAGCACA
AGTTATTATGAACActaaaaaatgcaaaaaatgaTCTGATTATTGTGCTA
TCTAATCAGTATTGTTATTGACTACTTGAGTTTTTCTAATACATTTCCTC
ATGCCCAATGTTATTGGGTTTGTTGTTTGAGTAATAATAGTGTTTCTTTC
TGTACCCAATAGATTTCTTGAGCCACCTCCCATTCACTTTGGACGtattt
tgaagtaaaaatgTACATTGGGAAAATCGATTGTATTCTGTTATAAAAAC
CCATTCCCGAAGGAATGGGGTGGCTCAAAAAAATTGTGTGCAGGAAGAAA
CACTTTTATGGAGGTGATTAGTTAATAGATCAAACTAtaacaactttaat
tttaatatggaTTATacattatgttaaatatattgcgttttatgttaatt
agagAAACACAAACTTTTGCTATTACTTGATATTGGTACATATTGTTCAT
ATTGTTTTTAACAACATCTTCTATTTTCCATATTTATATTTGGTTGTCAT
ATATACTTGTATCATTCTTCATTATACATATATTACTCTATGTGTGTTTT
AGACATAAGGGAGATTAATTCTATATctagttttactatattcaataaat
ataagaCCTTCATATGATTTATGTTTGGAGCTAATTAAACCCCGTGAACT
AGCTTGAAAGGGCCCCAACAAAGTGGCTTTTGAGCTTGAGAGTTGTCTCC
CACTTATGTACTCTTCTTAGTTTCTATGTTTTGATGTGAGACTACTTGGG
ATTTTTTCCTGAAGCTAGTTGGAAGGACATAATAGAGGGACTGTATTGTC
TATTTGTATCTAGTATCAAATGTAATTGTTTACTGTTTtcaatttattct
attttctttggCTCTTTTCGGTTGCCTGatactatttattttagtttaga
aatatatttcagTGTATGCCTTTCGTCATCATCACTATGTTATCACGata
ttctatatttttactGGAATTATTTCTTGCAGGGTCCTCTATATCTGAAA
CTTGCTAAATGTTACAGGTCCTTGAAAGAAAGTTCACAAgcaattacttt
tttttacaaaggcaagattttatttttaaagagaatGTTATTTAGTTAAT
GATACCTTGTGAAAACCACTTCCCCtttgtttttcaatataaatgaaATG
TTCTATCGATCATTTCTTTTTGTGATGAAGCttctgaaattattttttat
tgccAAAATCTTTTAGTTTGGGTCCATCCTTTTTTCTTGCGGGAGTAGGA
TTTCACTTTAACATCATAGAATCAAGCAGTTCTCAAATGTATTCTTGGAT
TGCTTTACTTTTGAGTAAACTTTTTATGCATAACGTAACTGAAGATCTAA
TAGTATGCATTCTTCACATATAGATCAATAGACAGGTTTACATTTTTCAA
GTAATCTGATATGTGAGCTTTCCCATTAGCTTCTTCATTCAAAGACAGTT
ACATTGTTTTGGAATGAACTTTCTGTAgttttttctttgatattttGTGT
GCTTCTTTACTGTTGAGAAACATATAATTGCTGGTTTTCAGGTTTATTCG
TTTTGGAAGAAACAAGCTAAAATTTTGTGGcattaattttatgtaattgt
CTTGTGAGATTGGTGCATTCGTTGGAAATAATTACATCTTTAAGAGTGTC
TTTCACTCTATATTTGATTTGGAATAGGAATTTTTTTTGTAGCTTCTCTC
TACTGGTTTGCTCATGGATGTCACAATGAGTTTTTGTTTCAGGTTTTGCA
AAGAAATTAAACATGCTTCATTCTTGGTTTTAtcctttcacttttttttt
tgaggTTATCTTATCTGCTTCCCTTTATTCCActttttattatcttcttt
ttgtttatcaaaatactataattttaactattgaaTTATTGGTTAAGGGG
AGAAAAAGGGAAGTATGTCAAATTCAAAATGCTAATCGTTGTATCACTTC
ATAATTGACTTCAGTTATAAGAGCATATTTTAGGCTTGTATTGTTATGCT
AGTGCATGTAGATTCAGTGACAGAGAAACAATACTCTGTTGTTGCTTCCT
GATGATTGTTCTGCTGTGAAATATTCATACTCCCTGGTTGCTAAACAAGA
TTTTGTTTCAGCCCTTGAAATACTACAAGATGACGTTGATGCACGGATAA
CTCTAGCTTCCCTTCTGCTTGAAGAGGGAAAAGAAGATGAAGCAATTTCC
TTGTTGTCTCCTCCAAACGATTCTGGTATTTCCAACGTTTTCTTTCTCTA
CAGTTGAAGTTCTTGGATGGAGATTTTAATGTGAAAAACTTGCAGACTCT
GGTGATGCAAATCCTGAAAAGTCAAATAGATGGTGGGTTAATGGAAGGAT
AAAACTGAAGCTCTGCAACATTTATAGGAATAGAGGGACACTTGGTGATT
TTGTGGATACAATTTTCCCTTTGGTTCGTGAATCATTAGATGTTTCAACT
CTTCGACAGAAGGTAATATTTGAGAAGCCAAAATTTGACCCCTTTGGCAC
ACAGTCAAATACAGATTGATTGGTAGATGCTCTTGGACGCCTATGTGGGC
ATGCCTCTTGCTTGCTTCAGAATGTTAACATGTTGATAAACTACATTATT
TCAAGTAGAtcttaaaattgatttgaattttcaaaaggCGTTATTGCTGT
AGGGTAAATCAAAAAGGCGACTCACCAAAAGAGATCTGGTCGAAAGGGTT
AGGATGGTAGATGGTCCAGAAAATGATAATGTATTTCGAGGATTCAGGCC
AGTAGCTGCACCATCTGACCGGTAAGTGTTTGTGTCGTTTCCTAGTATAC
GTTAATCATATTCTAACTCAATTATGGGTGATCTATGGTTTGATTAACTA
ACCTCGGTTAACTAACCCGGTTAACTAATCTCGATTAACTAACCCCGGTT
AACTAACCCGGTTAACTAACTCCGGTTAATTAGCCACGATTAACTAGCTC
CAGTTAACTAGTCCTAGTTAACTAGCCTAAGTTAACTAACCCCGGTTAAC
TTGCCACAGTCAACTAGCCACAGTCAACTAGCCACAGTTAACTAGTCACG
ATTAACTAGCCACGGTTAACTAGCCAAAGGTTAACTAGCCACAATTAACT
AGCCACAAATAACTAACCACGGTTAACTAGTCACGGTTAACTATCCACGG
TTAAGTAGTCACGGTTCACTAGCCACGTTTAACTAACCCTAACCTTAACC
AACTAGTGATCTTACTCTTGTTTAATTGATGTGGGTCTTCATACTCAAAT
TTAATCATACCAATCTCCCTCTAAGTAGGTATTTGGAGTTGTGCAATGTT
GGGAAGCCATTTTTGTTATCGTCACCTTAAACCTTCTGAAATTCAAAGag
tattattagtattattatacctaaattttcattttttaaatattatgata
CTATGACTTCAAACATTTACTTCAATGTATCCTCTCCGTTATTATTCTAT
ATTTGGAAAACCATAGGATGGCATCCCCTTGGCAATATCTGTGTGATGCA
AATATAATACATGTATCTGTGCATTGGATGTACTACCTACATTGCagata
ttacaaaatattttgggTGAATAATTTGTCTTAGTGTTTATTCTTTTTCA
TGTTGTTGGCCATTGCTAGATTTGGATACAAAGTGAAAAGAATGTGTTTT
CTGTAATTAGGTTGAAAGCTTCCAGGGCAAAAAAGTTGCTGCAGAAGATG
GCAattgaaaaggagaaaagaaaagctgAGGCACTGGCCTCCGGAATTGA
TTGGCTAAGTGATGATTCAGATGATGAACCTCAGGTGATCCGTTTAGTGT
TGTCTACTCAATTCTAGAACAAATTTCTTGATGATTATGTCTTAACTCCC
TTTTGGGTTTATTGCATGAGATATTTTTAGATAGAAAACAGAGAACCTCC
CTTGTGCATTCTTCGGAAATATGAAGAACATCACCAGCTAATAATCGATG
TTAGTACTTCGATTAATTTTTTTGCTGCACCCCCTTTCCTCTGTTATATG
TCTGACACGTTAATATTATTGGACAGTTGTGCAAGGCATTAGCATCCTTG
CAAAGGTATTGGGAAGCACTGGAGATTATTAATCTCTCTCTAAGATTGGC
TGGTACATCTCTGTCTACTGACAAGAAAGAGGAACTTCGATCCCTTGGAG
CTCGTAAGTACTGAAGACAGGCTTTTGCTTATAGATTTATTCTTTGCTTT
CAAGTTCCAACTTTTCTCATTCgaagaaatcaaaataaaaattaaagaat
tcaCTGCTTGTTTAATGTTTATGTTTGTTTCTTTCCCTTCTTTAGCTTTA
CATATTTCCTTTATTACAACTCAGAATATAAatgttcttttttaaaaaaa
agaaaattaatgctTTTAGGGAGGGAAAAAGCTTATCTTGctgataaaac
aaatttatgttCTCCACAGAAATGGCATACAGCACCACGGATCCTAAACA
TGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCACACAGTGTTG
CAGCTTGGAATTGCTACTACAAGGTTATCTCAAGGTAATTTTGTGAATGC
ATGGAACCATGGGTTCTCGGCAAAATTGGTTAGGCTTTCTAATTTGTTGT
GATAGGTTTATGACCTAAAGATAAACAAAGACCTGTTTGTAAAACGTGGT
TTACATGTTCTCTCCTGGTTTATAGATTGGAAAACCGAGATACAAGACAT
TATAAATTTGTACGTGTTATACAAGGAAAGTTTGTGGACTGTGTGCCTCC
TATTCTAATTTCTGGCCATCAGTTTACCATATTTAGCCATCATCAAGATG
CAGCAAGGAAATACCTTGAAGCTTACAAACTATTGCCAGAGAATCCCTTG
GTTAATCTCTGCGTTGGTATGCTTTTCATGTCATGCTGTGTATGTACCGC
TTTCCTAACCAAGAACTAACAGTAATTGATGagttaattttatcaatttt
tctcaGGAACAGCCTTGATCAACTTAGCATTGGGTTTCAGACTTCAGAAC
AAGCATCAATGTCTTGTACAAGGTTTAGCATTCCTCTACAACAACTTGAG
AATCTGCGAGAACAGCCAGGTTTGTCTGCTGAGAATTTCCTGCAGTTTTT
TAGCCCATtaagaagaaaatgttttattaaatattaataataaatgcgac
aatatgaaaaaaaaaaatgggctCCTCTgagattataaattaaattacaa
aaaaaaaaatcttgaattCATTGAGTTCctataaatgaaaatacaaataa
gCATTGAACAAGCTGATGTAGGCGTTCAGGCACTGAACTTCATAAGATTG
ATTGTTGTCGTGAATTTCTTACGTTGTCATTTATTCAATGTGAGAACGAA
AAACCTTGCAGGAATCCTTATACAACATAGCTCGGGCCTATCATCATGTT
GGCCTTGTAACTCTGGCGGCTGTTTATTATGAGAAAGTGATTGGTATTCG
CGAGAAAGACTGTCCAATTCCAAAACTTCCCAATGAAAATCCAGATGTCA
TCGAAAATCATAAACCTGGTTACTGCGACCTTCGCAGAGAGGCAGCTTAC
AATTTACATTTAATCTACAAAAAAAGTGGCGCTCTTGATCTTGCTAGGCA
AGTTCTCAAAGATCACTGTACCTTGTGA

Coding sequence (CDS) from alignment at Chr_8-CM003378.1:28495200..28505727+

>LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g187800_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g187800; organism=Vigna angularis; type=CDS; length=2559bp; location=Sequence derived from: Chr_8-CM003378.1:28495200..28505727+ (Vigna angularis
ATGGCAAAAGAGGGAAGCGACTTTGATGAAGTAAACGACGCGGTGGATGG
CACGggggaggaagaggaagagcaAGCAGCGGAGGAAGAGGACAATGACA
TGGAAGAAGAGAATGAGTATACTTTCAGGTTCGAAAACGGGATGAATCCT
TTGGACTTTGTCGATAACAATGACGATTCTGGCCTTCAACCCTACGAGCG
ATTCGAGCGTCTTGAACAGCAAGCTCTTGCCGATAAAAAACGAAAAGCAA
CTGAACAATGCCACAGTGAAGGGCCTCCTTCTAAGATGGCTAGGGAAAGT
GATATTTCCGGGTCAAAGATAGCTGAGATAATGGAAGCAATGAATTATCA
TGGTGTGCGCAAGAGATCAAGAAAGCCTAAAAAGAGAGGCAGGCGAAAAG
GATCGAAGAATAAAATGGACCCTAAGCTAGAACGGATGCTGGGTGATGCC
AATCTTCACTATTCACGTAAGCATTATGACGAGGCTAAAGATGTGCTGCT
TGAAGTTATTAAGTTGGCACCGAATGTGGCTGATTCTTATCACACCCTTG
GACTTGTCTGGCTTTATGTTGAACTTGGAGACTATCAAAAAGCTGCTGTT
ACATATGAGCAAGTACATCAACTCTGTTATGAGAATGTTGAACCACTGAA
AGAAGCAGCTAAGTTGTACAAAAAATGTGGTCAAGTTGAGCATGCTGTTT
GTATTCTTGAAGACTATCTTAAGAGTCAACTGGACGGAGCAAATGCGAGT
GTAGTTGATCTGCTGTGTACCATATTGATGGAAACTAAGGCACATGACAG
AGCTTTGCAGTATATTAAACATGCCCAAGCTGCAAATGCATGGGAAGAAT
TACcgttgaatttgaaaattaaggCTGGAATTTGCCATGCTCATCTTGGA
AAAATGGATATGGCTCAGGTTCTCTTCAATGATTTGAAACCAGAGAATGC
AAGCAAGCATGTTGACTTGGTTATTGAGGTTGCTGATTCATTAATGGGTC
TTGAACATTATAACCCTGCATTGAATTACTATTTGATGTTGGAAGGAAAT
ATTGGAAACGAAAATAGAAACAATACTCTGTTGTTGCTTCCTGATGATTG
TTCTGCTGTGAAATATTCATACTCCCTGGTTGCTAAACAAGATTTTGTTT
CAGCCCTTGAAATACTACAAGATGACGTTGATGCACGGATAACTCTAGCT
TCCCTTCTGCTTGAAGAGGGAAAAGAAGATGAAGCAATTTCCTTGTTGTC
TCCTCCAAACGATTCTGACTCTGGTGATGCAAATCCTGAAAAGTCAAATA
GATGGTGGGTTAATGGAAGGATAAAACTGAAGCTCTGCAACATTTATAGG
AATAGAGGGACACTTGGTGATTTTGTGGATACAATTTTCCCTTTGGTTCG
TGAATCATTAGATGTTTCAACTCTTCGACAGAAGGGTAAATCAAAAAGGC
GACTCACCAAAAGAGATCTGGTCGAAAGGGTTAGGATGGTAGATGGTCCA
GAAAATGATAATGTATTTCGAGGATTCAGGCCAGTAGCTGCACCATCTGA
CCGGTTGAAAGCTTCCAGGGCAAAAAAGTTGCTGCAGAAGATGGCAattg
aaaaggagaaaagaaaagctgAGGCACTGGCCTCCGGAATTGATTGGCTA
AGTGATGATTCAGATGATGAACCTCAGATAGAAAACAGAGAACCTCCCTT
GTGCATTCTTCGGAAATATGAAGAACATCACCAGCTAATAATCGATTTGT
GCAAGGCATTAGCATCCTTGCAAAGGTATTGGGAAGCACTGGAGATTATT
AATCTCTCTCTAAGATTGGCTGGTACATCTCTGTCTACTGACAAGAAAGA
GGAACTTCGATCCCTTGGAGCTCAAATGGCATACAGCACCACGGATCCTA
AACATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCACACAGT
GTTGCAGCTTGGAATTGCTACTACAAGGTTATCTCAAGATTGGAAAACCG
AGATACAAGACATTATAAATTTGTACGTGTTATACAAGGAAAGTTTGTGG
ACTGTGTGCCTCCTATTCTAATTTCTGGCCATCAGTTTACCATATTTAGC
CATCATCAAGATGCAGCAAGGAAATACCTTGAAGCTTACAAACTATTGCC
AGAGAATCCCTTGGTTAATCTCTGCGTTGGAACAGCCTTGATCAACTTAG
CATTGGGTTTCAGACTTCAGAACAAGCATCAATGTCTTGTACAAGGTTTA
GCATTCCTCTACAACAACTTGAGAATCTGCGAGAACAGCCAGGAATCCTT
ATACAACATAGCTCGGGCCTATCATCATGTTGGCCTTGTAACTCTGGCGG
CTGTTTATTATGAGAAAGTGATTGGTATTCGCGAGAAAGACTGTCCAATT
CCAAAACTTCCCAATGAAAATCCAGATGTCATCGAAAATCATAAACCTGG
TTACTGCGACCTTCGCAGAGAGGCAGCTTACAATTTACATTTAATCTACA
AAAAAAGTGGCGCTCTTGATCTTGCTAGGCAAGTTCTCAAAGATCACTGT
ACCTTGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

LR48_mrnaVigan08g187800