LR48_mrnaVigan11g043600
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Homology
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2) HSP 1 Score: 501.901 bits (1291), Expect = 4.367e-165 Identity = 320/796 (40.20%), Postives = 448/796 (56.28%), Query Frame = 1 Query: 115 EDVIVSSPKGTFTAGFRNVGENAYCFGVWFSQAE------KHVVWMANRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLE-LHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLV---SARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGNGRTSYNSSRVAVLDDLGLFSVSD---KYSLTTIDYGLLLQRRLTLDYDGNVRIYSRENGQEDWSIAGQFKSQPCFIHGICGPNSICSHDKAIGRKCECLEGYSWVDSQDWSLGCTPKFKTTCD--NKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGFQYSFAVENGNFWCYPKTKLLNGHHSPGFPGQ-FFVRLPKESAQENHLQNNDG--------LVCPRNAEMLLER-PYVKGKENGSVKFMLWFAVGLGGF--EAVCIFMVWCFLFRSS--DHLVRADQQGYVLAAATGFRRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDNRVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNS----LDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGR--SPMIGVQVTEPGQDSHNERLATWVREKRRKTP-EGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERL 2394 E + S GTF++GF V +A+ F VW+S+ E K +VW AN D PV+ +RS+L+L K+GN+VL+D VW + ++ L DTGNLV+ + + + +W+SF+ PTDT LP QL+T T+LV +RS GNY F L +V L+Y QVS +YWPDP N+ + +GR YNS+R+ +L D G+ + SD +L D G ++RRLTLD DGN+R+YS + WS++ +QPC IHG+CGPN IC + C C GY+ + +W+ GC TTCD +K R V L DF+G D + + + C +C+ C C GFQY + G CYPK L +G P + +++LP + N L L C R + + E P V G K+ ++ F E I W F+ + + A ++GY A + FRRY+Y EL +AT+ F E+GRG GTVYK VL D+R A+KKL E QG+ F E+S+IGR+NHMNL+ +WG+C EG HR+LV EY+ENGSLAN L S LDW R+NIA+G+AKGLAYLH ECLEW++HCD+KP+NILLD ++PK+ DFG L + + S +RGT GY+APEWV +L IT+KVDVYSYG+V+LE++TG S ++G G D + L VR K E SW++ +D L N + L +A+ C+EE++ RP+M V+ L Sbjct: 44 ESSTLQSSDGTFSSGFYEVYTHAFTFSVWYSKTEAAAANNKTIVWSANPDRPVHARRSALTLQKDGNMVLTDYDGAAVWRADGNNFTGVQRARLLDTGNLVI--EDSGGNTVWQSFDSPTDTFLPTQLITAATRLVPTTQSRSPGNYIFRFSDL-----SVLSLIYHVPQVSDIYWPDP---DQNL-YQDGRNQYNSTRLGMLTDSGVLASSDFADGQALVASDVGPGVKRRLTLDPDGNLRLYSMNDSDGSWSVSMVAMTQPCNIHGLCGPNGICHYSPT--PTCSCPPGYATRNPGNWTEGCMAIVNTTCDRYDKRSMRFVRLPNTDFWGSDQ-QHLLSVSLRTCRDICISDCTCKGFQY----QEGTGSCYPKAYLFSGRTYPTSDVRTIYLKLPTGVSVSNALIPRSDVFDSVPRRLDCDRMNKSIREPFPDVHKTGGGESKWFYFYGFIAAFFVVEVSFISFAWFFVLKRELRPSELWASEKGYK-AMTSNFRRYSYRELVKATRKFKVELGRGESGTVYKGVLEDDRHVAVKKL-ENVRQGKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFG-LVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVG------GTDEVHSMLRKLVRMLSAKLEGEEQSWIDGYLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTL 812
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: Y1343_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana OX=3702 GN=At1g34300 PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 2.512e-90 Identity = 245/776 (31.57%), Postives = 372/776 (47.94%), Query Frame = 1 Query: 133 SPKGTFTAGF-RNVGENAYCFGVWFSQAEKHVVWMANRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGNGRTSYNSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQRR-LTLDYDGNVRIYS---RENG--QEDWSIAGQFKSQPCFIHGICGPNSICSHDKAIGRKCEC-LEGYSWVDSQDWSLGCTPKFKTT-CDNKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGF-QYSFAVENGNFWCYPKTKLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAV-----GLGGFEAVCIFMVWCFLFRSSDHLVRADQQGYVLAAATGFRRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDNRVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNL----PSNSLDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALE--CVEEEKDVRPSMSQVVERLQ 2397 SP TF+ F + N++ V F A +W A R SL L +G+L L++ VWD+KT + DTG +LL NRS +W SF+ PTDT++ Q T L SG Y + L + S++YW S + + R S ++ V + + L ++ + + DYG R L LD DGN+RIYS R +G WS Q C ++G CG ICS++ C C + +VD D GC K + + C T ++ L + Y+ + +++ + L S + +GN W G+ P P +V+ VC LER KG +N S K LW GL G AV I + WC ++ + + A+ ++TY EL++ TK F E++G G GTVY+ VL++ V A+K+L E +QGE +F E++ I +H+NL+ + G+C +G+HR+LVYE+M NGSL N L + L W R+NIA+G AKG+ YLHEEC + I+HCDIKP+NIL+D ++ KV+DFG L N + S +RGTRGY+APEW+ NL ITSK DVYSYG+V+LE+++G+ + + +++++ + W E+ K + I+D L D V +++ V C++E+ RP+M +VV+ L+ Sbjct: 44 SPNSTFSVSFVPSPSPNSFLAAVSF--AGSVPIWSAG----TVDSRGSLRLHTSGSLRLTNGSGTTVWDSKTDRLGVTSGSIEDTGEFILLN--NRSVPVWSSFDNPTDTIVQSQNFTAGKIL---------RSGLYSFQLERSGNLTLRW---NTSAIYWNHGLNSSFSSNLSSPRLSLQTNGVVSIFESNLLGGAEI--VYSGDYGDSNTFRFLKLDDDGNLRIYSSASRNSGPVNAHWSAVDQ-----CLVYGYCGNFGICSYNDT-NPICSCPSRNFDFVDVNDRRKGCKRKVELSDCSGNTT--MLDLVHTRLFTYEDDPNSESFFAGSSPCRANCLSSVLCLASVSMSDGSGNCWQKHPGSFFTGYQWPSVPSTSYVK-----------------VCGPVVANTLERA-TKGDDNNS-KVHLWIVAVAVIAGLLGLVAVEIGLWWCCCRKNPRFGTLSSHYTLLEYASGAPVQFTYKELQRCTKSFKEKLGAGGFGTVYRGVLTNRTVVAVKQL-EGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRLLVYEFMRNGSLDNFLFTTDSAKFLTWEYRFNIALGTAKGITYLHEECRDCIVHCDIKPENILVDDNFAAKVSDFG-LAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLELVSGKRNF------DVSEKTNHKKFSIWAYEEFEKGN-----TKAILDTRLSEDQTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQMLE 757
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: LERK2_ORYSJ (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK2 PE=3 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 9.099e-88 Identity = 243/796 (30.53%), Postives = 374/796 (46.98%), Query Frame = 1 Query: 133 SPKGTFTAGFRNVGENA--YCFGVWFSQ-AEKHVVWMA----NRD---VPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGNGRTSYNSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQ----RRLTLDYDGNVRIY-------SRENGQEDWSIAGQFKSQPCFI------HGICGPNSICSHDKAIGR-KCECLEGYSWVDSQDWSLGCTPKFK-TTCD-----NKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGFQYSFAVENG-NFWCYPKT-KLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAVGLGGFEAVCIFMVWCFLFRSSDHLV-RADQQGYVLAAATGF--RRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDN--RVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNS-LDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERL 2394 SP F GF V N+ Y VWF++ A+K V+W A NR +P+ + S+ L +G L L D +VW+ + + DTGN LL + WESF P+DT+LP Q+L T L S +YS+G ++L +D L V S Y+ DP+ SN VG G+ + R+ F++++ + G+ R TLD DG R Y +R QE W C G CG NS C+ D C C + Y + D++ GC P F+ +CD +Y + P+ +++ DY Y ++ + S AV N + CY K L NG+ +++P+ + N+ ++ K K++ ++L ++ G V +++ LF + + R Q L + +G + +TY EL++AT GF E +G GA G VYK L D A+KK+ + + + EFL E+ IG+ H NL+ + G+C EG ++LVYE+M NGSL L ++S W R +A+G+++GL YLHEEC + I+HCD+KPQNILLD ++ K++DFG + + IRGTRGY+APEW N+ ITSKVDVYS+G+++LE++ R V D L W + R ++ +V + +N+KK+E VAL C++EE +RP+M +V++ L Sbjct: 44 SPTADFAFGFLAVDGNSSSYLLAVWFNKIADKTVIWYAKTSSNRQDDTIPIQVQAGSILKLADGALSLRDPSGNEVWNPRVTDVG--YARMLDTGNFRLLGTDGATK--WESFGDPSDTILPTQVLPLGTALHSRLLATDYSNGRFQLNVQDDGNLVLYLVA--VPSAYYHDPYWASNTVGNGSQLVFNETGRI-------YFTLTNGSQINITSAGVDSMGDFFHRATLDTDGVFRQYIYPKSKQARSLWQEQWRAVDALPENICQTIQTKVGSGACGFNSYCTFDGTKNTTNCLCPQRYKFFDNERTYKGCRPDFEPQSCDLDETAAMVQYEMTPIDRINWPLSDYEQ------YSPIDETECRRLCVIDCFCSVAVFNKPSNTCYKKKLPLSNGNMDSSLQATVLLKVPRST----------------NSPSMISSGSSKWKKDKKY-WILGSSLFFGSSVLVNFLLIFVLLFGTYCSITSRKKTQLSQLPSNSGLPSKIFTYRELEKATGGFHEVLGTGASGIVYKGQLQDECGTNIAVKKIEKLQQEAQKEFLVEVQTIGQTFHRNLVRLLGFCNEGTEKLLVYEFMSNGSLNTFLFNDSHPHWSLRVQVALGVSRGLFYLHEECNKQIIHCDMKPQNILLDDNFVAKISDFG--LAKLLPVNQTQTNTGIRGTRGYVAPEWFKNIGITSKVDVYSFGVILLELVCCRK-----NVELEVADEEQTILTYWANDCYR-----CGRIDLLVASDDEAIFNIKKVERFVAVALWCLQEEPSMRPTMHKVMQML 791
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: LERK2_ORYSI (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK2 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.753e-87 Identity = 241/796 (30.28%), Postives = 374/796 (46.98%), Query Frame = 1 Query: 133 SPKGTFTAGFRNVGENA--YCFGVWFSQ-AEKHVVWMA-------NRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGNGRTSYNSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQ----RRLTLDYDGNVRIY-------SRENGQEDWSIAGQFKSQPCFI------HGICGPNSICSHDKAIGR-KCECLEGYSWVDSQDWSLGCTPKFK-TTCD-----NKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGFQYSFAVENG-NFWCYPKT-KLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAVGLGGFEAVCIFMVWCFLFRSSDHLV-RADQQGYVLAAATGF--RRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDN--RVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNS-LDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERL 2394 SP F GFR V N+ Y VWF++ A+K V+W A + +PV + S+ L +G L L D +VW+ + + +TGN LL + WESF P+DT+LP Q+L T L S +YS+G ++L +D L V S Y+ DP+ SN VG G+ + R+ F++++ + G+ R TLD DG R Y +R QE W C G CG NS C+ D C C + Y + D++ GC P F+ +CD +Y + P+ +++ DY Y ++ + S AV N + CY K L NG+ +++P+ + N+ ++ K K++ ++L ++ G V +++ LF + + R Q L + +G + +TY EL++AT GF E +G GA G VYK L D A+KK+ + + + EFL E+ IG+ H NL+ + G+C EG ++LVYE+M NGSL L +++ W R +A+G+++GL YLHEEC + I+HCD+KPQNILLD ++ K++DFG + + IRGTRGY+APEW N+ ITSKVDVYS+G+++LE++ R V D L W + R ++ +V + +N+KK+E VAL C++EE +RP+M +V++ L Sbjct: 44 SPSSDFAFGFRAVDGNSSSYLLAVWFNKIADKTVIWYAKTSSNGQDDTIPVQVQSGSVLKLADGALSLRDPSGNEVWNPRVTDVG--YARMLNTGNFRLLGTDGATK--WESFGDPSDTILPTQVLPLGTALHSRLLATDYSNGRFQLNVQDDGNLVLYLVA--VPSAYYHDPYWASNTVGNGSQLVFNETGRI-------YFTLTNGSQINITSAGVDSMGDFFHRATLDTDGVFRQYIYPKSKQARSLWQEQWRAVDALPENICQTIQTKVGSGACGFNSYCTFDGTKNTTNCLCPQRYKFFDNERTYKGCRPDFEPQSCDLDETAAMVQYEMTPIDRINWPLSDYEQ------YSPIDETECRRLCVIDCFCSVAVFNKPSNTCYKKKLPLSNGNMDSSLQATVLLKVPRST----------------NSPSMISSGSSKWKKDKKY-WILGSSLFFGSSVLVNFLLIFVLLFGTYCSITSRKKTQLSQLPSNSGLPSKIFTYRELEKATGGFHEVLGTGASGIVYKGQLQDECGTNIAVKKIEKLQQEAQKEFLVEVQTIGQTFHRNLVRLLGFCNEGTEKLLVYEFMSNGSLNTFLFNDTHPHWSLRVQVALGVSRGLLYLHEECNKQIIHCDMKPQNILLDDNFVAKISDFG--LAKLLPVNQTQTNTGIRGTRGYVAPEWFKNIGITSKVDVYSFGVILLELVCCRK-----NVELEVADEEQTILTYWANDCYR-----CGRIDLLVAGDDEAIFNIKKVERFVAVALWCLQEEPSMRPTMHKVMQML 791
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: LERK3_ORYSI (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK3 PE=3 SV=2) HSP 1 Score: 295.049 bits (754), Expect = 1.754e-86 Identity = 250/802 (31.17%), Postives = 373/802 (46.51%), Query Frame = 1 Query: 133 SPKGTFTAGFRNVGENA--YCFGVWFSQ-AEKHVVWMA-------NRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGN-------GR---TSYNSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQRRLTLDYDGNVR-------IYSRENGQEDWSIAGQFKSQPC------FIHGICGPNSICSHDKAIGR-KCECLEGYSWVDSQDWSLGCTPKFK-TTCD-----NKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGFQYSFAV-ENGNFWCYPKT-KLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAVGLGGFEAVCIFMVWCFLFRSSDHLV-RADQQGYVLAAATGF--RRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDN--RVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNS-LDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERL 2394 SP F GFR V N+ Y VWF++ A+K VVW A + +PV + S+ L +G L L D +VW+ + + DTGN LL + WESF P+DT+LP Q+L+ T L S +YS+G ++L D L+ V S Y DP+ SN V G+ GR T N S+V + G+ S+ D + R TLD DG R I++R E W+ C G CG NS C+ D C C + Y ++D + GC P F+ CD +Y + P+ VD+ DY Y ++ + + AV + + C+ K L NG P +++P+ + N+ + K KE+ ++L ++ G V ++ LF + + R Q + +G + +TYSEL++AT GF E +G GA G VYK L D A+KK+ + + + EFL E+ IG+ H NL+ + G+C EG R+LVYE+M NGSL L S++ W R +A+G+A+GL YLHEEC + I+HCD+KPQNILLD ++ K++DFG + + IRGTRGY+APEW N+ ITSKVDVYS+G+++LE++ R V D L W + + ++ +V + +N+KK+E VAL C++EE +RP+M +V + L Sbjct: 44 SPSADFAFGFRAVDGNSSSYLLAVWFNKIADKTVVWYARTSSNGKDDTIPVQVQSGSVLKLADGALSLRDPSGNEVWNPQVTDVG--YARMLDTGNFRLLGTDGATK--WESFGDPSDTILPTQVLSLGTALHSRLLATDYSNGRFQLKVQRDG--NLVMYPDAVPSGYLYDPYWASNTVDNGSQLVFNETGRIYFTIINGSQVNITS-AGVDSMGDFF------------HRATLDTDGVFRQYVYPKNIHARPLWPEQWTAVDVLPENICQSIQTMVGSGACGFNSYCTIDGTKNTTSCLCPQNYKFIDDKRKYKGCRPDFEPQNCDLDETTAMLQYDMAPIDRVDWPLSDY------EQYNPIDQTECRRLCVIDCFCAVAVFDKASSTCWKKRFPLSNGKMDVNVPRTVLIKVPRST----------------NSPSVFSSGSSKWKEDKKY-WILGSSLLFGSSVLVNFLLISVMLFGTYCSITSRKKIQLSQPSNKSGLPPKIFTYSELEKATGGFQEVLGTGASGVVYKGQLQDEFGINIAVKKIEKLQQEAQKEFLVEVQTIGQTFHRNLVRLLGFCNEGTERLLVYEFMSNGSLNTFLFSDTHPHWSLRVQVALGVARGLLYLHEECNKQIIHCDMKPQNILLDDNFAAKISDFG--LAKLLPVNQTQTNTGIRGTRGYVAPEWFKNIGITSKVDVYSFGVILLELVCCRK-----NVELEVLDEEQTILTYWANDCYK-----CGRIDLLVAGDDEAIFNIKKVERFVAVALWCLQEEPSMRPTMLKVTQML 791
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: LERK3_ORYSJ (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK3 PE=3 SV=2) HSP 1 Score: 292.352 bits (747), Expect = 1.629e-85 Identity = 249/802 (31.05%), Postives = 371/802 (46.26%), Query Frame = 1 Query: 133 SPKGTFTAGFRNVGENA--YCFGVWFSQ-AEKHVVWMA-------NRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGN-------GR---TSYNSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQRRLTLDYDGNVR-------IYSRENGQEDWSIAGQFKSQPC------FIHGICGPNSICSHDKAIGR-KCECLEGYSWVDSQDWSLGCTPKFK-TTCD-----NKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGFQYSFAV-ENGNFWCYPKT-KLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAVGLGGFEAVCIFMVWCFLFRSSDHLV-RADQQGYVLAAATGF--RRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDN--RVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNS-LDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERL 2394 SP F GF V N+ Y VWF++ A+K VVW A + +PV + S+ L +G L L D +VW+ + + DTGN LL + WESF P+DT+LP Q+L+ T L S +YS+G ++L D L+ V S Y DP+ SN V G+ GR T N S+V + G+ S+ D + R TLD DG R I++R E W+ C G CG NS C+ D C C + Y ++D + GC P F+ CD +Y + P+ VD+ DY Y ++ + AV + + C+ K L NG P +++P+ + N+ + K KE+ ++L ++ G V ++ LF + + R Q + +G + +TYSEL++AT GF E +G GA G VYK L D A+KK+ + + + EFL E+ IG+ H NL+ + G+C EG R+LVYE+M NGSL L S++ W R +A+G+A+GL YLHEEC + I+HCD+KPQNILLD ++ K++DFG + + IRGTRGY+APEW N+ ITSKVDVYS+G+++LE++ R V D L W + + ++ +V + +N+KK+E VAL C++EE +RP+M +V + L Sbjct: 44 SPSADFAFGFLAVDGNSSSYLLAVWFNKIADKTVVWYARTSSNGKDDTIPVQVQSGSVLKLADGALSLRDPSGNEVWNPQVTDVG--YARMLDTGNFRLLGTDGATK--WESFGDPSDTILPTQVLSLGTALHSRLLATDYSNGRFQLKVQRDG--NLVMYPDAVPSGYLYDPYWASNTVDNGSQLVFNETGRIYFTIINGSQVNITS-AGVDSMGDFF------------HRATLDTDGVFRQYVYPKNIHARPLWPEQWTAVDVLPENICQSIQTMVGSGACGFNSYCTIDGTKNTTSCLCPQNYKFIDDKRKYKGCRPDFEPQNCDLDETTAMLQYDMAPIDRVDWPLSDY------EQYNPIDQTECRRLCVTDCFCAVAVFDKASSTCWKKRFPLSNGKMDVNVPRTVLIKVPRST----------------NSPSVFSSGSSKWKEDQKY-WILGSSLLFGSSVLVNFLLISVMLFGTYCSITSRKKTQLSQPSNNSGLPPKIFTYSELEKATGGFQEVLGTGASGVVYKGQLQDEFGTNIAVKKIEKLQQEAQKEFLVEVQTIGQTFHRNLVRLLGFCNEGTERLLVYEFMSNGSLNTFLFSDTHPHWSLRVQVALGVARGLLYLHEECNKQIIHCDMKPQNILLDDNFVAKISDFG--LAKLLPVNQTQTNTGIRGTRGYVAPEWFKNIGITSKVDVYSFGVILLELVCCRK-----NVELEVLDEEQTILTYWANDCYK-----CGRIDLLVAGDDEAIFNIKKVERFVAVALWCLQEEPSMRPTMLKVTQML 791
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: RLK1_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana OX=3702 GN=RLK1 PE=2 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.806e-79 Identity = 247/808 (30.57%), Postives = 375/808 (46.41%), Query Frame = 1 Query: 133 SPKGTFTAGFRNVGEN-AYCFGVWFSQ-AEKHVVWMA---NRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLEL-HLHDTGNLVLLEQTNRSS--VLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRL------LYEGRQVSSVYWPDPWLVSNNVG----FGNGRTSY----NSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQ-------RRLTLDYDGNVRIYSRENGQEDWSIAGQFKSQPCFIHGICGPNSICSHDKAIGRKCECLEGYSWVDSQDWSLGCTPKFKT-TC--DNKTEYRVVPLYE---VDFYGYDYGT--SFQNYTYKQXXXXXXXXXXXXGFQYSFAVENGNFWCYPKT-KLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAVGLGGFEAVCIFMVWCFLFRS--SDHLVR--ADQQGYVLAAATG----FRRYTYSELKQATKGFSEEIGRGAGGTVYKAVLS----DNRVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNL---PSNSLDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERLQ 2397 SP G F GFR + N + +WF + ++K +VW A N + S ++L +G LV++D ++W + LS + D GN VL + S VLW SF PTDTLLP Q + L S R+E ++ G + L ++D +L + S Y+ NN G F Y N+SR V D FS++ + ++T G LL RR+ G + R+N G CG N+ICS KCEC E + D + C P F+ TC +N+T V LYE ++ + +G S+ NY ++C+ CL C C + N + C+ K L +G SP F+++ S + + P V G + +++ L G A IF C ++ S ++++ A G A T R +TY EL +AT+ F+EE+GRGA G VYK L A+KKL E EF E+ +IG+++H NL+ + G+C EG+ +++VYE++ G+LAN L P S W R NIA+ +A+G+ YLHEEC E I+HCDIKPQNILLD Y P+++DFG + + IRGT+GY+APEW N ITSKVDVYSYG+++LE++ + + N L W + R+ +E + + + +++ +E +A+ C++EE +RP+M V + L+ Sbjct: 52 SPSGDFAFGFRKIQPNDGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELW--RALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTETSFKKGRFSLRLEDDGNLQLHSLNAETASESDIYSQYYESNTNDPNNPGIQLVFNQSGEIYVLQRNNSRFVVKDRDPDFSIAAPFYIST---GFLLSTIIPKEARRIV---GGCLLGLCRDNMCSPDDALGNMA---------CGYNNICSLGNNKRPKCECPERFVLKDPSNEYGDCLPDFEMQTCRPENQTANSDVNLYEFITLEKTNWPFGDYESYANYDEERCKASCLSDCLCAAVIFG---TNRDLKCWKKKFPLSHGERSPRGDSDTFIKVRNRS--------------------IADVP-VTGNRAKKLDWLIIACSVLLGTSAFVIFDTSCSYRKTKKSKNMMKNQARDIGRTTATTTANELNLRVFTYGELAEATRDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPS--WEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFG--LAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAV---------DLEDNVILINWAYDCFRQ-----GRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLE 800
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: LERK4_ORYSJ (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK4 PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.432e-79 Identity = 241/795 (30.31%), Postives = 357/795 (44.91%), Query Frame = 1 Query: 133 SPKGTFTAGFRNVGENA--YCFGVWFSQ-AEKHVVWMA----NRDVPVNGKRSS-LSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDN--VFRLLYEGRQVSSVYWPDPWLVSNNVGFGNGRTSYNSS-RVAV-LDDLGLFSVSDKYSLTTIDYGLLLQRRLTLDYDGNVRIYSRENGQEDWSIAGQFKS-QPCFI--------HGICGPNSICSHDKAIGR-KCECLEGYSWVDSQDWSLGCTPKFK-TTCD-----NKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGFQYSFAVENGNFWCYPKTKLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWF----------AVGLGGFEAVCIFMVWCFLFRSSDHLVRADQQGYVLAAATGFRRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDN--RVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNSLD-WRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERL 2394 SP G F GFR + N+ Y +WF++ ++K W A P+ S L G L L D +VW+ + P L DTGN V+ S++ WE+F PTDT+L Q L+ KL S +YS+G + L + ++ + + YW P + NV +N++ R+ V + + F+++ + DY R TLD DG R Y S A S QP I G CG NS C D + + C C E YS+ D GC P F+ +CD + +Y + VD+ DY Y + + + AV + N K L NG G +++PK ++ + L+ + R + K+ LW + +V +F +C + R ++ + + ++Y+EL++AT GF E +G GA G VYK L D A+KK+ + + E EF E+ IGR H NL+ M G+C EG R+LVYE+M NGSL L S W R +A+G+A+GL YLHEEC I+HCDIKPQNILLD ++ K++DFG +++ IRGTRGY+APEW N+ IT+KVDVYS+G+++LE+I R V + L W + R V+ +VD + N+KK+E VAL C++EE +RPS+ +V + L Sbjct: 43 SPSGDFAFGFRPIDGNSSFYLLAIWFNKISDKTATWYAKTSEQEPQPIQVPSGSILQFTSTGVLSLRDPTNREVWNPGA-TGAPYASML-DTGNFVI-AAAGGSTISWETFKNPTDTILVTQALSPGMKLRSRLLTTDYSNGRFLLNMETQRAALYTMAVPSGNLYDPYWSTP--IDENVTNQVTNLVFNTTGRIYVSMKNGTQFNMTSGVIRSMEDY----YHRATLDPDGVFRQYVYPKKPSSMSQAWTAVSIQPENICNAQTKVGSGTCGFNSYCMFDGSNNQTSCVCPEQYSFFDEVRKYRGCRPDFELQSCDLDEAASMAQYEFNLVNNVDWPQADYEW------YTPIDMDECRRLCLIDCFCAVAVFHENTCWKKKLPLSNGIMGSGVQRTVLIKVPKSNSSQPELRKS--------------RKWKSDKK-------LWILGSSLLLGGSVIANFALSSVLLFGTYCTITRKDVQPLQPSRD-----PGLPLKAFSYAELEKATDGFKEVLGTGASGIVYKGQLQDELGTYIAVKKIDKIQHETEKEFAVEVQTIGRTYHKNLVRMLGFCNEGTERLLVYEFMVNGSLNRFLFSGVRPLWSLRVQLALGVARGLLYLHEECSTQIIHCDIKPQNILLDDNFIAKISDFG--LAKLLRTNQTQTYTGIRGTRGYVAPEWFKNVGITAKVDVYSFGVILLELICCRQ-----NVEMEAAEEEQSILTYWANDCYR-----CGRVDLLVDGDDEAKLNIKKVERFVAVALWCLQEEPTMRPSILKVTQML 784
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: LERK4_ORYSI (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.432e-79 Identity = 241/795 (30.31%), Postives = 357/795 (44.91%), Query Frame = 1 Query: 133 SPKGTFTAGFRNVGENA--YCFGVWFSQ-AEKHVVWMA----NRDVPVNGKRSS-LSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDN--VFRLLYEGRQVSSVYWPDPWLVSNNVGFGNGRTSYNSS-RVAV-LDDLGLFSVSDKYSLTTIDYGLLLQRRLTLDYDGNVRIYSRENGQEDWSIAGQFKS-QPCFI--------HGICGPNSICSHDKAIGR-KCECLEGYSWVDSQDWSLGCTPKFK-TTCD-----NKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGFQYSFAVENGNFWCYPKTKLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWF----------AVGLGGFEAVCIFMVWCFLFRSSDHLVRADQQGYVLAAATGFRRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDN--RVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNSLD-WRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERL 2394 SP G F GFR + N+ Y +WF++ ++K W A P+ S L G L L D +VW+ + P L DTGN V+ S++ WE+F PTDT+L Q L+ KL S +YS+G + L + ++ + + YW P + NV +N++ R+ V + + F+++ + DY R TLD DG R Y S A S QP I G CG NS C D + + C C E YS+ D GC P F+ +CD + +Y + VD+ DY Y + + + AV + N K L NG G +++PK ++ + L+ + R + K+ LW + +V +F +C + R ++ + + ++Y+EL++AT GF E +G GA G VYK L D A+KK+ + + E EF E+ IGR H NL+ M G+C EG R+LVYE+M NGSL L S W R +A+G+A+GL YLHEEC I+HCDIKPQNILLD ++ K++DFG +++ IRGTRGY+APEW N+ IT+KVDVYS+G+++LE+I R V + L W + R V+ +VD + N+KK+E VAL C++EE +RPS+ +V + L Sbjct: 43 SPSGDFAFGFRPIDGNSSFYLLAIWFNKISDKTATWYAKTSEQEPQPIQVPSGSILQFTSTGVLSLRDPTNREVWNPGA-TGAPYASML-DTGNFVI-AAAGGSTISWETFKNPTDTILVTQALSPGMKLRSRLLTTDYSNGRFLLNMETQRAALYTMAVPSGNLYDPYWSTP--IDENVTNQVTNLVFNTTGRIYVSMKNGTQFNMTSGVIRSMEDY----YHRATLDPDGVFRQYVYPKKPSSMSQAWTAVSIQPENICNAQTKVGSGTCGFNSYCMFDGSNNQTSCVCPEQYSFFDEVRKYRGCRPDFELQSCDLDEAASMAQYEFNLVNNVDWPQADYEW------YTPIDMDECRRLCLIDCFCAVAVFHENTCWKKKLPLSNGIMGSGVQRTVLIKVPKSNSSQPELRKS--------------RKWKSDKK-------LWILGSSLLLGGSVIANFALSSVLLFGTYCTITRKDVQPLQPSRD-----PGLPLKAFSYAELEKATDGFKEVLGTGASGIVYKGQLQDELGTYIAVKKIDKIQHETEKEFAVEVQTIGRTYHKNLVRMLGFCNEGTERLLVYEFMVNGSLNRFLFSGVRPLWSLRVQLALGVARGLLYLHEECSTQIIHCDIKPQNILLDDNFIAKISDFG--LAKLLRTNQTQTYTGIRGTRGYVAPEWFKNVGITAKVDVYSFGVILLELICCRQ-----NVEMEAAEEEQSILTYWANDCYR-----CGRVDLLVDGDDEAKLNIKKVERFVAVALWCLQEEPTMRPSILKVTQML 784
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Match: LERK1_ORYSI (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK1 PE=1 SV=2) HSP 1 Score: 273.863 bits (699), Expect = 9.805e-79 Identity = 236/808 (29.21%), Postives = 374/808 (46.29%), Query Frame = 1 Query: 133 SPKGTFTAGFRNVGENA--YCFGVWFSQ-AEKHVVWMANR--------DVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLL----TRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGN-------GRTSY---NSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQRRLTLDYDGNVRIY---SREN----GQEDWSIAGQFKSQPCFI------HGICGPNSICSHDKAIGR--KCECLEGYSWVDSQDWSLGCTPKFKT-TCDNK-----TEYRVVPLYEVDFYGYDYGTSFQNYTYKQXXXXXXXXXXXXGFQYSFAVEN-GNFWCYPKT-KLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAVGLGGFEAVCIFMVWCFLFRSSDHLVRADQQGYVLAAATG---FRRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDNRVA--AIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNSL-DWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGXXXXXXXXXXXXXXXXXXXGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERL 2394 SP G F GFR V N Y VWF++ ++K VVW A +VP + S L L +G L L D + W+ + + DTGN VLL + W++F+ P+DT+LP Q++ TR L + +YSSG + L D L S Y + ++ G G+ G+ + + +++ + D G+ S++D + R TLD DG R Y + N G E W+ C G+CG NS C+ D + C+C Y + D Q GC F+ +CD + ++ + P+Y VD+ DY Y+ + + + AV N C+ K L NG+ + +++P ++ ++ ++ K K N ++L ++ LG V ++ FLF + + A++ + +TY EL++AT GF E +G GA G VYK L D A+K +H+ + E EF+ E+ IG+ H NL+ + G+C E R+LVYE+M NG L L NS W R +IA+G+A+G YLH+EC + I+HCDIKPQNILLD + K++DFG + + IRGTRGY+APEW N+ I++KVDVYS+G+++LE++ R + ++V D + W + R + ++ +V+ + Y++KK+E TVAL C++E+ +RP+M +V + L Sbjct: 42 SPSGDFAFGFRPVEGNTSFYLIAVWFNKISDKTVVWYAKNTDQDPSIVEVPSD---SFLQLTNDGALSLKDRSGQEGWNPQVTGVA--YASMRDTGNFVLLGADGTTK--WQTFDMPSDTILPTQVIPCNKTRNKSLRARLDIDDYSSGRFLLDVQTDGNLALYLVAVPSGSKY--QQYWSTDTTGNGSELVFSETGKVYFALTDGTQINISSDAGIGSMADYF------------HRATLDPDGVFRQYVYPKKANAGILGGETWTALSMQPQNICHAIVSDVGSGVCGFNSYCTFDGTRNQIASCQCPPWYKFFDEQKKYKGCKQDFQPHSCDLEEATALAQFELRPIYGVDWPLSDY------EKYEPIGQDDCGRLCVIECFCAMAVYNQSTSTCWKKKLPLSNGNMADYVQRTVLLKVPSSNS----------------SQFMISTSSNKWKRNRK-HWVLGSSLILGTSILVNFALISIFLFGTYCRITTKKNIPLSQASSKSQLPLKTFTYKELEKATAGFHEILGAGASGVVYKGQLEDELKTNIAVKTIHKLQPETEKEFMVEVETIGQTFHKNLVRLLGFCNERAERLLVYEFMTNGPLNRLLFDNSRPHWNTRVHIALGVARGFLYLHDECSKQIIHCDIKPQNILLDDNLVAKISDFG--LAKLLLTNQTRTKTGIRGTRGYVAPEWFKNIGISTKVDVYSFGVILLELVCCRR-NVELEVV----DEEQTIVTYWANDCYR-----SGRIDLLVEGDDEAIYDIKKVERFVTVALWCLQEDPSMRPNMLKVTQML 793 The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan11g043600 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g043600; organism=Vigna angularis; type=mRNA; length=2557bpback to top protein sequence of LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1 >LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=805bpback to top mRNA from alignment at Chr_11-CM003381.1:5429197..5431753- Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g043600; organism=Vigna angularis; type=mRNA; length=2557bp; location=Sequence derived from: Chr_11-CM003381.1:5429197..5431753- (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr_11-CM003381.1:5429197..5431753- >LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g043600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g043600; organism=Vigna angularis; type=CDS; length=2418bp; location=Sequence derived from: Chr_11-CM003381.1:5429197..5431753- (Vigna angularisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|