LR48_mrnaVigan10g092100

Transcript Overview
NameLR48_mrnaVigan10g092100
Unique NameLR48_mrnaVigan10g092100_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1113
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_10-CM003380.1supercontigChr_10-CM003380.1:11282719..11283831 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR261Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR277Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL099Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0489Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0686Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0745Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0920Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0922Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1230Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR342Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR352Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0429Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0434Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0452Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR290Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR325Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR327Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR285Pisum sativum Cameor genome v1aPisum sativum
aspsR296Pisum sativum Cameor genome v1aPisum sativum
aspvR315Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR320Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR262Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR265Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR287Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR292Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR305Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR307Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR297Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR302Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR316Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR195Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR252Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR324Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR331Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR334Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR241Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR250Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR237Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR248Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Cr_08150.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_09260.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_014655749.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.5g181200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_014662257.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.5g142320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.007G181800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_08124Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_010499Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_012714401.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun06g104100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_004494577.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.3g085360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_01180Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_03702Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_15578Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr06.1160Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g148800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_09159.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-TanjilR_29298Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_07637.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr07.1327Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_007032Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_10101Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg30963.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.006G093800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan09g154300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan10g092100gene-LR48_Vigan10g092100_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092100LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-start_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11283829..11283831LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-start_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11283829..11283831Vigna angularisstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-CDS-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11282719..11283831LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-CDS-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11282719..11283831Vigna angularisCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11282719..11283831LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11282719..11283831Vigna angularisexon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-stop_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11282719..11282721LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1-stop_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11282719..11282721Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 8.681e-71
Identity = 152/329 (46.20%), Postives = 193/329 (58.66%), Query Frame = 1
Query:   88 QSTTNNQNESY-YNRFSPSMXXXXXXXXXXXFLMGFFSIYIRHCADSPSASIRNLTGATSRQR-----RGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRGIPVLNAPNDIEAQSEAQPEAHNDAVXXXXXXXXXXKLPISSEP-PQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQPGEDTERYTLRLPEEVRKQLLLNPELHRARSLVMLPXXXXXXXXXXXXXXXXXXXXXXXXXXXFKSDRWVFTMAPPFLVRASSVRSPRVANNG 1053
            QS     N+ Y Y R SP+MA+I+VILIAA+F MGFFSIY RHC+  P A +    GA SR       RGLD +V++TFPT  YS VK  KLGKG LECA+CLNEFED ETLRL+PKCDHVFHP CID WL +H TCPVCRANL  +  +     P    P+    Q    PE                  P+ + P P+ L  ++  +R         +  +F RSH+TGHS+VQPGE TER+TLRLPE+VRK+++ + +L+R  SL++LPR GSSRRG       +            +SDRW+F   P FL R+    S R+   G
Sbjct:   30 QSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVVVNPE------------------PVVTAPVPEQLVTSEVDSRRLPGVPVDLKRVKFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKPIDRSRA------------RSDRWLFRKTPSFLWRSRDDGSIRLGATG 328          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL31_ARATH (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 2.796e-63
Identity = 133/318 (41.82%), Postives = 174/318 (54.72%), Query Frame = 1
Query:  115 SYYNRFSPSMXXXXXXXXXXXFLMGFFSIYIRHCADSPSASIRNLTGATSRQR-----RGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRGIPVLNAPNDIEAQSEAQPEAHNDAVXXXXXXXXXXKLPISSEPPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQPGEDTERYTLRLPEEVRKQLLLNPELHRARSLVMLPXXXXXXXXXXXXXXXXXXXXXXXXXXXFKSDRWVFTMAPPFLVRASSVRSPRVANNG 1053
            +Y    SP+MA+++V++IAA+F MGFF++YIRHC  +   S+    GA  R       RGLD   I+TFPT  YS VK  K+GKG LECA+CLNEFED ETLRL+PKCDHVFHP CI  WL  H TCPVCR NL  +  +     P +    D+EAQ ++       AV     +    K P                                RSH+TGHS+V PGE T+R+TLR+PEE+RK+++ N +L+R+ S+ +LPR GSSR G +     +            KSDRW+F   P FL R     S R+   G
Sbjct:   36 AYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDGSVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPE-----PEVVVETDLEAQQQS-------AVPVPVVELPRVKFP--------------------------------RSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRSGKQVDRSRA------------KSDRWLFRKTPSFLWRNRDDGSIRLGGTG 297          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL11_ARATH (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.239e-47
Identity = 106/268 (39.55%), Postives = 147/268 (54.85%), Query Frame = 1
Query:  124 NRFSPSMXXXXXXXXXXXFLMGFFSIYIRHCADSPSA-------SIRNLTGATSRQRRGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRGI--------PVLNAPNDIEAQSEAQPEAHNDAVXXXXXXXXXXKLPISSEPPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQPGEDTERYTLRLPEEVRKQLLLNPELHRARSLVMLP 882
            +RF P+MAI++++L++  F +GFFS+YIR C +              N      +Q RGLD ++I+TFPT +YS VK  ++GK  LEC+VCLNEFED ETLRLIPKC HVFHP CID WL SHTTCP+CRA+L+P PG+S+  I        P  + PN    +S   P+A               +L  S      L  NQ++ R       +          +  HS     E+ +R+TLRLP+++  + L+NP L +    V LP
Sbjct:   57 SRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIVSIQIPGLVNDPPGSDPNGDRIRSLGSPDA---------------RLIES----VALTCNQSMPRRSMSTGWNLAGMFTNSDRTGQHS-----ENLDRFTLRLPQDIHNK-LVNPNLSKVH--VALP 297          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 4.319e-45
Identity = 94/240 (39.17%), Postives = 126/240 (52.50%), Query Frame = 1
Query:  178 FLMGFFSIYIRHCA----DSPSASIRNLTGATSRQRRGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVP---EPGDSVRGIPVLNAPNDIEAQSEAQPEAHNDAVXXXXXXXXXXKLPISSEPPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQPGEDTERYTLRLPEEVRKQLLL--NPELHRARSL 870
            FL G  S+YIRHCA    DS +   RN     S +R GLD AV+++FP   YS VK  K+G   LECA+CLNE ED ET+RL+P C+H+FH +CID WL SH TCPVCR+NL     +PGD   G+P+    + +    E         VE      +     IS + P+                          S+STGHS+ +  + TER+TLRLP++V+ +L+      L R RS 
Sbjct:   58 FLTGLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNKPGDEDDGVPLAAMRDHVVVDIE--------TVEVAKSHHRRLSSEISGKFPR--------------------------SNSTGHSMDRFSDGTERFTLRLPDDVKMRLMAVKGRRLKRTRSF 263          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL36_ARATH (Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.035e-40
Identity = 93/209 (44.50%), Postives = 124/209 (59.33%), Query Frame = 1
Query:  262 SRQRRGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRGIPVLNAPNDIEAQS-EAQPEAHNDAVXXXXXXXXXXKLPISSEPPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQP-GEDTERYTLRLPEEVRKQLLLNPELHRARSLVMLP 882
            SR RRGL++ VI++FPT  YS VK  K+GKG +ECA+CL+EFED ETLR +P C H FH  CID WL+S +TCPVCRANL  +PG+S    P LN   D+E    +  P   +     +  + +   L  S    ++                       PRSHSTGHSLVQ  GE+ +R+TL+LPEEV++Q L++  L R RS ++LP
Sbjct:   89 SRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESY---PYLNM--DVETGGVQKLPNERSLTGNSVTTRSRSTGLLSSWRMAEIF---------------------VPRSHSTGHSLVQQLGENLDRFTLQLPEEVQRQ-LVSLNLIR-RSHIVLP 269          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL15_ARATH (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 6.265e-40
Identity = 103/252 (40.87%), Postives = 130/252 (51.59%), Query Frame = 1
Query:  130 FSPSMXXXXXXXXXXXFLMGFFSIYIRHCAD-----SPSASIRNLTGATSRQRRGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRG-IPVLNAPNDIEAQSEAQPEAHNDAVXXXXXXXXXXKLPISSEPPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLV----------QPGEDTERYTLRLPEEVRKQLL 837
            FSP+ AII+++L++  F +G  S+Y+R C              N          GLD +VI+TFPT  YS VK  ++GK  LEC VCLNEFED ETLRLIP+C HVFHP CID WL S TTCP+CRANLVP PG+SV   IP L           A+    N             + PI     +V  L     R     + +G      +S STG  L           QP E+ +RYTLRLP+E+  QL+
Sbjct:   35 FSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVSSEIPGL-----------ARETGQNS-----------LRTPIDDNRKRV--LTSPDERLIDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLV 262          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.492e-39
Identity = 97/247 (39.27%), Postives = 123/247 (49.80%), Query Frame = 1
Query:  178 FLMGFFSIYIRHC----------------ADSPSASIRNLTGATSRQRRGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLV-PEPGDSVRGIPVLNAPNDIEAQSEAQPE---------AH-NDAVXXXXXXXXXXKLPISSEPPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQPGEDTERYTLRLPEEVRKQLL 837
            F M F SI+ R                  A+S    IR LT       RGLD   I+TFPT  YS VK  ++GKG +ECAVCL EFED ETLRL+P C HVFH +C+D WL+ H+TCP+CRA+LV  + GD        +  +     S   PE         AH  DAV                   Q+ G+                   FPRSHSTGHSL+QP  + +R+TLRLP++VR+QL+
Sbjct:   63 FFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTA------RGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLNQQGDDDDSTESYSGTDPGTISSSTDPERGMVLESSDAHLLDAVTWSNSNITPRSKSTGLSSWQITGI------------------LFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM 285          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL34_ARATH (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.176e-38
Identity = 92/208 (44.23%), Postives = 122/208 (58.65%), Query Frame = 1
Query:  259 TSRQRRGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRGIPVLNAPNDIEAQSEAQPEAHNDAVXXXXXXXXXXKLPISSE-----PPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQPGEDTERYTLRLPEEVRKQLLLNPELHRARS 867
            T R  RGL + VI++FP+  YS VK  K+GKG +ECA+CLNEFED ETLRL+P C H FH  CID WL+S +TCPVCRA+L P+PG     +     P+D +        A   +V   P+ +   +L  S+      PP+        +R+    +       FPRSHSTGHSLV   E+ +R+TL+LPEEVR+QL     L +ARS
Sbjct:   93 TRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPFIRPHDNQDMDLENVTARR-SVLESPDVRLLDRLSWSNNTGANTPPR--------SRSTGLSNWRITELLFPRSHSTGHSLVPRVENLDRFTLQLPEEVRRQLSHMKTLPQARS 291          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL37_ARATH (Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana OX=3702 GN=ATL37 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.748e-37
Identity = 82/201 (40.80%), Postives = 111/201 (55.22%), Query Frame = 1
Query:  262 SRQRRGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSV----RGIPVLNAPNDIEAQSEAQPEAH-----NDAVXXXXXXXXXXKLPISSEPPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQPGEDTERYTLRLPEEVRKQLL 837
            SR RRG+D+ VI++FP   YS VK  K+G G +ECA+CL EFED E LR +P C H FH  CIDEWL+S +TCPVCRANL  + GDS       +   NA   ++   + +         N+       + +   L  S   P++                       PRSHSTGHSLVQP ++ +R+TL+LPEEV++QL+
Sbjct:   86 SRVRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSLKSGDSFPHPSMDVETGNAQRGVQESPDERSLTGSSVTCNNNANYTTPRSRSTGLLSSWHVPELF---------------------LPRSHSTGHSLVQPCQNIDRFTLQLPEEVQRQLV 265          
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Match: ATL38_ARATH (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.069e-36
Identity = 79/187 (42.25%), Postives = 108/187 (57.75%), Query Frame = 1
Query:  274 RGLDQAVIDTFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRGIPVLNAPNDIEAQSEAQPEAHNDAVXXXXXXXXXXKLPISSEPPQVLGLNQTLXXXXXXXXXXXXXXXXXXSHSTGHSLVQPGEDTERYTLRLPEEVRKQL 834
            RGLD+A+I++FPT  YS VK  ++G G +ECAVC+ EFED ETLRL+P+C HVFH +C+  WL+ H+TCP+CR +L  +PG+       LN   D+    E+      D V      +            +V   +Q L                 RSHSTGHS+VQP ++ +R+TLRLPEEVR+QL
Sbjct:   66 RGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDLCLQPGER----SYLNPEPDL---VESTNSHLFDGVTWTNRNRPSRSWSTRLSQCRV---SQIL---------------ISRSHSTGHSVVQPLDNLDRFTLRLPEEVRRQL 227          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan10g092100 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
ATL6_ARATH8.681e-7146.20E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis th... [more]
ATL31_ARATH2.796e-6341.82E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis t... [more]
ATL11_ARATH1.239e-4739.55RING-H2 finger protein ATL11 OS=Arabidopsis thalia... [more]
ATL32_ARATH4.319e-4539.17RING-H2 finger protein ATL32 OS=Arabidopsis thalia... [more]
ATL36_ARATH6.035e-4044.50Putative RING-H2 finger protein ATL36 OS=Arabidops... [more]
ATL15_ARATH6.265e-4040.87E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis t... [more]
ATL9_ARATH5.492e-3939.27E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis th... [more]
ATL34_ARATH2.176e-3844.23RING-H2 finger protein ATL34 OS=Arabidopsis thalia... [more]
ATL37_ARATH1.748e-3740.80Putative RING-H2 finger protein ATL37 OS=Arabidops... [more]
ATL38_ARATH1.069e-3642.25RING-H2 finger protein ATL38 OS=Arabidopsis thalia... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 122..163
e-value: 7.8E-6
score: 35.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 121..164
e-value: 9.1E-14
score: 51.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 122..164
score: 13.079
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 81..169
e-value: 5.8E-21
score: 75.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..318
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 121..164
e-value: 3.23355E-20
score: 80.8171
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 115..170

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g092100; organism=Vigna angularis; type=mRNA; length=1113bp
ATGAAGAACTCAAATGGCTCTAGAGAAAATGGAGGAAGTTACGTTTTTCT
CCTCCTCCCCCTTCTCATCGTTCCTCTTGCGGCTGCACAATCTACAACCA
ATAACCAAAACGAATCGTATTACAACCGCTTCAGCCCTTCCATGGCCATC
ATAATCGTCATCCTCATCGCCGCCGTCTTCCTCATGGGCTTCTTCTCCAT
CTACATCCGCCACTGCGCCGACTCCCCCTCCGCAAGCATCCGCAACCTCA
CCGGAGCCACCTCCCGCCAGCGCCGTGGCCTCGATCAGGCCGTCATCGAC
ACTTTCCCCACGCTGGAGTACTCCGTGGTGAAGATCCACAAGCTTGGAAA
GGGGACGCTGGAGTGCGCGGTGTGCTTAAACGAGTTCGAGGACACCGAAA
CGCTGCGTTTGATCCCTAAGTGCGATCACGTGTTTCACCCGGAGTGCATC
GACGAGTGGCTCGCCTCCCACACTACCTGCCCCGTTTGCCGCGCTAACCT
CGTCCCCGAGCCCGGAGACTCCGTCAGAGGAATTCCGGTTCTCAATGCTC
CTAACGACATCGAGGCCCAATCCGAAGCCCAACCCGAGGCCCACAACGAC
GCCGTCGAGCCTCTTCCCGAACAACAGCAAGAGCCTAAGCTTCCGATTTC
CTCTGAACCCCCTCAAGTGCTCGGCCTAAACCAGACGCTGAACCGGAACC
GCACGAGAGGCTCCCGGTCGGGCCGCCCCCGCCGGTTCCCCCGCTCTCAC
TCGACCGGTCATTCGCTGGTCCAACCCGGCGAGGACACTGAGAGGTACAC
CTTGAGGCTTCCTGAGGAAGTTAGAAAACAGCTACTTCTCAACCCGGAAC
TGCATCGAGCGAGAAGCTTGGTTATGTTGCCCAGGGAAGGTAGTTCGCGG
CGTGGATATCGAACCGGCGAGGGAAGTAGCAGAGGGAGGTCTTCGCGGCG
GTTGGACCGGGGGTTTAAGTCCGACCGCTGGGTTTTCACTATGGCGCCGC
CTTTCTTAGTGAGGGCCTCTTCCGTTAGGTCTCCAAGGGTGGCCAATAAC
GGCGGCGCAGGAATATCTGCTACTGCGCCCTTTCCGCCGCCGGCTGCTGC
GGATTCTGTTTGA
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protein sequence of LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1

>LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=370bp
MKNSNGSRENGGSYVFLLLPLLIVPLAAAQSTTNNQNESYYNRFSPSMAI
IIVILIAAVFLMGFFSIYIRHCADSPSASIRNLTGATSRQRRGLDQAVID
TFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECI
DEWLASHTTCPVCRANLVPEPGDSVRGIPVLNAPNDIEAQSEAQPEAHND
AVEPLPEQQQEPKLPISSEPPQVLGLNQTLNRNRTRGSRSGRPRRFPRSH
STGHSLVQPGEDTERYTLRLPEEVRKQLLLNPELHRARSLVMLPREGSSR
RGYRTGEGSSRGRSSRRLDRGFKSDRWVFTMAPPFLVRASSVRSPRVANN
GGAGISATAPFPPPAAADSV
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mRNA from alignment at Chr_10-CM003380.1:11282719..11283831-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g092100; organism=Vigna angularis; type=mRNA; length=1113bp; location=Sequence derived from: Chr_10-CM003380.1:11282719..11283831- (Vigna angularis
ATGAAGAACTCAAATGGCTCTAGAGAAAATGGAGGAAGTTACGTTTTTCT CCTCCTCCCCCTTCTCATCGTTCCTCTTGCGGCTGCACAATCTACAACCA ATAACCAAAACGAATCGTATTACAACCGCTTCAGCCCTTCCATGGCCATC ATAATCGTCATCCTCATCGCCGCCGTCTTCCTCATGGGCTTCTTCTCCAT CTACATCCGCCACTGCGCCGACTCCCCCTCCGCAAGCATCCGCAACCTCA CCGGAGCCACCTCCCGCCAGCGCCGTGGCCTCGATCAGGCCGTCATCGAC ACTTTCCCCACGCTGGAGTACTCCGTGGTGAAGATCCACAAGCTTGGAAA GGGGACGCTGGAGTGCGCGGTGTGCTTAAACGAGTTCGAGGACACCGAAA CGCTGCGTTTGATCCCTAAGTGCGATCACGTGTTTCACCCGGAGTGCATC GACGAGTGGCTCGCCTCCCACACTACCTGCCCCGTTTGCCGCGCTAACCT CGTCCCCGAGCCCGGAGACTCCGTCAGAGGAATTCCGGTTCTCAATGCTC CTAACGACATCGAGGCCCAATCCGAAGCCCAACCCGAGGCCCACAACGAC GCCGTCGAGCCTCTTCCCGAACAACAGCAAGAGCCTAAGCTTCCGATTTC CTCTGAACCCCCTCAAGTGCTCGGCCTAAACCAGACGCTGAACCGGAACC GCACGAGAGGCTCCCGGTCGGGCCGCCCCCGCCGGTTCCCCCGCTCTCAC TCGACCGGTCATTCGCTGGTCCAACCCGGCGAGGACACTGAGAGGTACAC CTTGAGGCTTCCTGAGGAAGTTAGAAAACAGCTACTTCTCAACCCGGAAC TGCATCGAGCGAGAAGCTTGGTTATGTTGCCCAGGGAAGGTAGTTCGCGG CGTGGATATCGAACCGGCGAGGGAAGTAGCAGAGGGAGGTCTTCGCGGCG GTTGGACCGGGGGTTTAAGTCCGACCGCTGGGTTTTCACTATGGCGCCGC CTTTCTTAGTGAGGGCCTCTTCCGTTAGGTCTCCAAGGGTGGCCAATAAC GGCGGCGCAGGAATATCTGCTACTGCGCCCTTTCCGCCGCCGGCTGCTGC GGATTCTGTTTGA
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Coding sequence (CDS) from alignment at Chr_10-CM003380.1:11282719..11283831-

>LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g092100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g092100; organism=Vigna angularis; type=CDS; length=1113bp; location=Sequence derived from: Chr_10-CM003380.1:11282719..11283831- (Vigna angularis
ATGAAGAACTCAAATGGCTCTAGAGAAAATGGAGGAAGTTACGTTTTTCT
CCTCCTCCCCCTTCTCATCGTTCCTCTTGCGGCTGCACAATCTACAACCA
ATAACCAAAACGAATCGTATTACAACCGCTTCAGCCCTTCCATGGCCATC
ATAATCGTCATCCTCATCGCCGCCGTCTTCCTCATGGGCTTCTTCTCCAT
CTACATCCGCCACTGCGCCGACTCCCCCTCCGCAAGCATCCGCAACCTCA
CCGGAGCCACCTCCCGCCAGCGCCGTGGCCTCGATCAGGCCGTCATCGAC
ACTTTCCCCACGCTGGAGTACTCCGTGGTGAAGATCCACAAGCTTGGAAA
GGGGACGCTGGAGTGCGCGGTGTGCTTAAACGAGTTCGAGGACACCGAAA
CGCTGCGTTTGATCCCTAAGTGCGATCACGTGTTTCACCCGGAGTGCATC
GACGAGTGGCTCGCCTCCCACACTACCTGCCCCGTTTGCCGCGCTAACCT
CGTCCCCGAGCCCGGAGACTCCGTCAGAGGAATTCCGGTTCTCAATGCTC
CTAACGACATCGAGGCCCAATCCGAAGCCCAACCCGAGGCCCACAACGAC
GCCGTCGAGCCTCTTCCCGAACAACAGCAAGAGCCTAAGCTTCCGATTTC
CTCTGAACCCCCTCAAGTGCTCGGCCTAAACCAGACGCTGAACCGGAACC
GCACGAGAGGCTCCCGGTCGGGCCGCCCCCGCCGGTTCCCCCGCTCTCAC
TCGACCGGTCATTCGCTGGTCCAACCCGGCGAGGACACTGAGAGGTACAC
CTTGAGGCTTCCTGAGGAAGTTAGAAAACAGCTACTTCTCAACCCGGAAC
TGCATCGAGCGAGAAGCTTGGTTATGTTGCCCAGGGAAGGTAGTTCGCGG
CGTGGATATCGAACCGGCGAGGGAAGTAGCAGAGGGAGGTCTTCGCGGCG
GTTGGACCGGGGGTTTAAGTCCGACCGCTGGGTTTTCACTATGGCGCCGC
CTTTCTTAGTGAGGGCCTCTTCCGTTAGGTCTCCAAGGGTGGCCAATAAC
GGCGGCGCAGGAATATCTGCTACTGCGCCCTTTCCGCCGCCGGCTGCTGC
GGATTCTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD